 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105387 |
| Family Type | Metagenome |
| Number of Sequences | 100 |
| Average Sequence Length | 126 residues |
| Representative Sequence | VRLAPSTKEKLDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPAR |
| Number of Associated Samples | 100 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 5.00 % |
| % of genes from short scaffolds (< 2000 bps) | 5.00 % |
| Associated GOLD sequencing projects | 99 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (95.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (39.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (43.000 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 83.58% β-sheet: 0.00% Coil/Unstructured: 16.42% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF01381 | HTH_3 | 4.00 |
| PF00854 | PTR2 | 2.00 |
| PF12697 | Abhydrolase_6 | 2.00 |
| PF13560 | HTH_31 | 2.00 |
| PF00072 | Response_reg | 1.00 |
| PF00912 | Transgly | 1.00 |
| PF00082 | Peptidase_S8 | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG3104 | Dipeptide/tripeptide permease | Amino acid transport and metabolism [E] | 2.00 |
| COG0744 | Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase | Cell wall/membrane/envelope biogenesis [M] | 1.00 |
| COG4953 | Membrane carboxypeptidase/penicillin-binding protein PbpC | Cell wall/membrane/envelope biogenesis [M] | 1.00 |
| COG5009 | Membrane carboxypeptidase/penicillin-binding protein | Cell wall/membrane/envelope biogenesis [M] | 1.00 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 95.00 % |
| All Organisms | root | All Organisms | 5.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300005615|Ga0070702_100902690 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 692 | Open in IMG/M |
| 3300009176|Ga0105242_11674604 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 672 | Open in IMG/M |
| 3300012285|Ga0137370_10120378 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 1496 | Open in IMG/M |
| 3300012898|Ga0157293_10090369 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 770 | Open in IMG/M |
| 3300018081|Ga0184625_10081452 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 1656 | Open in IMG/M |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 21.00% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 12.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 8.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 5.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 4.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 4.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 3.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 2.00% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 1.00% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 1.00% |
| Prmafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.00% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2199352025 | Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL | Environmental | Open in IMG/M |
| 3300000891 | Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil | Environmental | Open in IMG/M |
| 3300005171 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 | Environmental | Open in IMG/M |
| 3300005179 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 | Environmental | Open in IMG/M |
| 3300005184 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 | Environmental | Open in IMG/M |
| 3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005554 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 | Environmental | Open in IMG/M |
| 3300005557 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 | Environmental | Open in IMG/M |
| 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
| 3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
| 3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
| 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006864 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 | Environmental | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300009029 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189 | Environmental | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
| 3300010042 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B | Environmental | Open in IMG/M |
| 3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
| 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010364 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300012198 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012354 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012359 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG | Environmental | Open in IMG/M |
| 3300012885 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 | Environmental | Open in IMG/M |
| 3300012893 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1 | Environmental | Open in IMG/M |
| 3300012895 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2 | Environmental | Open in IMG/M |
| 3300012898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1 | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012975 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015 | Environmental | Open in IMG/M |
| 3300012977 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014150 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015201 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
| 3300018053 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1 | Environmental | Open in IMG/M |
| 3300018061 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1 | Environmental | Open in IMG/M |
| 3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
| 3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
| 3300018431 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104 | Environmental | Open in IMG/M |
| 3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
| 3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
| 3300019868 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1 | Environmental | Open in IMG/M |
| 3300019874 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1 | Environmental | Open in IMG/M |
| 3300019883 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2 | Environmental | Open in IMG/M |
| 3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
| 3300019997 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2 | Environmental | Open in IMG/M |
| 3300020016 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1 | Environmental | Open in IMG/M |
| 3300023058 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1 | Environmental | Open in IMG/M |
| 3300024347 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027655 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028608 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6 | Environmental | Open in IMG/M |
| 3300028768 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119 | Environmental | Open in IMG/M |
| 3300028791 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144 | Environmental | Open in IMG/M |
| 3300028807 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186 | Environmental | Open in IMG/M |
| 3300028884 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031747 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22 | Environmental | Open in IMG/M |
| 3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
| 3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
| 3300031946 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172 | Environmental | Open in IMG/M |
| 3300031996 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2 | Environmental | Open in IMG/M |
| 3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| deepsgr_01414460 | 2199352025 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIY |
| JGI10214J12806_134161671 | 3300000891 | Soil | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRHRVYELYAGFDSTAWWWARNIYDQARILYL |
| Ga0066677_107051091 | 3300005171 | Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAH |
| Ga0066684_100567411 | 3300005179 | Soil | VPLAPATKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAH |
| Ga0066671_103876012 | 3300005184 | Soil | MLLGSLLIPWIVGRSSKQAALADTRLKQAMQVMTTSNGVDATINKIETAFEGFEKDSLSIEQQDEFLRRREDLRKRVYELYSDFDSTAWWWPRNIYDQAHILHLISPARLDKLNEYIGRYNSNLVETAHAIDIPWHAY |
| Ga0066676_111738051 | 3300005186 | Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREALRDRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNQQIAQYNNNLVETAHA |
| Ga0070676_113659542 | 3300005328 | Miscanthus Rhizosphere | MLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNEVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRKRVYELYAGFDSTAWWW |
| Ga0070670_1015172391 | 3300005331 | Switchgrass Rhizosphere | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQTRILHLIP |
| Ga0070666_108130991 | 3300005335 | Switchgrass Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRHRVYELYAGFDSTAWWWARNIYDQARILHLMSPARLDKLNEHIGQYNNNLVETAH |
| Ga0070687_1012113031 | 3300005343 | Switchgrass Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLVIEEQDEFLQRREDLRHRVYELYAEFDSTA |
| Ga0070668_1021304111 | 3300005347 | Switchgrass Rhizosphere | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQPDEFLRRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPA |
| Ga0070667_1008912552 | 3300005367 | Switchgrass Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNEVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRKRVYELYAGFDSTAWWWA |
| Ga0070694_1012356472 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRPSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLVIEQQDEFLRRREDLRKRVYELYAEF |
| Ga0066661_104236441 | 3300005554 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISP |
| Ga0066704_102882242 | 3300005557 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNQHIGQYNNNLVETAHAIDIPWHA |
| Ga0068854_1017010871 | 3300005578 | Corn Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLVIEEQDEFLQRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNQQIEQYNNNLVETAHA |
| Ga0070702_1009026902 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELY |
| Ga0068852_1025702051 | 3300005616 | Corn Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLMSPA |
| Ga0068863_1014496631 | 3300005841 | Switchgrass Rhizosphere | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAH |
| Ga0068862_1022157911 | 3300005844 | Switchgrass Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSKEVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRKRVYELYAGFDSTAWWWARNIYDQ |
| Ga0066696_106549342 | 3300006032 | Soil | VLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREGLRNRVYELYAEFDSTAWWWARNIYDQARILHL |
| Ga0066652_1002361451 | 3300006046 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIDQKDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAHAIDIPWHAYL |
| Ga0097621_1017692371 | 3300006237 | Miscanthus Rhizosphere | MLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRHRVYELYAGFDSTAWWWAR |
| Ga0075428_1022293971 | 3300006844 | Populus Rhizosphere | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPA |
| Ga0075425_1021758131 | 3300006854 | Populus Rhizosphere | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQ |
| Ga0066797_13259231 | 3300006864 | Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIG |
| Ga0075424_1028529311 | 3300006904 | Populus Rhizosphere | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAW |
| Ga0066793_107267921 | 3300009029 | Prmafrost Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYN |
| Ga0066709_1017223031 | 3300009137 | Grasslands Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATMNKIETAFEGFEKDSLLIEQQDEFLRRREDLRNRVYELYAEFDSTAWWWA |
| Ga0105242_116746041 | 3300009176 | Miscanthus Rhizosphere | MRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRPSKQAAVADTRLKQALQVMATSNGVDATISKLETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEF |
| Ga0105249_122700022 | 3300009553 | Switchgrass Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSKEVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRKRVYELYAGFDSTAW |
| Ga0126315_111202051 | 3300010038 | Serpentine Soil | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKMETAFEGFEKDSLLIEQQDEFLRRREDLRHRVYELYAEFDSTAWWWAPNIYDQARILHLISPA |
| Ga0126314_111079971 | 3300010042 | Serpentine Soil | MQTLPLLRQLLEPHHAIGSSTKEKIDFFLRHSLTLSLTGMLLGSLLIPWIVGRSRKQAAVADTRLKQALQVMVTSNGVDATINKIKTAFEGFEKDSLPIEQQDEFLRRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLN |
| Ga0126373_103194682 | 3300010048 | Tropical Forest Soil | VRLDPFLRHPLTLSLTGTLLGSLLIPWIVGRSSKQAALADTRVKQAIQVMATSNGVDATINKIKTAFEGFEKDALSIEQQDEFLRRREDLRKRVYDLYSDFDSTGWWWARNIYDQAHILHLICPRIWTD* |
| Ga0099796_105638601 | 3300010159 | Vadose Zone Soil | VRLAPSTKEKLDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWW |
| Ga0126376_102047323 | 3300010359 | Tropical Forest Soil | LLGSLLIPWIVGRSSKQAALADTRVKQAIQVMATSNGVDATINKIKTAFESFEKDALPVEQQDEFLRRREDLSKRVYELYSDFDSTGWWWARNIMTKPRFFTSFRPRVWTK* |
| Ga0134066_101489261 | 3300010364 | Grasslands Soil | VRLAPSAKEKIDFFLRHPLTLSLTGMLLGSLLIPSIVGRSSKQAAVADTRLKQALQVMATSNEVDATINKIKTAFEGFEKDSLPIEQQDEFLRRREDLRHRVYELYAGFDSTAWWWARNIYDQARILH |
| Ga0105239_135125021 | 3300010375 | Corn Rhizosphere | LSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWAYSR* |
| Ga0137364_114455601 | 3300012198 | Vadose Zone Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLV |
| Ga0137383_113553461 | 3300012199 | Vadose Zone Soil | MKIDLFLRHPLTLSLTGMLLGSLLIPWIVGRSSKEAALADTRVKQAMQVMATSNGVDATVNKIKTAFEGFEKDALSIEQQDEFLRQREDLRKRVHELY |
| Ga0137380_114976511 | 3300012206 | Vadose Zone Soil | MKIDLFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRHRVYELYAEFDSTAWWWARNIYDQA |
| Ga0137381_117708451 | 3300012207 | Vadose Zone Soil | MKIDLFLRHPLTLSLTGMLLGSLLIPWIVGRSSKEAALADTRVKQAMQVMATSNGVDATVNKIKTAFEGFEKDALSIEQQDEFLRQREDLRKRVHELYSEFDSTGWWWARNIYDQAHILHLISPA |
| Ga0137376_105460782 | 3300012208 | Vadose Zone Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNQHIGQYNNNLVETAHAI |
| Ga0137370_101203781 | 3300012285 | Vadose Zone Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWGRNTYDQARILHL |
| Ga0137366_112140981 | 3300012354 | Vadose Zone Soil | MKIDLFLRHPLTLSLTGMFLGSLLIPWIVGRSSKEAALADTRVKQAMQVMATSNGVDATVNKIKTAFEGFEKDALSIEQQDEFLRQREDLRKRVHELYSEFD |
| Ga0137385_112160121 | 3300012359 | Vadose Zone Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREGLRNRVYELYA |
| Ga0157287_10085311 | 3300012885 | Soil | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLVIEEQDEFLQRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNQQIEQYNNNLVETAHAI |
| Ga0157284_102346201 | 3300012893 | Soil | MRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRHRVYELYAGFDSTAWWWARNIYDQARILHLISPARLDRLNEHI |
| Ga0157309_100930161 | 3300012895 | Soil | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRH |
| Ga0157293_100903691 | 3300012898 | Soil | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLVIEEQDEFLQRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNQQIEQYNNNL |
| Ga0137359_112923362 | 3300012923 | Vadose Zone Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLI |
| Ga0164298_111419741 | 3300012955 | Soil | MRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRHRVYELYAGFDSTAWWWARNIYDQARILHL |
| Ga0164303_103168252 | 3300012957 | Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQ* |
| Ga0134110_105403701 | 3300012975 | Grasslands Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKRAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRNRVYELYAEFDSTAWWWARNIYDQA |
| Ga0134087_104641711 | 3300012977 | Grasslands Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEQIGQY |
| Ga0164305_120986961 | 3300012989 | Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIG |
| Ga0163162_107786621 | 3300013306 | Switchgrass Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNEVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRKRVYELYAGFDSTAWWWARNIYDQARILHLIS |
| Ga0157372_128516941 | 3300013307 | Corn Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAHAIDI |
| Ga0134081_103815851 | 3300014150 | Grasslands Soil | VPLAPSTKEKIDFFLRHPLTLSLTGVLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATMNKIETAFEGFEKDSLLIEQQDEFLRRREGLRNRVYELYAEFDSTAWWW |
| Ga0163163_127029951 | 3300014325 | Switchgrass Rhizosphere | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLVIEEQDEFLQRREDLRHRVYELYAEFDSTAWWWARN |
| Ga0157377_103009042 | 3300014745 | Miscanthus Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNEVDATINKIKTAFEGFEKDSLPIEQEDEFLRRREDLRKRVYELYAGFDSTAWWWARNIYDQARILHLISPARLDKLNQQIEQYNNNLVETAH |
| Ga0173478_104982751 | 3300015201 | Soil | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGRYNSNLVETAHAVDIPWHAYL |
| Ga0132258_117181682 | 3300015371 | Arabidopsis Rhizosphere | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAHAIDIPWH |
| Ga0132256_1017997291 | 3300015372 | Arabidopsis Rhizosphere | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNQHIGRYNNNLV |
| Ga0184608_103985351 | 3300018028 | Groundwater Sediment | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNE |
| Ga0184626_104381601 | 3300018053 | Groundwater Sediment | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRETLRNRVYELYAELIALPGGGH |
| Ga0184619_103531152 | 3300018061 | Groundwater Sediment | MLLGSLLIPWIVGRSSKQAAMADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYD |
| Ga0184624_101737881 | 3300018073 | Groundwater Sediment | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLFETAH |
| Ga0184625_100814522 | 3300018081 | Groundwater Sediment | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAHA |
| Ga0066655_104210211 | 3300018431 | Grasslands Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATMNKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYSDFDSTAWWWPRNIYDQAHILRLISPARLDKLNEYIGR |
| Ga0066662_125149982 | 3300018468 | Grasslands Soil | MLLGSLLIPWIVGRSSKQAALADTRLKQAMQVMTTSNGVDATINKIETAFEGFEKDSLSIEQQDEFLRRREDLRKRVYELYSDFDSTAWWWPRNIYDQAHIL |
| Ga0066669_111259772 | 3300018482 | Grasslands Soil | LRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQLMATSNGVDATINKIETAFEGFEKDTLLIDQKDEFLRRRENLRNRVYELYAEFDSTAGWWARNIYDQARILHLISPAHWTN |
| Ga0193720_10458941 | 3300019868 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLPIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHI |
| Ga0193744_11115161 | 3300019874 | Soil | MRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVVDTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETA |
| Ga0193725_10757642 | 3300019883 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAHAIDIPW |
| Ga0193728_12552431 | 3300019890 | Soil | VRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILQLISPARL |
| Ga0193711_10370651 | 3300019997 | Soil | VPVRLGLVAAAYHRRCRLYRCCDNCYNLIVRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWW |
| Ga0193696_10135171 | 3300020016 | Soil | MRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWW |
| Ga0193714_10249481 | 3300023058 | Soil | MRLAPSTKAKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISP |
| Ga0179591_12540011 | 3300024347 | Vadose Zone Soil | LRHPLTLSLTGMLLGSLLIPWIVGRSTKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQLQ |
| Ga0207684_109296971 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | VRLAPSTKEKLDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPARL |
| Ga0207663_110369961 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | VRLAPSTKEKLDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPAR |
| Ga0207701_104941821 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFVA |
| Ga0207711_109110952 | 3300025941 | Switchgrass Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLVIEEQDEFLQRRESASSGIRAVC |
| Ga0207668_112771161 | 3300025972 | Switchgrass Rhizosphere | MRLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRQREDLRKRVHELYSEFDSTGWWWARNIYDQARILHLISPARLDKSPAILSRVSSPG |
| Ga0207703_111073461 | 3300026035 | Switchgrass Rhizosphere | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLVIEEQDEFLQRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNQQIEQYNNNLVETAH |
| Ga0209388_10471451 | 3300027655 | Vadose Zone Soil | MRRRSKCVRAISSPRKMKIDLFLRHPLTLSLTGMLLGSLLIPWIVGRSSKEAALADTRVKQAMQVMATSNGVDATVNKIKTAFEGFEKDALSIEQQDEFLRQREDLRKRVHELYSEFDSTGWWW |
| Ga0247819_106213201 | 3300028608 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEQHRAV |
| Ga0307280_101662911 | 3300028768 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQAR |
| Ga0307290_101799962 | 3300028791 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWGRNIYDQARILHLISPARLDKLNE |
| Ga0307305_105104681 | 3300028807 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAHA |
| Ga0307308_103165581 | 3300028884 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDST |
| Ga0307304_102315792 | 3300028885 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRRENLRNRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEHIGQYNNNLVETAHAIDIPWHAYL |
| Ga0170823_137787022 | 3300031128 | Forest Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLSIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNL |
| Ga0318502_106099962 | 3300031747 | Soil | VRLDPFLRHPLTLSLTGTLLGSLLIPWIVGRSSKQAALADTRVKQAIQVMATSNGVDATINKIKTAFEGFEKDTLSIEQQDEFLRRREDLRKRVYDLYSDFDSTAWW |
| Ga0310904_110291601 | 3300031854 | Soil | MLLGSLLIPWIVGRSSKQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLLIEQQDEFLRRREDLRKRVYELYAEFDSTAWWWARNIYDQARILHLISPARL |
| Ga0306923_107290241 | 3300031910 | Soil | VRFDPFLRHPLTLSLTGTLLGSLLIPWIVGRSSKQAALADTRVKQAIQVMATSNGVDATINKIKTAFEGFEKDALSIEQQGEFLRRREDLRKRVYELYSDFDSTGW |
| Ga0310910_115139151 | 3300031946 | Soil | VRFDPFLRHPLTLSLTGTLLGSLLIPWIVGRSSKQAALADTRVKQAIQVMATSNGVDATINKIKTAFEGFEKDALSIEQQGEFLRRREDLRKRVYELYSDFDSTGWWWARNIYDQAHILRLISPAHLDKLNEYIGQYNNNLVETAHTI |
| Ga0308176_110773462 | 3300031996 | Soil | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLVIEQQDEFVRRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNEQIGQYN |
| Ga0310812_105353041 | 3300032421 | Soil | VPLAPSTKEKIDFFLRHPLTLSLTGMLLGSLLIPWIVGRSSQQAAVADTRLKQALQVMATSNGVDATINKIETAFEGFEKDSLTIEQQDEFLRRREDLRHRVYELYAEFDSTAWWWARNIYDQARILHLISPARLDKLNE |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |