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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105530 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 63 residues |
| Representative Sequence | EGDNFTQTAAVYLTLVWCLREMRRYKEAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEEC |
| Number of Associated Samples | 92 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 89 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.51 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (31.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (43.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 64.84% β-sheet: 0.00% Coil/Unstructured: 35.16% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.51 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF13279 | 4HBT_2 | 62.00 |
| PF03061 | 4HBT | 10.00 |
| PF00278 | Orn_DAP_Arg_deC | 3.00 |
| PF00496 | SBP_bac_5 | 2.00 |
| PF01161 | PBP | 1.00 |
| PF07944 | Glyco_hydro_127 | 1.00 |
| PF13807 | GNVR | 1.00 |
| PF00801 | PKD | 1.00 |
| PF00884 | Sulfatase | 1.00 |
| PF00005 | ABC_tran | 1.00 |
| PF07977 | FabA | 1.00 |
| PF14237 | GYF_2 | 1.00 |
| PF01643 | Acyl-ACP_TE | 1.00 |
| PF01243 | Putative_PNPOx | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG0019 | Diaminopimelate decarboxylase | Amino acid transport and metabolism [E] | 3.00 |
| COG1166 | Arginine decarboxylase (spermidine biosynthesis) | Amino acid transport and metabolism [E] | 3.00 |
| COG0764 | 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase | Lipid transport and metabolism [I] | 1.00 |
| COG1881 | Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family | General function prediction only [R] | 1.00 |
| COG3533 | Beta-L-arabinofuranosidase, GH127 family | Carbohydrate transport and metabolism [G] | 1.00 |
| COG3884 | Acyl-ACP thioesterase | Lipid transport and metabolism [I] | 1.00 |
| COG4706 | Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain | Lipid transport and metabolism [I] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 12.00% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 11.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 9.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 6.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 5.00% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 4.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 4.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 3.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.00% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 2.00% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 2.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.00% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 2.00% |
| Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Watersheds | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds | 1.00% |
| Thermal Springs | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs | 1.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 1.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.00% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 1.00% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2067725001 | Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil | Environmental | Open in IMG/M |
| 3300004009 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 | Environmental | Open in IMG/M |
| 3300004052 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005174 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 | Environmental | Open in IMG/M |
| 3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
| 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
| 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
| 3300005574 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 | Environmental | Open in IMG/M |
| 3300005575 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 | Environmental | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
| 3300006048 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Host-Associated | Open in IMG/M |
| 3300006177 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
| 3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
| 3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
| 3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009444 | Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300011434 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2 | Environmental | Open in IMG/M |
| 3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012198 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
| 3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
| 3300012358 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG | Environmental | Open in IMG/M |
| 3300012360 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG | Environmental | Open in IMG/M |
| 3300012893 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1 | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012972 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014884 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da | Environmental | Open in IMG/M |
| 3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300018059 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex | Environmental | Open in IMG/M |
| 3300018066 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1 | Environmental | Open in IMG/M |
| 3300018078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300021861 | Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300025160 | Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2 | Environmental | Open in IMG/M |
| 3300025318 | Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1 | Environmental | Open in IMG/M |
| 3300025551 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025971 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026298 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026532 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes) | Environmental | Open in IMG/M |
| 3300027577 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes) | Environmental | Open in IMG/M |
| 3300027875 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028715 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203 | Environmental | Open in IMG/M |
| 3300028790 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122 | Environmental | Open in IMG/M |
| 3300028803 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120 | Environmental | Open in IMG/M |
| 3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
| 3300030619 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq) | Environmental | Open in IMG/M |
| 3300031366 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S | Environmental | Open in IMG/M |
| 3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
| 3300031997 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0 | Environmental | Open in IMG/M |
| 3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300032275 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom | Environmental | Open in IMG/M |
| 3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
| 3300033158 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1 | Environmental | Open in IMG/M |
| 3300033407 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175 | Environmental | Open in IMG/M |
| 3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
| 3300034268 | Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| GPWNP_02432780 | 2067725001 | Soil | VYLTLVWCLREMRLYREAIALAEEGLQRMPDAVLAQWATQVEDELVAAEREEC |
| Ga0055437_100646181 | 3300004009 | Natural And Restored Wetlands | LLGEGDNFRHAASVYLTLVWCLREMRHYQEALDLASEGLERCPDAILAQWASLVEEELAESQKEEC* |
| Ga0055490_100629312 | 3300004052 | Natural And Restored Wetlands | VYLTLVWCLREQRRYREALAVAEEGLRRCDDAVLAHWAAIVEEELAEAERERC* |
| Ga0062593_1013359082 | 3300004114 | Soil | EGDNYSQTAPVYLTLVWCLRELRRFKEALAVAEEGLAAIPDAVLAQYASLVEQELAEAEKERC* |
| Ga0062590_1004545793 | 3300004157 | Soil | AVYLTIVWCLRETRRYREAIAAAEEGLARMPDAVLAQWATQIEEELVAAEKEEC* |
| Ga0063356_1006299971 | 3300004463 | Arabidopsis Thaliana Rhizosphere | ERAEAARALLDEGDNAVHAAAVYLTLVWCLREKRLFREAIAMAEEGLARAPDAILAQWATQVQDELIAAEKERC* |
| Ga0063356_1058801082 | 3300004463 | Arabidopsis Thaliana Rhizosphere | SVHAAAVYLTLVWCLREKRRFREAIAVAEEGLQRAPDAILAQWATQTQDDLIAAEKERC* |
| Ga0062595_1013652772 | 3300004479 | Soil | QTAPVYLTLVWCLRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC* |
| Ga0062594_1011111681 | 3300005093 | Soil | YLTLVWCLRELRLFKEALAVAEEGLAVIPDAVLAQYASLVEQELADAEKERC* |
| Ga0062594_1020021882 | 3300005093 | Soil | VYLTLVWCLRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC* |
| Ga0066680_104813201 | 3300005174 | Soil | EALAHAREALALLGEGDNFRHAGSVYLTMVWCLRELRRYREALEVAEEGLRRTPDAVLAQWANQVEEDVARAERERC* |
| Ga0066676_104355603 | 3300005186 | Soil | GEGDNFRHAGSVYLTMIWCLRELRRYREALEVAEEGLRRTPDAVLAQWASQVEEDIVRAERERC* |
| Ga0070690_1010217412 | 3300005330 | Switchgrass Rhizosphere | WCLRELRRFKEALAVAEEGLAAIPDAVLAQYASLVEQELAEAEKEEC* |
| Ga0068869_1019863302 | 3300005334 | Miscanthus Rhizosphere | PEALQTAHGARALLGEGDNFTQTAAVYLTIVWCLRETRRYREAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKDEC* |
| Ga0070689_1018627991 | 3300005340 | Switchgrass Rhizosphere | YLTIVWCLRETRRYREAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEEC* |
| Ga0070669_1009337803 | 3300005353 | Switchgrass Rhizosphere | LRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC* |
| Ga0070671_1019909721 | 3300005355 | Switchgrass Rhizosphere | ARRLLGEDDNSLQTAPVYLTLVWCLRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC* |
| Ga0070698_1020736102 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | EGDNFRHAGSVYLTMEWCLRELRRYREALEVAEEGLRRTPDAVLAQWASQVEEDIVRAERERC* |
| Ga0066701_102445301 | 3300005552 | Soil | LADARQALALLEEGENFRHAGSVYLTIVWCLREMRRYREALAVAEEGLRRTPDAVLAQWATQVEEDLARAERERC* |
| Ga0066694_104981182 | 3300005574 | Soil | YLTMVWCLRELRRYREALEVAEEGLRRTPDAVLAQWASQVEEEVARAERERC* |
| Ga0066702_106137922 | 3300005575 | Soil | VYLTLVWCLREMRRYREAIAVAEEGLQRMPDAVLAQWATEIEDELVAAEKKRC* |
| Ga0070702_1013543891 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | VWCLRELRLFKEALAVAEEGLAVIPDAVLAQYASLVEQELADAEKERC* |
| Ga0068866_107464902 | 3300005718 | Miscanthus Rhizosphere | EGDNFTQTAAVYLTLVWCLREMRRYKEAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEEC* |
| Ga0068863_1016234381 | 3300005841 | Switchgrass Rhizosphere | CLRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC* |
| Ga0066652_1003190891 | 3300006046 | Soil | RALAAAEEARRLLGEADNFRHAAPVYLTLVWCLRELRLFKEALAVAEEGLAVIPDAVLAQYASLVEQELAEAEKERC* |
| Ga0066652_1008407141 | 3300006046 | Soil | AHARDARALLGEGDNFRHAGSVYLTMVWCLRELRRYREALEVAEEGLRRTPDAVLAQWASQVEEEVARAERERC* |
| Ga0075363_1008044852 | 3300006048 | Populus Endosphere | LKIAHEARTLLGEGDNFTQTAAVYLTLVWCLREMRRYKEAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEEC* |
| Ga0075362_102780883 | 3300006177 | Populus Endosphere | AVYLTLVWCLREMRRYKEAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEEC* |
| Ga0075428_1022805602 | 3300006844 | Populus Rhizosphere | YLTLVWCLREKRQLREALSAAEEGLARVGDAVLAHWAGTVEEELAAAEQEEC* |
| Ga0075420_1009004791 | 3300006853 | Populus Rhizosphere | TSSVYLTLVWCLRELRQLREAVAVAEEGLLRCPDVVLAQWAGVVEEELAESERERC* |
| Ga0075434_1013016083 | 3300006871 | Populus Rhizosphere | TLVWCLREMRRYREAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEEC* |
| Ga0075429_1014961212 | 3300006880 | Populus Rhizosphere | SDDEALAVAERARSLLGEGDNDRETGPVYLTLVFCLREKRLYRQALAAAEEGLERCADAVLAHWAEVVEDELAEAEKERC* |
| Ga0079215_102894323 | 3300006894 | Agricultural Soil | EEALGVAERARAILDEGDNAGQAAAVYLTMVWCLREMRRFREAIAAAEEGLARAPDAILAQWATQVEDDLAESRKERC* |
| Ga0079218_128015632 | 3300007004 | Agricultural Soil | ELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAEAEKEEC* |
| Ga0099793_104701242 | 3300007258 | Vadose Zone Soil | ALKVAHEALAVLGEGDNFAQTAAVYLTLVWCLREMRRYREAIAVAEEGLERMPDAVLAQWATQIEDELVASEKEEC* |
| Ga0114129_102450224 | 3300009147 | Populus Rhizosphere | YLTLVWCLRELRHFKEALAVAEEGLERCPDAILAQWASVVEEELAEAEKEEC* |
| Ga0114945_106746272 | 3300009444 | Thermal Springs | ARSLLDVGENFRQAAPVYLTLVWCLREQRLFKEALALAEEGLGRCADAVLAQWASVVEEELEEAEQERC* |
| Ga0126372_116713512 | 3300010360 | Tropical Forest Soil | VYLTIVWCLRELGRYREALETAEEGLRRTPDAVLAQWASQVEDDLAQAERERC* |
| Ga0105239_121400531 | 3300010375 | Corn Rhizosphere | EALKIAHEARTLLGEGDNFTQTAAVYLTLVWCLREMRRYKEAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEEC* |
| Ga0134122_128858841 | 3300010400 | Terrestrial Soil | RDLLPEGDNFQQTSAVYLTLVWCLRELRRYPEAVAMAEEGLLRCPDAVLAQWATVVEEELAENERNEC* |
| Ga0134123_102723941 | 3300010403 | Terrestrial Soil | ALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC* |
| Ga0134123_124300921 | 3300010403 | Terrestrial Soil | LREADNFRHAAPVYLTLVWCLRELRLFKEALAVAEEGLAVIPDAVLAQYASLVEQELADAEKERC* |
| Ga0134123_132975882 | 3300010403 | Terrestrial Soil | LHALGRDQEAMKTAREARAVLGEGDNFTQTAAVYLTLVWCLREMRRYREAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEDC* |
| Ga0137464_11978292 | 3300011434 | Soil | RAEAARALLDEGDNAVQAAAVYLTLVWCLREKRRFREAIAMAEEGLARGPDAILAQWATQVQDELIAAEKERC* |
| Ga0137389_107518691 | 3300012096 | Vadose Zone Soil | AAPVYLTLVWCLREGRRFKEALAMAEEGLARVPDAVLAEWAAVVEQELAEAEKERC* |
| Ga0137388_118790671 | 3300012189 | Vadose Zone Soil | PEALKVAHEALAVLGEGDNFAQAAAVYLTLVWCLREMRRYREAIAVAEEGLARMPDAVLAQWATQIEEELVEAEKERC* |
