NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105482

Metagenome / Metatranscriptome Family F105482

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105482
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 54 residues
Representative Sequence VDLIHPSSKADVVEAVRDANATARRLLVVGGRRHLDKGNPSEVDAELWTTQLDRLVAY
Number of Associated Samples 97
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 96.00 %
% of genes from short scaffolds (< 2000 bps) 93.00 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (80.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(19.000 % of family members)
Environment Ontology (ENVO) Unclassified
(21.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(32.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.28%    β-sheet: 8.14%    Coil/Unstructured: 75.58%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02913FAD-oxidase_C 89.00
PF01565FAD_binding_4 4.00
PF00581Rhodanese 2.00
PF00873ACR_tran 1.00
PF01909NTP_transf_2 1.00
PF01661Macro 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 89.00
COG2110O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domainTranslation, ribosomal structure and biogenesis [J] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.00 %
UnclassifiedrootN/A20.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig814135All Organisms → cellular organisms → Bacteria1300Open in IMG/M
3300000956|JGI10216J12902_109404420All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300001431|F14TB_100512302Not Available686Open in IMG/M
3300002459|JGI24751J29686_10004021All Organisms → cellular organisms → Bacteria2976Open in IMG/M
3300003987|Ga0055471_10207334All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300004145|Ga0055489_10314411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium504Open in IMG/M
3300004479|Ga0062595_100816329All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300005343|Ga0070687_100449452All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300005343|Ga0070687_101202650All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005444|Ga0070694_101114497Not Available659Open in IMG/M
3300005467|Ga0070706_101556702All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300005467|Ga0070706_101979855All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300005549|Ga0070704_100153422All Organisms → cellular organisms → Bacteria1814Open in IMG/M
3300005586|Ga0066691_10892010All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005981|Ga0081538_10112822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1329Open in IMG/M
3300006049|Ga0075417_10536185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria591Open in IMG/M
3300006058|Ga0075432_10008374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3527Open in IMG/M
3300006194|Ga0075427_10037282All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300006573|Ga0074055_11826225All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300006577|Ga0074050_12095048All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300006846|Ga0075430_100890084All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300006871|Ga0075434_101665222All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300006969|Ga0075419_10785254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria680Open in IMG/M
3300009081|Ga0105098_10173606Not Available981Open in IMG/M
