NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105228

Metagenome / Metatranscriptome Family F105228

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105228
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 70 residues
Representative Sequence VGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSAST
Number of Associated Samples 79
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 6.00 %
% of genes from short scaffolds (< 2000 bps) 6.00 %
Associated GOLD sequencing projects 65
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (97.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(51.000 % of family members)
Environment Ontology (ENVO) Unclassified
(68.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(82.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.37%    β-sheet: 0.00%    Coil/Unstructured: 62.63%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF03237Terminase_6N 55.00
PF14550Peptidase_S78_2 2.00
PF03864Phage_cap_E 1.00
PF06568DUF1127 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG5457Uncharacterized conserved protein YjiS, DUF1127 familyFunction unknown [S] 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.00 %
All OrganismsrootAll Organisms3.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300016746|Ga0182055_1047556Not Available572Open in IMG/M
3300017726|Ga0181381_1016308All Organisms → Viruses → Predicted Viral1712Open in IMG/M
3300017951|Ga0181577_10465976Not Available795Open in IMG/M
3300022183|Ga0196891_1055256Not Available717Open in IMG/M
3300024320|Ga0233398_1024333All Organisms → Viruses → Predicted Viral1706Open in IMG/M
3300025108|Ga0208793_1068180All Organisms → Viruses → Predicted Viral1053Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous51.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh12.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater4.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine4.00%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat3.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.00%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.00%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment1.00%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water1.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.00%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.00%
MEnvironmental → Aquatic → Marine → Unclassified → Unclassified → M1.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.00%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water1.00%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment1.00%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment1.00%
Marine Brown Algae (Kelp) AssociatedHost-Associated → Algae → Brown Algae → Unclassified → Unclassified → Marine Brown Algae (Kelp) Associated1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2022920000Saline water microbial communities from Qinghai Lake, Tibetan Plateau - High mountain lake (unassembled)EnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005611Saline surface water microbial communities from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005731Seawater microbial communities from Vineyard Sound, MA, USA - succinate ammended T14EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007864Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0umEnvironmentalOpen in IMG/M
3300007962Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010390Giant kelp blades associated microbial communities from the kelp forest near Monterey Bay Aquarium, California, USA ? sample AHost-AssociatedOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300012528Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016724Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016737Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011506CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016742Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011511BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016746Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101401AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016766Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022067Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v3)EnvironmentalOpen in IMG/M
3300022149Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022159Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v3)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300022934Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300024320Seawater microbial communities from Monterey Bay, California, United States - 38DEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027571Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)EnvironmentalOpen in IMG/M
3300031645Marine microbial communities from Ellis Fjord, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
QL_na_84722702022920000Saline WaterLAGDFKSQELFLRSKGGWSPTHTVNEVDQEVDPDMDESAIDTLLGLLGINDDNSESHNE
Ga0074648_112009913300005512Saline Water And SedimentIAQERADIVGQIGSVVIQQALDGDFKAAEFYLRSKGGWSPTQTNIEVEGPADADEDTGAIDSLMTLLGKKNDNPEEQSSNDNSE*
Ga0074647_104229113300005611Saline Water And SedimentEKASIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNSPDA*
Ga0076919_101823113300005731MIAEEKASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVEQLEDPDVDESAIDSLMTLLGKTRTDDNSAST*
Ga0075474_1010578013300006025AqueousERADIVGMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDNG*
Ga0075478_1005108013300006026AqueousVGMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQETDPEMDESAIDALMTLLGKSRDPSDNSE*
Ga0075462_1016518113300006027AqueousMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDVDPEMDESAIDTLMTLLGKSRDATDNSE*
Ga0075462_1025219513300006027AqueousGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSPDS*
Ga0075466_115045323300006029AqueousLYGEDIAEEKASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTNDYSPDS*
Ga0075511_168198923300006402AqueousGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNSAST*
Ga0075461_1004525213300006637AqueousRAEIIGQVGAIVVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDLDEGAINTLMSLLGKNEDNSE*
Ga0098048_111838523300006752MarineEDIAEEKASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTNDYSPDS*
Ga0070749_1018164423300006802AqueousRADIVGMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDNG*
Ga0075467_1072470413300006803AqueousMISEERAEIIGQVGAIVVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDLDEGAINTLMSLLGKNEDNVE*
Ga0075481_1031730113300006868AqueousSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRNNDNSTDA*
Ga0075479_1003792933300006870AqueousNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQETDPEMDESAIDALMTLLGKSRDPSDNSE*
Ga0070750_1027027723300006916AqueousVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQETDPEMDESAIDTLMTLLGKSRDATDNSE*
Ga0070750_1031139513300006916AqueousQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDTLMTLLGKSRDATDNSE
Ga0070750_1034642713300006916AqueousLEGDFKSQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDNG*
Ga0070750_1040146713300006916AqueousQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDALMTLLGKSRDATDNSE
Ga0070746_1027569313300006919AqueousNKVVQQALDGDFKSQELYLRSKGGWSPNSTVNENEQETDPDMDESAIDALMTLLGKSSTQEEPED*
Ga0070746_1038708013300006919AqueousKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDTLMTLLGKSRDATDNSE*
Ga0070746_1042518723300006919AqueousDFKSQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDNG*
Ga0075463_1025924613300007236AqueousQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDNG*
Ga0070753_107682513300007346AqueousIVGMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDALMTLLGKSRDATDNSE*
Ga0070753_126117213300007346AqueousERSDIVGMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDTLMTLLGKSRDATDNSE*
Ga0099848_122611823300007541AqueousGSVVIQQALDGDFKAAEFYLRSKGGWSPTQTNIEVEGSGDADEDTGAIDSLMSLLGKSNESPDNSK*
Ga0105749_106940413300007864Estuary WaterEEKASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMNLLGKTRTDDNSAST*
Ga0102907_115061913300007962EstuarineGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSAST*
Ga0075480_1030906623300008012AqueousGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDVDPDMDESAIDTLMTLLGKSRDATDNSE*
Ga0115550_109866623300009076Pelagic MarineASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMNLLGKTRDNSAST*
Ga0115008_1032608013300009436MarineNVVVQQAIDGHFASQELFLRSKGGWSPQSTVNDPDEYTDPDQDSSAIDALMTLLGKDTDDPSNPTG*
Ga0115556_123685723300009437Pelagic MarineEEKASIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVEQLEDPDVDESAIDSLMTLLGKTRTDDNSAST*
Ga0115553_128363413300009445Pelagic MarineVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNREA*
Ga0115572_1012980713300009507Pelagic MarineQDIAQERSDIVGKVGNVVVQQALDGDFKSQELFLRSKGGWSPNSTLNENEQETDADTDESAIDALMTLLGKSRDPSDNSE*
Ga0115103_127940023300009599MarineFKSQELFLRSKGGWSPNSTLNENEQEADADTDESAIDALMTLLGKSRDPSDNSE*
Ga0129324_1029224713300010368Freshwater To Marine Saline GradientASIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRNNDNSAST*
Ga0136854_17926323300010390Marine Brown Algae (Kelp) AssociatedEIVGAIGSVVVQQALDGDFKSQEFYLRSKGGWSPNSTLNEVEQTEDPDVDESAIDSLMGLLGKNTEQDESNS*
Ga0118733_10786006713300010430Marine SedimentEKASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSPDS*
Ga0129352_1077113313300012528AqueousSEERAEIIGQVGAVVVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDLDEGAINTLMSLLGKNEDND*
Ga0182048_110009023300016724Salt MarshSIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSSST
Ga0182047_127179723300016737Salt MarshGSVVVQRALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSAST
Ga0182052_107111523300016742Salt MarshVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSAST
Ga0182055_104755623300016746Salt MarshSATFYKLYGDDIAQERAEIVGLIGSVVIQQAMDGDFKAAEFYLRSKGGWSPTQTNIEVEGSGDADEDTGAIDSLMSLLGKTNESPDNS
Ga0182091_152917013300016766Salt MarshDIVGQVGSVVIQQALDGDFKAAELFLRSKGGWSPTQTINETELTEDPDTDESAIDSLMTLLGKTSNGTTSGEDNG
Ga0180120_1000305013300017697Freshwater To Marine Saline GradientNVVVQQALDGDFKSQELFLRSKGGWSPNSTLNENEQETDADTDESAIDALMTLLGKSRDPSDNSE
Ga0181381_101630813300017726SeawaterEDIAEEKASIVGAVGSVVIQQALDGDFKAAELFLRSKGGWSPTQTQVEVEGTEDADTDESAIDSLMNLLGKSSDNSTDS
Ga0181400_106532623300017752SeawaterEEKASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMNLLGKTRTNDNSTDA
Ga0181380_118985223300017782SeawaterVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSAST
Ga0181607_1068207623300017950Salt MarshSIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSAST
Ga0181577_1004804113300017951Salt MarshVGSVVIQQALDGDFKAAELFLRSKGGWSPTQTINEVEQSEDPGTDEGAIGTLMMLLGKNDPDENNSD
Ga0181577_1046597623300017951Salt MarshYGEDIAEEKASIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRNNDNSTDA
Ga0181577_1081182523300017951Salt MarshEEKASIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNIAST
Ga0194023_100461713300019756FreshwaterASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRSNDNSAST
Ga0194023_110768633300019756FreshwaterYGEDIAEEKASIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNSAST
Ga0194024_100949233300019765FreshwaterEDIAEEKASIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNSAST
Ga0194024_112399713300019765FreshwaterAAIVGQVGSVVIQQALEGDFKSQELFLRSKGGWSPTSTVNEQELSEDPDTDESAIDSLITLLGKTKPDSKEDS
Ga0206130_1014155923300020187SeawaterSIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVEQLEDPDVDESAIDSLMTLLGKSRNSDNSTDSEGVTRLRSS
Ga0181604_1043958713300020191Salt MarshGEDIAEEKASIVGAVGSVVIQQALDGDFKAAELFLRSKGGWSPTQTQVEVEGTEDADTDESAIDALMNLLGKSSDNSTDS
Ga0213867_122313613300021335SeawaterALEGDFKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDTLMTLLGKSRDTTDNSE
Ga0222719_1038957223300021964Estuarine WaterGEDIAEEKASIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNSAST
Ga0212024_101796623300022065AqueousIAQERSDIVGMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQETDPEMDESAIDALMTLLGKSRDPSDNSE
Ga0196895_101519313300022067AqueousFFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNSAST
Ga0196907_10205223300022149AqueousSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSPDS
Ga0196897_103791223300022158AqueousIGQVGAVVVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDLDEGAINTLMSLLGKNEDNVE
Ga0196897_104598923300022158AqueousVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDVDPEMDESAIDTLMTLLGKSRDATDNSE
Ga0196893_101478523300022159AqueousGGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNSAST
Ga0212020_104884623300022167AqueousNADIVGMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDNG
Ga0212020_109048923300022167AqueousVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRNNDNSAST
Ga0212027_102010223300022168AqueousVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSPDS
Ga0196891_102262823300022183AqueousLEGDFKSQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDNG
Ga0196891_105525613300022183AqueousKYQNAPRSTNTLYKIYGQMISEERAEIIGQVGAIVVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDLDEGAINTLMSLLGKNEDNVE
Ga0196899_114750423300022187AqueousSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDTLMTLLGKSRDATDNSE
Ga0255752_1004817613300022929Salt MarshQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRDNSAST
Ga0255781_1044922923300022934Salt MarshKVVQQAMEGDFKSQELYLRSKGGWSPNSTVNENEQEVDADMDESAIDALMTLLGKNPSTEGEPDPS
(restricted) Ga0233432_1023554623300023109SeawaterDIAEEKASIVGAVGSVVIQQALDGDFKAAELFLRSKGGWSPTQTQVEVEGTEDADTDESAIDALMNLLGKSSDNSTDS
Ga0233398_102433313300024320SeawaterKASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMNLLGKTRNNDNSAST
Ga0208667_101836213300025070MarineATLYKIYGELIAETRADVVGQVGSVIVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDTDEGAIDTLMMLLGKNDPDENNSD
Ga0208792_104692323300025085MarineEEKASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMNLLGKTRIDDNSAST
Ga0208793_106818023300025108MarineFYKLYGEDIAEEKASIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMNLLGKTRTNDYSPDS
Ga0208303_110381223300025543AqueousEDIAEEKASIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMNLLGKTRTDDNSPDS
Ga0208004_100999913300025630AqueousNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDVDPEMDESAIDTLMTLLGKTRSDDSSDNG
Ga0208004_110699223300025630AqueousGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDNG
Ga0208428_117379523300025653AqueousELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDTLMTLLGKSRDATDNSE
Ga0208898_116233713300025671AqueousQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDTLMTLLGKSRDATDNS
Ga0208767_100084013300025769AqueousQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDN
Ga0208767_107952223300025769AqueousEERAEIIGQVGAIVVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDLDEGAINTLMSLLGKNEDNSE
Ga0208767_108723923300025769AqueousEERAEIIGQVGAIVVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDLDEGAINTLMSLLGKNEDNVE
Ga0208645_100446213300025853AqueousQMISEERAEIIGQVGAVVVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDLDEGAINTLMSLLGKNEDNVE
Ga0208645_127268923300025853AqueousGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRTDDNSAST
Ga0208644_134827413300025889AqueousGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDVDPEMDESAIDTLMTLLGKSRDATDNSE
Ga0208897_116282013300027571EstuarineSIVGAVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVEQLEDPDVDESAIDSLMTLLGKTRTDDNSAST
Ga0307990_107728823300031645MarineGNVVVQQALEGDFKSQEFYLRSKGGWSPNSTINEMELETDPDTDDSAIDSLLGLLGKSKPDDNETPSNS
Ga0316202_1013490113300032277Microbial MatVVIQQALDGDFKAAELFLRSKGGWSPTNTVNEVEQTEDPETDTSAIDSLMTLLGKGNDNSSDS
Ga0316202_1027643523300032277Microbial MatVGSVVVQQALEGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMNLLGKTRDNSAST
Ga0316202_1060352223300032277Microbial MatIVGAVGSVVVQQALDGDFKSQELFLRSKGGWSPTSTVNEVDQVEDPDVDESAIDSLMTLLGKTRSNDYSPDS
Ga0348335_002857_11459_116683300034374AqueousMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDTEADMDESAIDALMTLLGKSRPDDSSDNG
Ga0348335_026547_2_1933300034374AqueousVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDALMTLLGKSRDATDNSE
Ga0348336_174980_356_5653300034375AqueousMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDTLMTLLGKTRSDDSSDNG
Ga0348337_158065_399_6263300034418AqueousMILEERAEIIGQVGAVVVQQALDGDFKAAEFYLRSKGGWSPTQTINEVEQSEDPDLDEGAINTLMSLLGKNEDND


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.