NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105531

Metagenome / Metatranscriptome Family F105531

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105531
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 114 residues
Representative Sequence MKKIILASAFAAAVAMGLPMAAQADTKVKVYLGMPHYGYQVGPDYRFREGYGWYRPVGIYRGRLSCGEARARVRHSGFRNVATIECNGRTYTFEATRRGRDVTVYVNSRTGAIWRG
Number of Associated Samples 71
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 65.00 %
% of genes near scaffold ends (potentially truncated) 36.00 %
% of genes from short scaffolds (< 2000 bps) 92.00 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(38.000 % of family members)
Environment Ontology (ENVO) Unclassified
(42.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(36.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 15.28%    β-sheet: 23.61%    Coil/Unstructured: 61.11%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01594AI-2E_transport 4.00
PF01568Molydop_binding 3.00
PF05239PRC 2.00
PF04879Molybdop_Fe4S4 2.00
PF13670PepSY_2 2.00
PF03631Virul_fac_BrkB 1.00
PF13426PAS_9 1.00
PF00892EamA 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 4.00
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.00 %
UnclassifiedrootN/A3.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_102276483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales770Open in IMG/M
3300004463|Ga0063356_104050393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales631Open in IMG/M
3300004779|Ga0062380_10237744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum → Ochrobactrum sp. CDB2750Open in IMG/M
3300005440|Ga0070705_100910063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria708Open in IMG/M
3300005441|Ga0070700_100774960All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria770Open in IMG/M
3300005455|Ga0070663_101344903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales631Open in IMG/M
3300005459|Ga0068867_101855492All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 2MFCol3.1568Open in IMG/M
3300005617|Ga0068859_101932154All Organisms → cellular organisms → Bacteria → Proteobacteria652Open in IMG/M
3300005841|Ga0068863_102519641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales524Open in IMG/M
3300005844|Ga0068862_100387744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1304Open in IMG/M
3300006046|Ga0066652_100758113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium926Open in IMG/M
3300006051|Ga0075364_10992188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales571Open in IMG/M
3300006177|Ga0075362_10079413All Organisms → cellular organisms → Bacteria → Proteobacteria1510Open in IMG/M
3300006178|Ga0075367_10220418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium1187Open in IMG/M
3300006195|Ga0075366_10776847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. PDO1-076596Open in IMG/M
3300006195|Ga0075366_11040593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. PDO1-076511Open in IMG/M
3300007004|Ga0079218_13298580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales546Open in IMG/M
3300009032|Ga0105048_11119604All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria654Open in IMG/M
3300009148|Ga0105243_11682489All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales663Open in IMG/M
3300009148|Ga0105243_12397801Not Available566Open in IMG/M
3300009553|Ga0105249_10316131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1572Open in IMG/M
3300010044|Ga0126310_10977022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales665Open in IMG/M
3300010166|Ga0126306_11509081Not Available558Open in IMG/M
3300010400|Ga0134122_10784739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales907Open in IMG/M
3300010400|Ga0134122_12536296All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria562Open in IMG/M
3300010403|Ga0134123_10561789All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis1088Open in IMG/M
3300012043|Ga0136631_10302656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria637Open in IMG/M
3300012668|Ga0157216_10092402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1477Open in IMG/M
3300012668|Ga0157216_10469800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales545Open in IMG/M
3300015360|Ga0163144_10060665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6536Open in IMG/M
3300015360|Ga0163144_10251362All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2342Open in IMG/M
3300017789|Ga0136617_10076063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2932Open in IMG/M
3300017789|Ga0136617_10109983All Organisms → cellular organisms → Bacteria2379Open in IMG/M
3300018051|Ga0184620_10168015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales717Open in IMG/M
3300018066|Ga0184617_1082497All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria874Open in IMG/M
3300018429|Ga0190272_10081648All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2004Open in IMG/M
3300018429|Ga0190272_10117962All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1751Open in IMG/M
3300018429|Ga0190272_10205978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1427Open in IMG/M
3300018429|Ga0190272_10348421All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1178Open in IMG/M
3300018429|Ga0190272_10725116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales900Open in IMG/M
3300018429|Ga0190272_12102373All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria602Open in IMG/M
3300018920|Ga0190273_12181251All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria520Open in IMG/M
3300019269|Ga0184644_1277819All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria871Open in IMG/M
3300019377|Ga0190264_10469264All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales847Open in IMG/M
3300019377|Ga0190264_10728706All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria739Open in IMG/M
3300019377|Ga0190264_11929992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales538Open in IMG/M
3300019487|Ga0187893_10051027All Organisms → cellular organisms → Bacteria4190Open in IMG/M
3300021947|Ga0213856_1078094All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1083Open in IMG/M
3300021947|Ga0213856_1162683All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1118Open in IMG/M
3300021951|Ga0222624_1004980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria621Open in IMG/M
3300022222|Ga0226658_10393178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales621Open in IMG/M
3300022756|Ga0222622_10206118All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis1308Open in IMG/M
3300022917|Ga0247777_1197673Not Available652Open in IMG/M
3300025313|Ga0209431_10323986All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1202Open in IMG/M
3300025325|Ga0209341_10231799All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1537Open in IMG/M
3300025935|Ga0207709_11671778All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales529Open in IMG/M
3300025942|Ga0207689_10398903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1146Open in IMG/M
3300025972|Ga0207668_10221065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1521Open in IMG/M
3300026067|Ga0207678_11534826All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales587Open in IMG/M
3300026075|Ga0207708_11005437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales725Open in IMG/M
3300026088|Ga0207641_12579648All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales506Open in IMG/M
3300026089|Ga0207648_11296426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales684Open in IMG/M
3300028380|Ga0268265_11364978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales710Open in IMG/M
3300030829|Ga0308203_1050733All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria629Open in IMG/M
3300030902|Ga0308202_1036709All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales851Open in IMG/M
3300030902|Ga0308202_1108172All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales582Open in IMG/M
3300030902|Ga0308202_1114980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales570Open in IMG/M
3300030902|Ga0308202_1149668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales519Open in IMG/M
3300030903|Ga0308206_1049561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales829Open in IMG/M
3300030903|Ga0308206_1155119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales554Open in IMG/M
3300030903|Ga0308206_1205239All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria501Open in IMG/M
3300030905|Ga0308200_1075713All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales677Open in IMG/M
3300030993|Ga0308190_1095351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria645Open in IMG/M
3300030993|Ga0308190_1188175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales513Open in IMG/M
3300031058|Ga0308189_10132092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales835Open in IMG/M
3300031058|Ga0308189_10238285All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales680Open in IMG/M
3300031058|Ga0308189_10338368All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria602Open in IMG/M
3300031092|Ga0308204_10337621All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales515Open in IMG/M
3300031093|Ga0308197_10118791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales808Open in IMG/M
3300031093|Ga0308197_10356628All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales558Open in IMG/M
3300031093|Ga0308197_10450633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria516Open in IMG/M
3300031094|Ga0308199_1192902All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales509Open in IMG/M
3300031096|Ga0308193_1092841All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales509Open in IMG/M
3300031114|Ga0308187_10466405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales513Open in IMG/M
3300031114|Ga0308187_10499272All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales500Open in IMG/M
3300031123|Ga0308195_1026168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales746Open in IMG/M
3300031123|Ga0308195_1033631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales686Open in IMG/M
3300031123|Ga0308195_1069765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria543Open in IMG/M
3300031123|Ga0308195_1086816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales507Open in IMG/M
3300031455|Ga0307505_10008020All Organisms → cellular organisms → Bacteria5559Open in IMG/M
3300031455|Ga0307505_10053392All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1797Open in IMG/M
3300031548|Ga0307408_101545170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales629Open in IMG/M
3300031730|Ga0307516_10435478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales968Open in IMG/M
3300031731|Ga0307405_10719862All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales828Open in IMG/M
3300031847|Ga0310907_10654314All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales577Open in IMG/M
3300031911|Ga0307412_10650966All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales899Open in IMG/M
3300032002|Ga0307416_100819907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1027Open in IMG/M
3300032126|Ga0307415_100747107All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales888Open in IMG/M
3300032420|Ga0335397_10035499All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5653Open in IMG/M
3300034194|Ga0370499_0160044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales589Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil38.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.00%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere5.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.00%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat3.00%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand3.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.00%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater2.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.00%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.00%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.00%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.00%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.00%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks1.00%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.00%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004779Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3FreshEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006177Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2Host-AssociatedOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006195Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009032Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012043Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)EnvironmentalOpen in IMG/M
3300012668Arctic soils microbial communities. Combined Assembly of 23 SPsEnvironmentalOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300017789Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)EnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300021947Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - G-2016_32 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022222Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022917Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031096Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031123Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032420Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)EnvironmentalOpen in IMG/M
3300034194Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10227648323300000956SoilSAFAAALAMGLPMAAQADTKVKVYLGVPHYGYQVGPDYLYRDGYGWYRPIGVHRGRISCGEARRLVRNKGFRNVETIECNGRTYTFEATRRGRDVTVFVNSRTRAVWRG*
Ga0063356_10405039313300004463Arabidopsis Thaliana RhizosphereMKKIVLASVFAAALAMGLPLAAEAHSNVRVYFGMPHYGYQVGPDYRFRDGYGWYRPVGIYRGRLSCGEARRVVRNSGFRNVATIECNGRTYTFEATRR
Ga0062380_1023774413300004779Wetland SedimentMKGFFLATAAAVTLAFAMPTAADAKVRIYLGFPHYDYQPGPDYRYRDGYGWYRPVYGYNRGRLSCGEAKRAVRNNGFRNVNTIECNGRTYTFEATRRGRDVTVFVDSRTGRISRG*
Ga0070705_10091006313300005440Corn, Switchgrass And Miscanthus RhizosphereMKSLILASAFAASMALALPTAAEAKVVVYFGTPYYDYQFGPDYRFREGYGWYRPMGFFGHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRTGAVWRG*
Ga0070700_10077496013300005441Corn, Switchgrass And Miscanthus RhizosphereMKSLILASAFAASMALALPTAAEAKVVVYFGVPYYDYQFGPDYRFREGYGWYRPNAFSIHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRG
Ga0070663_10134490313300005455Corn RhizosphereMKKLIFASAFAAALAMGLPMAAQADTKVKVYLGLPHYGYQVGPDYRFREGYGWYRPVAVYNRGRVSCGEARRIVRNSGFRNVATIECQGRTYTFEATRRG
Ga0068867_10185549213300005459Miscanthus RhizosphereMKSLILASAFAASMALALPTAAEAKGVVYFGVPYYDYQFGPDYRFREGYGWYRPNAFSIHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRT
Ga0068859_10193215413300005617Switchgrass RhizosphereMKSLILASAFAASMALALPTAAQAKVVVYFGTPYYDYQFGPDYRFREGYGWYRPMGFFGHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRTGAVWRG*
Ga0068863_10251964113300005841Switchgrass RhizosphereSMALALPTAAEAKVVVYFGTPYYDYQFGPDYRFREGYGWYRPMGFFGHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRTGAVWRG*
Ga0068862_10038774423300005844Switchgrass RhizosphereMRGVRKERRFNMKSLILASAFAASMALALPTAAEAKVVVYFGTPYYDYQFGPDYRFREGYGWYRPMGFFGHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRTGAVWRG*
Ga0066652_10075811323300006046SoilMKSLFLASAAAVVMALALPTAADAKTSVRVFLGVPYYDYQYGPDYRFRVGSGWYAPVGIYNRGRISCGEARRIVRGSGFRNVATIECNGRTYTFEATRRGRDVTVFVNSRTGAVWRG*
Ga0075364_1099218823300006051Populus EndosphereMKSIFLTAVFAAAFAVGLPAVAEAKTNVKIYFGVPHYSYRVGPDYRFRDGYGWYRSSAIHRGRLSCGDAKRRVRNSGFRNVSTIECQGRTYTFEATRRGRDVT
Ga0075362_1007941323300006177Populus EndosphereMKSIILTAVFAAALAVGLPATAEAKTNVKIYFGVPHYSYRVGPDYHFRDGYGWYRPATIDRGRLSCGEAKWRVRNSGFRNVSTIECRGRTYTFEATRRGRDIIVYVNSRTGEVWRG*
Ga0075367_1022041823300006178Populus EndosphereMKGFFIASAVAATLAFGMPTAVEAAKVKIYLGMPHYGYQVGPDYRFRSGYGWYQDRNYYSRGRLSCGEARRIVRSNGFRNVNTIECNGRTYTFEATRRGRDVTVFVNSKNGRIWRG*
Ga0075366_1077684713300006195Populus EndosphereMKGFFIASAVAATLAFGMPTAVEAAKVKIYLGMPHYGYQVGPDYRFRSGYGWYQDRNYYSRGRLSCGEARRIVRSNGFRNVNTIECNGRTYTFEATRRGRDVTVFVNSKNGRIWRGLERVGSAVAFNRVDIPEAIAANNP
Ga0075366_1104059313300006195Populus EndosphereMKKLILASAFAAAIAVGMPLTAEAKTSVKIYLGVPHYSYQVGPDYRFRSGYGWYRPIGVSMRGRLSCGEARARVRHSGFRNVSTIECQGRTYTFEATRRGRDVTVFVNSRTGAVWRG*
Ga0079218_1329858013300007004Agricultural SoilMKKIVLASVFAAALAMGLPLAAEAHSNVRVYFGMPHYGYQVGPDYRFRDGYGWYRPVGIYRGRLSCGEARARVRNRGFRNVATIECNGRTYTFEATRRGRDVTVFVNSRTGAVWRG*
Ga0105048_1111960413300009032FreshwaterMKGFFLASAVAVTLALGMSTAADAKVKIYLGVPHYDYQYGPDYRFREGYGWYQYSGYNDYNRGRLSCGEARRVVRNNGYRNVNTIECRGPTYTFEATRRGRDVTVFVNSRNGRMWRG*
Ga0105243_1168248923300009148Miscanthus RhizosphereAEPFQPIPVFPSNERGAQRTEFVMKSLILASAFAASMALALPTAAEAKVVVYFGVPYYDYQFGPDYRFREGYGWYRPNAFSIHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRTGAVWRG*
Ga0105243_1239780123300009148Miscanthus RhizosphereMKNLFLATAFAASLAAFGLPSEAEAKVVVYLGMPHYDYRVGPEYRFRDGYGWYMPGGFYGYGKLSCGEAKWRVRERGFRNVRTIECDGRTYTFKA
Ga0105249_1031613113300009553Switchgrass RhizosphereMKSLILASAFAASMALALPTAAEAKVVVYFATPYYDYQFGPDYRFREGYGWYRPMGFFGHGRLSCGEAKWRVRERGFRNVSTIECQGRVYTFKARRGDHRVIVYVNSRSGAVWRG*
Ga0126310_1097702213300010044Serpentine SoilAFAAAFAMGIPVAAEAKTNVKVFLGVPYYDYQYGPDYRFREGYGWYQPRGYFNRGRLSCGEARWRVRSSGFRNVSTVECNGRTYTFEATRRGRDVIVYVNSKTGAIWRG*
Ga0126306_1150908113300010166Serpentine SoilRSFIMKSLFLAAAAAAVMAFAVPTTAQAGVKVYLGVPHYDYRVGPSWRYREGYGWYDPIIVYDRGRISCREAKRIVRSSGFRNVQTSECNGRTYTFEATRRGRDVTVFVNSRTGAVWRG*
Ga0134122_1078473923300010400Terrestrial SoilMKSLILASAFAASMALALPTAAEAKVVVYFGTPYYDYQFGPDYRFREGYGWYRPMGFFGHGRLSCGEAKRRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRTGAVWRG*
Ga0134122_1253629613300010400Terrestrial SoilLTAAVAATLAFAIPTAVEAANVKIYLGMPHYSYQVGPDYRFREGYGWYRYSGYNNDFNRGRLSCGEARRIVRNNGFRNVATIECNGRTYTFEATRRGRDVTVFVNSRNGRIWRG*
Ga0134123_1056178923300010403Terrestrial SoilLWTIFLFSPEIKPLRNLSGTSEFFLSMRGVRKERRFNMKSLILASAFAASMALALPTAAEAKVVVYFGVPYYDYQFGPDYRFREGYGWYRPNAFSIHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRIGAVWRG*
Ga0136631_1030265613300012043Polar Desert SandMKRLLIASAFAASLVLGFSPTADAAVKLGIFFGVPHYDYQVGPDYRYRTGYGWYHHGGYGNYGRLSCREAKRQVRASGFRNVSTIECNGRTYTFEATNRRGRDITVFVDSRSGRVWRG*
Ga0157216_1009240233300012668Glacier Forefield SoilMKKLFLASAFAAAVAIGMPMAAEAHSNVKVYLGMSHYGYQVGPDYRFRSGYGWYRPVGIHRGQLSCGEARRTVRNSGFRNVSTIECNGRTYTFEATRRGRDVTVFVNSRTGAIWRG*
Ga0157216_1046980013300012668Glacier Forefield SoilPVAAEAKTNVQIYLGMPHYGYQVGPDYRFRSGHGWYRPVGINRGRLSCGEARSRVRNNGFRNVATIECQGRTYTFEATRRGRDVTVYVNSRTGAIWRG*
Ga0163144_1006066563300015360Freshwater Microbial MatMKSIILASAFAAALAMGLPVAAEANTNVQIYLGMPHYGYQVGPDYRFRSGHGWYRPVGVNRGRLSCGEARSRVRNNGFRNVATIECQGRTYTFEATRRGRDVTVYVNSRTGAIWRG*
Ga0163144_1025136233300015360Freshwater Microbial MatMKSLFLATAVAATMMFAMPLAADAKTNVQIYFGVPHYGYQVGPDYRYRQGYGWYQDSGYNNYNRGRLSCGDARRVVRNSGYRNVSTIECQGRTYTFEATRRGRDVTVFVNSRNGRIWRS*
Ga0136617_1007606323300017789Polar Desert SandMKRLILASAFAVSMVLGLSPAADAKIKVGIFFGVPHYDYQVNPDYRFRRGYGWYRDDRRGYGRLSCGEARRQVRNSGFRNVSTIECNGRTYTFEATRRGRDIVVYVDSKTGRVWRG
Ga0136617_1010998323300017789Polar Desert SandMKRLILASAFAVSMVLGLSPAADAKIKVGIFFGVPHYDYQVNPDYRFRRGYGWYRDDRRGYGRLSCGEARRQVRNSGFRNVSTIECNGRTYTFEATRRGRDILVYVDSKTGRVWRG
Ga0184620_1016801523300018051Groundwater SedimentMKSLILASAFAASMALALPTAAEAKIVIYLGAPHYSYQVGPDYRYRSGYGWYLPNSFSIRGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFRARRGDHRVIVYVNSRSGAVWRG
Ga0184617_108249723300018066Groundwater SedimentMKSLFLASAAAVVMALALPTAADAKTKVKVFLGVPYYDYQYGPDYRFREGYGWYQYGDYGGYNDGFNRGRLSCGEARRIVRNNGFRNVATIECNGRLYTFEATRHGRDVTVFVNSRNGRISRG
Ga0190272_1008164823300018429SoilMKKIILASAFAAAIAMGLPLAAQADTNFRVYLGMPHYGYQVGPDYRFRDGYGWYRPVGIHRGRLSCGEARRAVRNSGFRNVATIECNGRTYTFEATRRGRDVKVFVNSRTGDIWRG
Ga0190272_1011796233300018429SoilMKKLFLASAFAAALAMGLPMAAQADTKVRVYLGLPHYGYQVGPDYRFRDGYGWYRPVGVYNRGRLSCGEARSKVRRSGFRNVDTIECKGRTYTFEATRRGRDVTVFVDSRNGRIWRG
Ga0190272_1020597833300018429SoilMKGLFLATAVAATLAFAMPTAADAKVQIYLGFPHYDYQVGPDYRYRDGYGWYRPTGYYNRGRLSCGEARRAVRNNGFRNVNAIECNGRTYTFEATRRGRDVTVFVDSRNGRVWRG
Ga0190272_1034842133300018429SoilMKKIFLASAFAAALAMGIPLGAEAKTNVMIHLGIPHYGYQVGPDYRFRDGYGWYRPIGINRGRLSCGEARRVVRNSGFRNVATIECNGRTYTFEATRRGRDVTVFVNSRTGAVRRG
Ga0190272_1072511623300018429SoilMKKLFLASAFAAALAMGLPMAAQADTKVRVYLGLPHYGYQVGPDYRFRDGYGWYRPVGVYNRGRLSCGEARSKVRRSGFRNVDTIECRGRTYTFEATRRGRDVTVYVNSWTGAIWRG
Ga0190272_1210237323300018429SoilAMPTAADAKVQIYLGFPHYDYQVGPDYRYRDGYGWYRPTGYYNRGRLSCGEARRAVRNNGFRNVATIECNGRTYTFEATRRGRDVTVFVDSRNGRVWRG
Ga0190273_1218125113300018920SoilMKGLLFASAVAATLALGMSTAADAKVKIYFGVPHYDYQYGPDYRFREGYGWYRYSGYNNNYNRGRLSCGEARRVVRNNGYRNVNTIECNGPTYTFEATRRGRDVTVFVNSRNGRMWRS
Ga0184644_127781913300019269Groundwater SedimentMKSLFLAAVAATMMFAMPPAADAAKVKIYLGVPHYGYQVGPDYRFREGYGWYQYSDYNNGFNRGRLSCGEARRIVRNNGFRNVATIECNGRMYTFEATRHGRDVTVFVNSRNGRISRG
Ga0190264_1046926413300019377SoilQADTKVKVYLGLDHYGYQVGPDYRFREGYGWYRPVAVYNRGRLSCGEARARVRNSGFRNVATIECQGRTYTFEATRRGRDVTVFVNSRTGALWRG
Ga0190264_1072870623300019377SoilMKGLLFASAVAATLALGMSTAADAKVKIYFGVPHYDYQYGPDYRFREGYGWYRYSGYNNNYNRGRLSCGEARRVVRNNGYRNVNTIECNGPTYT
Ga0190264_1192999213300019377SoilDTKVKVYLGLPHYGYQVGPDYRFREGYGWYRPVAVYNRGRISCGEARRIVRGSGFRNVATIECNGRTYTFEATRRGRDVTVFVNSRTGAVWRG
Ga0187893_1005102733300019487Microbial Mat On RocksMKSLFLATAAVAATLAFAMPTTADAKVKIYFGMPHYDYQYGPDYRYRDGYGWYQDSRYYNNNRGRLSCGEARRVVRNSGFRNVSTIECNGRTYTFEATRRGRDVTVFVDSRSGRISRG
Ga0213856_107809423300021947WatershedsMNRLILATAFASTLAFALPLAAEAEAKTSVQIFLGVPHYNYQVGPDYRFRTGHGWYRSMNRNRLTCNEARREVRDSGYRRVRTIECRGATYTFRAIRRGNPVVVYVNSRTGSVWRG
Ga0213856_116268313300021947WatershedsMNRLILATAFAASLAFALPTAAEAKTNVQIFFGIPHYDYQVGPDYRFRDGYGWYRPAYRGRLSCNQAKRQVLNRGFRRVSTIECRGSTYTFRAIRRGDPVRVYVNARTGAVWRG
Ga0222624_100498023300021951Groundwater SedimentAATMMLAMPLAADAAKVKIYLGVPHYSYQVGPDYRFREGYGWYQYGDYNDGYNRGRLSCGEARRIVRSNGFRNVATIECNGRLYTFEATRHGRDVTVFVNSRNGRISRG
Ga0226658_1039317813300022222Freshwater Microbial MatMKSIILASAFAAALAMGLPVAAEANTNVQIYLGMPHYGYQVGPDYRFRSGHGWYRPVGVKRGRLSCGEARSQVRNNGFRNVATIECQGRTYTFEATRRGRDVTVYVNSRTGAVWRG
Ga0222622_1020611823300022756Groundwater SedimentMKSLILASAFAASMALALPTAAEAKIVVYLGTPHYDYRVGPDYRYRSGYGWYLPNSFSIRGRLSCGEAKWRVRERGFRNVSTIECNGRTYTFRARRGDHRVIVYVNSRSGAVWRG
Ga0247777_119767323300022917Plant LitterMKGFFIASAVAATLAFGMPTAVEAAKVKIYLGMPHYGYQVGPDYRFRSGYGWYQDRNYYSRGRLSCGEARRIVRSNGFRNVNAIECNGRTYTFEATRRGRDVTVFVNSKNGRIWRG
Ga0209431_1032398633300025313SoilMKSLFLATAFAASLAFALPGEAEAKVVIYFGMPHYDYRVGPDYRYRDGYGWYRPGFYNRGRLSCGEAKWRVRNRGYRNVDTIECRGRTYTFEASRRGNRI
Ga0209341_1023179943300025325SoilMKSLFLATAFAASLAFALPGEAEAKVVIYFGMPHYDYRVGPDYRYRDGYGWYRPGFYNRGRLSCGEAKWRVRNRGYRNVDTIECRGRTYTFEASRRGNRIIVYVDSRSGRVWRG
Ga0207709_1167177823300025935Miscanthus RhizosphereMKSLILASAFAASMALALPTAAEAKVVVYFGVPYYDYQFGPDYRFREGYGWYRPNAFSIHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRV
Ga0207689_1039890323300025942Miscanthus RhizosphereMKSLILASAFAASMALALPTAAEAKVVVYFGTPYYDYQFGPDYRFREGYGWYRPMGFFGHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRTGAVWRG
Ga0207668_1022106513300025972Switchgrass RhizosphereMKSLILVSAFAASMALALPTAAEAKVVVYFGVPYYDYQFGPDYRFREGYGWYRPNAFSIHGRLSCGEAKWRVRERGFRNVSTIECNGRTYTFKARRGDHRVIVYVNSRTGAVWRG
Ga0207678_1153482613300026067Corn RhizosphereMKKLIFASAFAAALAMGLPMAAQADTKVKVYLGLPHYGYQVGPDYRFREGYGWYRPVAVYNRGRVSCGEARRIVRNSGFRNVATIECQGRTYTFEATRRGRDVTVYVNS
Ga0207708_1100543723300026075Corn, Switchgrass And Miscanthus RhizosphereMKSLILASAFAASMALALPTAAEAKVVVYFGVPYYDYQFGPDYRFREGYGWYRPNAFSIHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRTGAVWRG
Ga0207641_1257964813300026088Switchgrass RhizosphereILASAFAASMALALPTAAEAKVVVYFGVPYYDYQFGPDYRFREGYGWYRPNAFSIHGRLSCGEAKWRVRERGFRNVSTIECNGRTYTFKARRGDHRVIVYVNSRTGAVWRG
Ga0207648_1129642623300026089Miscanthus RhizosphereMKSLILASAFAASMALALPTAAEAKGVVYFGVPYYDYQFGPDYRFREGYGWYRPNAFSIHGRLSCGEAKWRVRERGFRNVSTIECDGRTYTFKARRGDHRVIVYVNSRTGAVWRG
Ga0268265_1136497813300028380Switchgrass RhizosphereMKSLILASAFAASMALALPTAAEAKVVVYFGTPYYDYQFGPDYRFREGYGWYRPMGFFGHGRLSCGEAKWRVRERGFRNVSTIECDGRTY
Ga0308203_105073323300030829SoilMKSLFLASAAAVVMALALPTAADAKTKVKVFLGVPYYDYQYGPDYRFREGYGWYQYGDYGGYNDGFNRERLSCGEARRIVRNNGFRNVATIECNGRLYTFEATRHGRDVTVFVNSRN
Ga0308202_103670923300030902SoilLAMKKILLASAFAAAFAMGIPLAAEAKTNVKVFLGVPYYDYQYGPDYRFREGYGWYQPRGYFNRGRLSCGEARWRVRSSGFRNVSTVECNGRTYTFEATRRGRDVIVYVNSRTGAIWRG
Ga0308202_110817223300030902SoilMKKIILASAFAAALAVGLPMAAQADTKVKVYLGMPHYGYQVGPDYRFREGYGWYRPIGIYRGRLSCGEARARVRHSGFRNVATIECQGRTYTFEATRRGRDVIVYVNSRTGDIWRG
Ga0308202_111498013300030902SoilMKSLFLATAAAVVMALALPTAADAKTKVKVFLGVPYYDYQYGPDYRFREGYGWYQYSDYNNGYNRGRLSCGEAKWRVRNSGFRNVSTIECNGRTYTFEATRRGRDVTVFVDSRTGRISRG
Ga0308202_114966813300030902SoilMKKVILASAFAAALAMGLPMAAQADTKVKVYLGMPHYGYQVGPDYRFREGYGWYRPVGIYRGRLSCGEARARVRHSGFRNVATIECQGRTYTFEATRRGRDVIVYVNSRTGDIWRG
Ga0308206_104956113300030903SoilMKSLYFASALAAAIAIAIPTAVEAKTNVKIYLGMPHFGYQVGPDYRYRQGYGWYLPSGIHGRLSCGEAKARVRDHGFRNVSTIECDGRTYTFRARRGDHRVIVYVNSRSGNVWPG
Ga0308206_115511923300030903SoilMKSLFLATAFAASLALGLPSEAEAKVVIYLGMPHYDYRVGPDYRFREGYGWYRPNAFFIRGRLSCGEAKWRVRASGFRNVSTIECDGRTYTFRARRGDHRVIVYVNSRSGAVWRG
Ga0308206_120523913300030903SoilMKSLFLAAAAAVVMTFALPTAADAKTNVKIYLGAPHYDYQVGPGWRYREGYGWYDYERYGQYDPIVIHRGRISCGEARRIVRNSGFRNVETIECNGRTYTFEATRRGRDVTVFVNSRNGRLWRG
Ga0308200_107571323300030905SoilMKKIIFTSAFAAALAMGLPMAAQADTKVKVYLGLPHYSYQVGPDYRFRQGYGWYRPVGIYRGRLSCGEARARVRHSGFRNVATIECQGRTYTFEATRRGRDVTVYVNSRTGDIWRG
Ga0308190_109535123300030993SoilMKNLFLATAAAATMMLAMPLAADAAKVKIYLGVPHYSYQVGPDYRFREGYGWYQYSDYNDGFNRGRLSCGEARRIVRNNGFRNVATIECNGRMYTFEATRHGRDVTVFVNSRNGRISRG
Ga0308190_118817523300030993SoilLPLAAEAKTSVKVYFGVPYYDYQYGPDYRFRENYGWYQPMGHYNRGRLSCGEAKWRVRNSGFRNVSTIECNGRTYTFEATRRGRDVTVYVNSRTGAIWRG
Ga0308189_1013209213300031058SoilMKKIILASAFAAAIAMGLPLAAEAKTNVKIYLGLPHYSYQVGPEYRYRAGYGWYMPVGINRGRLSCGEARARVRHSGFRNVATIECQGRTYTFEATRRGRDVTVYVNSRTGAIWRG
Ga0308189_1023828523300031058SoilMKSLLLASIFAATMAFSLPTVAEAKVVIYLGMPHYSYRVGPDYRFREGFGWYRPNAFYLRGRLSCGEAKWRVRSRGYDNVSTIECNGSTYTFRARRGDHRVTVFVNSRSGAIWRG
Ga0308189_1033836823300031058SoilMKSLFLASAAAVVMALALPTAADAKTKVKVFLGVPYYDHQYGPDYRFREGYGWYQYGDYGGYNDGFNRGRLSCGEARRIVRNNGFRNVATIECNGRLYTFEATRHGRDVTVFVNSRNGRISRG
Ga0308204_1033762123300031092SoilMKSLYFASALAAAIAIAIPTAVDAKTNVKIYLGMPHFGYQVGPDYRYRQGYGWYLPSGIHGRLSCGAAKARVRDHGFRNVSTIECDGRTYTFRARRGDHRVIVYVNSRSGNVWPG
Ga0308197_1011879123300031093SoilAMKKIILASAFAAAIAMGLPLAAEAKTNVKIYLGLPHYSYQVGPEYRYRAGYGWYMPVGINRGRLSCGEARARVRHSGFRNVATIECQGRTYTFEATRRGRDVTVYVNSRTGAIWRG
Ga0308197_1035662813300031093SoilMKKILLASAFAAAFAMGLPLAAEAKTNVQVYFGVPYYDYQYGPDYRFRQGYGWYQPRGYYNRGRLSCGEAKWRVRNSGFRNVSTVECNGRTYTFEATRRGRDVIVYVNSRTGAIWRG
Ga0308197_1045063313300031093SoilMKGFFLATAVAATMMLAMPLAADAAKVRIYLGMPHYSYQVGPDYRFREGYGWYQYNGYNDNFNRGRLSCGEARRTVRDNGFRNVATIECNGRTYTFEATRHGRDVTVFVDSRTGRISRG
Ga0308199_119290213300031094SoilMKKILLASAFAAAFAMGIPVAAEAKTNVKVFLGVPYYDYQYGPDYRFREGYGWYQPRGYFNRGRLSCGEARWRVRSSGFRNVSTVECNGRTYTFEATRRGRDVTVFVDSRTGRISRG
Ga0308193_109284113300031096SoilMKKILLASAFAAAFAMGIPVAAEAKTNVKVFLGVPYYDYQYGPDYRFREGYGWYQPRGYVNRGRLSCGEARWRVRSSGFRNVSTVECNGRTYTFEATRRGRDVIVYVNSRTGAIWRG
Ga0308187_1046640513300031114SoilMKKILLASAFAAALAMGLPLAAEAKTSVKVYLGVPYYDYQYGPDYRFREGYGWYHPMGIYTRGRLSCGEARWRVRNSGFRNVSTIECNGRTYTFEATRRGRDVTVFVDSRTGAIWRG
Ga0308187_1049927213300031114SoilMKKIILASAFAAAVAMGLPMAAQADTKVKVYLGMPHYGYQVGPDYRFREGYGWYRPVGIYRGRLSCGEARARVRHSGFRNVATIECNGRTYTFEATRRGRDVTVYVNSRTGAIWRG
Ga0308195_102616823300031123SoilAAAFAMGIPVAAEAKTNVKVFLGVPYYDYQYGPDYRFREGYGWYQPRGYFNRGRLSCGEARWRVRSSGFRNVSTVECNGRTYTFEATRRGRDVIVYVNSRTGAIWRG
Ga0308195_103363123300031123SoilMKKVILASAFAAALAMGLPMAAQADTKVKVYLGMPHYGYQVGPDYRFREGYGWYRPVGIYRGRLSCGEARARVRHSGFRNVATIECQGRTYIFEATRRGRDVIVYVNSRTGDIWRG
Ga0308195_106976513300031123SoilFAMKNLFLATAAAATMMLAMPLAADAAKVKIYLGVPHYSYQVGPDYRFREGYGWYQYSDYNDGFNRGRLSCGEARRIVRNNGFRNVATIECNGRMYTFEATRHGRDVTVFVNSRNGRISR
Ga0308195_108681613300031123SoilMKGLVLASAVAATLAFAMPTAADAKVKIYLGVPHYGYQVGPDYRFREGNGWYRYSGYNDDYDRGRLSCGEARRAVRNSGYRNVSTIECNGRTYTFEATRRGRDVTVFVNSRTGAVWRG
Ga0307505_1000802063300031455SoilMKGLFLATAVAATLAFAMPTTADAAKVKIYLGGIPHYGYQLGPDYIYRDGYGWYQDSRYYKNNRGRLSCGEARRVVRNSGFRNVATIECNGRTYTFEATRRGRDVTVFVDSRTGRISRG
Ga0307505_1005339223300031455SoilMKGFFIATAVAATLAFAMPTAADAKVKVYLGFPHYDYQVGPDYRYRDGYGWYQDRNYNRGYNRGRLSCGEARRAVRNSGYRNVSTIECNGSTYTFEATRRGRDVTVFVNSKNGRIWRG
Ga0307408_10154517013300031548RhizosphereAVLAMGVPVAADAATKVKVYLGMPHYGYQVGPDYRFREGYGWYRPIGIYRGRLSCGEARARVRHSGFRNVATIECNGRTYTFEATRRGRDVTVYVNSRTGAIWRG
Ga0307516_1043547833300031730EctomycorrhizaMKGLFLASAVATAMALALPTAADAKTQVKVFLGVPYYDYQYGPDYRFREGYGWYAPVGVYNRGRISCGEARRIVRGNGFRNVSTVECNGRTYTFEATRRGR
Ga0307405_1071986223300031731RhizosphereMKKIILASAFAAALAMGLPLAAEADTKVKIYLGMPHYGYQVGPDYRFRQGYGWYRPIGIYRGRLSCGEARARVRHSGFRNVATIECQGRTYTFEATRRGRDVTVYVNSRT
Ga0310907_1065431413300031847SoilMKSLYLASALAAALAMGLPLAAEAKTNVQIFFGMPHYSYQVGPDYRFRDGYGWYRPVGIYRGRLSCGEAKWRVRNSGFRNVSTIECQGRTYTFEATRRGRDVTVFVNSRTGAVWRG
Ga0307412_1065096613300031911RhizosphereMKKVILASAFAAAIAMGLPLAAVADTKVKVYLGMPHYGYQVGPDYRFREGYGWYRPIGIHRGRLSCGEARARVRHSGFRNVATIECNGRTYTFEATRRGRDVTVYVNSRTGAVWRG
Ga0307416_10081990713300032002RhizosphereMKKIILASAFAAAIAMGLPLAAEADTKVKVYLGMPHYGYQVGPDYRFRQGYGWYRPIGIYRGRLSCGEARARVRHSGFRNVATIECQGRTYTFEATRRGRDVTVYVNSRSGAIWRG
Ga0307415_10074710713300032126RhizosphereMKKLIFASAFAAAIAMGMPMAAQADTKVKVYLGLPHYGYQVGPDYRFREGYGWYRPVAVYNRGRVSCGEARRIVRNSGFRNVATIECQGRTYTFEATRRGRDVTVYVNSRTGAVWRG
Ga0335397_1003549993300032420FreshwaterMKGFFLASAVAVTLALGMSTAADAKVKIYLGVPHYDYQYGPDYRFREGYGWYQYSGYNDYNRGRLSCGEARRVVRNNGYRNVNTIECRGPTYTFEATRRGRDVTVFVNSRNGRMWRG
Ga0370499_0160044_3_3353300034194Untreated Peat SoilVGFVLFDKRSFTMKGFFLATGFAATLAFGMPVAAEAAKVKIYLGVPHYDYRVGPDYRFRDGYGWYRPVPVYKRGRLSCGEAKWRVRDKGFRNVSTIECRGATYTFKARRGD

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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