Basic Information | |
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Family ID | F105511 |
Family Type | Metagenome |
Number of Sequences | 100 |
Average Sequence Length | 39 residues |
Representative Sequence | SAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED |
Number of Associated Samples | 91 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 100.00 % |
% of genes from short scaffolds (< 2000 bps) | 85.00 % |
Associated GOLD sequencing projects | 85 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (54.000 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (23.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (70.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (82.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 10.26% β-sheet: 0.00% Coil/Unstructured: 89.74% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Seawater Seawater Marine Marine Surface Seawater Seawater Background Seawater Marine Aqueous Seawater Sackhole Brine Freshwater To Marine Saline Gradient Marine Seawater Salt Marsh Marine Marine Estuarine Water Pelagic Marine Seawater Marine Seawater Deep Subsurface Saline Lake Saline Water Pond Water Saline Water And Sediment Hypersaline Lake Sediment |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_102409661 | 3300000101 | Marine | KNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED* |
SI39nov09_120mDRAFT_10309811 | 3300000167 | Marine | MDASKFSKGVARIKENRDVKENLLKIKDGDYKED* |
JGI11705J14877_100682072 | 3300001419 | Saline Water And Sediment | NSALKNMDASKFSKGVARIKENRDIKQNVLKIRDGEYQED* |
JGI24003J15210_101767102 | 3300001460 | Marine | FNSALKNMDASKFSKGVARIKENKDVKENVLKIKDGEYQED* |
Ga0066862_101493962 | 3300005521 | Marine | HSSIKNMDAKKFARGVARIKENKDIKDNVLKIKDGEYKED* |
Ga0066841_100600042 | 3300005599 | Marine | SIKNMDASKFSKGVARIKENKHIKDNVLKIKDGEYKED* |
Ga0075108_101952642 | 3300005913 | Saline Lake | IKNMDASKFSRGVARIKENQDIKENVLKIKDGEYKED* |
Ga0066370_102608142 | 3300005971 | Marine | KKFNSALKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED* |
Ga0075446_100555652 | 3300006190 | Marine | FNSAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED* |
Ga0068499_12476352 | 3300006327 | Marine | IKNMDSNKFARGVARIKENKHIKDNVLKIKDGEYKED* |
Ga0098035_12335791 | 3300006738 | Marine | IKNMDASKFSKGVARIKENKHIKDNVLKIKEGEYKED* |
Ga0098042_11412041 | 3300006749 | Marine | NMDASKFTKGVARIKENRDVKENLLKIKDGEYKED* |
Ga0098054_11772702 | 3300006789 | Marine | FNSAIKNMDASKFSKGVARIKENKDIKDNILKIKDGEYKED* |
Ga0070750_103766572 | 3300006916 | Aqueous | ALKNMDASKFSKGVARIKENRDVKENMLKIKDGEYKED* |
Ga0098051_12100722 | 3300006924 | Marine | KNMDASKFSKGVARIKENQDIKKNVLKIKDGEYKED* |
Ga0098046_10338991 | 3300006990 | Marine | NMDASRFSKGVARIKENRDVKENLLKIKDGEYKED* |
Ga0102945_10242431 | 3300007609 | Pond Water | SAIKNMDASKFSKGVARIKENRDVKENLLKIRDGDYRED* |
Ga0105664_10367272 | 3300007756 | Background Seawater | FHSSIKNMDSNKFARGVARIKENKHIKDNVLKIKDGDYKED* |
Ga0099850_12709201 | 3300007960 | Aqueous | KKFNSALKNMDASKFSKGVARIKENRDIKENVLKIRDGEYQED* |
Ga0075480_101283212 | 3300008012 | Aqueous | AIKNMDASKFSKGVARIKENRDVKENLLKIKDGEYRED* |
Ga0102960_12515591 | 3300009000 | Pond Water | KFNSAIKNMDASKFSRGVARIKENQDIKKNVLKIKDGEYRED* |
Ga0102963_10819902 | 3300009001 | Pond Water | SALKNMDASKFSKGVARIKENRDIKENVLKIRDGEYQED* |
Ga0114993_111343901 | 3300009409 | Marine | AIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYEED* |
Ga0115545_12074482 | 3300009433 | Pelagic Marine | ALKNMDASKFSKGVARIKENRDVKQNLLKIKDGEYRED* |
Ga0115559_10603351 | 3300009438 | Pelagic Marine | EKKFNSALKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED* |
Ga0115559_12713362 | 3300009438 | Pelagic Marine | MDASKFSKGVARIKENQDIKANVLKIKDGEYKED* |
Ga0115558_13844072 | 3300009449 | Pelagic Marine | NSALKNMDASKFSKGVARIKENRDGKENVLKIKDGEYRED* |
Ga0115554_10529101 | 3300009472 | Pelagic Marine | SAIKNMDASKFSKGVARIKENRDVKENLLKIKDGEYKED* |
Ga0115003_101656152 | 3300009512 | Marine | MDASKFSKGVARIKENQDIKNNVLKIKDGDYKED* |
Ga0115004_106617932 | 3300009526 | Marine | FNSAIKNMDASKFSKGVARIKENQDIKKNVLKIKDGEYRED* |
Ga0114999_105706032 | 3300009786 | Marine | FNSAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYEED* |
Ga0098061_10320651 | 3300010151 | Marine | SAIKNMDASKFAKGVARIKENKDIKDNVLKIKDGDYKED* |
Ga0129345_11305661 | 3300010297 | Freshwater To Marine Saline Gradient | KKFNSALKNMDASKFSKGVARIKENRDIKDNVLKTIDGEYQED* |
Ga0114934_104586421 | 3300011013 | Deep Subsurface | MDASKFSKGVARIKENKDVKENVLKIKDGEYKDD* |
Ga0160422_100433111 | 3300012919 | Seawater | KNMDASKFTKGVARIKENKDIKNNVLKIKDGEYQEE* |
Ga0160422_104464961 | 3300012919 | Seawater | SAVKNMDASKFSKGVARIKENRDVKNNVLKIKDGEYKED* |
Ga0163179_100142081 | 3300012953 | Seawater | KFNSALKNMDASKFSKGVARIKENKDVKENVLKIKDGEYKED* |
Ga0163179_100836354 | 3300012953 | Seawater | NSAIKNMDASKFSKGVARIKENKDVKNNILKIKDGEYKED* |
Ga0163179_102445082 | 3300012953 | Seawater | AMDSKKFSKGVARIKEYKDIKENVLKTIDGEYKED* |
Ga0163111_100516141 | 3300012954 | Surface Seawater | NMDASKFSKGVARIKENKDVKNNVLKIKDGEYQED* |
Ga0181391_10421931 | 3300017713 | Seawater | NMDASKFSKGVARIKENRDVKENVLKIKDGEYKED |
Ga0181390_10180144 | 3300017719 | Seawater | FNSAIKNMDASKFSKGVARIKENKDVKENVLKIKDGEYKED |
Ga0181390_10999571 | 3300017719 | Seawater | NSALKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED |
Ga0181398_11090991 | 3300017725 | Seawater | KKFNSALKNMDASKFSKGVARIKENKDVKENVLKIKDGEYKED |
Ga0187219_10348941 | 3300017751 | Seawater | NMDASKFSKGVARIKENQDIKKNVLKIKDGEYKED |
Ga0181414_10093211 | 3300017759 | Seawater | NSAIKNMDASKFSKGVARIKENKDVKENVLKIKDGEYKED |
Ga0181589_107525421 | 3300017964 | Salt Marsh | ALKNMDASKFSKGVARIKENRDIKQNVLKIRDGEYNED |
Ga0181590_100368361 | 3300017967 | Salt Marsh | EKKFNSALKNMDASKFSKGVARIKENRDIKQNVLKIRDGEYKED |
Ga0181590_109706141 | 3300017967 | Salt Marsh | EKKFNSALKNMDASKFSKGVARIKENRDIKQNVLKIRDGEYQED |
Ga0181569_108775892 | 3300017986 | Salt Marsh | SALKNMDASKFTKGVARLKENREIKQNVLKIKDGEYKED |
Ga0180432_109694501 | 3300017989 | Hypersaline Lake Sediment | KKFNSALKNMDASKFSKGVARIKENKDIKQNVLKTIDGEYQED |
Ga0181559_104927821 | 3300018415 | Salt Marsh | KKFNSAIRNMDASKFSKSVARIKENKEVKNNLKTIDGEYKED |
Ga0181593_106245671 | 3300018423 | Salt Marsh | ALKNMDASKFSKGVARIKENQDIKQNVLKIRDGEYQED |
Ga0181562_103201532 | 3300019459 | Salt Marsh | SALKNMDASKFSKGVARIKENRDIKNNVLKIKDGEYQED |
Ga0206124_100825771 | 3300020175 | Seawater | ALKNMDASKFTKGVARIKENRDVKENVLKIKDGEYKED |
Ga0211686_100938782 | 3300020382 | Marine | SAIKNMDASKFSKGVARIKENQDIKNNILKIKDGEYKED |
Ga0211636_101807062 | 3300020400 | Marine | IKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED |
Ga0211617_100469001 | 3300020401 | Marine | SAIKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED |
Ga0211521_101102752 | 3300020428 | Marine | KNMDASKFSKGVARIKENRDVKENVLKIKDGEYQED |
Ga0211691_101583972 | 3300020447 | Marine | HSSIKNMDSNKFARGVARIKENKHIKDNVLKIKDGEYKED |
Ga0211691_103798052 | 3300020447 | Marine | HSSIKNMDSNKFSKGVARIKENKDIKDNVLKIKDGEYKED |
Ga0211643_100872183 | 3300020457 | Marine | ALKNMDASKFSKGVARIKENKDVKNNVLKIKDGEYKED |
Ga0211714_105938762 | 3300020466 | Marine | AIKNMDASKFSKGVNRIKENKDIKDNVLKIKDGEYKED |
Ga0211577_108938782 | 3300020469 | Marine | LEKKFNSALKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED |
Ga0222718_104731651 | 3300021958 | Estuarine Water | SALKNMDASKFSKGVARIKENRDIKQNVLKTIDGEYQED |
Ga0222719_100738371 | 3300021964 | Estuarine Water | KKFNSALKNMDASKFSKGVARIKENRDIKQNVLKIKDGEYKED |
Ga0222719_105721042 | 3300021964 | Estuarine Water | EKKFNSALKNMDASKFSKGVARIKENKDIKQNVLKTVDGEYQED |
Ga0187827_102544483 | 3300022227 | Seawater | NMDASKFSKGVARIKENKHIKDNVLKIKDGEYKED |
Ga0222653_10139773 | 3300022857 | Saline Water | AAIKNMDASKFSRGVARIKENQYIKKNVLKIKDGEYKED |
Ga0255756_11843412 | 3300022905 | Salt Marsh | NMDASKFSKGVARIKENKDIKQNVLKIKDGEYKED |
Ga0255784_104934321 | 3300023108 | Salt Marsh | NSAIRNMDASKFSKSVARIKENKEVKNNLKTIDGEYKED |
Ga0255743_105210341 | 3300023110 | Salt Marsh | FNSALKNMDASKFSKGVARIKENKDIKQNVLKIKDGEYKED |
Ga0255772_100369151 | 3300023176 | Salt Marsh | LKNMDASKFSKGVARIKENKDIKQNVLKIRDGEYQED |
Ga0222664_10375592 | 3300023296 | Saline Water | FNSAIKNMDASKFSRGVARIKENQDIKNNVLKIKDGEYRED |
Ga0228658_10280693 | 3300024297 | Seawater | EKKFNSALKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED |
Ga0209336_100983941 | 3300025137 | Marine | AIKNMDASKFSRGVARIKENQDIKNNVLKIKDGEYQED |
Ga0208148_10766082 | 3300025508 | Aqueous | NSAIKNMDASKFSKGVARIKENRDVKENLLKIKDGEYKED |
Ga0208899_10960791 | 3300025759 | Aqueous | LEKKFNSALKNMDASKFSKGVARIKENKDIKQNVLKIRDGEYQED |
Ga0208425_10525252 | 3300025803 | Aqueous | KKFNSALKNMDASKFSKGVARIKENKDIKQNVLKIRDGEYQED |
Ga0209600_11088241 | 3300025821 | Pelagic Marine | IKNMDASKFSKGVARIKENRDVKENLLKIKDGEYKED |
Ga0208128_10115461 | 3300026186 | Marine | RFHSAIKNMDASKFSKGVARIKENKHIKDNVLKIKDGEYKED |
Ga0209071_10399151 | 3300027686 | Marine | AIKHMDASKFSKGVARIKENKDVKENVLKIKDGEYKED |
Ga0209192_100134835 | 3300027752 | Marine | KFNSAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED |
Ga0209709_100358614 | 3300027779 | Marine | FNSAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED |
Ga0209089_103495861 | 3300027838 | Marine | AIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYEED |
Ga0209402_105628732 | 3300027847 | Marine | SAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED |
Ga0233450_103420351 | 3300028115 | Salt Marsh | EKKFNSALKNMDASKFSKGVARIRENRDVKENVLKIKDGEYKED |
Ga0257122_11299461 | 3300028177 | Marine | DTAFKLEKKFNSAIKNMDASKFSKGVARIKENRDVKENLLKIRDGDYRED |
Ga0257108_11481852 | 3300028190 | Marine | LEKRFHSSIKNMDAKKFSRGVARIKENKDIKDNILKIKDGEYKED |
Ga0257107_10581191 | 3300028192 | Marine | KNMDSNKFSKGVARIKENKDIKDNVLKIKDGEYKED |
Ga0257107_11114191 | 3300028192 | Marine | FHSSIKNMDSNKFSKGVARIKENKDIKDNVLKIKDGEYKED |
Ga0308010_10119176 | 3300031510 | Marine | KLEKRFNSAIKHMDASKFSKGVARIKENKDVKENVLKIKDGEYKED |
Ga0307488_101058773 | 3300031519 | Sackhole Brine | KNMDASKFSRGVARIKENQDIKNNVLRIKDGEYKED |
Ga0308019_102442541 | 3300031598 | Marine | SAIKHMDASKFSKGVARIKENKDVKENVLKIKDGEYKED |
Ga0302132_101899321 | 3300031605 | Marine | NMDASKFSRGVARIKENQDIKDNVLKIKDGEYKED |
Ga0302123_102935841 | 3300031623 | Marine | HSSIKNMDSNKFSKGVARIKENKDIKNNVLKIKDGEYKED |
Ga0302117_103925971 | 3300031639 | Marine | NSAIKNMDASKFSRGVARIKENQDIKNNVLKIKDGEYRED |
Ga0315328_101771052 | 3300031757 | Seawater | KRFHSSIKNMDASKFSKGVARIKENKDIKNNVLKIKDGEYKED |
Ga0310122_104425452 | 3300031800 | Marine | NMDGNKFTKGIARIKENKDVKDNVLKIKDGEYKED |
Ga0310125_101180621 | 3300031811 | Marine | KRFHSSIKNMDSNKFARGVARIKENKHIKDNVLKIRDGEYKED |
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