NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105225

Metagenome / Metatranscriptome Family F105225

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105225
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 41 residues
Representative Sequence MYVLTIGSIVYLYDNEKDARKAFHQSVAKNGINNVKVTYV
Number of Associated Samples 89
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 73.00 %
% of genes near scaffold ends (potentially truncated) 27.00 %
% of genes from short scaffolds (< 2000 bps) 79.00 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (67.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine
(21.000 % of family members)
Environment Ontology (ENVO) Unclassified
(60.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(96.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.47%    β-sheet: 22.06%    Coil/Unstructured: 51.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01521Fe-S_biosyn 5.00
PF137592OG-FeII_Oxy_5 2.00
PF00478IMPDH 1.00
PF04434SWIM 1.00
PF06067DUF932 1.00
PF09293RNaseH_C 1.00
PF13392HNH_3 1.00
PF136402OG-FeII_Oxy_3 1.00
PF04055Radical_SAM 1.00
PF02543Carbam_trans_N 1.00
PF01467CTP_transf_like 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0316Fe-S cluster assembly iron-binding protein IscAPosttranslational modification, protein turnover, chaperones [O] 5.00
COG4841Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF familyFunction unknown [S] 5.00
COG2192Predicted carbamoyl transferase, NodU familyGeneral function prediction only [R] 1.00
COG4279Uncharacterized protein, contains SWIM-type Zn finger domainFunction unknown [S] 1.00
COG4715Uncharacterized protein, contains SWIM-type Zn finger domainFunction unknown [S] 1.00
COG5431Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domainGeneral function prediction only [R] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A67.00 %
All OrganismsrootAll Organisms33.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10172964Not Available759Open in IMG/M
3300000117|DelMOWin2010_c10001574Not Available14687Open in IMG/M
3300000947|BBAY92_10027019All Organisms → Viruses → Predicted Viral1566Open in IMG/M
3300001355|JGI20158J14315_10002680Not Available12249Open in IMG/M
3300001778|ACM18_1068102Not Available588Open in IMG/M
3300001830|ACM40_1002540All Organisms → Viruses → Predicted Viral1011Open in IMG/M
3300001834|ACM2_1025923Not Available585Open in IMG/M
3300004097|Ga0055584_101268088Not Available768Open in IMG/M
3300005433|Ga0066830_10026143Not Available1160Open in IMG/M
3300005941|Ga0070743_10120010Not Available880Open in IMG/M
3300006404|Ga0075515_10141737Not Available689Open in IMG/M
3300006405|Ga0075510_11117820All Organisms → Viruses → Predicted Viral1704Open in IMG/M
3300006752|Ga0098048_1235643Not Available536Open in IMG/M
3300006870|Ga0075479_10009632All Organisms → Viruses → Predicted Viral4345Open in IMG/M
3300006874|Ga0075475_10049576All Organisms → Viruses → Predicted Viral1979Open in IMG/M
3300006990|Ga0098046_1018437All Organisms → Viruses → Predicted Viral1792Open in IMG/M
3300007276|Ga0070747_1316498Not Available535Open in IMG/M
3300007557|Ga0102821_1101204Not Available734Open in IMG/M
3300007637|Ga0102906_1080277Not Available915Open in IMG/M
3300009001|Ga0102963_1011666All Organisms → Viruses → Predicted Viral3746Open in IMG/M
3300009001|Ga0102963_1177191Not Available854Open in IMG/M
3300009027|Ga0102957_1297741Not Available590Open in IMG/M
3300009049|Ga0102911_1195280Not Available570Open in IMG/M
3300009071|Ga0115566_10187265All Organisms → Viruses → Predicted Viral1271Open in IMG/M
3300009071|Ga0115566_10192486All Organisms → Viruses → Predicted Viral1250Open in IMG/M
3300009071|Ga0115566_10493125Not Available695Open in IMG/M
3300009077|Ga0115552_1002984Not Available9560Open in IMG/M
3300009080|Ga0102815_10364430Not Available802Open in IMG/M
3300009433|Ga0115545_1156401Not Available793Open in IMG/M
3300009440|Ga0115561_1251335Not Available660Open in IMG/M
3300009443|Ga0115557_1118908All Organisms → Viruses → Predicted Viral1095Open in IMG/M
3300009447|Ga0115560_1337282Not Available572Open in IMG/M
3300009449|Ga0115558_1443921Not Available502Open in IMG/M
3300009467|Ga0115565_10430154Not Available595Open in IMG/M
3300009472|Ga0115554_1028053All Organisms → Viruses → Predicted Viral2776Open in IMG/M
3300009472|Ga0115554_1102471All Organisms → Viruses → Predicted Viral1216Open in IMG/M
3300009476|Ga0115555_1431322Not Available524Open in IMG/M
3300009498|Ga0115568_10003058Not Available11493Open in IMG/M
3300009507|Ga0115572_10495032Not Available678Open in IMG/M
3300009508|Ga0115567_10026349All Organisms → Viruses → Predicted Viral4844Open in IMG/M
3300010150|Ga0098056_1172651Not Available726Open in IMG/M
3300010300|Ga0129351_1058310All Organisms → Viruses → Predicted Viral1575Open in IMG/M
3300010300|Ga0129351_1078206All Organisms → Viruses → Predicted Viral1338Open in IMG/M
3300010300|Ga0129351_1234737Not Available704Open in IMG/M
3300012528|Ga0129352_10707100Not Available715Open in IMG/M
3300016743|Ga0182083_1085889Not Available2224Open in IMG/M
3300017709|Ga0181387_1074410Not Available684Open in IMG/M
3300017710|Ga0181403_1111900Not Available571Open in IMG/M
3300017717|Ga0181404_1182768Not Available501Open in IMG/M
3300017720|Ga0181383_1178423Not Available567Open in IMG/M
3300017737|Ga0187218_1141570Not Available570Open in IMG/M
3300017742|Ga0181399_1168528Not Available521Open in IMG/M
3300017760|Ga0181408_1146008Not Available610Open in IMG/M
3300017760|Ga0181408_1163563Not Available571Open in IMG/M
3300017770|Ga0187217_1026554All Organisms → Viruses → Predicted Viral2060Open in IMG/M
3300017786|Ga0181424_10038303All Organisms → Viruses → Predicted Viral2078Open in IMG/M
3300017818|Ga0181565_10127970All Organisms → Viruses → Predicted Viral1786Open in IMG/M
3300017824|Ga0181552_10009901Not Available6269Open in IMG/M
3300017824|Ga0181552_10044265All Organisms → Viruses → Predicted Viral2644Open in IMG/M
3300017949|Ga0181584_10019599All Organisms → cellular organisms → Bacteria4952Open in IMG/M
3300017950|Ga0181607_10604529Not Available576Open in IMG/M
3300017951|Ga0181577_10247916All Organisms → Viruses → Predicted Viral1172Open in IMG/M
3300018421|Ga0181592_10378609Not Available1004Open in IMG/M
3300018424|Ga0181591_10200177All Organisms → Viruses → Predicted Viral1573Open in IMG/M
3300018426|Ga0181566_10617451All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300020174|Ga0181603_10348610Not Available556Open in IMG/M
3300020175|Ga0206124_10016753All Organisms → Viruses → Predicted Viral3793Open in IMG/M
3300020175|Ga0206124_10093933All Organisms → Viruses → Predicted Viral1250Open in IMG/M
3300020175|Ga0206124_10234734Not Available714Open in IMG/M
3300020176|Ga0181556_1312685Not Available530Open in IMG/M
3300020438|Ga0211576_10467032Not Available640Open in IMG/M
3300020469|Ga0211577_10840608Not Available525Open in IMG/M
3300021085|Ga0206677_10004587Not Available11199Open in IMG/M
3300021335|Ga0213867_1256417Not Available564Open in IMG/M
3300021347|Ga0213862_10147033Not Available829Open in IMG/M
3300021364|Ga0213859_10051432All Organisms → Viruses → Predicted Viral1958Open in IMG/M
3300021375|Ga0213869_10002764Not Available11975Open in IMG/M
3300021375|Ga0213869_10016611All Organisms → Viruses → Predicted Viral4232Open in IMG/M
3300021389|Ga0213868_10253791All Organisms → Viruses → Predicted Viral1026Open in IMG/M
3300021958|Ga0222718_10389716Not Available699Open in IMG/M
3300021964|Ga0222719_10577813Not Available658Open in IMG/M
3300022074|Ga0224906_1127813Not Available731Open in IMG/M
3300022183|Ga0196891_1079241Not Available583Open in IMG/M
3300022900|Ga0255771_1112740All Organisms → Viruses → Predicted Viral1220Open in IMG/M
3300022909|Ga0255755_1322083Not Available530Open in IMG/M
3300023175|Ga0255777_10356865Not Available805Open in IMG/M
3300023709|Ga0232122_1070474Not Available844Open in IMG/M
3300024346|Ga0244775_10008791Not Available9774Open in IMG/M
3300025610|Ga0208149_1074548Not Available843Open in IMG/M
3300025653|Ga0208428_1000816Not Available13765Open in IMG/M
3300025674|Ga0208162_1189442Not Available531Open in IMG/M
3300025680|Ga0209306_1222875Not Available507Open in IMG/M
3300025712|Ga0209305_1078831All Organisms → Viruses → Predicted Viral1083Open in IMG/M
3300025771|Ga0208427_1220310Not Available595Open in IMG/M
3300025810|Ga0208543_1039615All Organisms → Viruses → Predicted Viral1175Open in IMG/M
3300025816|Ga0209193_1095160Not Available749Open in IMG/M
3300025830|Ga0209832_1059410All Organisms → Viruses → Predicted Viral1331Open in IMG/M
3300025849|Ga0209603_1025576All Organisms → Viruses → Predicted Viral3580Open in IMG/M
3300026136|Ga0208763_1033596Not Available770Open in IMG/M
3300027571|Ga0208897_1140980Not Available599Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine21.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh16.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous12.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater11.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater6.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine4.00%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton3.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.00%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine3.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.00%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water3.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.00%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.00%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001778Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3gEnvironmentalOpen in IMG/M
3300001830Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM40, ROCA_DNA028_0.2um_3lEnvironmentalOpen in IMG/M
3300001834Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM2, ROCA_DNA019_0.2um_2gEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005433Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45BEnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006404Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006405Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007557Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715EnvironmentalOpen in IMG/M
3300007637Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02EnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009049Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300012528Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016743Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017737Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021347Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022900Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaGEnvironmentalOpen in IMG/M
3300022909Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300023709Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025680Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)EnvironmentalOpen in IMG/M
3300025712Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025816Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)EnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300026136Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B (SPAdes)EnvironmentalOpen in IMG/M
3300027571Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1017296423300000101MarineMYVLTIGTTTYLYDNETDARKAFHESVVKNGINNVKVTYNG*
DelMOWin2010_1000157473300000117MarineMYVLTIGSIVYLYDNEKDARKAFHQSVAKNGINNVKVTYV*
BBAY92_1002701923300000947Macroalgal SurfaceVYKLVIGKIVYLFACEHEARAAYHEAVEKNGINNVEVTYYD*
JGI20158J14315_10002680193300001355Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHQSVVKNGINNVKVTYV*
ACM18_106810223300001778Marine PlanktonMYVLTINGIVYLYDNEKTARKAYHESVAKNGLENVTIEKKNILYW*
ACM40_100254013300001830Marine PlanktonMYVLTINGIVYLYDNEKTARKAYHESVAKNGINNVSITCK*
ACM2_102592323300001834Marine PlanktonMYVLTINGIVYLYDNEKTARKAYHESVAKNDINNVSITCK*
Ga0055584_10126808823300004097Pelagic MarineMYVITIGSIVYLYDNETDARKAFHESVVKNGINNVKVTYNG*
Ga0066830_1002614323300005433MarineMYKVIIGNIVYLYDNEKDARKAYHVAVEKNGINNVEVSYE*
Ga0070743_1012001033300005941EstuarineMYVLTIGSIVYLYDNEKDARKAFHQSVATNGINNVKVTYV*
Ga0075515_1014173733300006404AqueousMYVLTIGSIVYLYDNETDARKAFHESVVKNGINNVKVTYNG*
Ga0075510_1111782023300006405AqueousMYVLTIGTITYLYDNEKDARKAFHQSVATNGINNVKVTYV*
Ga0098048_123564323300006752MarineMYVLTIGSIVYLYDNDKDARKAYHHAVQKNGINNVKVTYND*
Ga0075479_1000963263300006870AqueousMYVLTIGSIVYLYDNEKDARKAFHQSVAKNGINNVKVKYV*
Ga0075475_1004957623300006874AqueousMYVLTIGTIVYLYDNEKEARKAFHQSVAKNGINNVKVTYV*
Ga0098046_101843723300006990MarineMYVLTIGSIVYLYDNDKCARKAFHLAVQKNGINNVKVTYNG*
Ga0070747_131649813300007276AqueousMYVLTIGTITYLYDNEKEARKAFHQSVATNGINNVKVTYV*
Ga0102821_110120423300007557EstuarineMYVLTIGTITYLYDNEKEARKAFHQSVAKNGINNVEVTYV*
Ga0102906_108027723300007637EstuarineMYVLTIGTITYLYDNEKEARKAFHQSVAKNGINNVKVTYV*
Ga0102963_101166623300009001Pond WaterMYTLTIGSIVYLFDNDKDARSAFHQAVSKNGINNVKVTYND*
Ga0102963_117719113300009001Pond WaterMKNQGESMYKVIIGDIVYLYDNVKEARKAFHIAVSKNGINNVKVTYHGE*
Ga0102957_129774123300009027Pond WaterMYTLTIGSIVYLFDNDKDARKAFHQAVSKNGINNVKVTYND*
Ga0102911_119528023300009049EstuarineMYVLTIGSIVYLYDNEKDARKAFHQSVAKNGINNVEVTYV*
Ga0115566_1018726533300009071Pelagic MarineMYVLTINGIVYLYDNEKDARKAFHESVAKNGLDNVKITKETL*
Ga0115566_1019248633300009071Pelagic MarineMYILTIGSIVYMYDNEKEARKAFHQAVQKNNINNVKVVYNG*
Ga0115566_1049312523300009071Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHQAVQKNNINNVKVKYV*
Ga0115552_1002984173300009077Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHQSVVKNGINNVKVKYV*
Ga0102815_1036443013300009080EstuarineMYVLTIGTITYLYDNEKDARKAFHQSVTKNGINNVKVTYV*
Ga0115545_115640133300009433Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHQSVVKNGINNVK
Ga0115561_125133513300009440Pelagic MarineVLTIGSIVTLYDNEKDARKSYHQSVAKNGINNVKVKYV*
Ga0115557_111890823300009443Pelagic MarineMYVLTIGSIVTLYDNEKDARKAYHQSVAKNGINNVKVKYV*
Ga0115560_133728223300009447Pelagic MarineYVLTIGSIVTLYDNEKDARKAYHQSVAKNGINNVKVKYV*
Ga0115558_144392113300009449Pelagic MarineMYILTIGSIVYMYDNEKEARKAFHQAVQKNNINNVKV
Ga0115565_1043015423300009467Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHQAVQKNNINNVKVTYV*
Ga0115554_102805393300009472Pelagic MarineMYVLTIGSIVYLYDNEKDARKAYHQSVAKNGINNVKVKYV*
Ga0115554_110247113300009472Pelagic MarineLVSRVYQYDNEKDARKAFHQSVVKNGINNVKVTYV*
Ga0115555_143132223300009476Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHQAVQKNNINNVKVVYNG*
Ga0115568_1000305863300009498Pelagic MarineMYVLTIGSIVYLYDNEKEARKAFHQSVVKNGINNVKVTYV*
Ga0115572_1049503223300009507Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHSAVQKNGINNVKVKYV*
Ga0115567_1002634943300009508Pelagic MarineMYILTIGSIVYMYDNEKEARKAFHQAVQKNNINNIKVVYNG*
Ga0098056_117265133300010150MarineSIKGDCIMYVLTIGSIVYLYDNDKCARKAFHLAVQKNGINNVKVTYNG*
Ga0129351_105831023300010300Freshwater To Marine Saline GradientMYVLTIGTITYLYDNETDARKAFHESVVKNGINNVKVTYNG*
Ga0129351_107820633300010300Freshwater To Marine Saline GradientSGIIMYVLTIGSIVYLYDNEKDARKAFHQSVAKNGINNVKVTYV*
Ga0129351_123473723300010300Freshwater To Marine Saline GradientMYKVIIGDIVYLYDNVRAARKAFHIAVNKNGINNVKVTYVGG*
Ga0129352_1070710023300012528AqueousMYVLTIGSIVYLYDNERDARKAFHQSVAKNGINNVKVTYV*
Ga0182083_108588923300016743Salt MarshMYKVIIGDIVYLYDNIKDAPKAFHIAVSKNGINNVKATYQSK
Ga0181387_107441033300017709SeawaterMYVLTIGSIVYLFDNDKDARKAFHQAVSKNGINNVKVTYND
Ga0181403_111190033300017710SeawaterIKGDWIMYVLTIGSIVYLYANAKDARKAFHQAVSKNGINNVKVTYND
Ga0181404_118276833300017717SeawaterGSIVYLFDNDKDARKAFHQAVSKNGINSVKVTYND
Ga0181383_117842333300017720SeawaterIMYTLTIGSIVYLFDNDKDARKAFHQAVSKNGINNVKVTYND
Ga0187218_114157033300017737SeawaterIKGDWIMYTLTIGSIVYLFDNDKDARKAFHQAVSKNGINNVKVTYND
Ga0181399_116852813300017742SeawaterIMYILTIGSIVYLFDNDKDARKAFHQAVSKNGINNVKVTYND
Ga0181408_114600813300017760SeawaterTIGSIVYLYDNEKDARKAYHHAVQKNGINNVKVTYND
Ga0181408_116356313300017760SeawaterPYPIKGDWIMYILTIGSIVYLFDNDKDARKAFHQAVSKNGINNVKVTYND
Ga0187217_102655453300017770SeawaterMYVLTIGSIVYLYDNEKDARKAYHESVAKNGINNVKVTYND
Ga0181424_1003830313300017786SeawaterMYKVIIGDIVYLYDNEKDARKAFHIAVSKNGINNVQVSYE
Ga0181565_1012797023300017818Salt MarshMSVYVLTIGDIVYYYDNVRAARKAFHQSVVKNGINNVKITKVVYGD
Ga0181552_1000990113300017824Salt MarshMYKVIIGDIVYLYDNVRAARKAFHIAVNKNGINNVKVTYVGG
Ga0181552_1004426533300017824Salt MarshMFKVIIGDIVYLYDNMKDARKAFHVAVSKNGINNVKVTYNG
Ga0181584_1001959923300017949Salt MarshMYKVIIGDIVYLYDNIKDARKAFHIAVSKNGINNVKATYQSK
Ga0181607_1060452923300017950Salt MarshMSVYVLTIGDIVYYYDNVRAARKAFHQSVVKNGINNVKITKVVNGD
Ga0181577_1024791623300017951Salt MarshMFKVIIGDIVYLYDNMKDARKAFHIAVSKNGINNVKVTYNG
Ga0181592_1037860923300018421Salt MarshMPIVNKEGENMYKVIIGDIVYLYDNMKDARKAFHIAVTKNGINNVKVMYV
Ga0181591_1020017713300018424Salt MarshMFKVIIGDIVYLYDNIKDARKAFHVAVSKNGINNVKVTYNG
Ga0181566_1061745123300018426Salt MarshMFKVIIGDIVYLYDNMKDARKAFHVAVSKNGINNVK
Ga0181603_1034861023300020174Salt MarshMSVYVLTIGDIVYYYDNVRAARKAFHQSVVKNGINNVKITKVVYGN
Ga0206124_1001675363300020175SeawaterMYVLTIGSIVYLYDNEKDARKAFHQSVVKNGINNVKVKYV
Ga0206124_1009393343300020175SeawaterMYILTIGSIVYMYDNEKEARKAFHQAVQKNNINNVKVVYNG
Ga0206124_1023473433300020175SeawaterMYVLTIGSIVYLYDNEKDARKAFHQAVQKNNINNVKVKYV
Ga0181556_131268523300020176Salt MarshGDIMYILTIGTIVYYYDNVTDARKAFHQSVAKNGINNVKITKV
Ga0211576_1046703233300020438MarineMYILTIGSIVYLFDNDKDARKAFHQAVSKNGINNVKVTYND
Ga0211577_1084060833300020469MarineDWIMYTLTIGSIVYLFDNDKDARKAFHQAVSKNGINNVKVTYND
Ga0206677_1000458773300021085SeawaterMYVLTIGSIVYLYDNDKDARKAYHHAVQKNGINNVKVTYND
Ga0213867_125641713300021335SeawaterMYKVIIGDIVYLYDNVKAARKAFHIAVNKNGINNVKVTYVGG
Ga0213862_1014703333300021347SeawaterMYKVIIGNIVYLYDNIKAARKAFHVAVSKNGINNVKVTYHD
Ga0213859_1005143233300021364SeawaterMYKVIIGDIVYLYDNMKDARKAFHIAVTKNGINNVKVMYV
Ga0213869_10002764183300021375SeawaterRSGIIMYVLTIGTITYLYDNEKDARKAFHQSVAKNGINNVKVNYV
Ga0213869_1001661153300021375SeawaterMYVLTIGTTTYLYDNETDARKAFHESVVKNGINNVKVTYNG
Ga0213868_1025379133300021389SeawaterMYVLTIGTTTYLYDNEKDARKAFHQSVAKNGINNVKVTYV
Ga0222718_1038971613300021958Estuarine WaterMYKVIIGDIVYLYDNVKEARKAFHIAVSKNGINNVKVTYHGE
Ga0222719_1057781333300021964Estuarine WaterMYTLTIGSIVYLFDNDKDARKAFHQAVSKNGINNVKVTYND
Ga0224906_112781313300022074SeawaterMNYYKLMIGSIVYIYDNVRDARKAFHIAVSKNGINNVSITK
Ga0196891_107924123300022183AqueousMYVLTIGTIVYLYDNEKDARKAFHQSVATNGINNVKVTYV
Ga0255771_111274023300022900Salt MarshMFKVIIGDIVYLYDNMKDARKAFHVAVSKNGINNVKVT
Ga0255755_132208323300022909Salt MarshMYKVIIGDIVYLYDNVRAARKAFHIAVNKNGINNVKV
Ga0255777_1035686523300023175Salt MarshGDIVYLYDNIKDARKAFHIAVSKNGINNVKATYQSK
Ga0232122_107047423300023709Salt MarshMFKVIIGDIVYLYDNMKDARKAFHIAVSTNGINNVKVTYNG
Ga0244775_1000879153300024346EstuarineMYVLTIGTITYLYDNEKEARKAFHQSVAKNGINNVKVTYV
Ga0208149_107454823300025610AqueousMYVLTIGSIVYLYDNEKDARKAFHQSVATNGINNVKVTYV
Ga0208428_1000816173300025653AqueousMYVLTIGSIVYLYDNEKDARKAFHQSVAKNGINNVKVTYV
Ga0208162_118944223300025674AqueousMYVLTIGTIVYLYDNEKEARKAFHQSVATNGINNVKVTYV
Ga0209306_122287523300025680Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHQSVAKNGINNVKVKYV
Ga0209305_107883133300025712Pelagic MarineINGIDYLYDNEKDARKAFHESVAKNGLDNVKITKETL
Ga0208427_122031013300025771AqueousIGSIVYLYDNEKDARKAFHQSVATNGINNVKVTYV
Ga0208543_103961523300025810AqueousMYVLTIGTITYLYDNEKDARKAFHQSVAKNGINNVKVTYV
Ga0209193_109516023300025816Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHQSVVKNGINNVKVTYV
Ga0209832_105941013300025830Pelagic MarineIGSIVYLYDNEKDARKAYHQSVAKNGINNVKVKYV
Ga0209603_102557623300025849Pelagic MarineMYVLTIGSIVYLYDNEKDARKAFHSAVQKNGINNVKVKYV
Ga0208763_103359623300026136MarineMYKVIIGNIVYLYDNEKDARKAYHVAVEKNGINNVEVSYE
Ga0208897_114098013300027571EstuarineIIMYVLTIGTITYLYDNEKEARKAFHQSVAKNGINNVKVTYV


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