NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F105518

Metagenome Family F105518

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105518
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 61 residues
Representative Sequence VADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI
Number of Associated Samples 89
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.00 %
% of genes near scaffold ends (potentially truncated) 23.00 %
% of genes from short scaffolds (< 2000 bps) 80.00 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(28.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(61.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 48.89%    β-sheet: 0.00%    Coil/Unstructured: 51.11%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02397Bac_transf 68.00
PF03706LPG_synthase_TM 3.00
PF13480Acetyltransf_6 1.00
PF09107SelB-wing_3 1.00
PF12680SnoaL_2 1.00
PF13439Glyco_transf_4 1.00
PF13185GAF_2 1.00
PF02786CPSase_L_D2 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2148Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)Cell wall/membrane/envelope biogenesis [M] 68.00
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 3.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459020|G1P06HT01AYYJJAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium630Open in IMG/M
2228664021|ICCgaii200_c1079293All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300000156|NODE_c0743153All Organisms → cellular organisms → Bacteria16833Open in IMG/M
3300000550|F24TB_11698220All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300000881|JGI10215J12807_1202454All Organisms → cellular organisms → Bacteria1583Open in IMG/M
3300000891|JGI10214J12806_11420377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium668Open in IMG/M
3300000956|JGI10216J12902_103084834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium775Open in IMG/M
3300003911|JGI25405J52794_10050530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium890Open in IMG/M
3300004114|Ga0062593_103102484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium532Open in IMG/M
3300004157|Ga0062590_100197549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1449Open in IMG/M
3300004479|Ga0062595_100990011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium721Open in IMG/M
3300004479|Ga0062595_102401122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300004480|Ga0062592_100567503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium956Open in IMG/M
3300004480|Ga0062592_102444163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium525Open in IMG/M
3300004643|Ga0062591_101165139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium748Open in IMG/M
3300005294|Ga0065705_10024605All Organisms → cellular organisms → Bacteria1808Open in IMG/M
3300005332|Ga0066388_100672649All Organisms → cellular organisms → Bacteria1646Open in IMG/M
3300005332|Ga0066388_100990069All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300005526|Ga0073909_10031729All Organisms → cellular organisms → Bacteria1813Open in IMG/M
3300005713|Ga0066905_100165447All Organisms → cellular organisms → Bacteria1612Open in IMG/M
3300005764|Ga0066903_101875420All Organisms → cellular organisms → Bacteria1147Open in IMG/M
3300005937|Ga0081455_10003730All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria17412Open in IMG/M
3300005983|Ga0081540_1007860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales7538Open in IMG/M
3300005983|Ga0081540_1014013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5170Open in IMG/M
3300006178|Ga0075367_10838580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium586Open in IMG/M
