NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105172

Metagenome / Metatranscriptome Family F105172

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105172
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 45 residues
Representative Sequence MTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKIYKRKKNK
Number of Associated Samples 74
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.00 %
% of genes near scaffold ends (potentially truncated) 34.00 %
% of genes from short scaffolds (< 2000 bps) 82.00 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (42.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(29.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(59.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.53%    β-sheet: 0.00%    Coil/Unstructured: 42.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF06067DUF932 5.00
PF00041fn3 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.00 %
UnclassifiedrootN/A42.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002408|B570J29032_109820318All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1468Open in IMG/M
3300005517|Ga0070374_10447914Not Available647Open in IMG/M
3300005525|Ga0068877_10689985All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage547Open in IMG/M
3300005527|Ga0068876_10004159Not Available10226Open in IMG/M
3300005662|Ga0078894_10187059All Organisms → Viruses → Predicted Viral1872Open in IMG/M
3300005662|Ga0078894_10302243All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1451Open in IMG/M
3300005662|Ga0078894_10530577All Organisms → Viruses → Predicted Viral1054Open in IMG/M
3300005662|Ga0078894_10556626All Organisms → Viruses → Predicted Viral1025Open in IMG/M
3300005662|Ga0078894_11216616All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage637Open in IMG/M
3300005662|Ga0078894_11766527Not Available505Open in IMG/M
3300006484|Ga0070744_10066159All Organisms → Viruses → Predicted Viral1052Open in IMG/M
3300006484|Ga0070744_10180618Not Available602Open in IMG/M
3300006639|Ga0079301_1139881All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage720Open in IMG/M
3300006641|Ga0075471_10072734Not Available1877Open in IMG/M
3300006641|Ga0075471_10201866Not Available1035Open in IMG/M
3300006641|Ga0075471_10202558All Organisms → Viruses → Predicted Viral1033Open in IMG/M
3300006641|Ga0075471_10413259Not Available676Open in IMG/M
3300006875|Ga0075473_10065539All Organisms → Viruses → Predicted Viral1415Open in IMG/M
3300006875|Ga0075473_10203828All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage798Open in IMG/M
3300007559|Ga0102828_1143732Not Available596Open in IMG/M
3300007560|Ga0102913_1211972Not Available621Open in IMG/M
3300007617|Ga0102897_1228639Not Available553Open in IMG/M
3300007708|Ga0102859_1201091All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage592Open in IMG/M
3300008107|Ga0114340_1234637Not Available574Open in IMG/M
3300008110|Ga0114343_1139908All Organisms → Viruses → Predicted Viral2111Open in IMG/M
3300008111|Ga0114344_1024607All Organisms → Viruses → Predicted Viral2423Open in IMG/M
3300008111|Ga0114344_1036059All Organisms → Viruses → Predicted Viral2713Open in IMG/M
3300008111|Ga0114344_1080918All Organisms → Viruses → Predicted Viral1824Open in IMG/M
3300008113|Ga0114346_1209227Not Available770Open in IMG/M
3300008116|Ga0114350_1170805Not Available574Open in IMG/M
3300008120|Ga0114355_1130027All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage930Open in IMG/M
3300008261|Ga0114336_1104179All Organisms → Viruses → Predicted Viral1928Open in IMG/M
3300008262|Ga0114337_1316532Not Available548Open in IMG/M
3300008266|Ga0114363_1201097Not Available611Open in IMG/M
3300008448|Ga0114876_1101576All Organisms → Viruses → Predicted Viral1144Open in IMG/M
3300008953|Ga0104241_1000632All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2826Open in IMG/M
3300008996|Ga0102831_1109005All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage921Open in IMG/M
3300009081|Ga0105098_10731127All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage528Open in IMG/M
3300010354|Ga0129333_11141030Not Available649Open in IMG/M
3300010370|Ga0129336_10671298Not Available550Open in IMG/M
3300010374|Ga0114986_1104176Not Available514Open in IMG/M
3300011381|Ga0102688_1635839All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage894Open in IMG/M
3300014050|Ga0119952_1081934All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage787Open in IMG/M
3300019146|Ga0188881_10012585All Organisms → Viruses → Predicted Viral1043Open in IMG/M
3300020162|Ga0211735_10606238Not Available861Open in IMG/M
3300020519|Ga0208223_1007921All Organisms → Viruses → Predicted Viral1789Open in IMG/M
3300021140|Ga0214168_1015231All Organisms → Viruses → Predicted Viral2266Open in IMG/M
3300021962|Ga0222713_10089747All Organisms → Viruses → Predicted Viral2227Open in IMG/M
3300021962|Ga0222713_10133714All Organisms → Viruses → Predicted Viral1733Open in IMG/M
3300021962|Ga0222713_10209310All Organisms → Viruses → Predicted Viral1298Open in IMG/M
3300021962|Ga0222713_10632402Not Available620Open in IMG/M
3300021963|Ga0222712_10064488All Organisms → Viruses → Predicted Viral2671Open in IMG/M
3300022747|Ga0228703_1023346All Organisms → Viruses → Predicted Viral1950Open in IMG/M
3300022752|Ga0214917_10007613Not Available10900Open in IMG/M
3300022752|Ga0214917_10289299Not Available736Open in IMG/M
3300023174|Ga0214921_10011400Not Available10810Open in IMG/M
3300024289|Ga0255147_1000435Not Available12174Open in IMG/M
3300024289|Ga0255147_1002771All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4193Open in IMG/M
3300024289|Ga0255147_1004573All Organisms → Viruses → Predicted Viral3186Open in IMG/M
3300024289|Ga0255147_1053572All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage780Open in IMG/M
3300024289|Ga0255147_1062007Not Available714Open in IMG/M
3300024306|Ga0255148_1023211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1021177Open in IMG/M
3300024346|Ga0244775_10569191All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage921Open in IMG/M
3300024348|Ga0244776_10261702All Organisms → Viruses → Predicted Viral1198Open in IMG/M
3300024348|Ga0244776_10820360All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage560Open in IMG/M
3300024350|Ga0255167_1029423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1021023Open in IMG/M
3300024354|Ga0255171_1066365Not Available661Open in IMG/M
3300024481|Ga0256330_1052285Not Available870Open in IMG/M
3300024496|Ga0255151_1032047All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage893Open in IMG/M
3300024500|Ga0255143_1014919All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Eikenella → unclassified Eikenella → Eikenella sp. HMSC061C021316Open in IMG/M
3300024574|Ga0255275_1063406All Organisms → Viruses → Predicted Viral1035Open in IMG/M
3300024867|Ga0255267_1086333Not Available726Open in IMG/M
3300024867|Ga0255267_1154677Not Available528Open in IMG/M
3300025732|Ga0208784_1016285Not Available2458Open in IMG/M
3300025732|Ga0208784_1026711Not Available1851Open in IMG/M
3300025848|Ga0208005_1155437Not Available713Open in IMG/M
3300026455|Ga0255155_1022572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1021128Open in IMG/M
3300026459|Ga0255170_1002156All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5043Open in IMG/M
3300026478|Ga0255156_1088484Not Available546Open in IMG/M
3300026570|Ga0255274_1054005All Organisms → Viruses → Predicted Viral1056Open in IMG/M
3300027121|Ga0255074_1003816All Organisms → Viruses → Predicted Viral2148Open in IMG/M
3300027141|Ga0255076_1033722Not Available915Open in IMG/M
3300027153|Ga0255083_1087850Not Available581Open in IMG/M
3300027488|Ga0255084_1038621Not Available884Open in IMG/M
3300027529|Ga0255077_1031680All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage970Open in IMG/M
3300027631|Ga0208133_1089068Not Available724Open in IMG/M
3300027793|Ga0209972_10148402All Organisms → Viruses → Predicted Viral1126Open in IMG/M
3300027805|Ga0209229_10510550Not Available512Open in IMG/M
3300028091|Ga0255184_1100251Not Available535Open in IMG/M
3300028103|Ga0255172_1062146Not Available679Open in IMG/M
3300031857|Ga0315909_10215353All Organisms → Viruses → Predicted Viral1507Open in IMG/M
3300031857|Ga0315909_10266123All Organisms → Viruses → Predicted Viral1304Open in IMG/M
3300031857|Ga0315909_10325975All Organisms → Viruses → Predicted Viral1134Open in IMG/M
3300031963|Ga0315901_10207857All Organisms → Viruses → Predicted Viral1688Open in IMG/M
3300031963|Ga0315901_10318765All Organisms → Viruses → Predicted Viral1280Open in IMG/M
3300032050|Ga0315906_10011128Not Available10513Open in IMG/M
3300032093|Ga0315902_10228482All Organisms → Viruses → Predicted Viral1834Open in IMG/M
3300033816|Ga0334980_0000111All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes39255Open in IMG/M
3300034118|Ga0335053_0526540Not Available692Open in IMG/M
3300034166|Ga0335016_0461456All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage725Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater25.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake12.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton11.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous9.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater7.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine7.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water5.00%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine4.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater2.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.00%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface2.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater1.00%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment1.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006639Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11EnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007560Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02EnvironmentalOpen in IMG/M
3300007617Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02EnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008111Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008261Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NAEnvironmentalOpen in IMG/M
3300008262Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008953Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT4EnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010374Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17EnvironmentalOpen in IMG/M
3300011381Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300019146Metatranscriptome of marine microbial communities from Baltic Sea - GS860_ls5EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020519Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300021140Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnionEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022747Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MGEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300024289Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8hEnvironmentalOpen in IMG/M
3300024306Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8hEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024350Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8dEnvironmentalOpen in IMG/M
3300024354Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8dEnvironmentalOpen in IMG/M
3300024481Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024496Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8hEnvironmentalOpen in IMG/M
3300024500Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0hEnvironmentalOpen in IMG/M
3300024574Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024867Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025732Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025848Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026455Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8hEnvironmentalOpen in IMG/M
3300026459Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8dEnvironmentalOpen in IMG/M
3300026478Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8hEnvironmentalOpen in IMG/M
3300026570Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027121Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8hEnvironmentalOpen in IMG/M
3300027141Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepB_8hEnvironmentalOpen in IMG/M
3300027153Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8hEnvironmentalOpen in IMG/M
3300027488Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_8dEnvironmentalOpen in IMG/M
3300027529Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8hEnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027793Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300028091Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_0hEnvironmentalOpen in IMG/M
3300028103Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8dEnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300034118Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165EnvironmentalOpen in IMG/M
3300034166Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
B570J29032_10982031833300002408FreshwaterMTLELNNYGLEFDTYVCYIAIAWQVLIPTTLALIAYKIYKVRKTK*
Ga0070374_1044791433300005517Freshwater LakeMTIELNDYGFVFDTYVCYIALSWQFLAPVAVALIAYKIYKRKKNK*
Ga0068877_1068998533300005525Freshwater LakeMTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKIYKWKKNN*
Ga0068876_1000415923300005527Freshwater LakeMTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKVYKRMRVK*
Ga0078894_1018705933300005662Freshwater LakeMTIELNDYGFVFDTYVCYIALSWQFLAPATIALIAYKIYKRKKNK*
Ga0078894_1030224343300005662Freshwater LakeMTLELNDYGLEFDTYVCYIALSWQVLIPSAIALIAYKIYKRKKNK*
Ga0078894_1053057753300005662Freshwater LakeMTLKLNDYGLEFDTYVCYIALSWQVIIPATIALIAYKIYKRKK
Ga0078894_1055662663300005662Freshwater LakeMTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKIYKRKK
Ga0078894_1121661633300005662Freshwater LakeMTIRLNDYGFELDTYICYIALSWQILIPATIALIAYKFYKRKKNK*
Ga0078894_1176652723300005662Freshwater LakeMTIELNDYGFVFDTYVCYIALSWQFLIPASIVLIGYKVIKRKKNK*
Ga0070744_1006615953300006484EstuarineMTIELNDYGFCLDTYVCYIALSWQVLIPATIALIAYKIIKR
Ga0070744_1018061813300006484EstuarineMTIELNDYGFVFDTYVCYIALSWQFLAPATIALIAYKIIKRKKNK*
Ga0079301_113988123300006639Deep SubsurfaceMTLELNDYGLEFDTYVCYIALSWQILIPATIALIAYKIYKWKKNN*
Ga0075471_1007273423300006641AqueousMTIELNDYGFEFDTYVAYIALSWQVLIPATIAIVAYKVYKRLRDK*
Ga0075471_1020186623300006641AqueousMTLELNDYGFEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKITK*
Ga0075471_1020255813300006641AqueousMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKITK*
Ga0075471_1041325913300006641AqueousGLEFDTYVCYIALSWQILIPATIALIAYKFYKRKKNK*
Ga0075473_1006553943300006875AqueousMTIELNEYGFEFDTYIAYIALSWQVIIPAAILFIGYKFYKMKGKKK*
Ga0075473_1020382813300006875AqueousMTLELNDYGFEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKIT
Ga0102828_114373223300007559EstuarineMTLELNDYGLEFDTYVCYIALSWQVIVPALISVIAYKIYKRKKNK*
Ga0102913_121197233300007560EstuarineMTLELNDYGLEFDTYVCYIALSWQVIIPALISVIAYKIYKRKKNK*
Ga0102897_122863913300007617EstuarineMTLELNDYGFEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNK*
Ga0102859_120109133300007708EstuarineMTIELNDYGFVFDTYVCYIALSWQFLIPASIVLIAYKVIKRKKN
Ga0114340_123463723300008107Freshwater, PlanktonMTLELNDYGLEFDTYVCYIALSWQVLIPATIAIIAYKIYKRKKNN*
Ga0114343_113990833300008110Freshwater, PlanktonMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNN*
Ga0114344_102460743300008111Freshwater, PlanktonMTLELNDYGLEFDTYICYIALSWQILIPATIALIAYKFYKRKKNK*
Ga0114344_1036059103300008111Freshwater, PlanktonMTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKIIKRKKNK*
Ga0114344_108091853300008111Freshwater, PlanktonMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNI*
Ga0114346_120922713300008113Freshwater, PlanktonMTIRLNDYGFELDTYICYIALSWQILIPATIALIAYKFYKRKKN
Ga0114350_117080523300008116Freshwater, PlanktonYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNN*
Ga0114355_113002733300008120Freshwater, PlanktonMTIRLNDYGFELDTYICYIALSWQILTPATIALIAYKFYKRK
Ga0114336_110417953300008261Freshwater, PlanktonMTLELNDYGLEFDTYVCYIALSWQVIIPVTIALIAYKVYKRMRVK*
Ga0114337_131653223300008262Freshwater, PlanktonMTLELNDYGLEFDTYVCYIALSWQILIPATIALVVYKKNQW*
Ga0114363_120109713300008266Freshwater, PlanktonLGDIRIMTLELNDYGLEFDTYVCYIALSWQVLIPATIAIIAYKIYKRKKNN*
Ga0114876_110157643300008448Freshwater LakeMTIRLNDYGFELDTYICYIALSWQILIPATIALIAY
Ga0104241_100063253300008953FreshwaterMTLELNDYGLEFDTYVCYIALSWQVIVPAVIALIAYKIYKRKKNK*
Ga0102831_110900533300008996EstuarineMTIELNEYGLEFDTYVCYIALSWQVIIPALISVIAYKIYKRKKNK*
Ga0105098_1073112713300009081Freshwater SedimentMTIELNDYGFVFDTYVCYIALSWQFLAPATIALIAYKIYKRKKAK*
Ga0129333_1114103033300010354Freshwater To Marine Saline GradientMKLELNDYGLEFDTYVCYIALSWQVLIPATLALIAYKIYKWKKNN*
Ga0129336_1067129813300010370Freshwater To Marine Saline GradientRTNTRLGDIRIMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNN*
Ga0114986_110417623300010374Deep SubsurfaceMTIELNDYGFVFDTYVCYIALSWQFLAPVAVALIAYKIYK
Ga0102688_163583913300011381Freshwater LakeMTLELNDYGLEFDTYICYIALSWQILIPATIALIAYK
Ga0119952_108193443300014050FreshwaterMTLELNDYGLEFDTYVCYIALSWQILIPATIALIAYKIYKRKKNKYDY*
Ga0188881_1001258523300019146Freshwater LakeMTLRLNDYGLEFDTYVCYIALSWQILIPATIALIAYKIYKWKKNK
Ga0211735_1060623833300020162FreshwaterGLEFDTYVCYIALSWQVIIPALISVIAYKIYKRKKNK
Ga0208223_100792123300020519FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNN
Ga0214168_101523143300021140FreshwaterMTLRINDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKITK
Ga0222713_1008974743300021962Estuarine WaterMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKITK
Ga0222713_1013371453300021962Estuarine WaterMTLELNDYGLEFDTYICYIALSWQVIIPATIALIAYKVYKRMRVK
Ga0222713_1020931013300021962Estuarine WaterMTLELNDYGLEFDTYICYIALSWQILIPATIALIAYKIYKW
Ga0222713_1063240223300021962Estuarine WaterMTIELNDYGFVFDTYVCYIALSWQFLAPVAVALIAYKIYKRKKNK
Ga0222712_10064488103300021963Estuarine WaterMTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKVYKRMRVK
Ga0228703_102334643300022747FreshwaterMTLELNDYGLEFDTYVCYIALSWQVIVPAVIALIAYKIYKRKKNK
Ga0214917_10007613303300022752FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRMKNKNVY
Ga0214917_1028929923300022752FreshwaterMTIELNDYGFELDTYVAYIALSWQVLIPALIVFIGYKIYKRKQRVF
Ga0214921_10011400103300023174FreshwaterMTLELNDYGLEFDTYVCYIALSWQILIPATIALIAYKIYKRKKNK
Ga0255147_1000435333300024289FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPALIIGIGYKIYKMKGKKK
Ga0255147_1002771103300024289FreshwaterMTLELNDYGLEFDTYVAYIALSWQVIVPATIALIAYKIYKKMKNKNVY
Ga0255147_100457383300024289FreshwaterMTLELNDYGLEFDTYVCYIALSWQILIPATLALIAYKIYKRKKNKNVF
Ga0255147_105357243300024289FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRMKNK
Ga0255147_106200713300024289FreshwaterMTLELNDYGLEFDTYVAYIALSWQVLIPATIALIAYKIYKRMKNKNVY
Ga0255148_102321133300024306FreshwaterMTLELNGYGLEFDTYVAYIALSWQVLIPATIALIAYKIYKRMKNKNVY
Ga0244775_1056919133300024346EstuarineMTIELNEYGLEFDTYVCYIALSWQVIIPALISVIAYKIYKRKKNK
Ga0244776_1026170243300024348EstuarineMTLELNDYGLEFDTYVCYIALSWQILIPATLALIAYKIYKRKKNN
Ga0244776_1082036043300024348EstuarineMTIELNDYGFVFDTYVCYIALSWQFLVPATLALIAYKIY
Ga0255167_102942333300024350FreshwaterTKIKMTLELNDYGLEFDTYVAYIALSWQVIVPATIALIAYKIYKRMKNKNVY
Ga0255171_106636513300024354FreshwaterLELNDYGLEFDTYVCYIALSWQVIIPAVIALVAYKIYKRKKNKXVLIAY
Ga0256330_105228533300024481FreshwaterMTLELNDYGLEFDTYVAYIALSWQVIVPATIALIAYKIYKRMKNKNVY
Ga0255151_103204743300024496FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIY
Ga0255143_101491953300024500FreshwaterKIKMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRMKNKNVY
Ga0255275_106340613300024574FreshwaterMTLELNDYGLEFDTYVAYIALSWQVIIPALIIGIGYKI
Ga0255267_108633333300024867FreshwaterMTLELNDYGLEFDTYVCYIALSWQVIIPAAIALIAYKIYKKMKNKNVY
Ga0255267_115467723300024867FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPALIIGIGYKIYKVRKNKYDF
Ga0208784_1016285103300025732AqueousMTLELNDYGFEFDTYVCYIALSWQVLIPATIAIIAYKIYKRKKITK
Ga0208784_102671163300025732AqueousMTIELNDYGFEFDTYVAYIALSWQVLIPATIAIVAYKVYKRLRDK
Ga0208005_115543713300025848AqueousMTLELNDYGFEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKI
Ga0255155_102257233300026455FreshwaterMTLELNDYGLEFDTYVAYIALSWQVIIPALIIGIGYKIYKVRKNKYDF
Ga0255170_1002156143300026459FreshwaterMTLELNDYGLEFDTYVAYIALSWQVLIPATIALIAYKIYKKMKNKNVY
Ga0255156_108848423300026478FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPAAIALIAYKIYKKRNKKKXR
Ga0255274_105400513300026570FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRMKNKN
Ga0255074_100381663300027121FreshwaterMTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKIYKRKKITK
Ga0255076_103372233300027141FreshwaterMTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKIYKRKKITKXTAY
Ga0255083_108785013300027153FreshwaterLELNDYGFEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNK
Ga0255084_103862113300027488FreshwaterLNDYGLEFDTYVCYIALSWQVIIPATIALIAYKIYKRKKITRXVLIAY
Ga0255077_103168013300027529FreshwaterMTLELNDYGFEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNK
Ga0208133_108906813300027631EstuarineMTIELNDYGFVFDTYVCYIALSWQFLAPATIALIAYKIIKRKKNK
Ga0209972_1014840213300027793Freshwater LakeMTLELNDYGLEFDTYICYIALSWQILIPATIALIAYKFYK
Ga0209229_1051055023300027805Freshwater And SedimentELNDYGLEFDTYICYIALSWQVIIPATIGLIAYKVYKRMRVK
Ga0255184_110025123300028091FreshwaterMTLELNDYGLEFDTYVAYIALSWQVIVPATIALIAYKI
Ga0255172_106214613300028103FreshwaterMTLELNDYGLEFDTYVCYIALSWQVIIPAVIALVAYKIYKRKTKKK
Ga0315909_1021535313300031857FreshwaterLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNI
Ga0315909_1026612353300031857FreshwaterLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKNN
Ga0315909_1032597513300031857FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPATIALIAYKIYKRKKN
Ga0315901_1020785753300031963FreshwaterMTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKIYKRKKNK
Ga0315901_1031876523300031963FreshwaterMTIRLNDYGFELDTYICYIALSWQILIPATIALIAYKFYKRKKNK
Ga0315906_10011128273300032050FreshwaterRSRGKVMTLELNDYGLEFDTYVCYIALSWQVIIPATIALIAYKVYKRMRVK
Ga0315902_1022848253300032093FreshwaterMTLELNDYGLEFDTYVCYIALSWQVLIPATIAIIAYKIYKRKKNN
Ga0334980_0000111_32603_327403300033816FreshwaterMTIELNDYGFVFDTYVCYIALSWQFLAPATIALIAYKIYKRKKAK
Ga0335053_0526540_30_1673300034118FreshwaterMTIELNDYGFVFDTYVCYIALSWQFLAPATIALIAYKIYKRKKAN
Ga0335016_0461456_241_3783300034166FreshwaterMTLELNNYGLEFDTYVCYIAIAWQVLIPTTLALIAYKIYKVRKTK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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