Basic Information | |
---|---|
Family ID | F105224 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 100 |
Average Sequence Length | 51 residues |
Representative Sequence | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSFNKLGGI |
Number of Associated Samples | 89 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 86 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
---|
|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater (28.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (43.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (89.000 % of family members) |
⦗Top⦘ |
Full Alignment |
---|
Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 |
Powered by MSAViewer |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 78.00% β-sheet: 0.00% Coil/Unstructured: 22.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
|||||
Powered by Feature Viewer |
⦗Top⦘ |
⦗Top⦘ |
⦗Top⦘ |
Visualization |
---|
River Water Marine Environmental And Host-Associated Surface Seawater Marine Aqueous Seawater Marine Surface Water Freshwater To Marine Saline Gradient Estuary Water Marine Seawater Salt Marsh Marine Marine Pelagic Marine Seawater Saline Water And Sediment Saline Water And Sediment |
Powered by ApexCharts |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
Ocean6-_01506300 | 2166559018 | Environmental And Host-Associated | MNAEDIIKLKKNALYTSLESKDFFGKFFNKSMLHYAVIMEVFSKNNFDGISYEK |
JGI20155J14468_101384242 | 3300001354 | Pelagic Marine | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAIMEVFSSNKLGGISYEKLCHSIPKSL |
JGI11772J19994_10260822 | 3300001748 | Saline Water And Sediment | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSYNKLGGISYEKLCHSI |
Ga0055584_1019214711 | 3300004097 | Pelagic Marine | MNAEEIIKLNKDALYSSLTSTDIFGKFFNKSILHYAAVMEIFSTNKLGGISYEKLCHSIPKSL |
Ga0066825_102500132 | 3300005510 | Marine | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIMEV |
Ga0066861_100583461 | 3300005522 | Marine | MNAEEIINFNKKALYTSLTSSDTSRKFFNKSILHYAATMEIFSFTKT |
Ga0074647_10258622 | 3300005611 | Saline Water And Sediment | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSYNKLGGISYEKLCHSIPKSLGSRS |
Ga0076924_12308462 | 3300005747 | Marine | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAIMEVFSSNKLGGISYEK |
Ga0075510_100008741 | 3300006405 | Aqueous | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSFNKL |
Ga0104347_1111354 | 3300007271 | Marine Surface Water | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIMEVFSCNRLG |
Ga0105020_11969811 | 3300007514 | Marine | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHN |
Ga0105748_100498402 | 3300007992 | Estuary Water | NAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAIMEIFSSNKLGGISYEKLCHSIPKSLG* |
Ga0105748_101905871 | 3300007992 | Estuary Water | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEVFSSNKL |
Ga0075480_100376071 | 3300008012 | Aqueous | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSFNKLGGISYEKL |
Ga0075480_105011171 | 3300008012 | Aqueous | METNMNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNKLGGISYEKLC |
Ga0111541_103569361 | 3300008097 | Marine | MNSEQIIRLNKEALYSSLTSSDKFGRFFNKSILHYAAIMEVFS |
Ga0103826_1072511 | 3300009338 | River Water | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIMEVFSC |
Ga0129351_11401982 | 3300010300 | Freshwater To Marine Saline Gradient | MNAEEIINLNKQALYSSLTSSDIFGKFFNKSILHYAAIME |
Ga0129352_105649871 | 3300012528 | Aqueous | MNAEEIIKLNKQALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNKLGGISYEKL |
Ga0129352_106932762 | 3300012528 | Aqueous | MNAEEIIKLNKDALYSSLTSTDIFGKFFNKSILHYAAVMEIFSTNKLGGISYEKLCH |
Ga0163111_110402481 | 3300012954 | Surface Seawater | MNAEEIINFNKKALYSSITSTNTSSRFFNKSILHY |
Ga0163111_114686931 | 3300012954 | Surface Seawater | MNAEEIINFNKKALYSSLTSTNTSSRFFNKSILHYAATMEIFSFTKTGGISYEKL |
Ga0163111_120390351 | 3300012954 | Surface Seawater | MNAEEIIKLNKTALYSSLESTNVFVKFFNKSILHNAVVMEIFSNNIFNGIS |
Ga0116816_10576371 | 3300014030 | Marine | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIMEVFSCNRLGGISY |
Ga0182056_11703232 | 3300016729 | Salt Marsh | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIM |
Ga0182042_12644411 | 3300016733 | Salt Marsh | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAI |
Ga0181392_10159021 | 3300017749 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAVMEIFSTNKLGGISYEKLCHS |
Ga0181395_11499342 | 3300017779 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAVMEIFSTNKLG |
Ga0181571_105488832 | 3300017957 | Salt Marsh | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIMEVFSCNRLGGISYEKLCHSIPKSLG |
Ga0181581_101409081 | 3300017962 | Salt Marsh | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIMEVFS |
Ga0181587_103691021 | 3300017968 | Salt Marsh | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIMEVFSCNR |
Ga0181563_102164771 | 3300018420 | Salt Marsh | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNKLGGISYEKLCHSI |
Ga0181562_102172732 | 3300019459 | Salt Marsh | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSFNK |
Ga0181595_103931961 | 3300020053 | Salt Marsh | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNKLGGISYEKLCHSIPKSLEY |
Ga0181599_13434292 | 3300020178 | Salt Marsh | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYA |
Ga0181604_101288821 | 3300020191 | Salt Marsh | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNKLGGI |
Ga0181604_102400571 | 3300020191 | Salt Marsh | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSFNKLG |
Ga0181597_102100322 | 3300020194 | Salt Marsh | MNAEEIINLNKKALYSSLTSSNIFGKFFNKSILHYAAIMEVFSFNKLGGISYEKLCYS |
Ga0211492_11007242 | 3300020238 | Marine | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEVFSFNKI |
Ga0211671_11031811 | 3300020270 | Marine | MNSEQIIRLNKEALYSTLTSSDKFGRFFNKSILHYAAIMEVFSYNKLEGISYEKLCINIPKS |
Ga0211634_11291152 | 3300020279 | Marine | MFNWGKIMNAEEIIKLNKEALYSSLSSSDKFGKFFNKSILHYATIMEVFS |
Ga0211491_10284732 | 3300020318 | Marine | MNAEEIIKLNKEALYASLTSTDTFGKFFNKSILHYAAIMEVFSFNKLGGISYEKLCHSIPKSL |
Ga0211493_12120392 | 3300020363 | Marine | MNAEEIIKLNKEALYSSLTSSNKFGKFFNKSILHYATIMEVFSYNKLEGI |
Ga0211652_102732951 | 3300020379 | Marine | MNAEEIIKLKKNALYTSLESKNFFGKFFYKSILHYVVILEVFSKNNLDGISYEKLCS |
Ga0211518_101346462 | 3300020440 | Marine | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAIMEVFSSNKLGGISYEKLCHSIPKSLGSRS |
Ga0211545_104585512 | 3300020452 | Marine | MNAEEIINFNKKTLYSSITSSDVSSRFFNKSFLHYAASMEIFSFTKMGGISYEKLCLNIPKTLGS |
Ga0211545_105366411 | 3300020452 | Marine | MNSEQIIKLNKEALYSTLTSSDKFGRFFNKSILHYAAIMEVFSYNKLDG |
Ga0211548_106520761 | 3300020454 | Marine | MNAEEIINFNKKALYSSLTSSDISSRFFNKSLLHYAASMEI |
Ga0211643_106787431 | 3300020457 | Marine | MDAEEIIKLKKNALYSSLESTDLFGRFFNKSILHNAVIMEIFSNNNIDGI |
Ga0211514_100053551 | 3300020459 | Marine | MNAEEIINFNKKALYSSLTGTDTSSRFFNKSILHYAASMEIFSFN |
Ga0211694_104826302 | 3300020464 | Marine | MNAEEIIKLKKNALYSSLESKDLFGKFFNKSMLHYAVIMEVFSKNNFDGISYEKLCGNVPKVLGSRS |
Ga0211541_100830612 | 3300020475 | Marine | MNAEEIINFNKKALYSSLTSSDISSRFFNKSLLHY |
Ga0181598_12944891 | 3300020810 | Salt Marsh | MNAEEIINLNKKALYSSLTSSNIFGKFFNKSILHYAA |
Ga0213862_102597692 | 3300021347 | Seawater | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAI |
Ga0213862_103155832 | 3300021347 | Seawater | MNAEEIIKLNKQALYFSLTSSDIFGKFFNKSILHYAAIMEVFSFNKLGGISY |
Ga0213868_105131712 | 3300021389 | Seawater | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSLNKLGGISYEKLCH |
Ga0213866_104366662 | 3300021425 | Seawater | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSFNKLGGISYEKLCHSIPKSLGS |
Ga0255753_11392692 | 3300022926 | Salt Marsh | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSFNKLGGISYEKLCHSIP |
Ga0255774_102328482 | 3300023087 | Salt Marsh | MNSEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIMEVFSCNRL |
Ga0255784_102137811 | 3300023108 | Salt Marsh | MNAEEIIKLNKKALYESLSSSDKFGKFFNKSILHNAAIMEVFSCNRLGGISYEKLCYSIPKSLGS |
Ga0255743_102893622 | 3300023110 | Salt Marsh | MNAEEIIKLNKKALYESLSNSDKFGKFYNKSILHNAAIMEVFSCNRLGGIS |
Ga0228683_10175911 | 3300023694 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHY |
Ga0228684_10356401 | 3300023704 | Seawater | MNAEEIIKLNKDALYSSLTSTDIFGKFFNKSILHYAA |
Ga0228637_10353291 | 3300024192 | Seawater | MNAEEIIKLNKDALYSSLTSTDIFGKFFNKSILHYAAIMEIFSSNKLGGISYEKLCHSIPKSLGS |
Ga0228633_11456622 | 3300024228 | Seawater | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNKL |
Ga0228678_10497591 | 3300024244 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAIMEIFSSNKLGGISYEKLCHSIPKSLGSRS |
Ga0233398_11279621 | 3300024320 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAVMEIFSTNKLGGISYEKLCHSIPKSLGSRS |
Ga0228626_10201912 | 3300024321 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAIMEIFSSNKLGGISYEKLCHSIPKSLGSRSS |
Ga0233393_10963752 | 3300024413 | Seawater | MNAEEIIKLNKDALYSSLTSTDIFGKFFNKSILHYAAIMEIFSSNKLGGISYEKLC |
Ga0209663_10072381 | 3300025672 | Marine | MNAEEIIKLMKKALYSSIKSPEIFGKFFNKSILHNAVVMEIFSNNINGICYEKLCFNIPK |
Ga0209558_10279543 | 3300025729 | Marine | MNAEEIIKLMKKALYSSIKSPEIFGKFFNKSILHNAVVMEIFSNNINGICYEKLCFNIPKSLGSRS |
Ga0209362_10120801 | 3300025770 | Marine | MNAEEIIKLMKKALYSSIKSPEIFGKFFNKSILHNAVVM |
Ga0208425_10527002 | 3300025803 | Aqueous | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSFNKLGGISYEKLCHSIPKSL |
Ga0209630_102189491 | 3300025892 | Pelagic Marine | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEIFSFNKLGGI |
Ga0247606_10237751 | 3300026398 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYA |
Ga0247580_10571921 | 3300026423 | Seawater | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNKLGGIS |
Ga0247559_10357372 | 3300026443 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAVMEIFS |
Ga0247607_10650481 | 3300026447 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAIMEIFSSNKL |
Ga0247568_10487171 | 3300026462 | Seawater | MNAEEIIKLNKDALYSSLTSTDSFGKFFNKSILHYAAIMEIFSSNKLGGISYEKLCH |
Ga0228622_11212202 | 3300026479 | Seawater | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEV |
Ga0247592_10525921 | 3300026500 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAIMEIFFI |
Ga0247590_10174991 | 3300026513 | Seawater | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNK |
Ga0228607_10496582 | 3300026517 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAIMEIFSSNKLGGISY |
Ga0208941_10242102 | 3300027077 | Marine | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAVMEIFST |
Ga0247576_10566881 | 3300028099 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAVMEIFSTNKLGGISYEKLCH |
Ga0247596_10894242 | 3300028106 | Seawater | MNAEEIIKLNKDALYSSLTSTDIFGKFFNKSILHYAAIMEIFSSNKLGGISYEKLCHSIP |
Ga0228642_10770942 | 3300028131 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAVMEIFSTNKLGGISYEILCHSIP |
Ga0256417_10558181 | 3300028233 | Seawater | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNKLGGISYEKLCHSIPKSLG |
Ga0256413_11471111 | 3300028282 | Seawater | MNVEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAVMEIFSTNKLGGISYEKLCH |
Ga0247601_10210671 | 3300028330 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHNAVIMEIFINNSKGIS |
Ga0247583_10801661 | 3300028336 | Seawater | MNAEEIIKLNKDALYSSLTSTDIFGKFLNKSILHYA |
Ga0257132_10209891 | 3300028671 | Marine | MNAEEIIKLNKEVLYSSLTSTDTFGKFFNKSILHYAAIMEVFSSNKL |
Ga0315331_101817771 | 3300031774 | Seawater | MNAEEIINFNKKALYSSLTGTDTSSRFFNKSILHYAAS |
Ga0315320_102575381 | 3300031851 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAVMEIFSTNKLGGISYEKLCHSIP |
Ga0315320_107550041 | 3300031851 | Seawater | MNAEEIIKLKKKALYSSIKSPEIFGKFFNKSILHNAVVMEIFSNNINGISYEKLCFNI |
Ga0315330_100943591 | 3300032047 | Seawater | MNAEEIIKLNKEALYSSLTSTDTFGKFFNKSILHYAAIMEVFSFNKIGGISYEKLCHSIPKA |
Ga0315330_105893851 | 3300032047 | Seawater | MNAEEIIKLNKDALYSSLTSTDTFGKFFNKSILHYAAI |
Ga0315315_109644092 | 3300032073 | Seawater | MSPEEIIKLNKEFLYSSFTSNDNFSKFFNKSILHYVAIMELFFYNKTEGIS |
Ga0315315_116485732 | 3300032073 | Seawater | MNAEEIINFNKKALYSSLTGTDTSSRFFNKSILHYAASMEIFSYNKTGGISYEKLCLSIPKTL |
Ga0315321_102618891 | 3300032088 | Seawater | MNAEEIIKLNKEALYSSLTSSDIFGKFFNKSILHYAAIMEVFSFNKLGGISYEKLCHS |
⦗Top⦘ |