3300006755|Ga0079222_10188364All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300006844|Ga0075428_101351433All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300009098|Ga0105245_10029553All Organisms → cellular organisms → Bacteria4844Open in IMG/M
3300009147|Ga0114129_10531409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1532Open in IMG/M
3300009148|Ga0105243_11065316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium815Open in IMG/M
3300009176|Ga0105242_11283834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium755Open in IMG/M
3300009792|Ga0126374_11146882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium619Open in IMG/M
3300009840|Ga0126313_10017015All Organisms → cellular organisms → Bacteria4760Open in IMG/M
3300009840|Ga0126313_10145889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1783Open in IMG/M
3300010038|Ga0126315_10034393All Organisms → cellular organisms → Bacteria2660Open in IMG/M
3300010040|Ga0126308_10132552All Organisms → cellular organisms → Bacteria1559Open in IMG/M
3300010041|Ga0126312_10068414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2392Open in IMG/M
3300010042|Ga0126314_10126298All Organisms → cellular organisms → Bacteria1764Open in IMG/M
3300010044|Ga0126310_10210555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1286Open in IMG/M
3300010046|Ga0126384_11044752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium746Open in IMG/M
3300010362|Ga0126377_10207690All Organisms → cellular organisms → Bacteria1881Open in IMG/M
3300010362|Ga0126377_10518672All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300010373|Ga0134128_10049027All Organisms → cellular organisms → Bacteria4895Open in IMG/M
3300012488|Ga0157343_1024168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium572Open in IMG/M
3300012491|Ga0157329_1035635All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300012497|Ga0157319_1021607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium630Open in IMG/M
3300012891|Ga0157305_10167332All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium605Open in IMG/M
3300012893|Ga0157284_10290641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300012901|Ga0157288_10224316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium614Open in IMG/M
3300012902|Ga0157291_10345881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium532Open in IMG/M
3300012907|Ga0157283_10007853All Organisms → cellular organisms → Bacteria1698Open in IMG/M
3300012908|Ga0157286_10051613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1057Open in IMG/M
3300012911|Ga0157301_10096540All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300012913|Ga0157298_10083073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium827Open in IMG/M
3300012941|Ga0162652_100028930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium821Open in IMG/M
3300012948|Ga0126375_10343128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1056Open in IMG/M
3300012948|Ga0126375_10562803All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300012957|Ga0164303_10315044All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300013096|Ga0157307_1026320All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300014745|Ga0157377_11534896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300015200|Ga0173480_10199769All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300015371|Ga0132258_10007103All Organisms → cellular organisms → Bacteria22473Open in IMG/M
3300015371|Ga0132258_10202406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4817Open in IMG/M
3300015372|Ga0132256_103658602All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300015373|Ga0132257_100104354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3267Open in IMG/M
3300015374|Ga0132255_100088810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4164Open in IMG/M
3300015374|Ga0132255_100335487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2185Open in IMG/M
3300018073|Ga0184624_10393780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium616Open in IMG/M
3300019356|Ga0173481_10005017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3512Open in IMG/M
3300019361|Ga0173482_10028033All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300019362|Ga0173479_10058305All Organisms → cellular organisms → Bacteria1295Open in IMG/M
3300020016|Ga0193696_1012964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2266Open in IMG/M
3300021445|Ga0182009_10138603All Organisms → cellular organisms → Bacteria1146Open in IMG/M
3300021510|Ga0222621_1015742All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300022756|Ga0222622_10006339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium5375Open in IMG/M
3300022915|Ga0247790_10015395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1598Open in IMG/M
3300023057|Ga0247797_1025938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium776Open in IMG/M
3300023071|Ga0247752_1066262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium585Open in IMG/M
3300024055|Ga0247794_10069659All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300025935|Ga0207709_10174761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1511Open in IMG/M
3300025949|Ga0207667_11787765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium579Open in IMG/M
3300027821|Ga0209811_10162779All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300027907|Ga0207428_10035680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4062Open in IMG/M
3300028708|Ga0307295_10022467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1549Open in IMG/M
3300028717|Ga0307298_10102069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria815Open in IMG/M
3300028718|Ga0307307_10309348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300028768|Ga0307280_10377649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300028787|Ga0307323_10042659All Organisms → cellular organisms → Bacteria1592Open in IMG/M
3300028811|Ga0307292_10016024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2597Open in IMG/M
3300028811|Ga0307292_10146310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales953Open in IMG/M
3300028819|Ga0307296_10243511All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300028875|Ga0307289_10081383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1313Open in IMG/M
3300030336|Ga0247826_10593569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales849Open in IMG/M
3300031226|Ga0307497_10613411All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300031548|Ga0307408_101615100All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300031938|Ga0308175_100381733All Organisms → cellular organisms → Bacteria1466Open in IMG/M
3300031938|Ga0308175_102882540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M
3300032012|Ga0310902_10957232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium592Open in IMG/M
3300032126|Ga0307415_100099685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2127Open in IMG/M
3300033550|Ga0247829_10155307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1786Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil25.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil7.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil7.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.00%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere3.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.00%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.00%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter1.00%
Sugar Cane Bagasse Incubating BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459020Litter degradation NP2EngineeredOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000156Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobicEngineeredOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300012488Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610Host-AssociatedOpen in IMG/M
3300012491Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610Host-AssociatedOpen in IMG/M
3300012497Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510Host-AssociatedOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4EnvironmentalOpen in IMG/M
3300023057Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6EnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
2NP_012765302170459020Switchgrass, Maize And Mischanthus LitterVADGNGTENVEQRPPEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI
ICCgaii200_107929322228664021SoilVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI
NODE_074315373300000156Sugar Cane Bagasse Incubating BioreactorVADGKGNLERPRGEAPRRLWFRVEEVELKWLRISETAFLLWVLAGLVLAWLIVALVLLLL
F24TB_1169822023300000550SoilVAEGNGSDLDQRPAEAPRRIWFHIEDVELKWLRISEAAFLMWVLAGLVLAWLVVALLFLFL*
JGI10215J12807_120245423300000881SoilVAEGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVVAWLVVALVFLLI*
JGI10214J12806_1142037723300000891SoilVADGNGSENVEQRPAEAPRRVWFHVEDIELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI*
JGI10216J12902_10308483423300000956SoilVADGDGTEKLEPRSNEAPRRVWFHVEDVELKWLRISETAFLLWVLAALVFAWLIVALVFLLL*
JGI25405J52794_1005053013300003911Tabebuia Heterophylla RhizosphereVADGNGSENVDQRPAEAPRRVWFHVEEVELKWLRISETAFLLWVLAGLVLAWLVVALVFLLX*
Ga0062593_10310248413300004114SoilSHDPGASASAPYNHRMAEGDRTENVEPRAGDAPRRVWFHLEEVELKWLRISEAAFLLWVLAALVLAWVIVALVFLL*
Ga0062590_10019754913300004157SoilVAEGNGTEKVERRTNEAPRRVWFHVEDVQLKWLRISETAFLLWVLAALVFAWLIVALVLLLV*
Ga0062595_10099001113300004479SoilVADGNGSKNFEQRSNEAPRRVWFHVEEFQLKWLRISETAFLLWVLAALVFAWLIVALVFLLL*
Ga0062595_10240112223300004479SoilNVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVVAWLVVALVFLLI*
Ga0062592_10056750313300004480SoilMAEGDPTENVEPRAGEAPRRVWFHLEEVELKWLRISEAAFLLWVLAVLVLAWLIVALVFLL*
Ga0062592_10244416313300004480SoilENVEQRPAEAPRRVWFHVEDIELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI*
Ga0062591_10116513923300004643SoilMAEGDPTENVEPRAGEAPRRVWFHLEEVELKWLRISEAAFLLWVLAALVLAWVIVALVFLL*
Ga0065705_1002460523300005294Switchgrass RhizosphereMAEGDRTENVEPRAGDAPRRVWFHLEEVELRWLRISETAFLLWVLAALVLAWLIVALVFLL*
Ga0066388_10067264923300005332Tropical Forest SoilVADGNGSENVEQRAAETPRRVWFHVEDVELKWLRISETAFLLWVLAGLVLAWLVVALVFLLF*
Ga0066388_10099006923300005332Tropical Forest SoilVADGNGTENVETRARDAPRRVWFHVEEVELKWLRISETAFLLWVLAGLVLAWVIVALLFLFL*
Ga0073909_1003172923300005526Surface SoilVAEGNRNENVESPAAKPPRRIWFHLEEVQLSWLRISETAFLLWVLAGLVLVWLIAAVLLLLL*
Ga0066905_10016544723300005713Tropical Forest SoilVADGNGSENVEQRRAEAPRRIWFHVEEVQLKRLRVSETAFLLWVLAGLVLAWLVVALVFLLV*
Ga0066903_10187542023300005764Tropical Forest SoilVADGNGSENVEQRPAETPRRVWFHVEDVELKWLRISETAFLLWVLAALVLAWLVVALVFLLL*
Ga0081455_1000373073300005937Tabebuia Heterophylla RhizosphereVADGNGSENVDQRPAEAPRRVWFHVEEVELKWLRISETAFLLWVLAGLVLAWLVVALVFLLL*
Ga0081540_100786073300005983Tabebuia Heterophylla RhizosphereVADGNGSEKVEQRPAEEPRRVWFHLEEVELKWLRISETAFLLWVLAALVLAWLVVALVFLLI*
Ga0081540_101401333300005983Tabebuia Heterophylla RhizosphereMAEGNRNENVEPRPAKPRRMWFHLEEVELSWLRIGEVAFLLWVLAALVLAWLIVAAVLLLL*
Ga0075367_1083858013300006178Populus EndosphereVADGNGSENVEQPPAEAPRRVWFHIEDVELKRLRIGETAFLLWVLAGLVLAWLVVALVFLLV*
Ga0079222_1018836423300006755Agricultural SoilVADGNEKLERPRSEAPRRIWYRVDEIQLRRLRISESAFLLWVLAGLVFAWLVVALLLVFL
Ga0075428_10135143323300006844Populus RhizosphereVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLV*
Ga0105245_1002955313300009098Miscanthus RhizosphereVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVL
Ga0114129_1053140913300009147Populus RhizosphereDGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLV
Ga0105243_1106531623300009148Miscanthus RhizosphereMAEGDRTENVEPRTGNTPRRIWFHLEEVELRWLRISETAFLLWVLAGLVLAWLIVALVFLL*
Ga0105242_1128383413300009176Miscanthus RhizosphereMAEGDRTENVEPRAGDAPRRIWFHLEEVELRWLRISETAFLLWVLAGLVLAWLIVALVFL
Ga0126374_1114688213300009792Tropical Forest SoilVADGNGSENVEQRPAEAPRRVWFRIEDVELKWLRISETAFLLWVLAGLVLAWLVVALVLFLL*
Ga0126313_1001701523300009840Serpentine SoilVADGDGSENLEQRPTEAPRRIWFHVEEVELKWLRISEAAFLLWVLSGLVCAWLVVALVFLLL*
Ga0126313_1014588913300009840Serpentine SoilVADGNGSEKLEQRPAEAPRRIWFHVEDVELKWLRISEAAFLLWVLAGLVLAWLVVALVFL
Ga0126315_1003439323300010038Serpentine SoilVADGNGSEKLEQRPAEAPRRIWFHVEDVELKWLRISEAAFLLWVLAGLVLAWLVVALVFLLL*
Ga0126308_1013255223300010040Serpentine SoilMADGNGSENLEQRPAEAPRRIWFHVEEVELKWLRISEAAFLLWVLAGLVLAWLVVALVFLLL*
Ga0126312_1006841433300010041Serpentine SoilVADGNGSENLEQRPAEAPRRIWFHVEEVELKWLRISEAAFLLWVLAGLVLAWLVVALVFLLR*
Ga0126314_1012629823300010042Serpentine SoilVADGNGSENLEQRPAEAPRRIWFHVEEVELKWLRISEAAFLLWVLAGLVLAWLVVALVFLLL*
Ga0126310_1021055523300010044Serpentine SoilVADGNGSENVEQRPAEAPRRIWFHVEEVELKWLRISEAAFLLWVLAGLVLAWLVVALVFLLLL*
Ga0126384_1104475223300010046Tropical Forest SoilVADGNGSENVEQRPAEAPRRVWFHIEDVELKWLRISETAFLLWVLAGLVLAWLVVALVFLLL*
Ga0126377_1020769023300010362Tropical Forest SoilVADGNGSENVEQRPAEAPRRVWFHFEEVELKWLRISETAFLLWVLAGLVLAWLVVALVLFLL*
Ga0126377_1051867223300010362Tropical Forest SoilVADGNGTEKVEQRPAEPPRRVWFHVEEVELKWLRISETAFLLWVLAGLVLAWLVVALVFLFA*
Ga0134128_1004902733300010373Terrestrial SoilVPLQFLVVARRADERAGRRIWFHVEDVELKWLPVSETAFLLWVLAGLVLVWLVVALVFVLL*
Ga0157343_102416813300012488Arabidopsis RhizosphereVADGNGTENLEPRATDASRRLWFHVEEVELKWLRISETAFLLWVLAGLVLAAG
Ga0157329_103563523300012491Arabidopsis RhizosphereVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVVLLV*
Ga0157319_102160723300012497Arabidopsis RhizosphereVADGNRTENLEQRATDAPRRLWFHVEEIELKWLPMGETAFLLWVLAGLVLAWVIVALLFLLL*
Ga0157305_1016733213300012891SoilVAEGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVVVWLVVALVLLLL*
Ga0157284_1029064123300012893SoilVAEGNRTENVERRTNEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVVAWLVVALVFLLI*
Ga0157288_1022431623300012901SoilVAEGDPNENVESPAAEPPRRVWFHLEEVELDWLRISETAFLPWVLAALVLAWLIVAVLLLLV*
Ga0157291_1034588123300012902SoilAEGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVVAWLVVALVFLLI*
Ga0157283_1000785323300012907SoilVADGNGSENVEQRPAEAPRRVWFHVEDIELKWLRIGETAFLLWVLAGLVVAWLVVALVFLLI*
Ga0157286_1005161313300012908SoilQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI*
Ga0157301_1009654023300012911SoilVAEGNGTEKVERRTNEAPRRVWFHVEDVQLKWLRISETAFILLVLAALVFAWLIVALVFLLL*
Ga0157298_1008307323300012913SoilVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI*
Ga0162652_10002893013300012941SoilVADGDGTEKLEPRPSETPRRMWFHVEDVQLRWLRISETAFLLWVLAGLVLAWLVVALVFLLL*
Ga0126375_1034312813300012948Tropical Forest SoilVADGNGSENVEQRPAEAPRRVWFHLEEVELKWLRISETAFLLWVLAGLVLAW
Ga0126375_1056280323300012948Tropical Forest SoilVADGNGTENVETRASDAPRRVWFHVEEVELKWLRISETAFLLWVLAGLVLAWVIVALLFLFL*
Ga0164303_1031504423300012957SoilVGEGNRNENVESPAAKPPRRIWFHLEEVQLSWLRISETAFLLWVLAGLVLVWLIAAVLLLLL*
Ga0157307_102632023300013096SoilPVAEGNGTEKVERRTNEAPRRVWFHVEDVQLKWLRISETAFLLWVLAALVFAWLIVALVLLLV*
Ga0157377_1153489623300014745Miscanthus RhizospherePVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLV*
Ga0173480_1019976923300015200SoilVAEGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI*
Ga0132258_1000710333300015371Arabidopsis RhizosphereVADSNGSEKLEQGPNEAPRRLWFHLEEVELRWLHISETAFLLWVLAALVLAWLIVALVFLLL*
Ga0132258_1020240633300015371Arabidopsis RhizosphereVADGNGSENVEQPPAEAPRRVWFHIEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVLLLV*
Ga0132256_10365860223300015372Arabidopsis RhizosphereVTDGNGTENVEPRAPDAPRRLWFHVEEVELKWLRISATAFLLWVLAGLVLAWVIVALLFLFL*
Ga0132257_10010435433300015373Arabidopsis RhizosphereVADGNGTENLEQRATDAPRRLWFHVEEIELKWLPMGETAFLLWVLAGLVLAWVIVALLFLLL*
Ga0132255_10008881023300015374Arabidopsis RhizosphereVTDGNGTENVEPRAPDAPRRLWFHVEEVELKWLRISETAFLLWVLAGLVLAWVIVALLFLFL*
Ga0132255_10033548713300015374Arabidopsis RhizosphereVADSNGSEKLEQGPNEAPRRLWFHLEEVELRWLHISETAFLLWVLAALVLAWLIVALVFL
Ga0184624_1039378023300018073Groundwater SedimentVADGNGSENVEQRPAEAPRRIWFRVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI
Ga0173481_1000501743300019356SoilVAEGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI
Ga0173482_1002803323300019361SoilVAEGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVVAWLVVALVFLLI
Ga0173479_1005830523300019362SoilVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVVAWLVVALVFLLI
Ga0193696_101296433300020016SoilMADGDRTENVEPRPADAPRRLWFHLEEVELKWLRMSEAAFLLWVLAALVLAWLIVALVFL
Ga0182009_1013860323300021445SoilVSEGDPNENVETPVAEQPRRVWFHLQEVELDWLRISEAAFLLWVLAGLVLAWLIVAVLLLLL
Ga0222621_101574223300021510Groundwater SedimentMADGDRTENVEPRPADAPRRLWFHLEEVELKWLRMSEAAFLLWVLAALVLAWLVVALVFL
Ga0222622_1000633943300022756Groundwater SedimentMAEGDRTENVEPRGGDAPRRFWFHLEEVELRWLRISETAFLLWVLAALVLAWLIVALVFL
Ga0247790_1001539523300022915SoilVAEGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVVAWLVVA
Ga0247797_102593823300023057SoilVAEGNGSENVEQRPAEAPRRVWFHVEDIELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLI
Ga0247752_106626213300023071SoilARRGPTISPVAEGNGTEKVERRTNEAPRRVWFHVEDVQLKWLRISETAFLLWVLAALVFAWLIVALVLLLV
Ga0247794_1006965923300024055SoilVAEGNGTEKVERRTNEAPRRVWFHVEDVQLKWLRISETAFLLWVLAALVFAWLIVALVLLLV
Ga0207709_1017476123300025935Miscanthus RhizosphereSASAPYNQSMAEGDRTENVEPRAGDAPRRVWFHLEEVELRWLRISETAFLLWVLAGLVLAWLIVALVFLL
Ga0207667_1178776513300025949Corn RhizosphereGRTIRPVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLV
Ga0209811_1016277923300027821Surface SoilVAEGNRNENVESPAAKPPRRIWFHLEEVQLSWLRISETAFLLWVLAGLVLVWLIAAVLLLLL
Ga0207428_1003568043300027907Populus RhizosphereVADGNGSENVEQPPAEAPRRVWFHIEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLV
Ga0307295_1002246723300028708SoilDRTENVEPRAGDAPRRFWFHLEEVELRWLRISETAFLLWVLAALVLAWLIVALVFLL
Ga0307298_1010206923300028717SoilMAEGDRTENVEPRAGDAPRRFWFHLEEVELRWLRISETAFLLWVLAALVLAWLIVALVFL
Ga0307307_1030934823300028718SoilVAEGNRNENVEPRPAKPRRMWFHLEEVELNWLRISETAFLLWVLAALVLAWLIVALVFLL
Ga0307280_1037764923300028768SoilMADGDRTENVEPRAGDAPRRLWFHLEEVELKWLRMSEAAFLLWVLVALVLAWLIVALVFL
Ga0307323_1004265923300028787SoilVAEGNRSENVEPRTGEASRRFWYRLEEVELKWLRISEGAFLLWVLAALVLAWLIVALLFL
Ga0307292_1001602433300028811SoilVAEGNRNENVEPRPAKPPRRIWFHLEEVELSWLRISEAAFLLWVLAALVLAWLIAAVLLLGG
Ga0307292_1014631023300028811SoilVAEGNRNENVEPRPAKPRRLWFHLEEVELNWLRISETAFLLWVLAALVLAWLIVALVFLL
Ga0307296_1024351123300028819SoilVEPRTGEAPRRFWYHLEEVELKWLRISEGAFLLWVLAALVLAWLIVALLFLL
Ga0307289_1008138313300028875SoilMAEGDRTENVEPRAGDAPRRFWFHLEEVELRWLRISETAFLLWVLAALVLAWLIV
Ga0247826_1059356923300030336SoilMAEGDRTEDVEPRAGDAPRRVWFHLEEVELKWLRISETAFLLWVLAALVLAWLIVALVFL
Ga0307497_1061341123300031226SoilVAEGNRNENIESPAAKPPRRIWFHLEEVQLSWLRISETAFLLWVLAGLVLVWLIAAVLLLLL
Ga0307408_10161510023300031548RhizosphereVADGNGSEKLEQRPAEAPRRIWFHVEDVELKWLRISEAAFLLWVLAGLVLAWLVVALVFLLL
Ga0308175_10038173323300031938SoilVADGDGTEKLEPRSNEAPRRVWFHFEEVELKWLRISETAFLLWVLAALVFAWLIVALVFLLL
Ga0308175_10288254023300031938SoilVADGNGNENLEQRPAEAPRRIWFHVQEVELKWLRISEAAFLLWVLAGLVLAWLVVALVFLLL
Ga0310902_1095723223300032012SoilVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVFLLV
Ga0307415_10009968533300032126RhizosphereVADGNGSENVEQRPAEAPRRIWFHMEEVELKWLRISEAAFLLWVLAGLVLAWLVVALVFLLR
Ga0247829_1015530733300033550SoilVADGNGSENVEQRPAEAPRRVWFHVEDVELKWLRIGETAFLLWVLAGLVLAWLVVALVF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.