NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105125

Metagenome / Metatranscriptome Family F105125

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105125
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 83 residues
Representative Sequence VLEDGSEFKYYGPGVGHIATEPNYSGGEQEKEALVNVVKLTPKGLAELSAEALKLDKHARKEAKKIFGNSDPAKRS
Number of Associated Samples 88
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.00 %
% of genes from short scaffolds (< 2000 bps) 87.00 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (65.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(38.000 % of family members)
Environment Ontology (ENVO) Unclassified
(34.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(36.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.00%    β-sheet: 16.35%    Coil/Unstructured: 58.65%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00356LacI 7.00
PF00072Response_reg 6.00
PF00532Peripla_BP_1 6.00
PF02518HATPase_c 2.00
PF03807F420_oxidored 2.00
PF02467Whib 2.00
PF00933Glyco_hydro_3 2.00
PF13450NAD_binding_8 2.00
PF00248Aldo_ket_red 2.00
PF13701DDE_Tnp_1_4 2.00
PF00486Trans_reg_C 2.00
PF07944Glyco_hydro_127 2.00
PF00440TetR_N 2.00
PF01144CoA_trans 2.00
PF12831FAD_oxidored 1.00
PF00501AMP-binding 1.00
PF00196GerE 1.00
PF00211Guanylate_cyc 1.00
PF13377Peripla_BP_3 1.00
PF01590GAF 1.00
PF01594AI-2E_transport 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1472Periplasmic beta-glucosidase and related glycosidasesCarbohydrate transport and metabolism [G] 2.00
COG1788Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunitLipid transport and metabolism [I] 2.00
COG2057Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunitLipid transport and metabolism [I] 2.00
COG3533Beta-L-arabinofuranosidase, GH127 familyCarbohydrate transport and metabolism [G] 2.00
COG4670Acyl CoA:acetate/3-ketoacid CoA transferaseLipid transport and metabolism [I] 2.00
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 1.00
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.00 %
UnclassifiedrootN/A35.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_105295935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1131Open in IMG/M
3300004081|Ga0063454_101830518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia532Open in IMG/M
3300004157|Ga0062590_101034015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia785Open in IMG/M
3300004463|Ga0063356_106459953Not Available502Open in IMG/M
3300005337|Ga0070682_101351513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia607Open in IMG/M
3300005347|Ga0070668_100710680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia887Open in IMG/M
3300005366|Ga0070659_100455869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1085Open in IMG/M
3300005563|Ga0068855_101767143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium629Open in IMG/M
3300005563|Ga0068855_102581296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter globiformis504Open in IMG/M
3300005843|Ga0068860_100839824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia933Open in IMG/M
3300006577|Ga0074050_11212520All Organisms → cellular organisms → Bacteria1122Open in IMG/M
3300009098|Ga0105245_11098609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium841Open in IMG/M
3300009147|Ga0114129_10084724All Organisms → cellular organisms → Bacteria → Terrabacteria group4400Open in IMG/M
3300009176|Ga0105242_11755338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia658Open in IMG/M
3300009821|Ga0105064_1039783Not Available893Open in IMG/M
3300009822|Ga0105066_1013580Not Available1543Open in IMG/M
3300009822|Ga0105066_1151155Not Available533Open in IMG/M
3300009836|Ga0105068_1006321All Organisms → cellular organisms → Bacteria1865Open in IMG/M
3300009840|Ga0126313_10775758Not Available779Open in IMG/M
3300010036|Ga0126305_10032956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2837Open in IMG/M
3300010036|Ga0126305_10129890Not Available1548Open in IMG/M
3300010040|Ga0126308_10858826Not Available631Open in IMG/M
3300010042|Ga0126314_10035749All Organisms → cellular organisms → Bacteria3147Open in IMG/M
3300010044|Ga0126310_11055773All Organisms → cellular organisms → Bacteria → Terrabacteria group643Open in IMG/M
3300012360|Ga0137375_10161072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2177Open in IMG/M
3300012360|Ga0137375_11264469Not Available560Open in IMG/M
3300012373|Ga0134042_1177179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria527Open in IMG/M
3300012507|Ga0157342_1007054Not Available1082Open in IMG/M
3300012513|Ga0157326_1066038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia563Open in IMG/M
3300012909|Ga0157290_10253784Not Available626Open in IMG/M
3300012914|Ga0157297_10252954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300012941|Ga0162652_100001249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora eburnea2115Open in IMG/M
3300012941|Ga0162652_100068535Not Available602Open in IMG/M
3300012984|Ga0164309_10300236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Propionibacterium → unclassified Propionibacterium → Propionibacterium sp.1157Open in IMG/M
3300012989|Ga0164305_12025226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria526Open in IMG/M
3300013096|Ga0157307_1109014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae599Open in IMG/M
3300013297|Ga0157378_12246421All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300015077|Ga0173483_10680510All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300015201|Ga0173478_10058566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Propionibacterium → unclassified Propionibacterium → Propionibacterium sp.1290Open in IMG/M
3300018051|Ga0184620_10172065All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300018066|Ga0184617_1219382Not Available568Open in IMG/M
3300018075|Ga0184632_10042169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1962Open in IMG/M
3300018075|Ga0184632_10214667Not Available846Open in IMG/M
3300018075|Ga0184632_10326560Not Available661Open in IMG/M
3300018076|Ga0184609_10117972Not Available1204Open in IMG/M
3300018469|Ga0190270_11466452Not Available730Open in IMG/M
3300019356|Ga0173481_10443720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria647Open in IMG/M
3300019767|Ga0190267_11197987Not Available556Open in IMG/M
3300019867|Ga0193704_1044696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia876Open in IMG/M
3300020012|Ga0193732_1065312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia607Open in IMG/M
3300020016|Ga0193696_1050199All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300020081|Ga0206354_11664116Not Available514Open in IMG/M
3300021078|Ga0210381_10049984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1250Open in IMG/M
3300022534|Ga0224452_1085171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia960Open in IMG/M
3300022694|Ga0222623_10003314All Organisms → cellular organisms → Bacteria5585Open in IMG/M
3300025925|Ga0207650_10882136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1759Open in IMG/M
3300026041|Ga0207639_10717276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium928Open in IMG/M
3300026089|Ga0207648_10453296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1168Open in IMG/M
3300026118|Ga0207675_100043514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4193Open in IMG/M
3300027209|Ga0209875_1009905All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RBG_16_73_201120Open in IMG/M
3300027379|Ga0209842_1025732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis1122Open in IMG/M
3300027511|Ga0209843_1089914Not Available520Open in IMG/M
3300027952|Ga0209889_1026311Not Available1291Open in IMG/M
3300027961|Ga0209853_1025131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1779Open in IMG/M
3300027961|Ga0209853_1025498All Organisms → cellular organisms → Bacteria1764Open in IMG/M
3300028711|Ga0307293_10120144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia → Knoellia sinensis → Knoellia sinensis KCTC 19936835Open in IMG/M
3300028713|Ga0307303_10059667All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300028719|Ga0307301_10064308All Organisms → cellular organisms → Bacteria → Terrabacteria group1139Open in IMG/M
3300028720|Ga0307317_10133555Not Available830Open in IMG/M
3300028755|Ga0307316_10020032All Organisms → cellular organisms → Bacteria2129Open in IMG/M
3300028778|Ga0307288_10054765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1380Open in IMG/M
3300028782|Ga0307306_10018423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora eburnea1568Open in IMG/M
3300028782|Ga0307306_10032075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Propionibacterium → unclassified Propionibacterium → Propionibacterium sp.1250Open in IMG/M
3300028793|Ga0307299_10027903All Organisms → cellular organisms → Bacteria → Terrabacteria group2044Open in IMG/M
3300028799|Ga0307284_10455526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia523Open in IMG/M
3300028824|Ga0307310_10208897Not Available924Open in IMG/M
3300028828|Ga0307312_10049912All Organisms → cellular organisms → Bacteria2496Open in IMG/M
3300028875|Ga0307289_10033122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2040Open in IMG/M
3300028875|Ga0307289_10075768All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300028880|Ga0307300_10062266Not Available1074Open in IMG/M
3300028880|Ga0307300_10187589Not Available665Open in IMG/M
3300028881|Ga0307277_10330173Not Available678Open in IMG/M
3300030993|Ga0308190_1175273All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300031058|Ga0308189_10299502Not Available628Open in IMG/M
3300031098|Ga0308191_1040088Not Available520Open in IMG/M
3300031114|Ga0308187_10219814Not Available675Open in IMG/M
3300031421|Ga0308194_10021929All Organisms → cellular organisms → Bacteria1410Open in IMG/M
3300031731|Ga0307405_10193173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1472Open in IMG/M
3300031731|Ga0307405_10891829Not Available751Open in IMG/M
3300031943|Ga0310885_10906779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium505Open in IMG/M
3300032005|Ga0307411_10859943Not Available803Open in IMG/M
3300032080|Ga0326721_10774413All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300032205|Ga0307472_101910804All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300034004|Ga0334926_086336Not Available520Open in IMG/M
3300034008|Ga0334942_100727Not Available691Open in IMG/M
3300034131|Ga0334911_070421All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300034151|Ga0364935_0017040All Organisms → cellular organisms → Bacteria1923Open in IMG/M
3300034644|Ga0370548_105270Not Available576Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil38.00%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand10.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil6.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.00%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.00%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil1.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.00%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust1.00%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust1.00%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.00%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300009822Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40EnvironmentalOpen in IMG/M
3300009836Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300012513Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510Host-AssociatedOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027209Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027379Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027511Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031098Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034004Biocrust microbial communities from Mojave Desert, California, United States - 22HNCEnvironmentalOpen in IMG/M
3300034008Biocrust microbial communities from Mojave Desert, California, United States - 38SMCEnvironmentalOpen in IMG/M
3300034131Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMSEnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10529593513300000956SoilDCFKSLVILEDGSEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLSRKGLAEMSAEALKLDKHARKESKVFANSDPAARS*
Ga0063454_10183051823300004081SoilLVILEDGSELKFYGRGVGDIGTEPNYSGGEQEKEALVNVIQLSKKGLAEASKEALRLDRHARTAAKSVFGKSEPAKRA*
Ga0062590_10103401513300004157SoilVILEDGTEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLTPKGLAEFSAEALKLDKHARKEAKSVFGNSDPAKRA*
Ga0063356_10645995313300004463Arabidopsis Thaliana RhizosphereIRAEVTKLDDRTCVPFKCFKALQVLEDGHEYKYFGSGVGHIATEPNYSGGEQEKEELINVVKLSPKGLAEMSGEALRLDKHARKESKIFAKSDPAKRS*
Ga0070682_10135151323300005337Corn RhizosphereDKVGERKCVPFRCFAKSLVILEDGSEFKYYASGVGDIGTEPNYSGGEQEKEALINVIQLSKKGLAEASKEALRIDRHARTAAKNVFGKSHPAQRA*
Ga0070668_10071068023300005347Switchgrass RhizosphereFSNTLTILEDGTEFKYYAQGVGGIATEPNYSGGEQEKEALLNLVQLTPKGLAEASAEALQLDRHARTTASGVFNSSAPAKRAP*
Ga0070659_10045586923300005366Corn RhizosphereQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSKEALRLDKHARKESKIFAKSDAAKRS*
Ga0068855_10176714313300005563Corn RhizosphereGERKCVDYDCFKSLVILEDGSEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLSSKGLAEYSAEALKLDKHARKESKVFANSEPAKRS*
Ga0068855_10258129613300005563Corn RhizosphereIRAEVTKVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSKEALRLDKHARKESKIFAKSDAAKRS*
Ga0068860_10083982413300005843Switchgrass RhizosphereRAEVAKVGERKCVDYDCFKSLVILEDGSEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLSSKGLAEYSAEALKLDKHARKESKVFANSEPAKRS*
Ga0074050_1121252033300006577SoilLEDGTEFKYFGPGVGHIATEPNYSGGEQEKEVLINVVKLKPKGLAEASAEALKLDKHARKESNIFAKSDPAQRP*
Ga0075421_10227811013300006845Populus RhizosphereQGVGGIATEPNYSGGEQEKEALLNLIQLTPKGLAEASAEALKLDRHARTTAGEVFGSSAPAKRSP*
Ga0105245_1109860913300009098Miscanthus RhizosphereKVGERKCVDYDCFKSLVILEDGSEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLSSKGLAEYSAEALKLDKHARKESKVFANSEPAKRS*
Ga0114129_1008472463300009147Populus RhizosphereGTEFKYYAQGVGGIATEPNYSGGEQEKEALLNLIQLTPKGLTEASAEALKLDRHARTTAGEVFGSSAPARRSR*
Ga0105242_1175533823300009176Miscanthus RhizosphereCFKSLVILEDGTEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLSSKGLREFSAEALKLDKHARKESKVFANSEPAKRG*
Ga0105064_103978313300009821Groundwater SandYYAEGVGGIATEPNYSGGEQEKEALLNIIQLTPKGLAEASAEALRLDKHARSTASEVFGSSAAAKRSP*
Ga0105066_101358013300009822Groundwater SandILETGNEFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEMSVLAVKLDQHARTVAPQIFGNSAGAKRAR*
Ga0105066_115115513300009822Groundwater SandDALAILETGNEFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEISAQALKLDQHARTIAPQVFGSSAKAKRAR*
Ga0105068_100632113300009836Groundwater SandAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEMSVLAVKLDQHARTVAPQIFGNSAGAKRAR*
Ga0126313_1077575823300009840Serpentine SoilCFKALAILEDGSEFKYYGPGVGHIATKPNDSGGEKEIEELVNVVKLKPQGLAEMSAEALKLDKRASKEAESVFGNSEPAQRP*
Ga0126305_1003295613300010036Serpentine SoilAILEDGSEFKYYGPGVGHIATKPNDSGGEQEIEELVNVVKLKPQGLAEMSAEALKLDKRASKEAESVFGNSEPAQRP*
Ga0126305_1012989013300010036Serpentine SoilKSLVILEDDSEFKYYGPGVGHIATEPNYSGGEQEKEALVNVVKLTSKGLAEMSAEALKLDKHARKEAKTIFGNSDPAKRRA*
Ga0126308_1085882613300010040Serpentine SoilSEFKYYGPGVGHIATEPNYSGGEQEKEELVNVVKLKPQGLAEMSAEALKLDKRASKEAKSVFGSSEPAQRP*
Ga0126314_1003574943300010042Serpentine SoilAKVDERKCVPFDCFKSLAILEDGSEFKYYGPGVGHIATEPNNSGGEQEKEELVNVVKLKPQGLAEMSAEALKLDKRASKEAKSVFGSSEPAQRP*
Ga0126310_1105577323300010044Serpentine SoilCFKSLVILEDDSEFKYYGPGVGHIATEPNYSGGEQEKEALVNVVKLSPKGLAEMSSEALKLDKHARQEAKKVFGNSEPAGRS*
Ga0137375_1016107213300012360Vadose Zone SoilEFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEISVLAVKLDQHARTVAPQIFGNSAAAKRAR*
Ga0137375_1126446923300012360Vadose Zone SoilEFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLADFSVQALKLDQHARTVAPQIFGNSAAAKRAR*
Ga0134042_117717913300012373Grasslands SoilFRCFSDSLAVLEAGTEFKYYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEISAQALKLDQHARAVAPQVFGGSAGAKRVG*
Ga0157342_100705413300012507Arabidopsis RhizosphereILEPNDRELKYFGRGVGHIATEPNYSGGEQEKEALVNVVRLKPKGLAEMSAEALKMDKHARKESSVFAKSDPAKRA*
Ga0157326_106603813300012513Arabidopsis RhizospherePFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEALINVVKLTPKGLAEMSAEALRLDKHARKESKIFAKSEAAKRS*
Ga0157290_1025378413300012909SoilCFSKTLTILEAGTEFKYYAAGVGGIATEPNYSGGEQEKEALINVVQLTPKGLAEFSTQALKLDQHARTTASPVFERSSPAKRSR*
Ga0157297_1025295423300012914SoilDDRTCVPFKCFKALQVLEDGHEYKYFGSGVGHIATEPNYSGGEQEKEELINVVKLSPKGLAEMSGEALRLDKHARKESKIFAKSDPAKRS*
Ga0162652_10000124913300012941SoilKCVDYDCFKSLVILEDGTEFKYFGPGVGHIATVPNYSGGEQEKEELVNVVKLTRKGLAEFSAEALKLDKHARKESKVFANSDAAKRA*
Ga0162652_10006853513300012941SoilCVPFKCFSNTLTILEDGTEFKYYAHGVGGIATEPNYSGGEQEKEALLNVIQLTPKGLTEASAEALKLDRHARTTASGVFGNSAPARRSR*
Ga0164309_1030023613300012984SoilKALQVLEDGTEYKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSAEALRLDKHARKESKIFAKSDAAKRS*
Ga0164305_1202522613300012989SoilKALSVLEDGTEFKYYGPGVGDIATEPNYSGGEQEKEALINVVQLTPKGLAEASREALRLDRHARTAAKRIFGSSEAAKRAG*
Ga0157307_110901423300013096SoilKVGEKKCVDYDCFKSLVILEDGTEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLTRKGLAEFSAEALKLDKHARKESKVFANSDAAKRA*
Ga0157378_1224642123300013297Miscanthus RhizosphereFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSKEALRLDKHARKESKIFAKSDAAKRS*
Ga0173483_1068051013300015077SoilDCFKSLVILEDDTEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLSPKGLAEMSDEALRLDKHARKESKIFAKSDPAKRS*
Ga0173478_1005856613300015201SoilVLEDGTEYKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSAEALRLDKHARKESKIFAKSDAAKRS*
Ga0184620_1017206523300018051Groundwater SedimentVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTRKGLAEMSAEALRLDKHARKESKIFAKSEAAKRS
Ga0184617_121938213300018066Groundwater SedimentEDGTEFKYYGSGVGHIATEPNYSGGEQEKEALVNVIHLTAKGLTEASKEALRLDRHARTAARKIFGKSKLAKRV
Ga0184632_1004216943300018075Groundwater SedimentFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEMSVLAVKLDQHARTVAPQIFGNSAVAKRAR
Ga0184632_1021466723300018075Groundwater SedimentFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEISVQAMKLDQHARTVAPQIFGNSATAKRAR
Ga0184632_1032656013300018075Groundwater SedimentYYAEGVGGIATEPNYSGGEQEKEALLNVIELTPKGLAEASAEALKLDRHARSTASEVFGNSAPAKRSR
Ga0184609_1011797213300018076Groundwater SedimentYYAEGVGGIATEPNYSGGEQEKEALLNIIQLTPKGLAEASAEALRLDKHARSTASEVFGSSAAAKRSS
Ga0190270_1146645223300018469SoilFDCFKSLAILEDGSEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLKPKGLAEMSAEAMKLDKRASKEAKSVFGNSEPAQRP
Ga0190273_1102881713300018920SoilASGVGHIATEPNYSGGEQEKEALVNVIQLSKKGLAEASKEALQLDRHARTAAKNVFGKSKPAKRA
Ga0173481_1044372023300019356SoilCVPFKCFKALQVLEDGHEYKYFGSGVGHIATEPNYSGGEQEKEELINVVKLSPKGLAEMSGEALRLDKHARKESKIFAKSDPAKRS
Ga0190267_1119798723300019767SoilVLEDGSEFKYYGPGVGHIATEPNYSGGEQEKEALVNVVKLTPKGLAELSAEALKLDKHARKEAKKIFGNSDPAKRS
Ga0193704_104469613300019867SoilTKVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTRKGLAEMSAEALRLDKHARKESKIFAKSEAAKRS
Ga0193732_106531223300020012SoilTKVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSAEALRLDKHARKESKIFAKSEAAKRS
Ga0193696_105019933300020016SoilIRAEVAKVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLVNVVKLTPKGLAEMSKEALRLDKHARKESKIFAKSDPAKRP
Ga0206354_1166411623300020081Corn, Switchgrass And Miscanthus RhizosphereGKRKCVRFQCFPQALSVLEDGTELKYYGPGGGDIATEPEYSGGEQEKEELINVIQLTPDGLREASKEALRLDRHARTAAEHVFARSAPAERAR
Ga0210381_1004998413300021078Groundwater SedimentKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTRKGLAEMSAEALRLDKHARKESKIFAKSEAAKRS
Ga0224452_108517113300022534Groundwater SedimentTIRAEVTKVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTRKGLAEMSAEALRLDKHARKESKIFAKSEAAKRS
Ga0222623_1000331463300022694Groundwater SedimentGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEMSVLAVKLDQHARTVAPQIFGNSAVAKRAR
Ga0207650_1088213613300025925Switchgrass RhizosphereVLEDGTELKYYGPGVGDIATEPEYSGGEQEKEELINVIQLTPDGLREASKEALRLDRHARTAAEHVFARSAPAERAR
Ga0207639_1071727623300026041Corn RhizosphereEDGSEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLSSKGLAEYSAEALKLDKHARKESKVFANSEPAKRS
Ga0207648_1045329623300026089Miscanthus RhizosphereALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSKEALRLDKHARKESKIFAKSDAAKRS
Ga0207675_10004351413300026118Switchgrass RhizosphereKSLVILEDGSEFKHFGPGVGHIATEPNYSGGEQEKEELVNVVKLSSKGLAEYSAEALKLDKHARKESKVFGNSEPAKRS
Ga0209875_100990523300027209Groundwater SandLAILEAGTEFKYYAEGVGGIATEPNYSGGEQEKEALLNVIQLTPKGLAEASAEALRLDKHARSTASEVFGSSAAAKRSP
Ga0209842_102573223300027379Groundwater SandLTAEVAKLGERKCVPFRCFSNTLAILEAGTEFKYYAEGVGGIATEPNYSGGEQEKEALLNVIQLTPKGLAEASAEALRLDKHARSTASEVFGSSAAAKRSP
Ga0209843_108991413300027511Groundwater SandAILEAGTEFKYYAEGVGGIATEPNYSGGEQEKEALLNIIQLTPKGLAEASAEALRLDKHARSTASEVFGSSAAAKRSP
Ga0209889_102631123300027952Groundwater SandDALAILETGNEFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLADFSVQALKLDQHARTVAPQVFGNSATAKRAR
Ga0209853_102513133300027961Groundwater SandLETGNEFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEMSVLAVKLDQHARTVAPQIFGNSAGAKRAR
Ga0209853_102549813300027961Groundwater SandLETGNEFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEISAQALKLDQHARTIAPQVFGSSAKAKRAR
Ga0307293_1012014413300028711SoilRAEVSKVGEKKCVDYDCFKSLVILEDGSEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLTRKGLAEFSADALKLDKHARKESKVFANSDAAKRS
Ga0307303_1005966723300028713SoilAEVAKVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLVNVVKLTPKGLAEMSKEALRLDKHARKESKIFAKSDPAKRP
Ga0307301_1006430823300028719SoilKCFSNTLTIMEDGTEFKYYAHGVGGIATEPNYSGGEQEKEALLNVIQLTPKGLTEASAEALKLDRHARTTASGVFGNSAPARRSR
Ga0307317_1013355533300028720SoilNTLAVLEDGTEFKYYAQGVGGIATEPNYSGGEQEKEALLNVIQLTPTGLTEASAGALKLDRHARTTASEVFGSSAPARRSR
Ga0307316_1002003213300028755SoilDGTEFKYYAQGVGGIATEPNYSGGEQEKEALLNVIQLTPTGLTEASAGALKLDRHARTTASEVFGSSAPARRSR