3300009553|Ga0105249_11502848All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300009810|Ga0105088_1093493Not Available550Open in IMG/M
3300009816|Ga0105076_1002815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2604Open in IMG/M
3300009837|Ga0105058_1012487All Organisms → cellular organisms → Bacteria1700Open in IMG/M
3300010029|Ga0105074_1007849All Organisms → cellular organisms → Bacteria1638Open in IMG/M
3300010029|Ga0105074_1046191Not Available764Open in IMG/M
3300010301|Ga0134070_10129879Not Available894Open in IMG/M
3300010323|Ga0134086_10430208Not Available535Open in IMG/M
3300010329|Ga0134111_10036207Not Available1740Open in IMG/M
3300010335|Ga0134063_10691987All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300012159|Ga0137344_1070038All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300012206|Ga0137380_11750652Not Available505Open in IMG/M
3300012207|Ga0137381_11171374All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300012360|Ga0137375_11443064All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300012957|Ga0164303_10651204All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300012961|Ga0164302_10450439All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300014154|Ga0134075_10392544All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300014308|Ga0075354_1131661All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300015372|Ga0132256_103693725All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300015373|Ga0132257_101599723All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300017974|Ga0187777_11345353All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300018031|Ga0184634_10321857All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300018056|Ga0184623_10456188All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300018072|Ga0184635_10005658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4069Open in IMG/M
3300018077|Ga0184633_10388900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria698Open in IMG/M
3300018078|Ga0184612_10570216All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300018083|Ga0184628_10705746All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300018465|Ga0190269_10539343All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300018466|Ga0190268_12027551Not Available530Open in IMG/M
3300019873|Ga0193700_1067638Not Available534Open in IMG/M
3300020006|Ga0193735_1064695All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300021073|Ga0210378_10359540Not Available542Open in IMG/M
3300021078|Ga0210381_10028447All Organisms → cellular organisms → Bacteria1551Open in IMG/M
3300021412|Ga0193736_1037061All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300022389|Ga0210318_1017850Not Available1053Open in IMG/M
3300022756|Ga0222622_11051696All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300025174|Ga0209324_10213258All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300025326|Ga0209342_10174670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1931Open in IMG/M
3300025910|Ga0207684_11509067All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300025961|Ga0207712_10729421All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300026142|Ga0207698_12231766All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300026324|Ga0209470_1025945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3078Open in IMG/M
3300026327|Ga0209266_1245381All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300026342|Ga0209057_1083645All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300026535|Ga0256867_10225913All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300027277|Ga0209846_1011054Not Available1531Open in IMG/M
(restricted) 3300027799|Ga0233416_10334531Not Available522Open in IMG/M
3300027886|Ga0209486_10877543All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300028381|Ga0268264_10111728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2394Open in IMG/M
3300028528|Ga0210336_1025420All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300028589|Ga0247818_10758823All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300028705|Ga0307276_10041639All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300028719|Ga0307301_10260247All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300028771|Ga0307320_10096838Not Available1119Open in IMG/M
3300028791|Ga0307290_10076927All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300028807|Ga0307305_10266043All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300028811|Ga0307292_10130393All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300028819|Ga0307296_10230643All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300028824|Ga0307310_10581819All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300028878|Ga0307278_10116095All Organisms → cellular organisms → Bacteria1202Open in IMG/M
3300028881|Ga0307277_10417419Not Available600Open in IMG/M
3300030336|Ga0247826_11700411All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300030619|Ga0268386_10296494All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300031547|Ga0310887_10049745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1875Open in IMG/M
3300031949|Ga0214473_10569303Not Available1254Open in IMG/M
3300031995|Ga0307409_100301390All Organisms → cellular organisms → Bacteria1491Open in IMG/M
3300031997|Ga0315278_11982608All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300032075|Ga0310890_10201263All Organisms → cellular organisms → Bacteria1365Open in IMG/M
3300032118|Ga0315277_11288539All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300032164|Ga0315283_10683417Not Available1107Open in IMG/M
3300032179|Ga0310889_10385705All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300033417|Ga0214471_10397303All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300034090|Ga0326723_0264861All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300034165|Ga0364942_0078216All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR111066Open in IMG/M
3300034690|Ga0364923_0135598All Organisms → cellular organisms → Bacteria635Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.00%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand6.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.00%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.00%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere1.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002459Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6Host-AssociatedOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300012159Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014308Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021412Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1EnvironmentalOpen in IMG/M
3300022389Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.24 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300027277Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027799 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MGEnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028528Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.376 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M
3300034690Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_003338602124908045SoilMDLIHPASKADVVDAVRDANARYRRLLVVGGRRHLDKGNPSEVDAEPWTT
JGI10216J12902_10940442013300000956SoilVSPDLLHPSSAADVAEMLAASSADGRRVLVVGGRRHLDKGNPAEVDAELWTTQLD
F14TB_10051230213300001431SoilVDLIHPSTKADVVDAIRDSNTSLLRLLVVGGRRHLDKGNPAEVDAELWTTQLDRLVAYEPAEMIAVVE
JGI24751J29686_1000402153300002459Corn, Switchgrass And Miscanthus RhizosphereVDLIHPTSKADVVDAIRQANATKHRMLVVGGRRHLDKGNPAAVDAELWTTQLDRR
Ga0055471_1020733413300003987Natural And Restored WetlandsVDLIHPHSPEAVATTLAEASRDGVRVLVVGGRTQIDRGNPAEVDAELWT
Ga0055489_1031441123300004145Natural And Restored WetlandsMDLIHPLTKADVVDVVRAANAESRKLLVVGGRRHLDKGNPTEVDAELWTTQLD
Ga0062595_10081632913300004479SoilVDLIHPHTKRDAAEALRAASGLGTRVLVVGGRQHADKGQPSEVDA
Ga0070687_10044945223300005343Switchgrass RhizosphereVETLHPASTAELVDLVRRANEDDRRLLVVGGRRHVDRGNPVEVDAELWTTQLDRLVAYEPAEMI
Ga0070687_10120265013300005343Switchgrass RhizosphereVDLIHPHSKRDVVDALRTASVAETRVLTVGGRQHIDKGNPSEVDAELWTTLLDDRVAYDPAEMLC
Ga0070694_10111449713300005444Corn, Switchgrass And Miscanthus RhizosphereVDLIHPSSRADVVEAVRDANATARRLLVVGGRWHVDKGNPGEVDAELWTTQLDRLVAYE
Ga0070706_10155670223300005467Corn, Switchgrass And Miscanthus RhizosphereVDLIHPHSKRDVVDALRAASAAETRVLIVGGRRHIDKGNPSQVDAELWTTVLDDRVAYDPAEMLCVV
Ga0070706_10197985523300005467Corn, Switchgrass And Miscanthus RhizosphereVDLIHPTSKADVVDAIRQANATKHRMLVVGGRRHLDKGNPAAVDAELWTTQLDR
Ga0070704_10015342233300005549Corn, Switchgrass And Miscanthus RhizosphereVDLIHPHSKRDVIDALRTASDAETRVLTVGGRQHIDKGNPSEVDAELWTTLLDDRVVYDPAEM
Ga0066691_1089201023300005586SoilVDLIHPHAKADVADTLRDASAHGTTVLIVGGRRHMDRGNPVEVDAELWTTQLDG
Ga0081538_1011282223300005981Tabebuia Heterophylla RhizosphereVDLIHPSSTAELVDAVRDANDRLIRLLVVGGRRHIDKGNPSDVDAELWTTQLDSVVA
Ga0075417_1053618523300006049Populus RhizosphereMDLIHPASKADVVDAVRDANASGRSLLVVGGRRHLDKGNPSEVDAEL
Ga0075432_1000837413300006058Populus RhizosphereVDLIHPTSRAGVVEAIRDANATARRLLVIGGRRHVDKGNPAEVDA
Ga0075427_1003728213300006194Populus RhizosphereVDLIHPTSRAGVVEAIREANATARRLLVVGGRRHVDKGNPAEVDAELWTTQLDRLVAYEP
Ga0074055_1182622523300006573SoilVDLIHPHSKRDVVDALRTASAAATRVLTVGGRQHIDKGNPSEVDAELWTTLLDGRVA
Ga0074050_1209504823300006577SoilVDLIHPTSRADIVEAVRDANATARRLLVVGGRWHVDKGNPGEVDAELWTTQLDRLVAYE
Ga0075430_10089008413300006846Populus RhizosphereVDLIHPTSRAGVVEAIRDANATARRLLVVGGRRHVDKGNPAEIDAELWTTQLDRLVAYEPAE
Ga0075434_10166522213300006871Populus RhizosphereVDLIHPHSKRDVVDAIRTASAAETRVLTVGGRQHIDKGNPSEVDAELWT
Ga0075419_1078525413300006969Populus RhizosphereMDLIHPASKADVVDAVRDANASGRSLLVVGGRRHLDKGNPSEVDAELWTTQFD
Ga0105098_1017360613300009081Freshwater SedimentMDKAAVAEALRQATADRKRLLVVGGRTHVDKGEPGAVDAELWTTQLDALVAYEPAEM
Ga0105249_1150284813300009553Switchgrass RhizosphereVDLIHPHSKRDVVDVLRTASDAETRVLTVGGRQHIDKGNPSEVDAELWTT
Ga0105088_109349323300009810Groundwater SandMDKLEVVEALRDATAGRRRTLVVGGRTHIDKGQSCEVDAELWTTQLDALVAYEPAEMIA
Ga0105076_100281513300009816Groundwater SandVDLIHPSSKADVVEAVRDANATARRLLVVGGRRHLDKGNPSQVDAELWTTQLD
Ga0105058_101248713300009837Groundwater SandVDLIHPTSRAGVVEAIRDANATARRLLVVGGRRHVDKGNPAEVDAELWTTQLDRLV
Ga0105074_100784923300010029Groundwater SandVDLIHPTSRADVVEAVRDANATARRLLVIGGRWHVDKGNPGEVDAELWTTQLD
Ga0105074_104619113300010029Groundwater SandMDKVGVAEALRQATADRKRLLVVGGRTHADKGEPCAVDAELWTTQLDRLVAYEPA
Ga0134070_1012987913300010301Grasslands SoilVDLIHPHSKRDVVDALRAASAAETRVLIVGGRRHIDKGNP
Ga0134086_1043020823300010323Grasslands SoilVDLIHPHSARDVQDALRTASANGVRVLLVGARQQMDRGNPS
Ga0134111_1003620723300010329Grasslands SoilMDKLEVAEALRQATADRKRLLVMGGRTHVDKGEPCEVDAELWTTQLDGLVAY
Ga0134063_1069198713300010335Grasslands SoilVDLIHPHTKGDVAGALRQASAAGTRVLIVGGRQHADKCEPVEVDAELWTTLLDDR
Ga0137344_107003813300012159SoilVDLIHPSSKADVAEAVREANATARRLLVVGGRRHLDKGNPSEIDAEL
Ga0137380_1175065213300012206Vadose Zone SoilVDLIHPRTKIDVADALRDASAHGTMVLIVGGRSHMDRGNPVEVDAELL
Ga0137381_1117137413300012207Vadose Zone SoilVDLIHPHSKRDVVDALRAASAAETRVLIVGGRRHIDKGNPSQVD
Ga0137375_1144306423300012360Vadose Zone SoilMDKLEVVETLRRATADRKRLLVVGGRTHVDKGEPCAVDAELWTTQLDALVAY
Ga0164303_1065120423300012957SoilVDLIHPHSTRDVVDALRTASAAETRVLTVGGRQHIDKGNPSEVDAELWTTLL
Ga0164302_1045043923300012961SoilVDLIHPHSKRDVVDALRTASAAETRVLIVGGRQHIDKGNPSEVDAELWTTLLDGRVAYD
Ga0134075_1039254423300014154Grasslands SoilMDKLEVAEALRQATADRKRLLVMGGRTHVDKGEPCEVDAELWTTQLDGLVAYEPAEMIAVVE*
Ga0075354_113166113300014308Natural And Restored WetlandsMSSVPAAIELIHPSSAADIVDAVRAANASGQRLLVVGGRRHIDKSNPAVVDAELWTTQLDRPVAY
Ga0132256_10369372513300015372Arabidopsis RhizosphereVDLIHPTSKADVLDAIRDANAVLHRLLVVGGRRHLDKGNPAEVDAELWTTQLDRLVAYEPAEMIAVVEA
Ga0132257_10159972323300015373Arabidopsis RhizosphereVDLIHPTSKADVLDAIRDANAVLHRLLVVGGRRHLDKGNPAEVDAELWTTQLDRLVSY*
Ga0187777_1134535323300017974Tropical PeatlandVDLIHPHSKHDVADALREASATGSRVMIVGGRQHIDKGNPSEVD
Ga0184634_1032185723300018031Groundwater SedimentVDLIHPSSRADVVEAVRDANAIARRLLVVGGRWHVDKGNPGEVDAELWTTQLDRLVAYE
Ga0184623_1045618813300018056Groundwater SedimentVDLIHPSSKADIVEALRDANATARRLLVVGGRRHLDKGNPSEVDAE
Ga0184635_1000565813300018072Groundwater SedimentVDLIHPSSRADVVEAVRDANATARRLLVVGGRRHADKGNPAEVDAELWTTQLDRLV
Ga0184633_1038890023300018077Groundwater SedimentVDLIHPSSKADIVEAIREANATARRLLVVGGRRHLDKGNPSEIDAELWTTQLDRLVAY
Ga0184612_1057021623300018078Groundwater SedimentVDLIHPSSKADVVEAVRDANATARRLLVVGGRRHLDKGNPSEVDAELWTTQLDRLVAY
Ga0184628_1070574613300018083Groundwater SedimentVDLIHPSSKADVVDAIRDANATLHRLLVVGGRRHLDKGNPAEVEAELWTTQLDRL
Ga0190269_1053934323300018465SoilVDLIHPSSRADVVEAVRDANVTARRLLVVGGRWHVDKGNPGEVDAELWTTQLDRLVAYEP
Ga0190268_1202755113300018466SoilMSPELLHPTSAGDVSEMLAACSAEGRRVLVVGGRRHLDKGEPAEVDAELWT
Ga0193700_106763823300019873SoilVDLIHPHSKRDVVDALRIASAAETRVLTVGGRQHIDKGN
Ga0193735_106469513300020006SoilMDLIHPHSKRDVVDALRTASAAETRVLTVGGRQHIDKGNPSEVDAELWTTLLDARIAY
Ga0210378_1035954013300021073Groundwater SedimentVDLIHPSSRADVVEAVRDANATARRLLVVGGRWHVDKGNPCEVDAELWTTQLDRLVAYEP
Ga0210381_1002844723300021078Groundwater SedimentVDLIHPHSKRDVVDALRTASAAETRVLTVGGRQHIDKGNPSEVDA
Ga0193736_103706113300021412SoilVDLIHPSSKADVVEAVRDANATARRLLVVGGRRHLDKGNPSGIDAELW
Ga0210318_101785023300022389EstuarineMDLIHPNSRDEVVRAIRDANSTNKRVLVIGGRRHIDK
Ga0222622_1105169613300022756Groundwater SedimentVDLIHPHSKRDVVDALRTASAAETRVLTVGGRQHIDKGNPSEVDAELWTTLLDDRVAYDP
Ga0209324_1021325823300025174SoilMELMHPHTKVDVVEAVREANASALRVLVVGGRRHVDKGNPSEVDAELWTTQLDRL
Ga0209342_1017467033300025326SoilVDLIHPHTAGEVADALRTASAGATRLLVVGGRQHIDKGNPTEVDGELWTTLLDRTIAYDP
Ga0207684_1150906713300025910Corn, Switchgrass And Miscanthus RhizosphereVDLIHPTSKADVVDAIRQANATKHRMLVVGGRRHLDKGNPAAVDAELWTTQ
Ga0207687_1171557313300025927Miscanthus RhizosphereVDLIHPHSKRDVIDALRTASDAETRVLTVGGRQHI
Ga0207712_1072942113300025961Switchgrass RhizosphereVDLIHPTSGAGVVEAIRDANATVRRLIVVGGRRHVDKGNPAEVDAELWTTQLDRLVAYEP
Ga0207698_1223176613300026142Corn RhizosphereVDLIHPTSRAGVVEAIRDANATARRLLVVGGRRHADKGNPAEVDAELWTT
Ga0209470_102594513300026324SoilVDLIHPHSKRDVVDALRAASAAETRVLIVGGRRHIDKGNPSHVDAEL
Ga0209266_124538123300026327SoilVDLIHPHTKRDAAEALRDASAAGTRALVVGGRRHADKGEPTEVDAELWTTLLDDRVAYDPAEMLCVVA
Ga0209057_108364523300026342SoilVDLIHPHSKRDVVDALRAASAAETRVLIVGGRRHIDKGNPSHVDAELWTTVLDDRVAYDPAEMLC
Ga0256867_1022591313300026535SoilMDLIHPQSKAEVVDAVRRANADRRRLLVVGGRRHLDKGNPAEFDAELWTTQ
Ga0209846_101105413300027277Groundwater SandMDLIHPMEKLEVVEALRDATAGRRRTLVVGGRTHIDKGQSCEVDAELWTTQLDALVAYEPAEMIA
(restricted) Ga0233416_1033453123300027799SedimentVDLIHPSSKADLLDAIRSANAERRRLLVVGGRRHIDKGNPSELDAELWTTQLDRPVAC
Ga0209486_1087754323300027886Agricultural SoilMDLIHPRSKAEVVDAVRRANGGGRRLLVVGGRRHLDKGNPAEIDAELWTTQLDSLVAYE
Ga0268264_1011172843300028381Switchgrass RhizosphereVDLIHPTSRAGVVEAIRDANATARRLLVVGGRRHADKGNPAEVDAELWTTQLDRL
Ga0210336_102542013300028528EstuarineMDLIHPNSRDEVVRAIRDANSTNKRVLVIGGRRHIDKGNETEVDAEM
Ga0247818_1075882323300028589SoilVDLIHPSSKADVVDAIRQANAILHRLLVVGGRRHLDKGNPSEVDAELWTTQL
Ga0307276_1004163923300028705SoilVDLIHPHSKRDVVDALRIASAAETRVLTVGGRQHIDKGNPSEVDAELWTTLLD
Ga0307301_1026024723300028719SoilVDLIHPTSRADVVEAVRDANATARRLLVVGGRRHVDKGNPAEVDAELWMTQLDR
Ga0307320_1009683813300028771SoilVDLIHPMDKVGVAEALRQATADRKRLLVVGGRTHADKGEPCAVDAELWTTQLDRLVAYEP
Ga0307290_1007692723300028791SoilVDLIHPSSRADVVEAVRDANATARRLLVVGGRWHVDKGNPCEVDAELWTTQLDRLVAYEPAE
Ga0307305_1026604323300028807SoilVDLIHPHSKRDVVDALRTASAAGTRVLTVGGRQHIDKGNPSEV
Ga0307292_1013039323300028811SoilVDLIHPTSKADVVEAVRDANAAARRLLVVGGRRHLDKGNPAEVDAELWST
Ga0307296_1023064323300028819SoilVDLIHPTSRADVVEAIRDANATARRLLVVGGRRHADKGNPAEVDAELWTTQLDRLVAYE
Ga0307310_1058181923300028824SoilVDLIHPHTKADVAEALRRASAERTRLLVVGGRRHIDKGNPTEIDAELWTTQLDRL
Ga0307278_1011609523300028878SoilVDLIHPHSKRDVVDALRAASAAETRVLVVGGRQHIDRGNPSEVDAELWTTLLDDRVAYDP
Ga0307277_1041741913300028881SoilVDLIHPHSKRDVVDALRTASAAGMRVLTVGGRQHID
Ga0247826_1170041123300030336SoilVDLIHPTSKSDVVEAIRDANTTARRLLVVGGRRHIDKGNPAEVDAERPERYGDELV
Ga0268386_1029649413300030619SoilMDLIHPQTKADVLEVVRDANERGRRILVMGGRRHVDKGNPSDVDAELW
Ga0310887_1004974513300031547SoilVDLIHPSSKADVVDTIRDANATLHRLLVVGGRRHLDKGNPSEVDAELWTTQLDRLVAYEP
Ga0214473_1056930323300031949SoilVDLIHPHTAGEVAEALRTASAGGTRLLVVGGRQHIDKGNPTEVDGELWTTLLD
Ga0307409_10030139013300031995RhizosphereVDLIHPASRTDVVEGVRDANATARRLLVVGGRRHVDKGNPAEVDAELWTTQLD
Ga0315278_1198260823300031997SedimentMDLIHPHTPAEVADVLRAASAKGVRLLVVGGRQHIDKGNPSEVDAELWTTGLDRPVAYDP
Ga0310890_1020126313300032075SoilVDLIHPTSKADVLDAILDANAVLHRLLVVGGRRHLDKGNPAEVDAELWTTQLDRLVAY
Ga0315277_1128853913300032118SedimentVDLIHPHGKADVVEALVEATELRRRMLVVGGRRHMDKGNPCEVDT
Ga0315283_1068341723300032164SedimentVDLIHPHSIRGVQEALRDASAAGTRVLLVGGRRHIDKGNPSEVDA
Ga0310889_1038570513300032179SoilVDLIHPSSKADVVDAIRDANATLHRLLVVGGRRHLDKGNPVEVDAELWTTQLDRLVA
Ga0214471_1039730323300033417SoilVDLIHPASRADVVEAVRDANATARRLLVVGGRRHVDRGNPDEVDAELWTTQLDRLVAYEPAEMI
Ga0326723_0264861_1_1563300034090Peat SoilVDLIHPHDAHAVQEALREASAAGTRVLPVGGRQHIDKGNPCEVNAELWTTLL
Ga0364942_0078216_928_10653300034165SedimentVDLIHPSSKADLVDAVRAANAEARRLIVVGGRRHLDKGNPCEIDAE
Ga0364923_0135598_1_1473300034690SedimentVDLIHPSSKADVAEAVREANATARRLLVVGGRRHLDKGNPSEVDAELWT

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.