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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105127 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 63 residues |
| Representative Sequence | MTTLTMRVIKGDFIVTGPDVEPMKFKSRSEARDWCKTHHPGSPITEIGPGGKRAAPKKPPERPSR |
| Number of Associated Samples | 74 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 78.00 % |
| % of genes near scaffold ends (potentially truncated) | 30.00 % |
| % of genes from short scaffolds (< 2000 bps) | 99.00 % |
| Associated GOLD sequencing projects | 73 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.58 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (84.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (42.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (35.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (45.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 11.83% β-sheet: 23.66% Coil/Unstructured: 64.52% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.58 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF01068 | DNA_ligase_A_M | 6.00 |
| PF13586 | DDE_Tnp_1_2 | 1.00 |
| PF04365 | BrnT_toxin | 1.00 |
| PF07793 | DUF1631 | 1.00 |
| PF05239 | PRC | 1.00 |
| PF04120 | Iron_permease | 1.00 |
| PF00816 | Histone_HNS | 1.00 |
| PF00353 | HemolysinCabind | 1.00 |
| PF10691 | DUF2497 | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG1423 | ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family | Replication, recombination and repair [L] | 6.00 |
| COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 6.00 |
| COG2916 | DNA-binding protein H-NS | Transcription [K] | 1.00 |
| COG2929 | Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system | Defense mechanisms [V] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 84.00 % |
| All Organisms | root | All Organisms | 16.00 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 42.00% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 7.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 5.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 5.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.00% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 3.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.00% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 2.00% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 2.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.00% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.00% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 1.00% |
| Soil | Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 1.00% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2170459010 | Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!) | Environmental | Open in IMG/M |
| 3300000787 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005165 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMC | Environmental | Open in IMG/M |
| 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