Ga0307288_1005476513300028778SoilRAEVAKVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLVNVVKLTPKGLAEMSKEALRLDKHARKESKIFAKSDPAKRP
Ga0307306_1001842313300028782SoilSEVAKVGEKKCVDYDCFKSLVILEDGTEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLTRKGLAEFSAEALKLDKHARKESKVFANSDAAKRA
Ga0307306_1003207513300028782SoilQVLEDGHEYKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSAEALRLDKHARKESKIFAKSEAAKRS
Ga0307299_1002790333300028793SoilEFKYYAQGVGGIATEPNYSGGEQEKEALLNVIQLTPTGLTEASAGALKLDRHARTTASEVFGSSAPARRSR
Ga0307284_1045552613300028799SoilDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSAEALRLDKHARKESKIFAKSEAAKRS
Ga0307310_1020889723300028824SoilKSLVILEDGTEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLTRKGLAEFSAEALKLDKHARKESKVFANSDAAKRA
Ga0307312_1004991213300028828SoilLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLTNVVKLTPKGLAEMSAEALRLDKHARKESKIFAKSEAAKRS
Ga0307289_1003312233300028875SoilLTILEDGTEFKYYAQGVGGIATEPNYSGGEQEKEALLNVIQLTPKGLTEASAEALKLDRHARTTASGVFGNSAPARRSR
Ga0307289_1007576813300028875SoilVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLVNVVKLTPKGLAEMSKEALRLDKHARKESKIFAKSDPAKRP
Ga0307300_1006226623300028880SoilAKVGEKKCVDYDCFKSLVILEDGTEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLTRKGLAEFSAEALKLDKHARKESKVFANSDAAKRA
Ga0307300_1018758923300028880SoilLVVLEDGTEFKYFGRGVGHIATEPNYSGGEQEKEELVNVVRLKPKGLAEMSAEALKLDKHARKESSVFAKSDPAKRA
Ga0307277_1033017323300028881SoilETGNEFKFYAPGVGHIATEPNYSGGEQEKEALINVIQLTPKGLAEMSVLAVKLDQHARTVAPQIFGNSAVAKRAR
Ga0308190_117527313300030993SoilKVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLVNVVKLTPKGLAEMSKEVLRLDKHARKESTIFAKSDPAKRP
Ga0308189_1029950213300031058SoilTIRAEVTKVGVRKCVPFQCFPKALTVLEDGTEFKYYGSGIGHIATEPNYSGGEQEKEALVNVIHLTPKGLAEASKEALHLDRHARTAAKKIFGNSKRAKRA
Ga0308191_104008823300031098SoilSKVGEKKCVDYDCFKSLVILEDGSEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLTRKGLAEFSAEALRLDKHARKESKVFANSDAAKRS
Ga0308187_1021981423300031114SoilRAEVAKVDDRKCVPFKCFKALQVLEDGHEFKYFGPGVGHIATEPNYSGGEQEKEVLVNVVKLTPKGLAEMSKEVLRLDKHARKESTIFAKSDPAKRP
Ga0308194_1002192913300031421SoilVGVRKCVPFQCFPKALTVLEDGTEFKYYGSGIGHIATEPNYSGGEQEKEALVNVIHLTPKGLAEASKEALHLDRHARTAAKKIFGNSKRAKRA
Ga0307405_1019317313300031731RhizosphereVDERKCVPFDCFKSLAILEDGSEFKYYGPGVGHIATEPNNSGGEQEKEELVNVVNLKPQGLAEMSAEALKLDKRASKEAKSVFGSSEPAQRP
Ga0307405_1089182923300031731RhizosphereLEDGSEFKYYGPGVGHIATEPNYSGGEQEKEELVNVVKLKPQGLAEMSAEALKLDKRASKEAKSVFGSSEPAQRP
Ga0310885_1090677913300031943SoilILEDGTEFKYFGPGVGHIATEPNYSGGEQEKEELVNVVKLSSKGLAEYSAEALKLDKHARKESKVFGNSEPAKRS
Ga0307411_1085994313300032005RhizosphereSVTATKSGRPMLWRFDCFKALAILEDGSEFKYYGPGVGHIATEPNYSGGEQEKEELVNVVNLKPQGLAEMSAEALKLDKRASKEAKSVFGSSEPAQRP
Ga0326721_1077441313300032080SoilCVPFQCFPQALSVLEDGTELKYYGPGVGDIATEPEYSGGEQEKEELINVIQLTPDGLTEASKEALRLDRHARTAAEHIFARSARAERAR
Ga0307472_10191080423300032205Hardwood Forest SoilKLGVRKCVPFRCFADVLAILEAGTELKYYATGVGPIATEPNYSGGEQEKEALVNLVQLTPQGLAEASQEALRLDEHARGTAKAVFAGSAPARRTR
Ga0334926_086336_250_5133300034004Hypolithic BiocrustVPFRCFSKTLTVLEDGSELKYYASGVGHIATEPNYEGGEQEKEALINVIQLTRKGLDEASKEALRLDRHAAKDAKRIFGKSKPAKRV
Ga0334942_100727_449_6913300034008BiocrustKTLAVLEDGSEFKYYASGVGHIATEPNYEGGEQEKEELINVIQLTPKGLAEASKEALRLDRRAAKEAERIFGKSKPAKRV
Ga0334911_070421_304_5163300034131Sub-Biocrust SoilFKYYAQGVGGIATEPNYSGGEQEKEALLNVIQLTPKGLTEASAEALKLDRHARTTASEVFGSSAPARRSR
Ga0364935_0017040_1660_19203300034151SedimentVPFKCFKSLAILEDGSEFKYYGPGVGHIATEPNYSGGEQEKEELINVVKLSPKGLAEMSAEAIKLDKHARQEAKRVFGSSEPAERP
Ga0370548_105270_2_2923300034644SoilVAKVGARKCVPFQCFPKALEVLEDGSEFKFYGLGVGHIATEPNYSGGEQEKEALVNVIRLTPKGLAEASKEALRLDRHARTAAKKIFGRSKPAKRA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.