| Ga0137364_113297701 | 3300012198 | Vadose Zone Soil | VQTAAVYLTLVWCLREMRRYREAIAVAEEGLARTPDAVLAQWTTQIEEGLVAAEKEEC* |
| Ga0137379_107879952 | 3300012209 | Vadose Zone Soil | ALLDEGDNDLQAGPVYLTLVWCLREMRLYREALAMAEEGLRRVPDAILANWAATVEDELAAAQKEEC* |
| Ga0137372_105126411 | 3300012350 | Vadose Zone Soil | AVLGEADNFTQTAAVYLTIVWCLREMRLYREAIAMAEEGLARMPDAVLAQWATEIEDDLVAAEKERC* |
| Ga0137368_109751002 | 3300012358 | Vadose Zone Soil | AVLGEGDNFAQTAAVYLTLVWCLREMRRYREAIAVAEEGLERMPDAVLAQWATQIEEELVEAEKERC* |
| Ga0137375_103121144 | 3300012360 | Vadose Zone Soil | DQEALKVAHEALAVLGEGDNFAQTAAVYLTLVWCLREMRRYREAIAVAEEGLERMPDAVLAQWATQIEEELVEAEKERC* |
| Ga0157284_101215063 | 3300012893 | Soil | VWCLRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC* |
| Ga0164300_111292022 | 3300012951 | Soil | VYLTLVWCLRELRQFREALAVAEEGLAVIPDAVLAEYASLVEQELGTRAPG* |
| Ga0134077_104672862 | 3300012972 | Grasslands Soil | RDEEALAHARDARALLGEGDNFRHVGSVYLTMVWCLRELRRYREALEVAEEGLRRTPDAVLAQWASQVEEEVARAERERC* |
| Ga0157378_102224113 | 3300013297 | Miscanthus Rhizosphere | MTLKIAHEARALLGEGDNFTQTAAVYLTLAWCLREMRRYKEAIAVAEEGLTRMPDAVLAQWATQIEEELIAAEKEEC* |
| Ga0180104_10899241 | 3300014884 | Soil | DDDAALEEAEEARRLLDEGDNRRHAAAVYLILVWCLREKRLLREALAAAEEGLTRVNDAVLAHWAGTVEEELAAAEQEEC* |
| Ga0173480_102031331 | 3300015200 | Soil | AVHAAAVYLTLVWCLREKRRYREAVAAAEEGLSRAPDAVLAQWASQVQDELRRAEKERC* |
| Ga0132258_125573763 | 3300015371 | Arabidopsis Rhizosphere | LGENDNFRQTAPVYLTLVWCLRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC* |
| Ga0132256_1024133861 | 3300015372 | Arabidopsis Rhizosphere | LRLFKEALAVAEEGLAAIPDAVLAQYATLVEQELAAAEKERC* |
| Ga0132255_1044702102 | 3300015374 | Arabidopsis Rhizosphere | LRELRLFKEALAVAEEGLAVIPDAVLAQYASLVEQELADAEKERC* |
| Ga0184615_100290304 | 3300018059 | Groundwater Sediment | VYLTLVWCLRELRLFKEALAVAEEGLGRTSDAVLAEWASQVEQELAQAEDERC |
| Ga0184617_11196181 | 3300018066 | Groundwater Sediment | ALNVLARRLHALGRDEEAMKIADEARALLGEGDNFTQTAAVYLTLVWCLREMRRYREAIAVAEEGLARMPDAVLAHWATEIEEELMAAEKERC |
| Ga0184612_102585101 | 3300018078 | Groundwater Sediment | LGDPQHARHAGMVYLTLLWCYRELRRYKEALAAAEEGLARTPDAVLAEWATVVEQELAHAERERC |
| Ga0190274_110414301 | 3300018476 | Soil | AVHTAPVYLTLVWCLREKRRYREAVAAAEEGLSRAPDAVLAQWASQVQDELRAAEKERC |
| Ga0190274_117698642 | 3300018476 | Soil | GRDEEALAAAQEARGLLDEGDNAPHASAVYLTLVWCLRELRRFRDAIAAAEEGLERAPDAVLAQWATQVQDELIAAEKERC |
| Ga0190274_138035801 | 3300018476 | Soil | FVQTAAVYLTLVWCLRELRRFREAITAAEEGLRRMPDAVLAQWASQIEEEMVAAERERC |
| Ga0213853_103445512 | 3300021861 | Watersheds | QTARELLEEGDNFRYAAPVYLTLVWCLRERRQFKEALALAEEGLARAPDSVLGEWAEVVEQELAEAEKERC |
| Ga0209109_100820543 | 3300025160 | Soil | DDDAALAEAQEARRLLDEGDNRRHAAAVYLTLVWCLREKRLLREALAAAEEGLTDVNDAVLAHWAGTVEEELAAAEQEEC |
| Ga0209519_102178673 | 3300025318 | Soil | RRLLDEGDNRRHAAAVYLTLVWCLREKRLLREALAAAEEGLTDVNDAVLAHWAGTVEEELAAAEQEEC |
| Ga0210131_10134821 | 3300025551 | Natural And Restored Wetlands | APVYLTIVWCLREQRRFRDALAAADEGLARCPDAILAQWASVVEEELAEAEKEEC |
| Ga0207643_108850593 | 3300025908 | Miscanthus Rhizosphere | MAPVYLTLVWCLRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAE |
| Ga0207706_104862413 | 3300025933 | Corn Rhizosphere | LFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC |
| Ga0207691_103975332 | 3300025940 | Miscanthus Rhizosphere | LSAAETARRLLGEDDNYRQTAPVYLTLVWCLRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKERC |
| Ga0210102_11092012 | 3300025971 | Natural And Restored Wetlands | VYLTLVWCLREQRRYREALAVAEEGLRRCDDAVLAHWAAIVEEELAEAERERC |
| Ga0207641_101859623 | 3300026088 | Switchgrass Rhizosphere | NFTQTAAVYLTLAWCLREMRRYKEAIAVAEEGLTRMPDAVLAQWATQIEEELIAAEKEEC |
| Ga0209236_12735592 | 3300026298 | Grasslands Soil | DEEALAHAREALAVLGEGDNFRHAGSVYITMVWCLRELRRYREALEVAEEGLRRTPDAILAQWASQVEEEVARAERERC |
| Ga0209160_11376041 | 3300026532 | Soil | ALNSLARCLHALGHDQEALKVAHEARVVLGEPGNFAQTAAVYLTLVWCLREMRRYREAIAVAEEGLLRMPDAVLAQWATQIEDELAASEKEEC |
| Ga0209874_11561431 | 3300027577 | Groundwater Sand | ARGLLGEGENARHAASVYLTLVWCLRELRRYKEALAAAAEGLARMPDAVLAEYATLVEQEWAHAERERC |
| Ga0209283_104274822 | 3300027875 | Vadose Zone Soil | ALLGEGDNFRHAGSVYLTMVWCLRELRRYREALEVAEEGLRRTPDAVLAQWASQVEEEVARAERERC |
| Ga0209590_104122602 | 3300027882 | Vadose Zone Soil | LAHAREALALLGEGENFRHAGSVYLTMVWCLRELRRYREALEVAEEGLRRTPDAVLAQWANQVEEDVARAERERC |
| Ga0209488_104980291 | 3300027903 | Vadose Zone Soil | AVLGEGDNFAQTAAVYLTLVWCLREMRRLREAIAVAEEGLARMPDAVLAQWATQIEEELVEAEKERC |
| Ga0207428_112558381 | 3300027907 | Populus Rhizosphere | DNYRQTAPVYLTLVWCLRELRLFKEALAVAEEGLAAIPDAVLAQYASLVEQELAESEKER |
| Ga0268265_101375003 | 3300028380 | Switchgrass Rhizosphere | ARTLLGEGDNFTQTAAVYLTLVWCLREMRRYKEAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEEC |
| Ga0307313_101021031 | 3300028715 | Soil | EARALLEEGENFRHAGSVYLTMVWCLRELRRYREALEVAEEGLRRTPDAVLAQWASQVEEDVARAERERC |
| Ga0307283_102088852 | 3300028790 | Soil | AVYLTLVWCLREKRRYREAVAAAEEGLSRAPDAVLAQWASQVQDELRRAEKERC |
| Ga0307281_102913861 | 3300028803 | Soil | EGDNFRHAASVYLTLVWCLREMRQYREALELATEGLERCPDAILAQWASLVEEELAESQKEEC |
| Ga0307296_105964481 | 3300028819 | Soil | RRLLGEADNFRHAAPVYLTLVWCLRELRRFKEALAVAEEGLAVIPDAVLAQYASLVEQELAEAEKERC |
| Ga0268386_100103401 | 3300030619 | Soil | RARALLDSGDNFVQAGPVYLTLVWCLRDLRRYREALELAEEGLARVPDAILANWAATVEEELAEAEKDEC |
| Ga0307506_100901732 | 3300031366 | Soil | AAVYLTLVWCLREMRHYREAIAVAEEGLARMPDAVLAQWATQIEDELVAAEREEC |
| Ga0310904_111382481 | 3300031854 | Soil | QTAAVYLTLVWCLRELRRFREAIAMAEEGLRRMPDAVLAQWATQIEEELIAAEKEEC |
| Ga0315278_110093902 | 3300031997 | Sediment | RGLLSEGDNFRQTAPVYLTLLWCLREKRRYREALAVAEEGLARTPDAVLAQWAGVVEEELAEAEKEGC |
| Ga0310906_114091731 | 3300032013 | Soil | LLWCLREKRRYLEALAAAEEGLSRCSDAVLAQWASVVEDELAVAQKEEC |
| Ga0307472_1024902371 | 3300032205 | Hardwood Forest Soil | NEGDNFRYAGSVYLTMVWCLREMRRYREALEVAEEGLRRTPDAVLAQWASTVEDDVARAERERC |
| Ga0315270_110674661 | 3300032275 | Sediment | IVWCLREKRRFREALAAADEGLTRCPDAILAQWASLVEDELAEAEKEEC |
| Ga0335084_116481821 | 3300033004 | Soil | RLLDDGENFRFAAPVYLTIVWCLREMRRFREALAAADEGLARCPDAILAQWASLVEEELAEAEKEEC |
| Ga0335084_123684672 | 3300033004 | Soil | EALEVAESARGMLGEGDNFRHAAPVYLTIVWCLREQRRFREALAAADEGLSRCPDAILAQWASLVEEELAEAEREEC |
| Ga0335077_104318741 | 3300033158 | Soil | GENFRETAPVYLTLVWCLRELRRYREALRLAEEGLARTPDAVLAQWASTVEEELAAAEKEDC |
| Ga0214472_115800453 | 3300033407 | Soil | VYLTLVWCLREKRQYREAIALAEEGLDRMPDGVLAEWARQLEDDLVEAEKDEC |
| Ga0247829_116934811 | 3300033550 | Soil | NFTQTAAVYLTLVWCLREMRRYKEAIAVAEEGLARMPDAVLAQWATQIEEELIAAEKEEC |
| Ga0372943_0960527_379_567 | 3300034268 | Soil | DDNFHQTSAVYLTLVWCLRELKRFREAVAMAEEGLLRCPDAVLAQWATVVEEELAEAERDRC |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |