NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F105484

Metagenome Family F105484

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105484
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 132 residues
Representative Sequence MNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Number of Associated Samples 88
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 56.00 %
% of genes near scaffold ends (potentially truncated) 57.00 %
% of genes from short scaffolds (< 2000 bps) 74.00 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (83.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(29.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204
1SwRhRL2b_0828.00002420
2SwBSRL2_0549.00004120
3JGI11643J11755_116806212
4JGI10214J12806_100462263
5F14TB_1002828631
6JGI24737J22298_100923621
7JGI26145J50221_10021202
8JGI26132J50249_1011642
9Ga0065714_105118181
10Ga0065704_101131302
11Ga0065715_102104361
12Ga0070683_1009337072
13Ga0070670_1000247211
14Ga0070671_1011556211
15Ga0070701_104982631
16Ga0070711_1000281752
17Ga0070694_1017532941
18Ga0070708_1012146492
19Ga0070672_1000403371
20Ga0070693_1000548803
21Ga0070665_1011865031
22Ga0068855_1005564582
23Ga0068861_1001515431
24Ga0081455_100012048
25Ga0075427_100289642
26Ga0079222_126560601
27Ga0075428_1000240225
28Ga0075428_1006937862
29Ga0075428_1023239092
30Ga0075433_102173123
31Ga0075420_1013912052
32Ga0075425_1001140144
33Ga0075425_1012969072
34Ga0075425_1030678081
35Ga0075434_1010879592
36Ga0075434_1016859471
37Ga0075436_1000142973
38Ga0075436_1000488281
39Ga0105243_101029623
40Ga0111538_104078361
41Ga0105092_100892241
42Ga0075423_100158385
43Ga0134122_123690121
44Ga0157334_10145901
45Ga0157299_100076392
46Ga0157295_100106122
47Ga0157298_101610682
48Ga0164300_100949362
49Ga0164298_101733392
50Ga0164303_105513832
51Ga0164303_105761542
52Ga0164299_100388932
53Ga0164299_106881631
54Ga0164301_106883902
55Ga0164302_110247272
56Ga0164302_115392091
57Ga0164309_101828382
58Ga0164308_112102671
59Ga0164304_102474232
60Ga0164305_106950971
61Ga0157377_100050282
62Ga0132256_1000267583
63Ga0132256_1011696652
64Ga0132257_1038947101
65Ga0132255_1000346492
66Ga0132255_1001417292
67Ga0173481_100051782
68Ga0222622_112742721
69Ga0247787_10078712
70Ga0247795_10562922
71Ga0247793_10008451
72Ga0207647_102639392
73Ga0207663_106201942
74Ga0207661_112681861
75Ga0207712_102313452
76Ga0207677_108072782
77Ga0207620_10105792
78Ga0207444_10129841
79Ga0209996_100006812
80Ga0210000_10911561
81Ga0209966_10071212
82Ga0209998_100719442
83Ga0209178_11630531
84Ga0209974_100001091
85Ga0268266_109749782
86Ga0310888_100769362
87Ga0310887_103940312
88Ga0310886_100328972
89Ga0310813_105705411
90Ga0310892_100406173
91Ga0310900_101249591
92Ga0310884_102030951
93Ga0310906_103677322
94Ga0310906_114627721
95Ga0310899_100194203
96Ga0310890_107728352
97Ga0307470_111919061
98Ga0310896_100121834
99Ga0310810_100834462
100Ga0247830_117223531
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 69.78%    β-sheet: 0.00%    Coil/Unstructured: 30.22%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120MNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFLExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
83.0%17.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Soil
Terrestrial Soil
Switchgrass Rhizosphere
Soil
Soil
Agricultural Soil
Soil
Hardwood Forest Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
20.0%3.0%12.0%6.0%3.0%3.0%7.0%15.0%4.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL2b_0828.000024202162886007Switchgrass RhizosphereMKRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
SwBSRL2_0549.000041202162886013Switchgrass RhizosphereMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
JGI11643J11755_1168062123300000787SoilMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDDNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
JGI10214J12806_1004622633300000891SoilATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
F14TB_10028286313300001431SoilPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL*
JGI24737J22298_1009236213300001990Corn RhizosphereLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
JGI26145J50221_100212023300003371Arabidopsis Thaliana RhizosphereMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
JGI26132J50249_10116423300003405Arabidopsis Thaliana RhizosphereCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0065714_1051181813300005288Miscanthus RhizosphereMNRTSPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSSDYNLTMRWIQPILGQAIVEDALIRQHSIDGGSATQLLEGVSKLDPSSVQWVLGRIIVELNRSRLISGLRGRPNDDQRIGAIARYAAEQFL*
Ga0065704_1011313023300005289Switchgrass RhizosphereMKRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0065715_1021043613300005293Miscanthus RhizosphereMNRTSPTTDLFTLIGMMATIAGILLCLFFLFTPATFGAMETNAMIDRSSDYNLTMRWIQPILGQAIVEDALIRQHSIDGGSATQLLEGVSKLDPSSVQWVLGRIIVELNQSRLVSGLPGHPNDDHRIGAIARYAAEQFL*
Ga0070683_10093370723300005329Corn RhizosphereTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0070670_10002472113300005331Switchgrass RhizosphereMNRTSPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRIIVELNRSRLISGLRGRPNDDQRIGAIARYAAEQFL*
Ga0070671_10115562113300005355Switchgrass RhizosphereMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0070701_1049826313300005438Corn, Switchgrass And Miscanthus RhizosphereFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0070711_10002817523300005439Corn, Switchgrass And Miscanthus RhizosphereMDRTSPTTDLFTLIGMMATIAGILLCLFFLFTPATFGAVDTSAMIERSSDHNLTMRWIQPILGQAIVEDALIRQRSIAAGGTTPLLEGVSKLDPSSVQWVLGRIIVELNRSRLSSGLPGRPNDDHRIGAIARYAAEQFL*
Ga0070694_10175329413300005444Corn, Switchgrass And Miscanthus RhizosphereMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRL
Ga0070708_10121464923300005445Corn, Switchgrass And Miscanthus RhizosphereMNRTGPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLSGRPNDDQRIGAIARYAAEQFL*
Ga0070672_10004033713300005543Miscanthus RhizosphereRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0070693_10005488033300005547Corn, Switchgrass And Miscanthus RhizosphereMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0070665_10118650313300005548Switchgrass RhizosphereMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAE
Ga0068855_10055645823300005563Corn RhizosphereNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0068861_10015154313300005719Switchgrass RhizosphereMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAI
Ga0081455_1000120483300005937Tabebuia Heterophylla RhizosphereMNRTSQTTDVFTLIGMMATITGILVCLFFLFTPVTFGAMDRNAMIGPSPDLHLSMRWIQPILGQAIVEDALIRQRSSHVAGVTPLFEDSSKLAPGSVQWLLGRVIVELNRSRLVSSLPGHPRDDQRIVTIARHTAEQFL*
Ga0075427_1002896423300006194Populus RhizosphereMKRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLSGRPNDDQRIGAIARYAAEQFL*
Ga0079222_1265606013300006755Agricultural SoilMDRTSLTTDPFTLIGMMATIAGILLCLFFLFTPATFGAVETGAMIERSSDHNLTMRWIQPILGQAIVEDALIRQRSIAAGGTTPLLEGASKLDPSSVQWVLGRIIVELNRSRLSSG
Ga0075428_10002402253300006844Populus RhizosphereFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0075428_10069378623300006844Populus RhizosphereMNRTSPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSSDYNLTMRWIQPILGQAIVEDALIRQRSVDGGSATQLLVEGVSKLDPSSVQWVLGRIIVELNRSRLVSGLPGHSNDDHRIGAIARYAAEQFL*
Ga0075428_10232390923300006844Populus RhizosphereFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDDNLTMRWIQPILGRAIVEDALIRQHSLDAGSATQLFEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0075433_1021731233300006852Populus RhizosphereTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0075420_10139120523300006853Populus RhizosphereMFVVRSVRDGTVLADQRRMSGAQELIGGPMNRTSPTIDLFTLIGMMATIAGIFLCLFFLFTPTTFGAPALDVLQDRSADLYISMRWLQPTLGQAIVEDALIRQRDNDAFGAVMLEPGAGSVQWVIGRVVVEL
Ga0075425_10011401443300006854Populus RhizosphereSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0075425_10129690723300006854Populus RhizosphereMDRTSLTTDLFTLIGMMATIAGILLCLFFLFTPATFGAVETGAMIERSSDHNLTMRWIQPILGQAIVEDALIRQRSIAAGGTTPLLEGASKLDPSSVQWVLGRIIVELNRSRLSSGLPGRPNDDHRIGAIARYAAEQFL*
Ga0075425_10306780813300006854Populus RhizosphereESMFTSVERDLLKALCQQGRVEMRDDGGRMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL*
Ga0075434_10108795923300006871Populus RhizosphereILLCLFFLFTPATFGAVETGAMIERSSDHNLTMRWIQPILGQAIVEDALIRQRSIAAGGTTPLLEGASKLDPSSVQWVLGRIIVELNRSRLSSGLPGRPNDDHRIGAIARYAAEQFL*
Ga0075434_10168594713300006871Populus RhizosphereGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGHSNDDHRIGAIARYAAEQFL*
Ga0075436_10001429733300006914Populus RhizosphereMNRTSATTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0075436_10004882813300006914Populus RhizosphereMDRTSLTTDLFTLIGMMATIAGILLCLFFLFTPATFGAVETGAMIERSSDHNLTMRWIQPILGQAIVEDALIRQRSIAAGGTTPLLEGASKLDPSSVQWVLGRIIVELNRSRLSSSLPGRPNDDHRIGAIARYAAEQFL*
Ga0105243_1010296233300009148Miscanthus RhizosphereMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLSGRPNDDQRIGAIARYAAEQFL*
Ga0111538_1040783613300009156Populus RhizosphereTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDDNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0105092_1008922413300009157Freshwater SedimentPIPLILTMIGMMASITGILLCLFFLFTPVTFGAMGTNTMTDRSPDLHISMRWIQPILGQAIVEDALIRQRSNAFNAARFLEESSRPAPGSVQWVVGRVIVELNRSRMVSGLPTGGRQKDDQRIVTIARYAAEQLQEGVVDKERLTANVDLTF*
Ga0075423_1001583853300009162Populus RhizosphereMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDDNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0134122_1236901213300010400Terrestrial SoilMDRPNPKTDLFTLIGMMATIAGIFMCLFFLFTPATFGAVETSGMIDRSPDLQLSMRWIQPILGQAIVEDAVIRQHAIDAGATVVDRMSKPASGSIQWVLGRIIVELNRSRMVV
Ga0157334_101459013300012509SoilMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL*
Ga0157299_1000763923300012899SoilMKRTSPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSSDYNLTMRWIQPILGQAIVEDALIRQRSVDGGSATQLLVEGVSKLDPSSVQWVLGRIIVELNRSRLVSGLPGHSNDDHRIGAIARYAAEQFL*
Ga0157295_1001061223300012906SoilMKRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQSILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0157298_1016106823300012913SoilVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0164300_1009493623300012951SoilMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL*
Ga0164298_1017333923300012955SoilMDRISPTTDLFTLVGMMATIAGILVCLFFLFTPVTFGAMETNVMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSIEAGSAPQRLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDHRIGAIARYAAEQFL*
Ga0164303_1055138323300012957SoilMMATIAGILLCLFFLFTPATFGAMETNAVIDRSSDDNLTMRWIQPILGQAIVEDSLIRQRAIDVGSATPLLEGVSKLDPSSVQWVLGRVIVELNRSRLSSGLPGRPNDDHRIGAIARYAA
Ga0164303_1057615423300012957SoilMNRTNPTTDLFTLIGMMATIAGILLCLCFLFTPVTFGAMDTNAMIDRSLDHNITMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLSSGLPGRPNDDHRIGAIARYAAEQFL*
Ga0164299_1003889323300012958SoilMMATIAGILLCLFFLFTPATFGAMETNAVIDRSSDDNLTMRWIQPILGQAIVEDALIRQRTIDAGSATPLLPGVSKLDPSSVQWVLGRVIVELNRSRLSSGLPGRPNDDHRIGAIARYAAEQFL*
Ga0164299_1068816313300012958SoilMDRISPTTDLFTLVGMMATIAGILVCLFFLFTPVTFGAMETNVMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSIEAGSAAQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLP
Ga0164301_1068839023300012960SoilMMATIAGILLCLFFLFTPATFGAMETNAVIDRSSDDNLTMRWIQPILGQAIVEDALIRQRTIDAGSATPLLEGVSKLDPSSVQWVLGRVIVELNRSRLSSGLPGRPNDDHRIGAIARYAAEQFL*
Ga0164302_1102472723300012961SoilMDRISPTTDLFTLVGMMATIAGILVCLFFLFTPVTFGAMETNVMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSIEAGSAAQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGL
Ga0164302_1153920913300012961SoilMMATIAGILPCLFFLFTPATFGAMETNAVIDRSSDDNLTMRWIQPILGQAIVEDALIRQRTIDAGSATPLLEGVSKLDPSSVQWVLGRVIVELNRSRLSSGLPGRPNDDHRIGAIARYAAEQFL*
Ga0164309_1018283823300012984SoilMDRISPTTDLFTLVGMMATIAGILVCLFFLFTPVTFGAMETNVMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSIEAGSAAQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDHRIGAIARYAAEQFL*
Ga0164308_1121026713300012985SoilMDRISPTTDLFTLVGMMATIAGILVCLFFLFTPVTFGAMETNVMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSIEAGSAAQLLEGVSKLDPSSVQWVLGRVIVELNRSRLIS
Ga0164304_1024742323300012986SoilMDRISPTTDLFTLVGMMATIAGILLCLFFLFTPATFGAMETNAVIDRSSDDNLTMRWIQPILGQAIVEDALIRQRTIDAGSATPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDHRIGAIARYAAEQFL*
Ga0164305_1069509713300012989SoilMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLIS
Ga0157377_1000502823300014745Miscanthus RhizosphereMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRIIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0132256_10002675833300015372Arabidopsis RhizosphereMFTSVERDLLKALCQQGRVEMRDDGGRMNRTNPTTDLFTLIGMMATVAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL*
Ga0132256_10116966523300015372Arabidopsis RhizosphereLFTPVTLGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0132257_10389471013300015373Arabidopsis RhizosphereMDRANPTTDLFTLIGMMATIAGIFTCLFFLFTPATFGAVETSAMIDRSPDLQLSMRWIQPILGQAIVEDAVIRQHTINAGATGADPMSSPASGSIQWVLGRVIVELSRS
Ga0132255_10003464923300015374Arabidopsis RhizosphereMFTSVERDLLKALCQQGRVEMRDDGGRMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDGGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL*
Ga0132255_10014172923300015374Arabidopsis RhizosphereMNRTSPTTDLFTLVGMMATIAGILVCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL*
Ga0173481_1000517823300019356SoilMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0222622_1127427213300022756Groundwater SedimentSPMTDLLTLIGMMATITGILLCLFFLFTPVTFGATETNALIDRSPDLGTSMRWIQPILGQAIVEDALIRQRSNEAAGDTPFLEGSKPGAGSVQWMLGRVIVELNRSRMVSGLPAGGHDKDNARIIAIARHAAEQFQEGAGGEGRMIERMTGRTDRMF
Ga0247787_100787123300022893SoilSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0247795_105629223300022899SoilFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0247793_100084513300023066SoilMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLSGRPNDDQRIGAIARYAAEQFL
Ga0207647_1026393923300025904Corn RhizosphereMNRTSPTTDLFTLVGMTATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIA
Ga0207663_1062019423300025916Corn, Switchgrass And Miscanthus RhizosphereTDLFTLIGMMATIAGILLCLFFLFTPATFGAVDTSAMIERSSDHNLTMRWIQPILGQAIVEDALIRQRSIAAGGTTPLLEGVSKLDPSSVQWVLGRIIVELNRSRLSSGLPGRPNDDHRIGAIARYAAEQFL
Ga0207661_1126818613300025944Corn RhizosphereTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0207712_1023134523300025961Switchgrass RhizosphereMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGGSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0207677_1080727823300026023Miscanthus RhizosphereDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDDNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0207620_101057923300026873SoilGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0207444_101298413300026900SoilATIAGILVCLFFLFTPVTFGAMETNTMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0209996_1000068123300027395Arabidopsis Thaliana RhizosphereMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDDNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0210000_109115613300027462Arabidopsis Thaliana RhizosphereMNRTSPTTDLFTLIGMMASIAGVLLCLFLLFTPVTFGAMGTSTMIDRSPDLGISMRWIQPILGQAIVEDALIRQRANDASSATSFLEESSRPASGSVQWVVGRVIVELNRSRMVSGLPGGGR
Ga0209966_100712123300027695Arabidopsis Thaliana RhizosphereMKRNSHGTDFLTLIGMMASIAGVLLCLFLLFTPVTFGAMGTSTMIDRSPDLGISMRWIQPILGQAIVEDALIRQRAKDASSATSFLEESSRPAPGSVQWVVGRVIVELNRSRMVSGLPGGGRQKDDQRIVTIARHAGERFQEGVVVNVGLTANVNLMF
Ga0209998_1007194423300027717Arabidopsis Thaliana RhizosphereMKRNSHGTDFLTLIGMMASIAGVLLCLFLLFTPVTFGAMGTSTMIDRSPDLGISMRWIQPILGQAIVEDALIRQRANDASSATSFLEESSRPAPGSVQWVVGRVIVELNRSRMVSGLPGGGRQK
Ga0209178_116305313300027725Agricultural SoilMEICMEICMDRANPTTDLFTLIGMMATIAGIFTCLFFLFTPATFGAVETSAMIDRSPDLQLSMRWIQPILGQAIVEDAVIRQHTINAGATGADPMSSPASGSIQWVLGRVIVEL
Ga0209974_1000010913300027876Arabidopsis Thaliana RhizosphereRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0268266_1097497823300028379Switchgrass RhizosphereMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL
Ga0310888_1007693623300031538SoilMNRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPG
Ga0310887_1039403123300031547SoilMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL
Ga0310886_1003289723300031562SoilMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0310813_1057054113300031716SoilMNRTSPTTDLFTLIGMMATIAGILLCLFFLFTPATFGAMETNAMIDRSSDYNLTMRWIQPILGQAIVEDALIRQHSIDGGSATQLLEGVSKLDPSSVQWVLGRIIVELNQSRLVSGLPGHPNDDHRIGAIARYAAEQFL
Ga0310892_1004061733300031858SoilPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0310900_1012495913300031908SoilMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL
Ga0310884_1020309513300031944SoilMNRTNPTTDLFTLIGMMATVAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL
Ga0310906_1036773223300032013SoilLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0310906_1146277213300032013SoilMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISG
Ga0310899_1001942033300032017SoilKRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL
Ga0310890_1077283523300032075SoilMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLI
Ga0307470_1119190613300032174Hardwood Forest SoilMDRISPTTDLFTLVGMMATIAGILVCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL
Ga0310896_1001218343300032211SoilSMFTSVERDLLKALCQQGRVEMRDDGGRMNRTNPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSLDHNLTMRWIQPILGQAIVEDAVIRQRSIDAGSAAPLLEGVSKLDPSSVQWVLGRVIVELNRSRLISGLPGRSNDDHRIGAIARYAAEQFL
Ga0310810_1008344623300033412SoilMNRTSPTTDLFTLIGMMATIAGILLCLFFLFTPVTFGAMETNAMIDRSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRIIVELNRSRLISGLRGRPNDDQRIGAIARYAAEQFL
Ga0247830_1172235313300033551SoilMKRTSPTTDLFTLVGMMATIAGILLCLFFLFTPVTFGAMETNAMIERSSDYNLTMRWIQPILGQAIVEDALIRQHSLDAGSATQLLEGVSKLDPSSVQWVLGRIIVELNRSRLISGLPGRPNDDQRIGAIARYAAEQFL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.