Basic Information | |
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Family ID | F105266 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 100 |
Average Sequence Length | 65 residues |
Representative Sequence | LMLGAAAAITGTALLVYANRPECTTNQLAGGCGYGTKVVGGAVLSGGVVGLVIGALTWR |
Number of Associated Samples | 92 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 85 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.53 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (8.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (42.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (46.000 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 47.13% β-sheet: 0.00% Coil/Unstructured: 52.87% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.53 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 100 Family Scaffolds |
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PF00575 | S1 | 4.00 |
PF00082 | Peptidase_S8 | 3.00 |
PF06580 | His_kinase | 2.00 |
PF01027 | Bax1-I | 2.00 |
PF04020 | Phage_holin_4_2 | 1.00 |
PF00083 | Sugar_tr | 1.00 |
PF00753 | Lactamase_B | 1.00 |
PF02687 | FtsX | 1.00 |
PF12704 | MacB_PCD | 1.00 |
PF04519 | Bactofilin | 1.00 |
PF00210 | Ferritin | 1.00 |
PF00691 | OmpA | 1.00 |
PF12543 | DUF3738 | 1.00 |
PF02630 | SCO1-SenC | 1.00 |
PF12779 | WXXGXW | 1.00 |
PF08308 | PEGA | 1.00 |
PF07705 | CARDB | 1.00 |
PF03060 | NMO | 1.00 |
PF08239 | SH3_3 | 1.00 |
PF01979 | Amidohydro_1 | 1.00 |
PF00873 | ACR_tran | 1.00 |
PF00106 | adh_short | 1.00 |
COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
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COG2972 | Sensor histidine kinase YesM | Signal transduction mechanisms [T] | 2.00 |
COG3275 | Sensor histidine kinase, LytS/YehU family | Signal transduction mechanisms [T] | 2.00 |
COG0516 | IMP dehydrogenase/GMP reductase | Nucleotide transport and metabolism [F] | 1.00 |
COG1225 | Peroxiredoxin | Posttranslational modification, protein turnover, chaperones [O] | 1.00 |
COG1664 | Cytoskeletal protein CcmA, bactofilin family | Cytoskeleton [Z] | 1.00 |
COG1950 | Uncharacterized membrane protein YvlD, DUF360 family | Function unknown [S] | 1.00 |
COG1999 | Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family | Posttranslational modification, protein turnover, chaperones [O] | 1.00 |
COG2070 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family | General function prediction only [R] | 1.00 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 100.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 8.00% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 7.00% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 6.00% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 5.00% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 5.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 5.00% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 4.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.00% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 4.00% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 4.00% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 4.00% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 4.00% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 3.00% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.00% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.00% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.00% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.00% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 2.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.00% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.00% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.00% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.00% |
Watersheds | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds | 1.00% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 1.00% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 1.00% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil | 1.00% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 1.00% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 1.00% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.00% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 1.00% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.00% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.00% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.00% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 1.00% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.00% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.00% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2065487018 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
2140918008 | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all | Environmental | Open in IMG/M |
2170459003 | Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm | Environmental | Open in IMG/M |
2170459009 | Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005534 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005553 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 | Environmental | Open in IMG/M |
3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006800 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 | Environmental | Open in IMG/M |
3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009812 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
3300011444 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2 | Environmental | Open in IMG/M |
3300012357 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG | Environmental | Open in IMG/M |
3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300014157 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300021858 | Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022522 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022533 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300027915 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes) | Environmental | Open in IMG/M |
3300027986 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300030743 | Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly | Environmental | Open in IMG/M |
3300030904 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031668 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032051 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
3300033486 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A | Environmental | Open in IMG/M |
3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
3300034129 | Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
GPINP_00413930 | 2065487018 | Soil | MAAMLIGAVASITGGALLIYANRPECNVNQFAGGCGYGTKVIGGAVLTGGLASLVVGALTWR |
Bog_all_C_00841450 | 2140918008 | Soil | MGRDGSIAAIMIGAVATITGAAILVYANRPDCNTNQFAGGCGYGTKVIGGAVLSGGIVGLVVGALTWR |
E4A_11411750 | 2170459003 | Grass Soil | MGRSRSIAALTLGTIAAITGGAILVYANRPECSSTNQSAGGCGYGTKVIGGAVLTGGVAGLVIGALTWQ |
F47_09419240 | 2170459009 | Grass Soil | RGGFRRGRSRNSGQVAAIFLGAVGAIAGAAVLVYANRPECNAQPALGGCGYGTKVAGGAVLSAGLVGMTIGALTWR |
Ga0062590_1029372901 | 3300004157 | Soil | YHVRHDGSIAALMIGAAAAITGTAVLVYANRPECTFAPYAGGCGYGTKVVGGAVLAGGVVGLFVGALTW* |
Ga0070670_1015502411 | 3300005331 | Switchgrass Rhizosphere | AGSLAQRRGYRGRGSGRNDGARAAIFLGAVGVIAGTAVMVYANRPECSVSARANGCGYGTKVAGSAVLSAGLVGLLVGALTWR* |
Ga0068869_1005972712 | 3300005334 | Miscanthus Rhizosphere | GHSGSAAAMVLGAGAAIAGAAVLVYANRPDCRPSQTTNGCGYGTKVIGGAVLSAGVVGLVAGALTW* |
Ga0070666_114442221 | 3300005335 | Switchgrass Rhizosphere | GAIAGTGVLIYANRPECNVNSNLGGCGYGTRVVGGSVLAGGLVGLMVGAVMWR* |
Ga0068868_1004696951 | 3300005338 | Miscanthus Rhizosphere | AALTAIMLGAVGAIAGTAVLVYANRPDCNVNPNLGGCGYGTRVVGASVLSGGIVGLMVGAVMWR* |
Ga0070711_1006116801 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | SIAALMLGSIAAIAGTAVLVYANRPECTTNQFAGGCGYGTKVVGGAVLSGGVVGLVIGALTWR* |
Ga0070694_1008859592 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | SAAAMVLGAGAAIAGAAVLVYANRPDCRPSQTTNGCGYGTKVIGGAVLSAGVVGLVAGALTW* |
Ga0070735_101878394 | 3300005534 | Surface Soil | FLGAAGAIAGTATLLYANRPECGFSPNAGGCGYGTKVVGGSVLAAGVVGLVVGAALWR* |
Ga0070735_104009463 | 3300005534 | Surface Soil | GGYRGEHDGAAAAIIIGAAAVIAGSAILVYANRPDCSVNQLAGGCGYGTKVVGGAVLSAGIVGVLVGAATWR* |
Ga0070695_1013956922 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MVLGAGAAIAGAAVLVYANRPDCRPSQTTNGCGYGTKVIGGAVLSAGVVGLVAGALTW* |
Ga0070696_1012721472 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | ADSLALGRRYGRWRGRNGAATAAVVLGAAASITGAALLVYANRPECRANDLASGCGYGTKVVGGAVLSGGLVSLVVGAVTWRR* |
Ga0070665_1020829381 | 3300005548 | Switchgrass Rhizosphere | GAVASITGAAILVYANRPECRSRPSATGCGYGTKVVGGAVLSGGVVGLTIGALTWR* |
Ga0066695_107819961 | 3300005553 | Soil | LGAIGTIAGAAVLVYAGRPECSANPNLGGCGYGTKVVGGAVLTAGLVGLMVGALTWR* |
Ga0066706_114762121 | 3300005598 | Soil | GGRNDGAATALFLGAVGTIAGAAILVYANRPECSVNAREGGCGYGTKVVGGAVLSAGLVGLMVGAVTWR* |
Ga0068856_1022144561 | 3300005614 | Corn Rhizosphere | ASIAGAAVLVYANRPECSTNQAASGCGYGTKVVGGAVLSTGIVGLVVGAVTWR* |
Ga0068859_1022292161 | 3300005617 | Switchgrass Rhizosphere | DDAGSLAQRRGYRGRGSGRNDGARAAIFLGAVGVIAGTAVMVYANRPECSVSPRANGCGYGTKVAGSAVLSAGLVGLLVGALTWR* |
Ga0066903_1001882771 | 3300005764 | Tropical Forest Soil | NGSIAALLIGTAATITGAAILIYANRPECSTNQFAGACGYGTKVIGGSVLTGGVVGLMVGALTWK* |
Ga0066903_1075607912 | 3300005764 | Tropical Forest Soil | SAATITGTALLFYANRPECGVEPRAGGCGYGAKVIGGSVLTGGVASLLVGALTWR* |
Ga0068863_1011275442 | 3300005841 | Switchgrass Rhizosphere | AAILVYANRPECSTNPYRADGCGYGTKVVGGAALGLGVMGFTIAAITW* |
Ga0068858_1022560912 | 3300005842 | Switchgrass Rhizosphere | RPRGGGSGGNRDAAAAAIAVGAVATIVGAAILVYGNRPECTTNQRAGGCGYGTHVIGGAVLSAGVVGLVIGSLTW* |
Ga0068862_1012589232 | 3300005844 | Switchgrass Rhizosphere | RGYRGRGSGRNDVARASILLGAVATITGTAVLVYANRPECSVNARETGCGYGTKVAGGAVLSAGLVGLLVGALTWR* |
Ga0070717_116775562 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | LVYANRPECSVSANNDLCGYGTKVVGGTLISAGLVSLLVGAVTWR* |
Ga0066652_1008290771 | 3300006046 | Soil | ANRPDCSTNPNLGGCGYGTKVVGGAVLTAGLVGILTGALLWR* |
Ga0068871_1022274111 | 3300006358 | Miscanthus Rhizosphere | SVTGAAILVYANRPECSTNPYRADGCGYGTKVVGGAALGLGVMGFTIAAITW* |
Ga0066660_113371061 | 3300006800 | Soil | ASAGQVYPGRPYRMRRDGSIAAIMIGAAAAITGTAVLVYANRPERATNQFAGGCGYGTKVIGTSVLAGGIVGLFVGALTRQ* |
Ga0075426_102521282 | 3300006903 | Populus Rhizosphere | QYGRRGFGRRRNGAAAALIALGAVASITGGAVLVYANRPECSTNQFAGGCGYGTKVVGGAVLSAGIVGMVAGALAWR* |
Ga0105240_107785791 | 3300009093 | Corn Rhizosphere | ASIAGAAILVYANRPDCGPHPDAGGCGYGTKVVGGAVLSVGVVSMLVGALTYR* |
Ga0105242_111628453 | 3300009176 | Miscanthus Rhizosphere | SITGTAILVYAHRPDCRYHEFASGCGYGTKVVGGAVVAGGVVGLVVGALTW* |
Ga0105238_111146761 | 3300009551 | Corn Rhizosphere | LLVQLRDIQLADQVLRGRGRRDNDGARAAIILGAVATIAGTAVLVYANRPDCSTNPTAGGCGYGTKVVGGALLTAGVVSLLVGALTWR* |
Ga0105249_130631752 | 3300009553 | Switchgrass Rhizosphere | GQIIQGQPYPYPYPPAYHVRHDGSIAALMIGAAAAITGTAVLVYANRPECTFAPYAGGCGYGTKVVGGAVLAGGVVGLFVGALTW* |
Ga0105067_10862242 | 3300009812 | Groundwater Sand | GGRNRAAQAEIIVGAIGSITGGALLVYANRPECRANQLASGCGYGTKVIGGAVLAAGVVGLVVGALTWR* |
Ga0126376_107482052 | 3300010359 | Tropical Forest Soil | MFVGAAAAIVGTALLVYANRPECNIAPTAGGCGYGAKVVGGAVLSGGIAGLAIGALTWR* |
Ga0136449_1038085101 | 3300010379 | Peatlands Soil | RPYIIGRDRSIAAIMIGAVASITGAAVLVYANRPDCDTNQFAGGCGYGTKVVGGAVLSGGLVSLIVGALTWR* |
Ga0105246_107347542 | 3300011119 | Miscanthus Rhizosphere | MVLGAGAAIAGAAVLVYANRPECRPSQTTNGCGYGTKVIGGAVLSAGVVGLV |
Ga0150983_143779023 | 3300011120 | Forest Soil | SIAAIMIGATAAIAGAALLVYANRPECVTDTVAGGCGYGTKVAGTAFLSGGIVGLLVGALTWR* |
Ga0137393_101304322 | 3300011271 | Vadose Zone Soil | VAALMIGAVATITGAAILVYAHRPECETQQFAGGCGYGTRVIGGAVLSGGIAGLFVGALTWR* |
Ga0137463_13343771 | 3300011444 | Soil | GYRGRGRGGRNGASTAIVLGAVASIAGAAVLVYANRPECSTNHSASGCGYGTKVVGGAVLSAGIVGLVAGSLTWR* |
Ga0137384_112129212 | 3300012357 | Vadose Zone Soil | MGRSGSITALLIGAAAAITGAAVLVYANRPECSTNQFAGGCGYGTKVIGGAVLAGGAVGLVIGAVTWR* |
Ga0137358_110650241 | 3300012582 | Vadose Zone Soil | AFGQWGGSRRGRGRNSGAATAIFLGAAGTIAGAAVLVYANRPECSGNPTLGGCGYGTKVVGGAVLSAGLVGLMIGALTWR* |
Ga0137394_113682322 | 3300012922 | Vadose Zone Soil | MIGAAAAITGAAILVYANRPECSTNQFAGGCGYGTKVIGGAVLSGGAVGLVIGAVTWR* |
Ga0137407_111988091 | 3300012930 | Vadose Zone Soil | GAIASITGAAILVYANRPECSAHQFANGCGYGTKVVGGAVLSGGIVGLVVGALTWR* |
Ga0126375_110475551 | 3300012948 | Tropical Forest Soil | IGAAAAIAGTALLVYANRPECSAIPTAGGCGYGSKVLGGAVLSAGVVGVTVGALTWR* |
Ga0164301_105556421 | 3300012960 | Soil | RGRNGGAQAAVILGAVASIAGAALLAYANRPECSANQRADGCGYGTKVIGGAVLGGGLVSLAVGALTWR* |
Ga0126369_114704281 | 3300012971 | Tropical Forest Soil | YPYPYPAYPSHHHHDGSIAAIMIGAAAAITGTAVLVYANRPECTFAPYAGGCGYGTKVVGGAVLAGGVVGLFVGALTW* |
Ga0164305_105581312 | 3300012989 | Soil | MFVGAAAAIAGTAVLVYANRPECSTLPSASGCGYGTKVVGGAVLSAGVVGLLVGALTWR* |
Ga0157374_110328803 | 3300013296 | Miscanthus Rhizosphere | VIAGTAVLVYANRPECRLNDRANGCGYGTKVAGSAVLSAGIVGLLVGALTWR* |
Ga0157378_107678342 | 3300013297 | Miscanthus Rhizosphere | QGQPYPYPYPPAYHVRHDGSIAALMIGAAAAITGTAVLVYANRPECTFAPYAGGCGYGTKVVGGAVLAGGVVGLFVGALTW* |
Ga0157378_125011831 | 3300013297 | Miscanthus Rhizosphere | ITGAAILVYANRPDCRYREFATGCGYGTKVVGGALLSGGAVGLTIGALTWR* |
Ga0163162_116128882 | 3300013306 | Switchgrass Rhizosphere | VLNDRGAPLPGEAGSLAQRRGYGRRGGRNDAARAEILLGAVAAIAGAAVLVYANRPECNTDPGANGCGYGTKVAGSAVLSAGLVGLLGGPLTWR* |
Ga0134078_103588302 | 3300014157 | Grasslands Soil | LACGKRVCSRRSRRDGSVAALIIGSAAVIAGTAVLVYANRPECSTSQVAGGCGYGTKVIGTSVLAGGAVSLFVGALTW* |
Ga0163163_105319222 | 3300014325 | Switchgrass Rhizosphere | PYPYPYPPAYHVRHDGSIAALMIGAAAAITGTAVLVYANRPECTFAPYAGGCGYGTKVVGGAVLAGGVVGLFVGALTW* |
Ga0132256_1034151961 | 3300015372 | Arabidopsis Rhizosphere | DGSIAALMIGAAAAITGTAVLVYANRPECTFAPYAGGCGYGTKVVGGAVLAGGVVGLFVGALTW* |
Ga0182041_110609332 | 3300016294 | Soil | PMLGAPVESRAAFGQWGRGYRRGRGRNAGAATAIFLGAAGTIAGTALLVYAGRPECGGNPELGGCGYGTKVLGGAVLSAGLVGVMVGALTWR |
Ga0182037_118566781 | 3300016404 | Soil | MTAIVLGAIASIAGAAILVYANRPDCSTNQMASGYGYGTKVAGGAVLSAGAVGLVIGAVTWP |
Ga0187779_107711402 | 3300017959 | Tropical Peatland | DNRDGSMAAMILGAAAAITGASLLFYANRPECDARPYAGGCGYGTKVIGGAVLTGGLVSVTIGALTW |
Ga0066669_109382431 | 3300018482 | Grasslands Soil | GAVGTVAGAAVLVYANRPDCSTNPNLGGCGYGTKVVGGAVLTAGLVGILTGALLWR |
Ga0066669_120367592 | 3300018482 | Grasslands Soil | VKRPAGAAATITGAAILVYANRPDCSVNRTLNGCGYGTKVVGGAVLSAGAVGMVAGAIAW |
Ga0210408_104452442 | 3300021178 | Soil | TAIVLGAVGTIAGAAVLVYANRPECNANPALGGCGYGTKVIGGAVLSAGLVGLTIGALTW |
Ga0210408_110621482 | 3300021178 | Soil | DAARGEIIFGAVASIAGAAVLVYANRPECSTNQMASGCGYGTKVIGGAVLSAGLVTLLIGAVTWR |
Ga0210410_104460741 | 3300021479 | Soil | AIMVGSVVAIAGAAILVYANRPECDVHQFAGGCGYGTKVVGGAVLSGGLVSLIVGALTWR |
Ga0126371_129483862 | 3300021560 | Tropical Forest Soil | SIAAIAGGALLVYANRPECSVDHLAGGCSYGTKVAGGAVLAGGVLGITVGALTWR |
Ga0126371_133639341 | 3300021560 | Tropical Forest Soil | AAFGQWGRGYRRGRGRNAGAATAIFLGAAGTIAGTALLVYAGRPECGGNPELGGCGYGTKVLGGAVLSAGLVGVMVGALTWR |
Ga0213852_14076692 | 3300021858 | Watersheds | AIMIGAAAAITGGALLVYANRPECATRQFAGGCGYGTKVVGGAVLSGGVAGLFVGALTWR |
Ga0242659_11068602 | 3300022522 | Soil | VGSIVSIAGAAILVYANRPECHTHQFAGGCGYGTKVVGGAVLSGGIVSLVVGALTWR |
Ga0242662_103348242 | 3300022533 | Soil | MSHDGSLAAIMIGAAAAITGGALLVYANRPECATRQFAGGCGYGTKVVGGAVLSGGIASLFVAALTWR |
Ga0207692_111925362 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | LMLGAAAAITGTALLVYANRPECTTNQLAGGCGYGTKVVGGAVLSGGVVGLVIGALTWR |
Ga0207654_109447561 | 3300025911 | Corn Rhizosphere | NQAALTAIMLGAVGAIAGTAVLVYANRPDCNVNPNLGGCGYGTKVVGASVLTGGVVGLVAGAVMWR |
Ga0207707_114546061 | 3300025912 | Corn Rhizosphere | AGTAVLVYANRPECNMNQSAGGCGYGTKVIGGSVLAGGVVSLFVGALTWR |
Ga0207663_105409822 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | SIAALMLGSIAAIAGTAVLVYANRPECTTNQFAGGCGYGTKVVGGAVLSGGVVGLVIGALTWR |
Ga0207694_110191441 | 3300025924 | Corn Rhizosphere | STFGQRGFRGRGRRDNDGARAAIILGAVATIAGTAVLVYANRPDCSTNPTAGGCGYGTKVVGGALLTAGVVSLLVGALTWR |
Ga0207650_117879921 | 3300025925 | Switchgrass Rhizosphere | ALVTITGGAILVYANRPDCKFYGGQGCGYGTRVIGGAILSAGLVGMLAGAVAWK |
Ga0207686_115894931 | 3300025934 | Miscanthus Rhizosphere | RRRSGGRNGGAAAAIILGAAAAIAGTAVLVYANRPDCVGNRITNGCGYGTKVIGGSVLAGGVVSVVVGAATWR |
Ga0207711_105320383 | 3300025941 | Switchgrass Rhizosphere | ITGTAILVYAHRPDCRYHEFASGCGYGTKVVGGAVVAGGVVGLVVGALTW |
Ga0207661_112051971 | 3300025944 | Corn Rhizosphere | GTAVLVYANRPDCNVNPNLGGCGYGTKVVGASVLTGGVVGLVAGAVMWR |
Ga0207677_101653103 | 3300026023 | Miscanthus Rhizosphere | MLGAVGAIAGTAVLVYANRPDCNVNPNLGGCGYGTRVVGASVLSGGIVGLMVGAVMWR |
Ga0207677_120152911 | 3300026023 | Miscanthus Rhizosphere | YPYPYPPAYHVRHDGSIAALMIGAAAAITGTAVLVYANRPECTFAPYAGGCGYGTKVVGGAVLAGGVVGLFVGALTW |
Ga0207676_112731781 | 3300026095 | Switchgrass Rhizosphere | QRRGYRGRGSGRHDGARAAIFLGAVGVIAGTAVLVYTNRPECRLDERANGCGYGTKVTGSAVLSAGIVGLVVGALTWR |
Ga0209068_101400692 | 3300027894 | Watersheds | VGSAVLIYANRPECSVSANNSGCGYGTKVVGGAVLTAGLAGLTIGAITWR |
Ga0209583_105814332 | 3300027910 | Watersheds | GAPYPYRPRRNGAIAAIMIGAAAAITGAAVLFYANRPECSTNPIASGCGYGPKVVGTAALSGGLVGLFIGALTWR |
Ga0209698_110080301 | 3300027911 | Watersheds | RGGGGRNGAVAALLIGATASIAGAAILIYANRPECSTTDQMASGCGYGTKVIGGAVLTGGIVALAIGALTWR |
Ga0209069_108887821 | 3300027915 | Watersheds | IMIGAAAAITGAAVLFYANRPECNTDPGAGGCGYGPKVVGTAALSGGLVGLFVGALTWR |
Ga0209168_101703341 | 3300027986 | Surface Soil | TAIFLGAAGAIAGTATLLYANRPECGFSPNAGGCGYGTKVVGGSVLAAGVVGLVVGAALW |
Ga0268265_109087331 | 3300028380 | Switchgrass Rhizosphere | AAMVLGAGAAIAGAAVLVYANRPDCRPSQTTNGCGYGTKVIGGAVLSAGVVGLVAGALTW |
Ga0265461_125750421 | 3300030743 | Soil | RDGSIAAIMVGSVVAIAGAAILIYANRPECDVHQFAGGCGYGTKVVGGAVLSGGVVSLVVGALTWR |
Ga0308198_11020021 | 3300030904 | Soil | ANRPECNGNPNRSGCGYGTKVVGGAVLSVGIVGIVVGAARWR |
Ga0318542_104302162 | 3300031668 | Soil | WGRGYRRGRGRNAGAATAIFLGAAGTIAGTALLVYAGRPECGGNPELGGCGYGTKVLGGAVLSAGLVGVMVGALTWR |
Ga0307469_121454971 | 3300031720 | Hardwood Forest Soil | GQVYRGRPYSLRRHDGSMAAILLGSAAAIAGTAVLVYANRPECSYNQYAGGCGYGTKVVGTSVLVGGVVSLFVGALTW |
Ga0307479_117138771 | 3300031962 | Hardwood Forest Soil | ASVDSSVLSQRGFGRGRGRGRNDAATAAIVLGAIGTIAGAAVLVYADRPECNANPNLGGCGYGTKVVGGAVLTAGLVGLMVGALTWR |
Ga0318532_103306202 | 3300032051 | Soil | RGRGRNAGAATAIFLGAAGTIAGTALLVYAGRPECGGNPELGGCGYGTKVLGGAVLSAGLVGVMVGALTWR |
Ga0307471_1032729302 | 3300032180 | Hardwood Forest Soil | TIAGTAVLVYANRPECRTVPSAGGCGYGTKVVGGAVLSAGLVGLIVGAVTWR |
Ga0335085_115770982 | 3300032770 | Soil | VAAIAGTAVLVYANRPECSTNQLAGGCGYGTKVVGGAVLSAGVVGVVVGAITW |
Ga0335085_118002211 | 3300032770 | Soil | FHASDDQVYVGPPVPMYRHSNDGALAAILIGATAAITGTAVLVYANRPECSFNPYGGGCGYGTKVVGGAILAGGIVGLTVGALIWK |
Ga0310810_101772621 | 3300033412 | Soil | AGTAILLYANRPECSTNPYRADGCGYGTKVVGGAALGLGVMGFTIAAITW |
Ga0316624_122209271 | 3300033486 | Soil | GRHAAAAAIILGAVGSIAGGAILVYANRPECSTNPVASGCGYGTKVIGGAVLSAGIVGLVVGALTWR |
Ga0316628_1041200162 | 3300033513 | Soil | RNRAVAAIAIGAVASIAGAAILVYANRPECGTNQTASGCGYGTKVVGGAVLSAGIVGLLVGALTWR |
Ga0370493_0027182_1464_1643 | 3300034129 | Untreated Peat Soil | LVLGAIGTIAGSALLLYANRPECSAHQFADGCGYGTKVVGGSLLSAGIVGVVVGAVTWR |
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