NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105459

Metagenome / Metatranscriptome Family F105459

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105459
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 104 residues
Representative Sequence MRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRK
Number of Associated Samples 87
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 62.00 %
% of genes near scaffold ends (potentially truncated) 44.00 %
% of genes from short scaffolds (< 2000 bps) 78.00 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (89.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(12.000 % of family members)
Environment Ontology (ENVO) Unclassified
(36.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(59.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 2.26%    β-sheet: 7.52%    Coil/Unstructured: 90.23%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00158Sigma54_activat 6.00
PF05977MFS_3 5.00
PF12587DUF3761 3.00
PF13620CarboxypepD_reg 3.00
PF03928HbpS-like 2.00
PF01799Fer2_2 2.00
PF02738MoCoBD_1 1.00
PF00753Lactamase_B 1.00
PF13365Trypsin_2 1.00
PF01740STAS 1.00
PF00111Fer2 1.00
PF028262-Hacid_dh_C 1.00
PF02119FlgI 1.00
PF04321RmlD_sub_bind 1.00
PF07152YaeQ 1.00
PF13531SBP_bac_11 1.00
PF13545HTH_Crp_2 1.00
PF02574S-methyl_trans 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 5.00
COG0451Nucleoside-diphosphate-sugar epimeraseCell wall/membrane/envelope biogenesis [M] 2.00
COG0702Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domainsGeneral function prediction only [R] 2.00
COG1086NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsCCell wall/membrane/envelope biogenesis [M] 2.00
COG0646Methionine synthase I (cobalamin-dependent), methyltransferase domainAmino acid transport and metabolism [E] 1.00
COG1087UDP-glucose 4-epimeraseCell wall/membrane/envelope biogenesis [M] 1.00
COG1088dTDP-D-glucose 4,6-dehydrataseCell wall/membrane/envelope biogenesis [M] 1.00
COG1089GDP-D-mannose dehydrataseCell wall/membrane/envelope biogenesis [M] 1.00
COG1090NAD dependent epimerase/dehydratase family enzymeGeneral function prediction only [R] 1.00
COG1091dTDP-4-dehydrorhamnose reductaseCell wall/membrane/envelope biogenesis [M] 1.00
COG1706Flagellar basal body P-ring protein FlgICell motility [N] 1.00
COG2040Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)Amino acid transport and metabolism [E] 1.00
COG4681Uncharacterized conserved protein YaeQ, suppresses RfaH defectFunction unknown [S] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.00 %
UnclassifiedrootN/A11.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0431057All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101692338All Organisms → cellular organisms → Bacteria2295Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101694217All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium856Open in IMG/M
3300000955|JGI1027J12803_103622241All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300003321|soilH1_10264957All Organisms → cellular organisms → Bacteria → Proteobacteria1329Open in IMG/M
3300004114|Ga0062593_100005381All Organisms → cellular organisms → Bacteria → Acidobacteria5297Open in IMG/M
3300004156|Ga0062589_100003434All Organisms → cellular organisms → Bacteria5302Open in IMG/M
3300004156|Ga0062589_100840960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium837Open in IMG/M
3300004479|Ga0062595_101146337Not Available684Open in IMG/M
3300004803|Ga0058862_12233147All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium897Open in IMG/M
3300005328|Ga0070676_10105087All Organisms → cellular organisms → Bacteria → Proteobacteria1751Open in IMG/M
3300005328|Ga0070676_10421416All Organisms → cellular organisms → Bacteria → Proteobacteria933Open in IMG/M
3300005332|Ga0066388_102513489All Organisms → cellular organisms → Bacteria → Proteobacteria936Open in IMG/M
3300005334|Ga0068869_100497914All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1017Open in IMG/M
3300005339|Ga0070660_100556771All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300005364|Ga0070673_100259027All Organisms → cellular organisms → Bacteria1519Open in IMG/M
3300005364|Ga0070673_100613811Not Available993Open in IMG/M
3300005444|Ga0070694_101015905All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium689Open in IMG/M
3300005459|Ga0068867_101052102All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium741Open in IMG/M
3300005466|Ga0070685_11235895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300005526|Ga0073909_10110644All Organisms → cellular organisms → Bacteria → Proteobacteria1099Open in IMG/M
3300005544|Ga0070686_100892342All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium723Open in IMG/M
3300005545|Ga0070695_101520413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. B18557Open in IMG/M
3300005549|Ga0070704_100513940All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300005713|Ga0066905_100742172All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium846Open in IMG/M
3300005764|Ga0066903_108839884All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300005842|Ga0068858_101296439All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300005842|Ga0068858_101968092All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300006031|Ga0066651_10828373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. B18503Open in IMG/M
3300006049|Ga0075417_10048584All Organisms → cellular organisms → Bacteria1825Open in IMG/M
3300006196|Ga0075422_10337658All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium654Open in IMG/M
3300006844|Ga0075428_100003273All Organisms → cellular organisms → Bacteria17722Open in IMG/M
3300006852|Ga0075433_10036341All Organisms → cellular organisms → Bacteria → Proteobacteria4243Open in IMG/M
3300006854|Ga0075425_100357731All Organisms → cellular organisms → Bacteria → Proteobacteria1681Open in IMG/M
3300006876|Ga0079217_10513208All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300006880|Ga0075429_100133963All Organisms → cellular organisms → Bacteria2168Open in IMG/M
3300006904|Ga0075424_100041675All Organisms → cellular organisms → Bacteria4781Open in IMG/M
3300006904|Ga0075424_100157665All Organisms → cellular organisms → Bacteria2405Open in IMG/M
3300009147|Ga0114129_11494526All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300009156|Ga0111538_12248673All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium685Open in IMG/M
3300009162|Ga0075423_10027389All Organisms → cellular organisms → Bacteria → Proteobacteria5730Open in IMG/M
3300010043|Ga0126380_10057789All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2133Open in IMG/M
3300010359|Ga0126376_10273279All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1452Open in IMG/M
3300010362|Ga0126377_10032155All Organisms → cellular organisms → Bacteria4445Open in IMG/M
3300010403|Ga0134123_10836714All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium918Open in IMG/M
3300012200|Ga0137382_10524289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium843Open in IMG/M
3300012200|Ga0137382_10537733All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium832Open in IMG/M
3300012208|Ga0137376_10111660All Organisms → cellular organisms → Bacteria2326Open in IMG/M
3300012212|Ga0150985_111087670All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio2210Open in IMG/M
3300012912|Ga0157306_10158316All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium723Open in IMG/M
3300012948|Ga0126375_10591524All Organisms → cellular organisms → Bacteria → Acidobacteria846Open in IMG/M
3300012951|Ga0164300_10648643Not Available631Open in IMG/M
3300012955|Ga0164298_10214072All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300012961|Ga0164302_10082115All Organisms → cellular organisms → Bacteria1721Open in IMG/M
3300013296|Ga0157374_11977574Not Available609Open in IMG/M
3300013308|Ga0157375_11974569Not Available693Open in IMG/M
3300014969|Ga0157376_12089846Not Available605Open in IMG/M
3300015371|Ga0132258_12419889All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1315Open in IMG/M
3300015372|Ga0132256_100511420All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1312Open in IMG/M
3300015373|Ga0132257_104517838All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300015374|Ga0132255_100003038All Organisms → cellular organisms → Bacteria18191Open in IMG/M
3300018083|Ga0184628_10013160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4013Open in IMG/M
3300019361|Ga0173482_10396718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300025315|Ga0207697_10224063All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300025903|Ga0207680_10640422All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300025908|Ga0207643_10008233All Organisms → cellular organisms → Bacteria5597Open in IMG/M
3300025912|Ga0207707_11385551All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300025917|Ga0207660_11648836All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300025926|Ga0207659_10016499All Organisms → cellular organisms → Bacteria4807Open in IMG/M
3300025931|Ga0207644_10109336All Organisms → cellular organisms → Bacteria2088Open in IMG/M
3300025933|Ga0207706_10193418All Organisms → cellular organisms → Bacteria1785Open in IMG/M
3300025938|Ga0207704_10643691All Organisms → cellular organisms → Bacteria → Acidobacteria872Open in IMG/M
3300025942|Ga0207689_10784251All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium804Open in IMG/M
3300025960|Ga0207651_10062831All Organisms → cellular organisms → Bacteria2590Open in IMG/M
3300025960|Ga0207651_11362598Not Available638Open in IMG/M
3300026035|Ga0207703_10284639All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1502Open in IMG/M
3300026075|Ga0207708_10843652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium791Open in IMG/M
3300026089|Ga0207648_11711837All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300026095|Ga0207676_10031746All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3974Open in IMG/M
3300026095|Ga0207676_10466933All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300026118|Ga0207675_101928195All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300027876|Ga0209974_10142629All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300027880|Ga0209481_10163615All Organisms → cellular organisms → Bacteria → Acidobacteria1102Open in IMG/M
3300028380|Ga0268265_12104120All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300028380|Ga0268265_12273006All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
(restricted) 3300031197|Ga0255310_10053065All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1060Open in IMG/M
3300031547|Ga0310887_10661801Not Available645Open in IMG/M
3300031720|Ga0307469_10250250All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1425Open in IMG/M
3300031720|Ga0307469_11182860Not Available722Open in IMG/M
3300031740|Ga0307468_100147402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1504Open in IMG/M
3300031740|Ga0307468_101780794Not Available582Open in IMG/M
3300031820|Ga0307473_11467387All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300031854|Ga0310904_10683690All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300031940|Ga0310901_10427346Not Available582Open in IMG/M
3300032180|Ga0307471_100183316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales2068Open in IMG/M
3300032180|Ga0307471_101459907All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium843Open in IMG/M
3300032205|Ga0307472_101846869All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300033433|Ga0326726_10078213All Organisms → cellular organisms → Bacteria2927Open in IMG/M
3300034176|Ga0364931_0136941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium786Open in IMG/M
3300034417|Ga0364941_188299All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil8.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere8.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere6.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.00%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.00%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.00%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated1.00%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.00%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.00%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M
3300034417Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_043105713300000033SoilMRRIISSLVVAVFCVTGSAAXAQLGALKDGAKKAGSVTKEAGKATVEATEKGTKKVVGETKDAVQTTYVCADGKTDRATLKANACKDHGGVKAEPRPKPRY*
INPhiseqgaiiFebDRAFT_10169233833300000364SoilMRRLISSLVVAIFCVTGSAAFAQFGAVKDGAKKAGSVTKEAGKTTVDTTKDAAKATGKGTKKVAGETKDAVQTTYVCVDGTTDQATLKANACKDHGGVKAGAKAKR*
INPhiseqgaiiFebDRAFT_10169421723300000364SoilHDLENIAGGISIMRRFISSLVVATFCLTGSAAFAQFGAVKEGAKKAGSATKEAGKATVDTTKDVAKATEKGTKKVAGETKDAVQTNYVCVDGTTDQATLKANACKNHGGVKANAKAKR*
JGI1027J12803_10362224133300000955SoilMRRLISSLVVAIFCVTGSAAFAQFGAVKDGAKKAGSVTKEAGKTTVDTTKDAAKATGKGTKKVAGETKDAVQTTYVCVDGTTDQATLKAN
soilH1_1026495733300003321Sugarcane Root And Bulk SoilMRRLISSLIVASFCVTGSAAFAQFGVVKDGAKKAGSATKEAGKATVETTKDAAKATEKGTKKVAGETKDAVQTNYVCADGTTDQATLRANACRDHGGVRPEAKRKH*
Ga0062593_10000538133300004114SoilMTGSAAFAQLGAVKEGAKKAGSATKEAGKATAETTKDAAKATEKGTKKVAGETKDAVQTTYVCTDGTTDQATLKANACRDHGGVKPEAKRKH*
Ga0062589_10000343443300004156SoilMRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ*
Ga0062589_10084096033300004156SoilMRRFISSLTVALFCMTGSAAFAQLGAVKEGAKKAGSATKEAGKATAETTKDAAKATEKGTKKVAGETKDAVQTTYVCTDGTTDQATLKANACRDHGGVKPEAKRKH*
Ga0062595_10114633723300004479SoilMRRIISTLVVASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH*
Ga0058862_1223314713300004803Host-AssociatedMRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRK*
Ga0070676_1010508733300005328Miscanthus RhizosphereMRRFISSLIVASFCVTGSAAFAQFGAVTDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKNAVQTTYVCADGTRDQATLKTNACRDHGG
Ga0070676_1042141623300005328Miscanthus RhizosphereMRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGG
Ga0066388_10251348913300005332Tropical Forest SoilMRRLISSLIVASFCVTGSAAFAQFGAVKEGAQKVGSATKEAGKATVETTKDAAKATEKGTKKVAGETKEAVQSTYACKDGTTDQATLKTNACRDHGGVKPEAKRKK*
Ga0068869_10049791433300005334Miscanthus RhizosphereRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ*
Ga0070660_10055677113300005339Corn RhizosphereMRRFISTLIVASFCMTGSAAFAQFGAVKDGAEKVGSATKEAGKATAEATKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACTHHGGVKPAPGQKR*
Ga0070673_10025902743300005364Switchgrass RhizosphereMRRLIPTLVIASFCITGSVASAQFDAVADGAKKAGTAAKDVGKATVETTKDAAKATEKGAKKVAGKTKNAVQTKYVCADGTTDQATVKDNACRDHGGVKTKTKQ*
Ga0070673_10061381113300005364Switchgrass RhizosphereMRRIISTLVVASFCITGSIASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH*
Ga0070694_10101590513300005444Corn, Switchgrass And Miscanthus RhizosphereMRQLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ*
Ga0068867_10105210223300005459Miscanthus RhizosphereIMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR*
Ga0070685_1123589523300005466Switchgrass RhizosphereMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR*
Ga0073909_1011064423300005526Surface SoilMRRLISSLVIATFCLTGSAAFAQFGAVKEGAKKAGSATKEAGKATVDTTKDVAKATEKGTKKVAGETKDAVQTNYVCVDGTTDQATLKANACKDHGGVKANAKAKR*
Ga0070686_10089234213300005544Switchgrass RhizospherePLENFIMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR*
Ga0070695_10152041313300005545Corn, Switchgrass And Miscanthus RhizosphereEAQVFTRERVLHGTSLEAITGGELPMRRIISTLVVASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH*
Ga0070704_10051394023300005549Corn, Switchgrass And Miscanthus RhizosphereMRRLISSLVVAVFCATSSPAFAQIGALKDGAKKAGSVTKEAGKATTDVAKKGAKATEKGTKKVAGETKDAVQTTYPCADGTTDAATLKDNACRNHGGVKPKAKR*
Ga0066905_10074217223300005713Tropical Forest SoilMRRLISSLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKKAGKATAKGTQKVAGETKEAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKRKH*
Ga0066903_10883988413300005764Tropical Forest SoilKHSRSGDSIMRRLISSLIVASFCVTGSAAFAQFGAVKEGAQKVGSATKEAGKATVETTKDAAKATEKGTKKVAGETKEAVQSTYACKDGTTDQATLKTNACRDHGGVKPEAKRKK*
Ga0068858_10129643923300005842Switchgrass RhizosphereMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKLAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR*
Ga0068858_10196809213300005842Switchgrass RhizosphereQENSIMRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ*
Ga0066651_1082837313300006031SoilMRRLIPTLVIASLCITGTVASAQFDAVADGVKKAGSVTKDAGKATAEKTKDAAKATEKGTKKVADKTKDAVQTKYVCTDGTTDEATLKDNACRDHGGVKAKA
Ga0075417_1004858413300006049Populus RhizosphereVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKKKH*
Ga0075422_1033765823300006196Populus RhizosphereMRRLISSLIVASFCVTGTATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ*
Ga0075428_10000327383300006844Populus RhizosphereMRRLISSLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKKKH*
Ga0075433_1003634123300006852Populus RhizosphereMRRLISSLVVAIFCVTGSAAFAQFGAVKDGAKKAGSVTKEAGKTTVDTTKDAAKATGKGTKKVAGKTKDAVQTTYVCVDGTTDQATLKANACKDRGGVKAGAKARR*
Ga0075425_10035773133300006854Populus RhizosphereSAAFAQFGAVKDGAKKAGSVTKEAGKTTVDTTKDAAKATGKGTKKVAGKTKDAVQTTYVCVDGTTDQATLKANACKDRGGVKASAKARR*
Ga0079217_1051320813300006876Agricultural SoilMRRIISSLVVAVFCVTGSAAFAQLGALKDGAKKAGSVTKEAGKATVDATEKGTKKVVGETKDAVQTTYVCADGKTDRATLKANACKDHGGVKAEPRPKPRY*
Ga0075429_10013396343300006880Populus RhizosphereSIMRRLISSLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKKKH*
Ga0075424_10004167563300006904Populus RhizosphereMRRIISTLVVASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAKGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH*
Ga0075424_10015766543300006904Populus RhizosphereMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKKKH*
Ga0114129_1149452613300009147Populus RhizosphereMRQLISSLIVASFCVTGSAAFAQLGAVKEGAKKAGSATKEAGKATVETTKDAAKATEKGTKKVAGKTKDAVQTTYVCADGTTDQATLKAN
Ga0111538_1224867313300009156Populus RhizosphereFCVTGSAAFAQLGAVKEGAKKAGSATKEAGKATVETTKDAAKATEKGTKKVAGKTKDAVQTTYVCADGKTDQATLKANACRDHGGVRPEAKRKQ*
Ga0075423_1002738913300009162Populus RhizosphereMSRIARCWLPCMLEHELEQPRYGGISIMRRLISSLVVAIFCVTGSAAFAQFGAVKDGAKKAGSVTKEAGKTTVDTTKDAAKATGKGTKKVAGKTKDAVQTTYVCVDGTTDQATLKANACKDRGGVKASAKARR*
Ga0126380_1005778923300010043Tropical Forest SoilMRRLISSLIVASFCVTGSAVFAQLDAVTDAAKKAGSATKEVGKATVETTKKAGKATAKGTQKVAGETKEAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKRKH*
Ga0126376_1027327923300010359Tropical Forest SoilMRRFISSLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR*
Ga0126377_1003215553300010362Tropical Forest SoilMRRFISALIVASFCVTGSAAFAQFGAVKDGAQKVGSATKEAGKATVETTKDAAKATEKGTKKVAGETKNAVQTTYRCADGSTDNATLKTNACRDHGGVKAEAKQKR*
Ga0134123_1083671433300010403Terrestrial SoilRCTGVGVPIRLEHHLKHHPLENFIMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKHAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR*
Ga0137382_1052428913300012200Vadose Zone SoilMGVSIMRRFISSLVIATFCLTGSAAFAQFGAVKDGAKKAGSATKEVGKATVDTTKDAAKATEKGTKKVAGETKDAVQTNYVCVDGTADQATLKANACKDHGGVKTNAKAKH*
Ga0137382_1053773313300012200Vadose Zone SoilALKHPAGTSLERDGRGDSIMRRIISTVVIAVFCISGSATYAQFGAVKDGAKKAGSVTKDAGKATAETTKDAAKATGKGTKKVATEANDVVQTTYACADGTTDKATVKERACREHGGVTTERTAKPKH*
Ga0137376_1011166033300012208Vadose Zone SoilMRRIISTVVIAVFCISGSATYAQFGAVKDGAKKAGSVTKDAGKATAETTKDAAKATGKGTKKVATEANDVVQTTYACADGTTDKATVKERACREHGGVTTERTAKPKH*
Ga0150985_11108767033300012212Avena Fatua RhizosphereVSMMKRLISSLIIAAFCLTGSAAFAQFGVVKDGAKKAGSVTKDAGKVTVDTTKDVAKATEKGTKKVAEESKDAVQTKYVCVDGTTDEATLKTNACKDHGGVKANVKTKH*
Ga0157306_1015831623300012912SoilMRRLISSLIVASFCVTGSATLAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ*
Ga0126375_1059152423300012948Tropical Forest SoilMRRLISSLIVASFCVTGSAALAQFDAVTDAAKKAGSVTKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDEATLKTNACKEHGGVRPETKHKH*
Ga0164300_1064864323300012951SoilVLRGTSLEAITGGELPMRRIISTLVVASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCSDGTTDQATLKDNACRDHGGVKAKSKH
Ga0164298_1021407223300012955SoilMRRIIPTLVIASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKANACRDHGGVKAKSKH*
Ga0164302_1008211533300012961SoilVLRGTSLEAITGGELPMRRIISTLVVASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH
Ga0157374_1197757423300013296Miscanthus RhizosphereNRLNSSGLRRREAQVFTRERVLRGTSLEAITGGELPMRRIISTLVVASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH*
Ga0157375_1197456923300013308Miscanthus RhizosphereSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH*
Ga0157376_1208984613300014969Miscanthus RhizosphereMRRIISTLVVASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGAKKVAGKTKNAVQTKYVCADGTTDQATVKDNACRDHGGVKTKTKQ*
Ga0132258_1241988933300015371Arabidopsis RhizosphereMQIRLEHHLKHLYRENSIMRRFISSLIVASFCVTGSAAFAQFGAVTDGVKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTTYVCADGTKDQATLKTNACRDHGGVRPEAKRK*
Ga0132256_10051142033300015372Arabidopsis RhizosphereMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAGAKQKR*
Ga0132257_10451783813300015373Arabidopsis RhizosphereTYAQFGAVKDGAKKAGSVTKDVGKATAETTKDAAKATGKGTKKVATEANDVVQTTYACADGTKDKATVKEHACREHGGVTTERTAKPKH*
Ga0132255_100003038163300015374Arabidopsis RhizosphereMRRLISSLIVASVCVTGNAAFAQLGAVKEGAKKAGSATKEVGKATAETTKDAAKATEKGTKKVAGETKDAVQTTYVCADGTTDQATLKTNACRDHGGVRPQAKRKH*
Ga0184628_1001316053300018083Groundwater SedimentMRRLISSLVIATFCLTGSAAFAQFGAVKEGAKKAGSATKEAGKATVDTTKDVAKATEKGTKKVAGETKDAVQTNYVCVDGTTDQATLKTNACRNHGGVKANAKAKR
Ga0173482_1039671823300019361SoilSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ
Ga0207697_1022406313300025315Corn, Switchgrass And Miscanthus RhizosphereMRRIISTLVVASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVK
Ga0207680_1064042223300025903Switchgrass RhizosphereMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKT
Ga0207643_1000823333300025908Miscanthus RhizosphereMRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ
Ga0207707_1138555113300025912Corn RhizosphereTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKHAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR
Ga0207660_1164883613300025917Corn RhizosphereMRRFISTLIVASFCMTGSAAFAQFGAVKDGAEKVGSATKEAGKATAEATKDAAKATEKGTKTVAGETKNAVQTTYRCADGTMDQATLKT
Ga0207659_1001649913300025926Miscanthus RhizosphereASFCMTGSAEFAQFGAVKDGAEKVGSATKEAGKATAEATKDAAKATEKGTKKVAGETKNAVQTTYRCADGTMDQATLKTNACRDHGGVKPRAKSKH
Ga0207644_1010933623300025931Switchgrass RhizosphereMRRIISTLVVASFCITGSVASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH
Ga0207706_1019341813300025933Corn RhizosphereMRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDH
Ga0207704_1064369123300025938Miscanthus RhizosphereMRRIISTLVVASFCITGSIASAQFGAVTDGAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH
Ga0207689_1078425133300025942Miscanthus RhizosphereRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ
Ga0207651_1006283143300025960Switchgrass RhizosphereMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR
Ga0207651_1136259823300025960Switchgrass RhizosphereMRRLIPTLVIASFCITGSVASAQFDAVADGAKKAGTAAKDVGKATVETTKDAAKATEKGTKKVAEGTKNAVQTKYVCADGTTDQATLKDNACRDHGGVKAKSKH
Ga0207703_1028463913300026035Switchgrass RhizosphereMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKLAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR
Ga0207708_1084365233300026075Corn, Switchgrass And Miscanthus RhizosphereVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPEAKRKQ
Ga0207648_1171183723300026089Miscanthus RhizosphereIMRHLISTLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATLKTNACRDHGGVKAEAKQKR
Ga0207676_1003174643300026095Switchgrass RhizosphereMRRLIPTLVIASFCITGSVASAQFDAVADGAKKAGTAAKDVGKATVETTKDAAKATEKGAKKVAGKTKNAVQTKYVCADGTTDQATVKDNACRDHGGVKTKTKQ
Ga0207676_1046693333300026095Switchgrass RhizosphereMRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRDHGGVRPGEAKR
Ga0207675_10192819513300026118Switchgrass RhizosphereMRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQATLKTNACRD
Ga0209974_1014262923300027876Arabidopsis Thaliana RhizosphereMRRFISSLTVALFCMTGSAAFAQLGAVKEGAKKAGSATKEAGKATAETTKDAAKATEKGTKKVAGETKDAVQTTYVCTDGTTDQATLKANACRDHG
Ga0209481_1016361513300027880Populus RhizosphereMRRLISSLIVASFCVTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKKKH
Ga0268265_1210412013300028380Switchgrass RhizosphereMRRLISSLIVASFCVTGSATFAQLGAVKDGAKKAGSATKEAGKATVETTKDAAKATGKGTKKVAEGTKDAVQTNYVCADGTTDQAT
Ga0268265_1227300613300028380Switchgrass RhizosphereRFISSLTVALFCMTGSAAFAQLGAVKEGAKKAGSATKEAGKATAETTKDAAKATEKGTKKVAGETKDAVQTTYVCTDGTTDQATLKANACRDHGGVKPEAKRKH
(restricted) Ga0255310_1005306513300031197Sandy SoilMRRLISSLVIATLCLTGSAAFAQFGAVKEGAKKAGSATKEAGKATVDTTKDVAKATEKGTKKVAGETKDAVQTNYVCVDGTTDQATLKTNACKDHGGVKANAKAKR
Ga0310887_1066180113300031547SoilTGSAAFAQLDAVTDAAKKAGSATKEVGKATVETTKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATVKSNACRDHGGVKRGAKH
Ga0307469_1025025013300031720Hardwood Forest SoilMRRLISSLVVAVFCATSSPGFAQIGALKDGAKKAGSVTKEAGKATTDVAKKGAKATEKGTKKVAGETKDAVQTTYPCADGTTDAATLKDNACRNHGGVKPKAKH
Ga0307469_1118286023300031720Hardwood Forest SoilENSTMRRLISSLIVASFCVTGSAAFAQLGAVTDGAKKAGSATKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKKKH
Ga0307468_10014740223300031740Hardwood Forest SoilMRQLISSLIVASFCVTGSAAFAQLGAVKEGAKKAGSATKEAGKATVETTKDAAKATEKGTKKVAGKTKDAVQTTYVCGDGTTDQATLKANACRDHGGVRPEAKRKH
Ga0307468_10178079423300031740Hardwood Forest SoilMRRLISSLVVAVFCATSSPAFAQIGALKDGAKKAGSVTKEAGKATTDVAKKGAKATEKGTKKVAGETKDAVQTRYPCADGTTDAATLKDNACRNHGGVKPKAKH
Ga0307473_1146738713300031820Hardwood Forest SoilMRRLISSLIVASFCVTGTAAFAQLDAVTDAAKKAGSATKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDQATLKMNACRDHGGVRPEAKRKH
Ga0310904_1068369013300031854SoilMRRIISSLVVTAFCLTGSATFAQWGAVKEGAKKTGSVTKDAGKAAVDTTKDAASATKQGTEKVVSETKDVAQTTYVCADGKTDQATLKTNACRDHGGVKAKPKSKPKP
Ga0310901_1042734613300031940SoilSAAFAQFGAVKDGAEKVGSATKEAGKATAEATKDAAKATEKGTKKVAGETKKAVQTTYRCADGSTDQATVKSNACRDNGGVKRGAKH
Ga0307471_10018331633300032180Hardwood Forest SoilMRRLISSLVVAVFCATSSPAFAQIGALKDGAKKAGSVTKEAGKATTDVAKKGAKATEKGTKKVAGETKDAVQTTYPCADGTTDAATLKDNACRNH
Ga0307471_10145990713300032180Hardwood Forest SoilMRRLISSLIVASFCVTGTAAFAQLDAVTDAAKKAGSATKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKRKH
Ga0307472_10184686913300032205Hardwood Forest SoilMRQLISSLIVASFCVTGSAAFAQLDGVTDAAKKAGSATKEVGKATVETTKEAGKATAKGTQKVAGETKKAVQTTYRCADGTTDQATLKTNACRDHGGVRPEAKRKH
Ga0326726_1007821333300033433Peat SoilMRRFISSLVVAIFCLTGSASFAQFGAVKEGAKKAGSATKEAGKATVDTTKDVAKATEKGTKKVAGETKDAVQTNYVCVDGTTDQATLKTNACKDHGGVKANAKAKR
Ga0364931_0136941_435_7763300034176SedimentLLRGISIMRRLISSLVIATFCLTGSAAFAQFGAVKEGAKKAGSATKEAGKATVDTTKDVAKATEKGTKKVAGETKDAVQTNYVCVDGTTDQATLKTNACRNHGGVKANAKAKR
Ga0364941_188299_2_3103300034417SedimentMRRLISSLVIATFCLTGSAAFAQFGAVKEGAKKAGSATKEAGKATVDTTKDVAKATEKGTKKVAGETKDAVQTNYVCVDGTTDQATLKTNACRNHGGVKANAK

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