| 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
| 3300006576 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006605 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006953 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
| 3300010036 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26 | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012938 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015 | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017965 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T | Environmental | Open in IMG/M |
| 3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
| 3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300020005 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2 | Environmental | Open in IMG/M |
| 3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
| 3300021510 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex | Environmental | Open in IMG/M |
| 3300022694 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028717 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158 | Environmental | Open in IMG/M |
| 3300028719 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182 | Environmental | Open in IMG/M |
| 3300028720 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357 | Environmental | Open in IMG/M |
| 3300028721 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355 | Environmental | Open in IMG/M |
| 3300028722 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368 | Environmental | Open in IMG/M |
| 3300028754 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157 | Environmental | Open in IMG/M |
| 3300028768 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119 | Environmental | Open in IMG/M |
| 3300028771 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369 | Environmental | Open in IMG/M |
| 3300028778 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142 | Environmental | Open in IMG/M |
| 3300028793 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159 | Environmental | Open in IMG/M |
| 3300028807 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186 | Environmental | Open in IMG/M |
| 3300028811 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149 | Environmental | Open in IMG/M |
| 3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
| 3300028824 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197 | Environmental | Open in IMG/M |
| 3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
| 3300028876 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140 | Environmental | Open in IMG/M |
| 3300028878 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117 | Environmental | Open in IMG/M |
| 3300028881 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300030903 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031091 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031198 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S | Environmental | Open in IMG/M |
| 3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| F62_06365460 | 2170459010 | Grass Soil | MFIGIGHACVSDETTLTMRLVKGHFIVSGPDVEPMKFKNRREARDWCKTHHPGSPITEVGPGGKRAPRKKPVR |
| F62_05078480 | 2170459010 | Grass Soil | MTTLTMRLVKDDFIVTGPDIEPMQFKSRREARDWCKAQIGPGGKRAPKKLLERRDG |
| F62_08663750 | 2170459010 | Grass Soil | MTTLTMRMIKGDFVVTGPDVEPMKFKSRREAKDWCAKHRPGSPVEEIGPKRATKQRPKTGRGG |
| JGI11643J11755_118285621 | 3300000787 | Soil | MTTLTMRVVKGDFIVTRPDIAPMKFKTRPEARDWCKTHHPGSPVTEIGPGGKRTAAKKPPER |
| Ga0062594_1005321772 | 3300005093 | Soil | MIAVAPKGDFVVTGPDVEPMRFKSRAEARDWCKAHHPGSPITEVGPGGKRAAKKPLPKNQRR* |
| Ga0066869_100029991 | 3300005165 | Soil | MTTLTMRLVKGDFIVTGPDVEPMKFKSRREAKDWCKAHHPGSPITEIGPSGKRAAPKKPSERPSR* |
| Ga0070700_1013199342 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTFTMRFMRGHFVVTGPDIEPMKFKSRPEARDWCKVHYPGSPITEIGPPGGKRAPPKRGVENKPR* |
| Ga0068867_1019536701 | 3300005459 | Miscanthus Rhizosphere | MTTLTMRLIKGHFIVSGPDVEPMKFKSRPEARDWCKTHHPGSPITEIGPGGKRAPRKKPVRVR* |
| Ga0068852_1023236461 | 3300005616 | Corn Rhizosphere | MRMIKGHFVVSGPDIAPMKFKSRREAKDLCKAHHPGSPITEIGPSGKRAAPKKPSERPSR |
| Ga0068861_1021558752 | 3300005719 | Switchgrass Rhizosphere | MTTLTMRLIKGHFIVSGPDVEPMKFKSRPEARDWCKTHHPGSPVTEVGPGGKRAPPRKKPPAPSR* |
| Ga0070717_112705543 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTLTMRLVTGPDIAPMKFKSRPEAHDWCKTHHPGSPVTEIGPGGKRGAAKK |
| Ga0074047_119722191 | 3300006576 | Soil | LGQGRAMTTLTMRLIKGHFIVSGPDVEPMKFKSRREAKDWCKAHHPGSPITEIGPSGKRAAPKKPSERPSR* |
| Ga0074057_120510612 | 3300006605 | Soil | MTTLTMRVVKGDFIVTGPDVEPMKFKSRREAKDWCKAHHPGSPITEIGPSGKRAAPKKPSERPSR* |
| Ga0068865_1018582711 | 3300006881 | Miscanthus Rhizosphere | MTTLTMRMVKGDFIVTGPDIEPMKFKTRREARDWCKTHHPGSPITEVGPGGKRAPKRPPERPTR* |
| Ga0074063_142492152 | 3300006953 | Soil | MTTLTMRLVKGDFIVTGPDVEPMKFKSRREAKDLCKAHHPGSPITEIGPSGKRAAPKKPSERPSR* |
| Ga0105244_105630942 | 3300009036 | Miscanthus Rhizosphere | VTVLTMRRVRNHFIVSGPDIEPMTFKTRAEARNWCREHFRGSPIHEVGPGTKKRPPPKAKKGRDG* |
| Ga0111539_122660902 | 3300009094 | Populus Rhizosphere | MTTLTMRVVKGDFVVTGPDIAPMKFKSRREAEDWCKVYHPASSITEIGAGGKR* |
| Ga0105247_116095222 | 3300009101 | Switchgrass Rhizosphere | LRQGKAMTTLTMRMIKGDFVVTGPDVEPMRFKSRAEARDWCMTHHPGSPITEVGPGGKRAAKKPLPKNQRR* |
| Ga0099792_108515041 | 3300009143 | Vadose Zone Soil | DQGIFVVTGPDVEPIKFKSRREARDWCANHHPGSPIEEIGPGGKRAAKQRPKTERAG* |
| Ga0105248_120520751 | 3300009177 | Switchgrass Rhizosphere | MTTLTMRLIKGHFIVSGPDVEPMKFKSRREARDWCKTHHPGSPITEVGPGGKRAPPKKPVR* |
| Ga0105249_128847422 | 3300009553 | Switchgrass Rhizosphere | MTTLTMRVVKGDFIVAGPDIAPMKFKTRPEARDWCKTHHPGSPITEIGPGAKSPPRKRERPR |
| Ga0126313_101664031 | 3300009840 | Serpentine Soil | MTTLSMRMIKGDFVVTGPDVEPMKFKSRREAREWCMAHHPGSPIEEIGRGGKRAAKKPLPKSDAR* |
| Ga0126305_104417762 | 3300010036 | Serpentine Soil | MTTLSMRMIKGDFVVTGPDVEPMKFKSRREAREWCMAHHPGSPIKEIGRGGKRAAKKPLPKSDAR* |
| Ga0134124_124212843 | 3300010397 | Terrestrial Soil | DFIINGPDIAPMKFKSRPEARDWCKTHHPGSPIREIGPGTKKRPPPKAKKGRDG* |
| Ga0150985_1020728102 | 3300012212 | Avena Fatua Rhizosphere | MTTLTMRLVRGDFIVTGPDIAPMKFKSRREAKDWCTVYHPASSITEIGPGGKGGAAKKSP |
| Ga0150985_1095875212 | 3300012212 | Avena Fatua Rhizosphere | MTTLTMRLVRGDFIVTGPDIAPMKFKSRPEARDWCKTHHPGSPITEIGPGGKRAPPKKRERPGREG* |
| Ga0150985_1112549731 | 3300012212 | Avena Fatua Rhizosphere | MTTFTMRVVKGYFVVTGPDIEPMKFKSRSEARDWCRTHHPGSPITEIGPGGKRAASKKPPERTNR* |
| Ga0150985_1141798512 | 3300012212 | Avena Fatua Rhizosphere | MTTLTMRLIKGDFIVTGPDVEPMKFKARREARDWCKAHHPGSPVTEIGPGGKRASKKPQSDRGPVRDGSK* |
| Ga0150985_1153280702 | 3300012212 | Avena Fatua Rhizosphere | MTTLTMRLVKGDFIVTGPDIAPMKFKSRREAEDWCKIYHPASSVTEIGPGGKRAAPKKRERPGREG* |
| Ga0150985_1160519841 | 3300012212 | Avena Fatua Rhizosphere | MIKGEFVVTGPDIEPMKFKSRPEAKDWCMTYHPGSPITEVGPGGKRKPCQRRQVEAPE* |
| Ga0150985_1192324492 | 3300012212 | Avena Fatua Rhizosphere | MTTLTMRLVKGHFIVSGPDVEPMKFKSRREARDWCKTHHPGSPITEVGPGGKRAPPKKLR |
| Ga0150984_1072304121 | 3300012469 | Avena Fatua Rhizosphere | MTTLTMRLVKGHFVVTGPDIEPMKFKSRPEAKDWCMTHHPGSPITEVGPGGKRKPPARD* |
| Ga0162651_1000436131 | 3300012938 | Soil | MTTLTMRMIKGHFVVSGPDVEPMKFKSRPEARDWCKTHHPGSPITEVGPGGKRAPPKSKGEARKR* |
| Ga0164300_103666943 | 3300012951 | Soil | LGEVAMITLTMRVVKGDFIINGPDIAPMKFKSRQEASDWCKTHHPGSPIREIGPGTKKRPPPKAKKGRDG* |
| Ga0164300_105870282 | 3300012951 | Soil | MTTLTMRLVKGDFIVTGPDVEPMKFKSRREAKDWCKAHHPGSPITEVGPGGKRAAPKKLSERPSR* |
| Ga0164303_109509873 | 3300012957 | Soil | MTTLTMRLVKGDFIVTGPDIAPMKFKSRREAEGWCKIYHPASSVTEIGPGGKRAAPQKRERPGREG* |
| Ga0164299_101282811 | 3300012958 | Soil | MTTLTMRVVKGDFIITGPDIAPMKFKSRPEARDWCRTHHPGSPITEVGPGGKRAPKKRERPGREG* |
| Ga0164299_114523391 | 3300012958 | Soil | MTTLTMRMIKGDFVVTGPDVEPMKFKSRPEARDWCKAHHPGSPITEIGPGGKRGAAKKPPERTSR* |
| Ga0164301_109055151 | 3300012960 | Soil | MTTLTMRMIKGHFVVSGPDVEPMKFKSRPEARDWCKTYHPGSPTTEIGPGGKRAPPKKRERPGREG* |
| Ga0164302_118968202 | 3300012961 | Soil | MTMLTMRVVKGDFIVTGPDIAPMKFKTRPEARDWCKTHHPGSPITEIGPGGKRAP |
| Ga0163162_114914102 | 3300013306 | Switchgrass Rhizosphere | MTTLTMRLVKGDFIVTGPDIEPMKFKSRPEARDWCKMHHPGSPITEIGPGGKRAPRKKPVR* |
| Ga0163162_121666912 | 3300013306 | Switchgrass Rhizosphere | MTTLTMRLIKGHFIVSGPDVEPMKFKSRREARDWCKTHHHGSPITEVGPGGKRAPPKKPVR* |
| Ga0157380_132670581 | 3300014326 | Switchgrass Rhizosphere | MTTLTMRVVKGDFIVTGPDIAPMKFKTRPEARDWCKTHHPGSPITEIGPGGKRAPPKKRERPGREA* |
| Ga0157376_120497811 | 3300014969 | Miscanthus Rhizosphere | MTTLTMRLIKGHFIVSGPDVEPMKFKSRPEARDWCKTHHPGSPIREIGPGTKKRPPK |
| Ga0132258_113379201 | 3300015371 | Arabidopsis Rhizosphere | MTTLTMRLVKGDFIVTGPDVEPMKFKSRREAKDWCKAHHPGSPITEAGPGGKRAAPKKLSERPSR* |
| Ga0132258_120371032 | 3300015371 | Arabidopsis Rhizosphere | MTTLTMRLVRGDFIVTGPDIEPMKFKSRPEARDWCKAHHPGSPITEIGPSGKRAAKKSPDRTNR* |
| Ga0132257_1011799821 | 3300015373 | Arabidopsis Rhizosphere | GDFIVTGPDIEPMKFKSRPEARDWCKAHHPGSPITEIGPSGKRAAKKSPDRTNR* |
| Ga0132257_1023974512 | 3300015373 | Arabidopsis Rhizosphere | MTTLTMRVVKGDFIVTGPDIAPMKFKSRPEARDWCKTHYPGSPVTEIGPGGKR |
| Ga0132255_1019937932 | 3300015374 | Arabidopsis Rhizosphere | MTTLTMRVVKGDFIVTGPDIAPMKFKSRPEARDWCKTHHPGSPIREIGPGTKKRPPPKAKKGR |
| Ga0190266_103757612 | 3300017965 | Soil | MTTLTMRLVKGDFIVTGPDIAPMKFKTRPEARDWCKTHHPGSPITEVGPGGKRAPRKKLV |
| Ga0184611_11430103 | 3300018067 | Groundwater Sediment | MTTLTLRMINGDFVVTGPDIEPMKFKNRREAREWCMTHHPGSPIKEIGRAAPKKLPSDDR |
| Ga0184611_11877841 | 3300018067 | Groundwater Sediment | MTTLTMRLVKSDFIVTGPDIEPMKFKSRREAKDWCKAHHPGSPITEVGPGGKRAAPKKLSERPSR |
| Ga0184624_100926781 | 3300018073 | Groundwater Sediment | MTTLIMPLVKDDFIVTGPDIEPMKFKSRSEARDWCLKHHPGSPITEIGPGGKRAPENR |
| Ga0184624_105449551 | 3300018073 | Groundwater Sediment | MTTLTLRMIKGDFVVTGPDIEPMKFKNRREAREWCMTHHPGSPIKEIGRAAPKKLPSDDR |
| Ga0184624_105468132 | 3300018073 | Groundwater Sediment | MTTLTMRVVKGDFIVTGPDIAPMKFKSRPEARDWCKTHHPGSPVTEIGAGCKRASKKPPERPGR |
| Ga0190270_101778512 | 3300018469 | Soil | MTTLTMRLVKGDFIVTGPDVEPMKFKSRREAKDWCKAHHPGSPITEVGPGGKRAVPKKLSERPSR |
| Ga0190270_132438671 | 3300018469 | Soil | MTTLTMRRVKGDFIVTGPDVEPMKFKSRPEARDWCKTHHPGSPITEVGPSGKRAPRKKPV |
| Ga0190274_102225104 | 3300018476 | Soil | MTTLIMRMIKGDFVVTGPDVEPMKFKTRAEARDWCRAHHPGSPIAEVGPGGRGARGGPRL |
| Ga0193697_11495631 | 3300020005 | Soil | MTTLTMRLVKGDFIVTGPDVEPMKFKGRREAKDWCKAHHPGSPITEVGPGGKRAVPKKLS |
| Ga0210381_100336212 | 3300021078 | Groundwater Sediment | MTTLARRVIMGDFIVTGPDIEPMKFKSRSEARDWCLKHHPGSPITEIGPGGKRAPKKSLERPSR |
| Ga0210381_101401123 | 3300021078 | Groundwater Sediment | MTTLTMRVIKGDFIVTGPDVEPMKFKSRSEARDWCKTHHPGSPITEIGPGGKRAAPKKPPERPSR |
| Ga0222621_10935972 | 3300021510 | Groundwater Sediment | MTTLTMRMIKGDFVVTGPDIEPMKFKSRREARDWCVKQHPGSPIEEIGPGGKRAESRRPKQTGSDAR |
| Ga0222623_102576062 | 3300022694 | Groundwater Sediment | MTALTMRMIKGDFVVTGPDVEPMKFKSRREARDWCMTHHPGSPITEVGPGGKRAAKAKKKSADGR |
| Ga0222622_111138882 | 3300022756 | Groundwater Sediment | MTTLTMRMIKGDFVVTGPDIEPMKFKSRREARDWCAKQHPGSPIEEIGPGGKRAESRRPKQTASDAR |
| Ga0207706_100365317 | 3300025933 | Corn Rhizosphere | MTTLTMRLVKGDFIVTGPDVEPMKFKSRREAKDWCKAHHPGSPITEIGPSGKRAAPKKPSERPSR |
| Ga0207706_107805291 | 3300025933 | Corn Rhizosphere | VRGDFIVTGPDIAPMKFKSRREAKDWCKVYHPASSITEIGPGGQRAAAKKLPPREGR |
| Ga0207683_118990332 | 3300026121 | Miscanthus Rhizosphere | MITLTMRVVKGDFIINGPDIAPMKFKSRPEARDWCKTHHPGSPIREIGPGTKRRPP |
| Ga0268264_119169312 | 3300028381 | Switchgrass Rhizosphere | MTTLTMRMIKGHFIVSGPDIEPMKSKSRPEARDWCKTHHPGSPITEVGPGGKRAARKKRPERPSR |
| Ga0307298_101273452 | 3300028717 | Soil | MRMIKGDFVVTGPDVEPMKFKSRREARDWCMTHHPGSPITEVGPGGKRAAKAKKKSADAR |
| Ga0307301_101042522 | 3300028719 | Soil | MTTLTMRLVKSDFIVTGPDIEPMKFKSRREAKDWCKAHHPGSPITEVGPGGKRAVPKKLSERPSR |
| Ga0307317_101893412 | 3300028720 | Soil | MTTLTMRLVKGDFIVTGPDVEPMKFKGRREAKDWCKAHHPGSPITEVGPGGKRAAPKKLSERPSR |
| Ga0307315_102866631 | 3300028721 | Soil | TAMTALTMRMIKGDFVVTGPDVEPMKFKSRREARDWCMTHHPGSPITEVGPGGKRAAKAKKKSADAR |
| Ga0307319_102953302 | 3300028722 | Soil | MTRARLRNVILVKGHFIVSGPDVEPMKFKSRREARDWCKTHHPGSPITEVGPGGKRAPRKKPVR |
| Ga0307297_101326032 | 3300028754 | Soil | MTTLTMRLVKGDFIVTGPDVEPMKFKGRREAKDWCKAHHPGSPITEVGPGGKRAVPKKLSERPSR |
| Ga0307280_100911103 | 3300028768 | Soil | MTTLTMRVIKGDFIVTGPDVEPMKFKSRSEARDWCKTHHPGSPITEIGPGGKRAAPKKPPDRPSR |
| Ga0307320_102449163 | 3300028771 | Soil | LSGISMTTLTMRLVKSDFIVTGPDIEPMKFKSRREAKDWCKAHHPGSPITEVGPGGKRAVPKKLSERPSR |
| Ga0307288_102208281 | 3300028778 | Soil | LGSLRCAFCRAHRRVSMTTLARRVIMGDFIVTGPDIEPMKFKSRSEARDWCLKHHPGSPITEIGPGGKRAPKKSLERPSR |
| Ga0307299_100680862 | 3300028793 | Soil | LARRVIMGDFIVTGPDIEPMKFKSRSEARDWCLKHHPGSPITEIGPGGKRAPKKSLERPS |
| Ga0307305_100523205 | 3300028807 | Soil | MTTLTMRVIKGDFIVTGPDVEPMKFKSRSEARDWCKRHHPGSPITEIGPGGKRAAPKKPPERPSR |
| Ga0307305_101593572 | 3300028807 | Soil | MTALTMRMIKGDFVVTGPDVEPMKFKSRREARDWCMTHHPGSPITEVGPGGKRAAKAKKKSADAR |
| Ga0307292_104978251 | 3300028811 | Soil | GDFVVTGPDVEPMKFKSRREARDWCMTHHPGSPITEVGPGGKRAAKAKKKSADAR |
| Ga0307296_101962873 | 3300028819 | Soil | MTTLTMRMIKGDFVVTGPDIEPMKFKSRREARDWCAKQHPGSPIEEIGPGGKRAESRRPKQTGSDAR |
| Ga0307296_107640401 | 3300028819 | Soil | MTTLTLRLIKGDFDVTGPDVEPVKFNDWCAQQHPGSPIEEIGPGGKRAAKQRPQTERGRA |
| Ga0307296_108093041 | 3300028819 | Soil | MTTLTMRLVKSDFIVTGPDIEPMKFKSRREAKDWCKAHHPGSPITEVGPGGKRAAPKKLS |
| Ga0307310_101310801 | 3300028824 | Soil | MTALTMRMIKGDFVVTGPDVEPMKFKSRREARDWCMTHHPGSPITEVGPGGKRAAKAKKKSA |
| Ga0307310_104849522 | 3300028824 | Soil | VVTGPDVQPMKFKSRREARDWCMTHHPGSPITEVGPGGKRAAKAKKKSADAR |
| Ga0307312_105464542 | 3300028828 | Soil | MTALTMRMIKGDFVVTGPDVQPMKFKSRREARDWCMTHHPGSPITEVGPGGKRAAKAKKKSADAR |
| Ga0307286_100728441 | 3300028876 | Soil | MTTLTMRMIKGNFVVTGPDCRAIKCKPRREARHWCAKHHPGSPIEEIGRGGKRAERQRSP |
| Ga0307286_103535571 | 3300028876 | Soil | MRLVKGHFVVTGSDVEPMKFKTRPEARDWCRTHHPGSPITEIGPGGKSAAKKPPPKSKGDAR |
| Ga0307286_104021821 | 3300028876 | Soil | QGAMTTLTMRMIKGHFVVSGPDVEPMKFKTRPEAREWCMAHHPGSPIEEIGPGGKRAAKKPLPKSERQ |
| Ga0307278_101055581 | 3300028878 | Soil | MTTLTMRLVKGHFIVSGPDVEPMNFKSRHEAEDHPGSPITEIGPGGKRAARKTSPERPSR |
| Ga0307277_103383252 | 3300028881 | Soil | MTTLTMRMIKGDFVFTGPDVEPMKFKSRREARDWCAKQHPGSPIEEIGRGGKRAESRRPKQTGDAR |
| Ga0307304_101317912 | 3300028885 | Soil | MTTLTMRMIKGDFVVTGPDIEPMKFKSRREARDWCAKQHPGSPIEEIGPGGKRAESRRPNQTGSDAR |
| Ga0307304_101402152 | 3300028885 | Soil | MTTLTMRLVKSDFIVTGPDIEPMKFKSRREAKDWCKAHHPGSPITEVGPGGKRAA |
| Ga0308206_11915692 | 3300030903 | Soil | LFCVSPLSGDFIVTGPDVEPMKFKSRREAKDWCTVYHPASSITEIGPGGKGGAAKKPPERPSR |
| Ga0308201_102812432 | 3300031091 | Soil | VGLFCVSPLSGDFIVTGPDVEPMKFKSRREAKDWCTVYHPASSITEIGPGGKGGAAKKPPERPSR |
| Ga0307500_103127231 | 3300031198 | Soil | MTTLTMRLVKGDFIVTGPDVEPMKFKSRREAKDLCKAHHPGSPITEIGPSGKRAAPKKPSERPSR |
| Ga0307497_105470652 | 3300031226 | Soil | MTTLTMRMIKGHFVVTGPDVEPTKFNSRREAKDWCAQHHPGSPIEEIGPKRAAKLRPKQKGEDAR |
| Ga0310892_106190021 | 3300031858 | Soil | MTTFTMRFMRGHFVVTGPDIEPMKFKSRPEARDWCKVHYPGSPITEIGPPGGKRAPPKRGVENKPR |
| Ga0307472_1021714381 | 3300032205 | Hardwood Forest Soil | MTTLTMRLVKGHFIVTGPDVEPMKFKTRREARDWCKTHHPGSPITEVGPGGKRAPRKKPV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |