NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105402

Metagenome Family F105402

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105402
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 69 residues
Representative Sequence MATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Number of Associated Samples 52
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 72.22 %
% of genes near scaffold ends (potentially truncated) 5.00 %
% of genes from short scaffolds (< 2000 bps) 16.00 %
Associated GOLD sequencing projects 47
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (84.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Root
(36.000 % of family members)
Environment Ontology (ENVO) Unclassified
(72.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(65.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 14.58%    Coil/Unstructured: 85.42%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13963Transpos_assoc 14.00
PF06839zf-GRF 12.00
PF02992Transposase_21 2.00
PF13952DUF4216 1.00
PF13960DUF4218 1.00
PF13456RVT_3 1.00
PF13966zf-RVT 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A84.00 %
All OrganismsrootAll Organisms16.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005354|Ga0070675_100684180All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor933Open in IMG/M
3300005718|Ga0068866_10567049All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar761Open in IMG/M
3300005840|Ga0068870_10340197All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar959Open in IMG/M
3300006358|Ga0068871_100860535All Organisms → cellular organisms → Eukaryota838Open in IMG/M
3300006881|Ga0068865_101471809All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar609Open in IMG/M
3300009036|Ga0105244_10240581All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar845Open in IMG/M
3300009176|Ga0105242_10264453All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor1555Open in IMG/M
3300014486|Ga0182004_10009600Not Available7822Open in IMG/M
3300014486|Ga0182004_10040094Not Available2983Open in IMG/M
3300015276|Ga0182170_1015129All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar792Open in IMG/M
3300015286|Ga0182176_1080337All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar513Open in IMG/M
3300015302|Ga0182143_1032578All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar710Open in IMG/M
3300015302|Ga0182143_1050793All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar626Open in IMG/M
3300015361|Ga0182145_1070611All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar706Open in IMG/M
3300017415|Ga0182202_1085923All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar588Open in IMG/M
3300017435|Ga0182194_1017616All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar1112Open in IMG/M
3300025908|Ga0207643_10113491All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor1598Open in IMG/M
3300025935|Ga0207709_10249605All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor1295Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RootHost-Associated → Plants → Roots → Unclassified → Unclassified → Root36.00%
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere30.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere10.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere2.00%
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere2.00%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere2.00%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.00%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014486Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015267Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015276Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015285Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015286Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015291Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015292Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015299Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015302Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015313Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015314Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017409Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017680Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017681Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300021060Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MGHost-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
soilH1_1000266233300003321Sugarcane Root And Bulk SoilMATASGSSASHGFSKRLRPGLPLIPCGKCHDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0065712_1003315743300005290Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0068868_10205804913300005338Miscanthus RhizosphereMATASGSSVSHGFPKRLRPDLPLIPCGKCRDETKIVMEYRVKKEGPNKGHIFYKCPDRNVSYFIVFYDYG*
Ga0068868_10211454023300005338Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0070675_10068418013300005354Miscanthus RhizosphereMTTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0070674_10017827443300005356Miscanthus RhizosphereMTTASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0070674_10075028723300005356Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0070673_10119041713300005364Switchgrass RhizosphereMATASRSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0068867_10091672223300005459Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACSKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFIAFDDYG*
Ga0068856_10052144333300005614Corn RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCCDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0068866_1056704913300005718Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCLDRNVSYFVAFDDYG*
Ga0068870_1034019733300005840Miscanthus RhizosphereMVTASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0097621_10073836023300006237Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYQVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0068871_10086053533300006358Miscanthus RhizosphereGSSASHGFPKRLRPGLPLIACGKCCDETKIVIEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0068865_10147180923300006881Miscanthus RhizosphereMATAFGSSASHGFPKRLRPGLPLIPYGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRN
Ga0068865_10155082623300006881Miscanthus RhizosphereMATASGSSASHRVTKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0105244_1024058113300009036Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDEMKIVMEYRVKKEGPNKNRIFYKCPDRNVSYFIVFNDYG*
Ga0105243_1245608913300009148Miscanthus RhizosphereKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0105242_1026445313300009176Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVIEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0105246_1031369833300011119Miscanthus RhizosphereMATVSGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0105246_1211544023300011119Miscanthus RhizosphereMSTASGSSTSHGFPKRLRSGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0157374_1216536113300013296Miscanthus RhizosphereMITASGSLASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKEGPNKGRIFYKCSDRNVSYFIVFNDYG*
Ga0182004_10001915193300014486RootMTVSSDSSASHRVGNRMRPDLPLIACGECEENIVMEYRVKECPNKDRIFYKCPARNVSYFITFNDYG*
Ga0182004_1000449793300014486RootMTTVSGSLASHRVQKRMRSDLPLIACGEYQQNIMMEYRVKKECPNKGRIFYKCSDRNVSYFIIFDGYG*
Ga0182004_10009600113300014486RootMATTYASSASPGFSKRLRPGLPLIPCGKCDDEMKIVMEYRVKKEGPNKDRIFYKCPDCNMSYLLFDNYD*
Ga0182004_1001850513300014486RootMETTSASSASPGFSKRLRPGLPLIPCGKCDDETKIVMEYRLKKEGRNKGCIFYKCPDRNVSNLLAFDNYD*
Ga0182004_1001852833300014486RootMAAASDSSASHRVQKRMRLDLPFIAWGEYQRNIMKEYRVKKECPNKGRIFYKCLDRNLGYFIT*
Ga0182004_1001871633300014486RootMATTSASSASHGFSKRLRPGLPLIPCSKCDDEMKIVMEYRVKKEGPNKGRIFYKSPNCNVSYLLAFDNYN*
Ga0182004_1001885433300014486RootMTTASASSASHGFPKWLKSGLPLIPCGKCDDETKIVMEYQVKKEGPNKGHIFYKFPVRNVSYFLVFDDYG*
Ga0182004_1002179343300014486RootMATVTGSSVSQRVQKRHRPELPLIACGQCGQKMMEYKVSKEGVNKGCIFYKCLDRNVSYFQKFAYICAYFFNDVT*
Ga0182004_1002795133300014486RootMATLIGSSVSQRVQKRYRSELPLITCGKCGQKIVMEYKVSKDGVNKGRIFYRCLDCNVSYFQTFAYICAYFFNDIN*
Ga0182004_1003618913300014486RootMTTVTGSSVSQRVQKRYWPKLALITCGKCGQKIVMEYKVSKEGVNKGRIFYKCSDRNMSYFHTFAYICAYFFNDIN*
Ga0182004_1004009463300014486RootMATTSASSVSHGFPKRLRPGLPLIPCDKCDDEMKIVIEHRVKKEGPKKGLSSTSAQIAM*
Ga0182004_1004199833300014486RootMATVTWSSVSQQVQKRYRPEFPLITCGKCGQKIVMEYKVSKEGVNNGRIFYKCLDRNVSYFHTFAYICAYFF*
Ga0182004_1004468423300014486RootMATVTGSSVSQRVQKRYQPELLLITSGKCGQKIVMEYKVSKEGVNKGRIFYKCLDRNVSYFQTFPYICAYFFNDII*
Ga0182004_1004474633300014486RootMTGSSVSQRVQKRYWPELPLVTCGKCGQKIVMEYKVLKEGVIKGRIFYKCPDRNVSYF*
Ga0182004_1005968733300014486RootMATVTGSSVSQRVQKRYRPELPLITCSKCGQKIMMEYKVSKEEVNKGRIFYKCPDHNVSYFQTFAYICAYFFNDIT*
Ga0182004_1008787813300014486RootMATVTGSSVSQRVQKRYRPELPLITYGKCGQKIVMEYKVSKKGVNKGHIFYKCPDHNVSYFQTFSYICAYFFNDIN*
Ga0182004_1009977023300014486RootMATVIGSSVSQRVQKPYRPELPLITCGKCGQNIVMEYKVSKEGVNKGRIFYKCLDRNVNYFQTFAYICAYFFNDIN*
Ga0182004_1012824413300014486RootMATVTGSSVSQRVQKRYRPKLPLITCGKCGQKIVMEYKVSKEGVNKGRIFYKCLDRHLLIYVLIF*
Ga0182004_1014160023300014486RootMATMTGSSVSQRVPKQYQPELPLITCGKCGQNIVMEYKVSKERVNKGRIFYKYPDRNVSYFETFAYICTYFFNGVT*
Ga0182004_1014702123300014486RootMPTVTGSSVSQRVQKRYQPELPLITCGKCGQKIMMEYKVSKEGVNKGCIFYKCPDRNMSYFQTFAYICAYFFK*
Ga0182004_1015000023300014486RootMATVTGSSVSQRVQKRYRLELPLITCGKCGQKIVMEYKVSKERVNKGRIFYKCPDRNLSYFQTFAYICAYFFNGIN*
Ga0182004_1015376113300014486RootTVTGSSVSQRVQKRYRPELPLITCGKCGQKIVMEYKVSKEGINKGRIFYKCLDRNVSYFQTFSYICAYFFNDIN*
Ga0182004_1015959613300014486RootMATVTGSSVSQRVQKRKRPELHIITCGKCGQKIVMEYKVSKEGVNKGRIFYKCLDRNVSYFQIFAYICAYFNDIN*
Ga0182004_1019195813300014486RootMATVTGSSVCQRVQKRYRPELPLITCGKCGQKIVMEYKVSKEGVNKGRIFYKCSDRNVSYFQTFAYICAYFFK*
Ga0182004_1021016613300014486RootMATVTGSSVSQRVQKRYRLELPLITCGKCGQKIVMEYKVSKEGLNKGRIFNKCLDCNVSYFLTFAYICAFFNEIN*
Ga0182004_1021336213300014486RootTGSSVSQRVQKRYRPELPLITCGKCGQKILMEYKVSKEGVKKGRIFYKCPDRNVSYFQTFAYICAYFFK*
Ga0182004_1021489513300014486RootMATVTGSSVSQWVQKRYWPELPLITCGKCGQKIVMEYKVSKERVNNGRIFYKCPDRNVSFFQTFAYICAYFFK*
Ga0182004_1021586113300014486RootMATVTGSSVSQRVQKRYQPELPLITCGKCGQKIVMEYKVSKEGVNKGRIFYK*SDRNVSYFQTFAYICAYFLNDIN*
Ga0182004_1021615913300014486RootMATVTGFSVSQRVQKRYRSELPLITCGKCGHKIVMEYKVSKEGVNKGRIFYNYPDRNVSYFQIFAYIYAYFFK*
Ga0182004_1022933013300014486RootMATVNGSSVSQRVQKRYRPELPLITCGKCGQKILMEYNVSKEGVNKGRILYKCPDRNVSYFQTFAYICAYFLNDIN*
Ga0182004_1023173813300014486RootMATVTGSSVSQRVQKRYQPELPLITCGKCGQKIMMEYRVSKEGVNKGRIFYKCSDRNVSYFHTFAYICTYFFNDIN*
Ga0182004_1023763723300014486RootMATVTGSSVSQPVQKRYQPELPLITCGKCGQKIVMEYRVLKEGVNKGCPDRNVSYFQIFSYICAYFFNDIN*
Ga0182004_1024238413300014486RootMATVTGSSVSQRSQKRYRSQLPPITCGKCGQKIVMEYKVSKEGVNKGRIFYKCPDRNVSYFLAFAYICCLYMCSFFNNIN*
Ga0182004_1024387213300014486RootMATVTGSSVSQRVQKRYRPELSLITCGKCGQNILMEYKVSKEGVNKGRIFYKCLDRNVNYFQTFAYICVYFFK*
Ga0182004_1024817223300014486RootMATVIGSSVSQRVQKRYQPELPLITCGKCGQKIVMEYKVSKERVNKGRIFYKCPDRNVSYFQIFAYICAYFIK*
Ga0182004_1025591613300014486RootMATVTGSSVSQRVQKRYRSELPLITCGKCGQKIVIEYKVSKEGVNKGRIFYKCSDRNLSYFLTFAYICAYFLIILIKLLILSFYF*
Ga0157377_1064194113300014745Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKVGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0157377_1114044223300014745Miscanthus RhizosphereMATAFGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYQVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0182122_103148313300015267Miscanthus PhyllosphereMATAFGSSASHRVTKQLRPDLPLIAWGKCEEKIVMEYRVRKVCPNKGRIFYKCPHRNVSYFVAFDDY
Ga0182122_104765013300015267Miscanthus PhyllosphereMATASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKEGPNKGRIFYKCPNRNVSYFIIFNDYG*
Ga0182188_101015013300015274Miscanthus PhyllosphereMTTVFGSSASHRAPKRLRPDLPLIACGKCEEKIVLEYQVRKECPNKGRIFYKCLDRNVSYFVEFDDYG*
Ga0182188_102041213300015274Miscanthus PhyllosphereMATASGSSASHRVTKRLRPDLPLIACGKCEEKIVIEYRVRKECPNKGRIFYKCPDRNVSY
Ga0182170_101512933300015276Miscanthus PhyllosphereASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0182186_102788213300015285Miscanthus PhyllosphereMATASGSSTSHRVPKRLRPDLPLIACDKCEEKIVMEYRVRKKCHNKGRIFYKCSDRNMSYFVVFDDYG*
Ga0182176_100766543300015286Miscanthus PhyllosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCSDRNVSYFVVFDDYG*
Ga0182176_108033723300015286Miscanthus PhyllosphereSHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDHIFYKCSDRNVSYFIVFNDYG*
Ga0182125_103703913300015291Miscanthus PhyllosphereMATASGFSASHGVPQRLRPDLPLIACGECEQKIVSKDRVKKEGPNKGHIFYKCPDHN
Ga0182125_108494513300015291Miscanthus PhyllosphereMATASGSSASHGVPKRLRPGLPLIPCGKCHDETKIVMEYRVKKEGPNKSRIFYKCPDRNVSYFIVFNDYG*
Ga0182141_108721813300015292Miscanthus PhyllosphereMATASGSSASHGFPKRLRSGLPLIACGKCCDETKIVMEYRVKEGPNKGRIFYKCPDHNMSYFIVFNDYG*
Ga0182106_108583813300015298Miscanthus PhyllosphereMVTASGSSASDRVPRRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0182107_110487923300015299Miscanthus PhyllosphereMATTSGSSASHGLPERLRPDLPLIACGKCEEKIVMEYRVRKECPNKDRIFYRCLDLNVSYFVAFDDYG*
Ga0182143_103257823300015302Miscanthus PhyllosphereMATASGSSASHRVLKRLRPDLPLIARGKCEEKIVMEYRVRKECPNKGRMFYKCPDRNVSYFVAFDDYG*
Ga0182143_105079323300015302Miscanthus PhyllosphereMATASGSSVSHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0182143_108280713300015302Miscanthus PhyllosphereMATASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYK
Ga0182164_102042213300015313Switchgrass PhyllosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKGHIFYKCPDHNVSYFIVFNDY
Ga0182140_111560923300015314Miscanthus PhyllosphereMATASGPSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCLDRNVSFFIVFNDYG*
Ga0182187_110954413300015341Miscanthus PhyllosphereTASGSSASHWVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCLDHNVSYFVAFDDYG*
Ga0182111_120799813300015345Miscanthus PhyllosphereMATASGSSVSHGFPKRLRPGLPLIACDKCCDETKIVTEYRVKNEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0182177_117079613300015347Miscanthus PhyllosphereMETASGSSASHGVPKRLRPDLPLIACDKCGQKTVLEYRVKKKGPNQGRIFYICLDHNVSYYFCHVL*
Ga0182161_106125723300015351Miscanthus PhyllosphereMATASGSSASHRVPKRLRPDLPLIACGECEQKIVLEYRVKKEGPNKGRIFYRCLDRNVSSFGHVVFYGL*
Ga0182145_107061123300015361Miscanthus PhyllosphereMATAFGSSASHRVTKRLRPDLPLITCGKCEEKIVMEYRVTKECPNKGRIFYKCPNRNVSYFVAFDDYG*
Ga0182204_107233713300017409Miscanthus PhyllosphereMATASGSATSHGFPKRLRPGLPLIPCGKCHDETKIVMAYRGKKEGPNKG
Ga0182207_105671423300017410Miscanthus PhyllosphereMATASGSSASHRVTKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0182222_100552613300017413Miscanthus PhyllosphereMSTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0182222_100585413300017413Miscanthus PhyllosphereMATASGSSASHGFPKRLRPGLSLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG
Ga0182202_108592323300017415Miscanthus PhyllosphereMATASGSSASHGFSKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG
Ga0182224_111024813300017425Miscanthus PhyllosphereMVTAFGSSPSHGVPKRLRPDHPLIACGECKQKTVLKYKVMQQCPNHGRVFYKCMDRIVSSFGHVFFMLYSLFYDFN
Ga0182194_101761623300017435Switchgrass PhyllosphereMTTASGSSASHGFPKRLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDCNVSYFIVFNDYG
Ga0182233_102327833300017680Miscanthus PhyllosphereMTTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKEYPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0182226_106135113300017681Miscanthus PhyllosphereMATASGSSASHRVTKRLRPDLPLIACGKCEEKIVMEYWVRKECPNKGRIFYKCPDHNVSYFVAFDDYG
Ga0182232_102646113300021060PhyllosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYF
Ga0182232_106058913300021060PhyllosphereMATASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG
Ga0207642_1000387833300025899Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG
Ga0207688_1087943823300025901Corn, Switchgrass And Miscanthus RhizosphereMTTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0207643_1011349133300025908Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0207709_1024960513300025935Miscanthus RhizosphereKMRNLHYIKNEYREYMSTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0207691_1030688523300025940Miscanthus RhizosphereMATASGSSASHRVPKRLRPDVPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0207677_1026813113300026023Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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