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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105268 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 51 residues |
| Representative Sequence | MIRRITGIVLGVLAFLLVYWLTGLGTPSEPNWALALLVGLVVALIWPWI |
| Number of Associated Samples | 92 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Bacteria |
| % of genes with valid RBS motifs | 97.00 % |
| % of genes near scaffold ends (potentially truncated) | 97.00 % |
| % of genes from short scaffolds (< 2000 bps) | 94.00 % |
| Associated GOLD sequencing projects | 88 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.71 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Bacteria (82.000 % of family members) |
| NCBI Taxonomy ID | 2 |
| Taxonomy | All Organisms → cellular organisms → Bacteria |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (38.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (41.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 53.25% β-sheet: 0.00% Coil/Unstructured: 46.75% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.71 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| f.34.1.1: Mechanosensitive channel protein MscS (YggB), transmembrane region | d2vv5a3 | 2vv5 | 0.79315 |
| d.135.1.1: The spindle assembly checkpoint protein mad2 | d2qyfa_ | 2qyf | 0.71248 |
| c.72.1.0: automated matches | d4b8ra_ | 4b8r | 0.71239 |
| f.42.1.1: Mitochondrial carrier | d1okca_ | 1okc | 0.7113 |
| f.57.1.1: MgtE membrane domain-like | d2zy9a3 | 2zy9 | 0.70134 |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF04542 | Sigma70_r2 | 27.00 |
| PF04545 | Sigma70_r4 | 10.00 |
| PF01571 | GCV_T | 8.00 |
| PF08281 | Sigma70_r4_2 | 7.00 |
| PF05014 | Nuc_deoxyrib_tr | 4.00 |
| PF09966 | DUF2200 | 4.00 |
| PF03706 | LPG_synthase_TM | 3.00 |
| PF01807 | zf-CHC2 | 2.00 |
| PF00970 | FAD_binding_6 | 2.00 |
| PF00175 | NAD_binding_1 | 2.00 |
| PF02909 | TetR_C_1 | 2.00 |
| PF13662 | Toprim_4 | 1.00 |
| PF08031 | BBE | 1.00 |
| PF06897 | DUF1269 | 1.00 |
| PF08002 | DUF1697 | 1.00 |
| PF12740 | Chlorophyllase2 | 1.00 |
| PF13480 | Acetyltransf_6 | 1.00 |
| PF06863 | DUF1254 | 1.00 |
| PF03928 | HbpS-like | 1.00 |
| PF00126 | HTH_1 | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG0568 | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) | Transcription [K] | 27.00 |
| COG1191 | DNA-directed RNA polymerase specialized sigma subunit | Transcription [K] | 27.00 |
| COG1595 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family | Transcription [K] | 27.00 |
| COG4941 | Predicted RNA polymerase sigma factor, contains C-terminal TPR domain | Transcription [K] | 27.00 |
| COG3613 | Nucleoside 2-deoxyribosyltransferase | Nucleotide transport and metabolism [F] | 4.00 |
| COG0392 | Predicted membrane flippase AglD2/YbhN, UPF0104 family | Cell wall/membrane/envelope biogenesis [M] | 3.00 |
| COG0358 | DNA primase (bacterial type) | Replication, recombination and repair [L] | 2.00 |
| COG1309 | DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA | Transcription [K] | 2.00 |
| COG0277 | FAD/FMN-containing lactate dehydrogenase/glycolate oxidase | Energy production and conversion [C] | 1.00 |
| COG3797 | Uncharacterized conserved protein, DUF1697 family | Function unknown [S] | 1.00 |
| COG4803 | Uncharacterized membrane protein | Function unknown [S] | 1.00 |
| COG5361 | Uncharacterized conserved protein | Mobilome: prophages, transposons [X] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 82.00 % |
| Unclassified | root | N/A | 18.00 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300000891|JGI10214J12806_10862273 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 548 | Open in IMG/M |
| 3300000955|JGI1027J12803_105480895 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1195 | Open in IMG/M |
| 3300001213|JGIcombinedJ13530_102957691 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 724 | Open in IMG/M |
| 3300002568|C688J35102_118357149 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 552 | Open in IMG/M |
| 3300004013|Ga0055465_10060473 | All Organisms → cellular organisms → Bacteria | 1045 | Open in IMG/M |
| 3300004114|Ga0062593_103235635 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 522 | Open in IMG/M |
| 3300005093|Ga0062594_102341179 | All Organisms → cellular organisms → Bacteria | 582 | Open in IMG/M |
| 3300005162|Ga0066814_10086921 | Not Available | 569 | Open in IMG/M |
| 3300005168|Ga0066809_10166981 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 579 | Open in IMG/M |
| 3300005334|Ga0068869_101790207 | Not Available | 549 | Open in IMG/M |
| 3300005343|Ga0070687_100890315 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 637 | Open in IMG/M |
| 3300005457|Ga0070662_101401935 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 602 | Open in IMG/M |
| 3300005518|Ga0070699_101495431 | All Organisms → cellular organisms → Bacteria | 619 | Open in IMG/M |
| 3300005535|Ga0070684_100453807 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1185 | Open in IMG/M |
| 3300005539|Ga0068853_100841183 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 880 | Open in IMG/M |
| 3300005578|Ga0068854_101118126 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14 | 703 | Open in IMG/M |
| 3300005617|Ga0068859_101145566 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 856 | Open in IMG/M |
| 3300006358|Ga0068871_101669048 | All Organisms → cellular organisms → Bacteria | 604 | Open in IMG/M |
| 3300006358|Ga0068871_101866540 | All Organisms → cellular organisms → Bacteria | 571 | Open in IMG/M |
| 3300006581|Ga0074048_12550018 | Not Available | 657 | Open in IMG/M |
| 3300006806|Ga0079220_11178507 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 629 | Open in IMG/M |
| 3300006881|Ga0068865_101027554 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 723 | Open in IMG/M |
| 3300009098|Ga0105245_11514973 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 722 | Open in IMG/M |
| 3300009156|Ga0111538_13092862 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 580 | Open in IMG/M |
| 3300010154|Ga0127503_10128037 | Not Available | 501 | Open in IMG/M |
| 3300010399|Ga0134127_10441849 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14 | 1298 | Open in IMG/M |
| 3300010400|Ga0134122_10697796 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 953 | Open in IMG/M |
| 3300011107|Ga0151490_1550215 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 532 | Open in IMG/M |
| 3300011119|Ga0105246_11160185 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 709 | Open in IMG/M |
| 3300012208|Ga0137376_11088939 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 683 | Open in IMG/M |
| 3300012505|Ga0157339_1053084 | Not Available | 542 | Open in IMG/M |
| 3300012882|Ga0157304_1103912 | Not Available | 522 | Open in IMG/M |
| 3300012897|Ga0157285_10220347 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 607 | Open in IMG/M |
| 3300012901|Ga0157288_10127717 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 730 | Open in IMG/M |
| 3300012914|Ga0157297_10520477 | Not Available | 504 | Open in IMG/M |
| 3300012955|Ga0164298_10283375 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1017 | Open in IMG/M |
| 3300012955|Ga0164298_10448303 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 848 | Open in IMG/M |
| 3300012955|Ga0164298_10825351 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 666 | Open in IMG/M |
| 3300012958|Ga0164299_11389533 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 542 | Open in IMG/M |
| 3300012961|Ga0164302_10580170 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 809 | Open in IMG/M |
| 3300012971|Ga0126369_10478848 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 1299 | Open in IMG/M |
| 3300012985|Ga0164308_10024863 | All Organisms → cellular organisms → Bacteria | 3561 | Open in IMG/M |
| 3300013308|Ga0157375_13125262 | All Organisms → cellular organisms → Bacteria | 552 | Open in IMG/M |
| 3300014266|Ga0075359_1136455 | Not Available | 538 | Open in IMG/M |
| 3300014325|Ga0163163_10026527 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales | 5540 | Open in IMG/M |
| 3300014326|Ga0157380_11600505 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 707 | Open in IMG/M |
| 3300015077|Ga0173483_10245423 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 849 | Open in IMG/M |
| 3300015200|Ga0173480_10198855 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 1061 | Open in IMG/M |
| 3300015200|Ga0173480_10872056 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 582 | Open in IMG/M |
| 3300015371|Ga0132258_11757275 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1563 | Open in IMG/M |
| 3300015372|Ga0132256_101104319 | All Organisms → cellular organisms → Bacteria | 907 | Open in IMG/M |
| 3300015373|Ga0132257_104377205 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 514 | Open in IMG/M |
| 3300015374|Ga0132255_101301888 | All Organisms → cellular organisms → Bacteria | 1096 | Open in IMG/M |
| 3300015374|Ga0132255_105643211 | Not Available | 529 | Open in IMG/M |
| 3300015374|Ga0132255_105800603 | Not Available | 522 | Open in IMG/M |
| 3300016270|Ga0182036_11698395 | Not Available | 533 | Open in IMG/M |
| 3300016422|Ga0182039_11098972 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 716 | Open in IMG/M |
| 3300017792|Ga0163161_11441054 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 603 | Open in IMG/M |
| 3300017959|Ga0187779_10183561 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1303 | Open in IMG/M |
| 3300017965|Ga0190266_10197952 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales | 957 | Open in IMG/M |
| 3300018084|Ga0184629_10404750 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 717 | Open in IMG/M |
| 3300018476|Ga0190274_11189703 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 846 | Open in IMG/M |
| 3300019361|Ga0173482_10446835 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 613 | Open in IMG/M |
| 3300020005|Ga0193697_1065091 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 898 | Open in IMG/M |
| 3300020020|Ga0193738_1132368 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 686 | Open in IMG/M |
| 3300022883|Ga0247786_1053329 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 822 | Open in IMG/M |
| 3300022886|Ga0247746_1134398 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 623 | Open in IMG/M |
| 3300022899|Ga0247795_1083944 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 558 | Open in IMG/M |
| 3300022915|Ga0247790_10144510 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 610 | Open in IMG/M |
| 3300025792|Ga0210143_1044200 | Not Available | 786 | Open in IMG/M |
| 3300025931|Ga0207644_10886409 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 748 | Open in IMG/M |
| 3300025933|Ga0207706_11244845 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 617 | Open in IMG/M |
| 3300025934|Ga0207686_10829650 | All Organisms → cellular organisms → Bacteria | 743 | Open in IMG/M |
| 3300025937|Ga0207669_11499634 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 575 | Open in IMG/M |
| 3300025938|Ga0207704_11958713 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 504 | Open in IMG/M |
| 3300025941|Ga0207711_10154573 | All Organisms → cellular organisms → Bacteria | 2072 | Open in IMG/M |
| 3300025945|Ga0207679_10567265 | Not Available | 1020 | Open in IMG/M |
| 3300025947|Ga0210067_1019441 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 885 | Open in IMG/M |
| 3300025972|Ga0207668_10403185 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1157 | Open in IMG/M |
| 3300025986|Ga0207658_12197569 | Not Available | 501 | Open in IMG/M |
| 3300026095|Ga0207676_10892557 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 871 | Open in IMG/M |
| 3300026118|Ga0207675_100769114 | All Organisms → cellular organisms → Bacteria | 975 | Open in IMG/M |
| 3300026118|Ga0207675_101276677 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14 | 755 | Open in IMG/M |
| 3300027907|Ga0207428_10374623 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 1045 | Open in IMG/M |
| 3300028754|Ga0307297_10133056 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 839 | Open in IMG/M |
| 3300028802|Ga0307503_10777171 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 545 | Open in IMG/M |
| 3300028814|Ga0307302_10466479 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 626 | Open in IMG/M |
| 3300029980|Ga0302298_10004348 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3442 | Open in IMG/M |
| 3300030491|Ga0302211_10008820 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2827 | Open in IMG/M |
| 3300031713|Ga0318496_10292493 | Not Available | 899 | Open in IMG/M |
| 3300031720|Ga0307469_11030716 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 770 | Open in IMG/M |
| 3300031740|Ga0307468_100994601 | Not Available | 737 | Open in IMG/M |
| 3300031765|Ga0318554_10659269 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 588 | Open in IMG/M |
| 3300031854|Ga0310904_11043802 | Not Available | 584 | Open in IMG/M |
| 3300031879|Ga0306919_11466639 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 514 | Open in IMG/M |
| 3300032039|Ga0318559_10541798 | Not Available | 543 | Open in IMG/M |
| 3300032089|Ga0318525_10032141 | All Organisms → cellular organisms → Bacteria | 2561 | Open in IMG/M |
| 3300033550|Ga0247829_10545263 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 962 | Open in IMG/M |
| 3300033551|Ga0247830_11272857 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 588 | Open in IMG/M |
| 3300033551|Ga0247830_11391356 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 561 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 21.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 5.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 4.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 4.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 4.00% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 3.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.00% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.00% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 2.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 2.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.00% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.00% |
| Wetland | Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland | 1.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.00% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.00% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 1.00% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.00% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000891 | Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001213 | Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly) | Environmental | Open in IMG/M |
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300004013 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005162 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAB | Environmental | Open in IMG/M |
| 3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
| 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
| 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
| 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
| 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
| 3300006581 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300011107 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012505 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610 | Host-Associated | Open in IMG/M |
| 3300012882 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 | Environmental | Open in IMG/M |
| 3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
| 3300012901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1 | Environmental | Open in IMG/M |
| 3300012914 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2 | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014266 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1 | Environmental | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
| 3300016422 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 | Environmental | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
| 3300017965 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T | Environmental | Open in IMG/M |
| 3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
| 3300020005 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2 | Environmental | Open in IMG/M |
| 3300020020 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1 | Environmental | Open in IMG/M |
| 3300022883 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4 | Environmental | Open in IMG/M |
| 3300022886 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5 | Environmental | Open in IMG/M |
| 3300022899 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6 | Environmental | Open in IMG/M |
| 3300022915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4 | Environmental | Open in IMG/M |
| 3300025792 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025947 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028754 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157 | Environmental | Open in IMG/M |
| 3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
| 3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
| 3300029980 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3 | Environmental | Open in IMG/M |
| 3300030491 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_3 | Environmental | Open in IMG/M |
| 3300031713 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031765 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22 | Environmental | Open in IMG/M |
| 3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
| 3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
| 3300032039 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21 | Environmental | Open in IMG/M |
| 3300032089 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23 | Environmental | Open in IMG/M |
| 3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
| 3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI10214J12806_108622731 | 3300000891 | Soil | MIRRITGIILGVLAFLLVYWITGLGTPSQPNWALAALIGLVIALIWPW |
| JGI1027J12803_1054808951 | 3300000955 | Soil | MIRRITGIILGVLAFLIVYWLSGLGTPSNPNLALAILVGLVVALIW |
| JGIcombinedJ13530_1029576911 | 3300001213 | Wetland | MIRRITGIILGVVAFLIVFWLTGGLATPATPNWALAILVGLVVALIWPWI |
| C688J35102_1183571492 | 3300002568 | Soil | MIRRITGIVIGVLAFLLVYWITGLGNPSNPNLALAALIGLVVALIWPWLFGI |
| Ga0055465_100604731 | 3300004013 | Natural And Restored Wetlands | MIRRITGIILGVLAFLLVYWLSGGMATPSTPNWALAILVGLVVALIW |
| Ga0062593_1032356351 | 3300004114 | Soil | MIRRITGIILGVLAFLLVYWATGLGTPSQPNLALAALVGLVVALIWPWIMGLIVVRR |
| Ga0062594_1023411792 | 3300005093 | Soil | MIRRITGIVLGVLAFLLVYWITGLGTPSQPNWALAALVGLVIALIWPWLFGIYAVRRVRQNRQN |
| Ga0066814_100869212 | 3300005162 | Soil | MIRRITGIVLGVVAFFIVYWLTGGLATPSTPNWALAILVGLVVALIWPWI |
| Ga0066809_101669812 | 3300005168 | Soil | MIRRITGIIIGVLAFLLVYWLTGLGNPSNPNLALAALIGLVVALIWPWLFGLYMV |
| Ga0068869_1017902072 | 3300005334 | Miscanthus Rhizosphere | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVALIWPWIFGLIMVRRVRQNRQAE |
| Ga0070687_1008903152 | 3300005343 | Switchgrass Rhizosphere | MIRRITGIVLGVVAFFIVYWLTGGFATPATPNWALAILVGLVVALIWPWIFGLIV |
| Ga0070662_1014019351 | 3300005457 | Corn Rhizosphere | MIRRITGIIIGVLAFFLVYWLTGLGTPSNPNWALAALVGLVVALLWP |
| Ga0070699_1014954312 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MIRRITGIILGVVAFLIVYWLTGGLATPSNPNWALAILVGLVVALIWPWIMGLIIVRRAR |
| Ga0070684_1004538071 | 3300005535 | Corn Rhizosphere | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVALIWPWIFGLIMVR |
| Ga0068853_1008411832 | 3300005539 | Corn Rhizosphere | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVALI |
| Ga0068854_1011181261 | 3300005578 | Corn Rhizosphere | MIRRITGIILGVVAFLIVFWLTGGFATPATPNWALAIL |
| Ga0068859_1011455661 | 3300005617 | Switchgrass Rhizosphere | MIRRISGIVLGVIAFLLVYWLSGLGTPSNPNLALSLLVGLVVALISPWIIGLLLVRRVRQRRQDEIDR |
| Ga0068871_1016690482 | 3300006358 | Miscanthus Rhizosphere | MIRRITGIILGVVAFLIVYWLTGGLATPSNPNWALAILVGLVVALIWPWIMGLIIV |
| Ga0068871_1018665402 | 3300006358 | Miscanthus Rhizosphere | MIRRITGIVLGVLAFLLVYWITGLGTPSQPNWALAALVGLVIALIWPWLFGIYAVRRV |
| Ga0074048_125500182 | 3300006581 | Soil | MIRRITGIILGVLVFFLVYWITGLGTPSNPNWALAALIGLVVALI* |
| Ga0079220_111785072 | 3300006806 | Agricultural Soil | MIRRITGIVLGVVAFFIVYWLTGGFATPATPNWALAILVGLVVALIWPWIFGLIVVRR |
| Ga0068865_1010275541 | 3300006881 | Miscanthus Rhizosphere | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVALIWPWIFGLIMVRRV |
| Ga0105245_115149731 | 3300009098 | Miscanthus Rhizosphere | MIRRITGIIIGVLAFFLVYWLTGLGTPSNPNWALAALVGLVVALIWPWLFGLFMVRRVRQIDAGDA* |
| Ga0111538_130928621 | 3300009156 | Populus Rhizosphere | MIRRITGIIIGVLVFFLVYWITGLGTPSNPNWALAALIGLIVAIL |
| Ga0127503_101280372 | 3300010154 | Soil | VLAFLLVYWVTGLGTPSEPNWALAILVGLVIALIWPWLFGLYAVRRVRQNRQNEIDQE |
| Ga0134127_104418491 | 3300010399 | Terrestrial Soil | MEGSHMIRRITGIILGVVAFLIVFWLTGGFATPATPNWALAILVGLVV |
| Ga0134122_106977962 | 3300010400 | Terrestrial Soil | MIRRITGIVLGVLAFLLVYWLTSVTSTPSSPNWALAILVGLVVALIWPWLFGLY |
| Ga0151490_15502151 | 3300011107 | Soil | MIRRITGIVLGVLAFLLVYWLTSATSTPSSPNWALSLLV |
| Ga0105246_111601851 | 3300011119 | Miscanthus Rhizosphere | MIRRISGIVLGVIAFLLVYWLSGLGTPSNPNLALSLLVGLVVALISPWIIGLLLVRRVRQRRQDE |
| Ga0137376_110889392 | 3300012208 | Vadose Zone Soil | MEGLVTMIRRITGIVLGVLAFFLVYWATGLGTPSNPNWALSILVGLVVALLW |
| Ga0157339_10530841 | 3300012505 | Arabidopsis Rhizosphere | MIRRITGIVLGVVAFLIVYWLTGGTATPSTPNWALAILVGLVVALI |
| Ga0157304_11039122 | 3300012882 | Soil | MIRRITGIIIGVLAFLLVYWLSGGFATPSTPNWALSILVGLVVALIWPWLFGLM |
| Ga0157285_102203471 | 3300012897 | Soil | MIRRITGIIIGVLVFFLVYWITGLGTPSNPNWALAALIGLVVALL |
| Ga0157288_101277171 | 3300012901 | Soil | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVALIWPWIFG |
| Ga0157297_105204772 | 3300012914 | Soil | MIRRITGIIIGVLVFFLVYWITGLGTPSNPNWALAALIGLVVALLWPWLFGLYMVRRVK |
| Ga0164298_102833753 | 3300012955 | Soil | MIRRITGIVLGVLAFLLVYWLSGLGTPSNPNLALALLVGLVVALVWPWLFGLYMVRRVRQNRQ |
| Ga0164298_104483031 | 3300012955 | Soil | MIRRITGIIIGVLAFFLVYWLTGLGTPSNPNWALAALVGLVVALLWPWLFGLMMVRR |
| Ga0164298_108253512 | 3300012955 | Soil | MIRRITGIIIGVLVFFLVYWITGLGTPSNPNWALAALIGLVVAL |
| Ga0164299_113895332 | 3300012958 | Soil | MIRRITGIVLGVLAFLLVYWLTSATSTPSSPNWALS |
| Ga0164302_105801701 | 3300012961 | Soil | MIRRITGIILGVLAFLLVYWLSGLGTPSNPNLALALLVGLVV |
| Ga0126369_104788483 | 3300012971 | Tropical Forest Soil | MIRRITGIILGVLAFFLVYWITGLGTPSQPNWALAALVGLVIALIWPWVFGLIAVRRVRQ |
| Ga0164308_100248635 | 3300012985 | Soil | MIRRITGIIIGVLAFFLVYWLTGLGTPSNPNWALAALVGLVVALLWPWLFGL |
| Ga0157375_131252621 | 3300013308 | Miscanthus Rhizosphere | MIRRITGIILGVVAFLIVYWLTGGVATPATPNWALAILVGLV |
| Ga0075359_11364551 | 3300014266 | Natural And Restored Wetlands | MIRRITGIILGVVAFLIVYWLSGGLATPATPNWALAILVGLVVALIWPWVM |
| Ga0163163_100265271 | 3300014325 | Switchgrass Rhizosphere | MIRRITGIVLGVVAFFIVYWLTGGFATPATPNWALAILVGL |
| Ga0157380_116005052 | 3300014326 | Switchgrass Rhizosphere | MIRRITGIIIGVIAFFLVYWLTGLGTPSQPNWALAALIGL |
| Ga0173483_102454232 | 3300015077 | Soil | MIRRITGIILGVLAFLLVYWFTGLGTPSQPNWALAALIGLVVALIWPWLFGLYAVRR |
| Ga0173480_101988551 | 3300015200 | Soil | MIRRITGIIIGVLVFFLVYWITGLGTPSNPNWALAALIGLVVALIWPWLFGLMMVRRVRQNRQA |
| Ga0173480_108720561 | 3300015200 | Soil | MIRRITGIILGVLVFFLVYWITGLGTPSNPNWALAALIGLVVALLWPWV |
| Ga0132258_117572751 | 3300015371 | Arabidopsis Rhizosphere | MIRRITGIILGVVAFLIVYWLTGGLATPSNPNWALAILVGLVVALIWPWIMGLIIVRRA |
| Ga0132256_1011043191 | 3300015372 | Arabidopsis Rhizosphere | MIRRITGIVLGVVAFFIVYWLTGGFATPATPNWALAILVG |
| Ga0132257_1043772051 | 3300015373 | Arabidopsis Rhizosphere | MIRRISGIVLGVIAFLLVYWLSGLGTPSNPNLALSLLVGLVVALISPWIIGLLL |
| Ga0132255_1013018883 | 3300015374 | Arabidopsis Rhizosphere | MIRRITGIVLGVVAFFIVYWLTGGFATPATPNWALAILVGLVVALIWPWIM |
| Ga0132255_1056432111 | 3300015374 | Arabidopsis Rhizosphere | MIRRITGIILGVVAFLIVFWLPGGLATPATPNWALALLVGLVVALIWPWIMGLIIVRRA |
| Ga0132255_1058006031 | 3300015374 | Arabidopsis Rhizosphere | MIRRITGIVLGVLAFLLVYWLTGLGTPSNPNLALAALVGLVVALLWPWLFGLY |
| Ga0182036_116983952 | 3300016270 | Soil | MIRRITGIVLGVGAFLIVYWLTGGFATPATPNWALAILVGLVVALIWPWIMGILLV |
| Ga0182039_110989721 | 3300016422 | Soil | MIRRIVGIVLGVVAFFIVYWITGLGTPSQPNWALAALIGLVIALIWPWV |
| Ga0163161_114410541 | 3300017792 | Switchgrass Rhizosphere | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVALIWPWIFGLIMVRRVRQNRQAEI |
| Ga0187779_101835612 | 3300017959 | Tropical Peatland | MIRRITGIVLGVVAFFIVYWLTGGFATPATPNWALSILVGLVVALIWPWIMGLLLVRR |
| Ga0190266_101979521 | 3300017965 | Soil | MIRRITGIILGVLAFFLVYWLSGGMATPSTPNWALAILVGLVVALI |
| Ga0184629_104047502 | 3300018084 | Groundwater Sediment | MIRRITGIILGVVAFLIVYWVSGLGTPSTPNLALAILVGLVVALIWP |
| Ga0190274_111897031 | 3300018476 | Soil | MIRRITGIIIGVIAFLLVYWITGLGTPSNPNLALAALIGLVVALIWPWLFGLFMVRRVRQNR |
| Ga0173482_104468351 | 3300019361 | Soil | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVALIWPWVFGLVMVRRVRQNRQ |
| Ga0193697_10650911 | 3300020005 | Soil | MIRRITGIIIGVLAFFLVYWLTGLGTPSNPNWALAALVGLVVALIWPWLFGLFMVRRVRQNR |
| Ga0193738_11323682 | 3300020020 | Soil | MIRRITGIALGVLAFLLVYALSGGMATPSNPNWALSLL |
| Ga0247786_10533291 | 3300022883 | Soil | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVALIWPWVFGLI |
| Ga0247746_11343982 | 3300022886 | Soil | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLV |
| Ga0247795_10839442 | 3300022899 | Soil | MIRRISGIVLGVIAFLLVYWLSGLGTPSNPNLALSLLVGLVVALISPWIIGLLLVRR |
| Ga0247790_101445101 | 3300022915 | Soil | MIRRISGIVLGVIAFLLVYWLSGLGTPSNPNLALSLLVGLVVALISPWIIGLL |
| Ga0210143_10442001 | 3300025792 | Natural And Restored Wetlands | MIRRITGIILGVVAFLIVYWLTGGLATPATPNWALAILVGLVVALIWPW |
| Ga0207644_108864091 | 3300025931 | Switchgrass Rhizosphere | MIRRITGIILGVLAFLLVYWLSGLGTPSNPNLALALLV |
| Ga0207706_112448452 | 3300025933 | Corn Rhizosphere | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVALIWPWI |
| Ga0207686_108296502 | 3300025934 | Miscanthus Rhizosphere | MIRRITGIILGVVAFLIVYWLTGGVATPATPNWALAILVGLVVALIWPWVMGLIVVRR |
| Ga0207669_114996341 | 3300025937 | Miscanthus Rhizosphere | MIRRITGIVLGVVAFLLVYWATGLGTPSNPNLALALLVGLVVALIWPWL |
| Ga0207704_119587131 | 3300025938 | Miscanthus Rhizosphere | MIRRITGIVLGVVAFLLVYWATGLGTPSNPNLALALL |
| Ga0207711_101545731 | 3300025941 | Switchgrass Rhizosphere | IVLGVLAFLLVYWLSGLGTPSNPNLALALLVGLVVALLWPWLGLTK |
| Ga0207679_105672654 | 3300025945 | Corn Rhizosphere | MIRRITGIVLGVVAFFIVYWLTGGFATPATPNWALA |
| Ga0210067_10194412 | 3300025947 | Natural And Restored Wetlands | MIRRITGIILGVLAFVLVYWITGLGTPSEPNWALAALIGLVVALIWPWIFGLYAVRRVRQKRQND |
| Ga0207668_104031853 | 3300025972 | Switchgrass Rhizosphere | MIRRITGIVLGVLAFLLVYWLTGLGTPSEPNWALALLVGLVVALIWPWI |
| Ga0207658_121975691 | 3300025986 | Switchgrass Rhizosphere | MIRRITGIVLGVLAFLLVYWLTSVTSTPSSPNWALAILVGLVVALIWPWLFGLYMVR |
| Ga0207676_108925572 | 3300026095 | Switchgrass Rhizosphere | MIRRITGIILGVLVFFVVYWITGLGTPSNPNWALAALIGLVVA |
| Ga0207675_1007691141 | 3300026118 | Switchgrass Rhizosphere | MIRRITGIVLGVLAFLLVYWLTGLGTPSNPNLALALLVGLVVALLWPWVFGLFMVRRVRQNRQNENFVSLPIWTPTR |
| Ga0207675_1012766771 | 3300026118 | Switchgrass Rhizosphere | MIRRITGIILGVVAFLIVFWLTGGFATPATPNWALAILVGLVVALIWPWVMGLIVVR |
| Ga0207428_103746231 | 3300027907 | Populus Rhizosphere | MIRRISGIVLGVIAFLLVYWLSGLGTPSNPNLALSL |
| Ga0307297_101330562 | 3300028754 | Soil | MEDSRMIRRITGIIIGVLVFFLVYWITGLGTPSNPNWALAALIGLVVAILWPWVFGLIMVRRVRANR |
| Ga0307503_107771711 | 3300028802 | Soil | MIRRITGIVLGVLAFLLVYWLSGLGTPSNPNLALALLVGLVVALLW |
| Ga0307302_104664792 | 3300028814 | Soil | MIRRITGIIIGVLVFFLVYWITGVGTPSNPNWALAALIGLV |
| Ga0302298_100043484 | 3300029980 | Fen | MIRRITGIILGVVAFLIVYWLTGGTATPATPNWALAILVG |
| Ga0302211_100088204 | 3300030491 | Fen | MIRRITGIILGVVAFLIVYWLTGGTATPATPNWALAILVGLVVA |
| Ga0318496_102924931 | 3300031713 | Soil | MIRRITGIVLGVGAFLIVYWLTGGFATPATPNWALAILVGLVVALIWPW |
| Ga0307469_110307162 | 3300031720 | Hardwood Forest Soil | MIRRISGIILGVLAFLLVYWFTGLGTPSQPNWALAALIGLVVALIWPW |
| Ga0307468_1009946012 | 3300031740 | Hardwood Forest Soil | MIRRITGIILGVVAFLIVYWLTGGLATPATPNWALAILVGLLVALIWPWVMGLIVVRRAR |
| Ga0318554_106592692 | 3300031765 | Soil | MIRRIVGIVLGVVAFFIVYWITGLGTPSQPNWALAALIGLVIALIWPWVFGIWAVRRVRQRRQD |
| Ga0310904_110438022 | 3300031854 | Soil | MIRRITGIILGVVAFLLVYWLTGGFATPATPNWALAILVG |
| Ga0306919_114666392 | 3300031879 | Soil | MIRRIVGIVLGVVAFFIVYWITGLGTPSQPNWALAALIGLVIALIWPWVFGIWAVRRV |
| Ga0318559_105417981 | 3300032039 | Soil | MIRRITGIVLGVGAFLIVYWLTGGFATPATPNWALAILVGLVVALIWPWIMGILL |
| Ga0318525_100321411 | 3300032089 | Soil | MIRRIVGIVLGVVAFFIVYWITGLGTPSQPNWALAALIGLVIALIWPW |
| Ga0247829_105452632 | 3300033550 | Soil | MIRRISGIVLGVIAFLLVYWLSGLGTPSNPNLALSLL |
| Ga0247830_112728572 | 3300033551 | Soil | MIRRITGIVLGVLAFLLVYWLTGLGTPSQPNLALAALIGLVVALL |
| Ga0247830_113913561 | 3300033551 | Soil | MIRRISGIVLGVIAFLLVYWLSGLGTPSNPNLALSLLVGLVVALISPWIIGLLLVRRVRQRRQDEI |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |