Metagenome / Metatranscriptome Family F105117

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Basic Information
Family ID	F105117
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	45 residues
Representative Sequence	MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVD
Number of Associated Samples	93
Number of Associated Scaffolds	100

Basic Information

Family ID

F105117

Family Type

Metagenome / Metatranscriptome

Number of Sequences

100

Average Sequence Length

45 residues

Representative Sequence

MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVD

Number of Associated Samples

Number of Associated Scaffolds

100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.00 %
% of genes near scaffold ends (potentially truncated)	99.00 %
% of genes from short scaffolds (< 2000 bps)	88.00 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Quality Assessment

Transcriptomic Evidence

Yes

Most common taxonomic group

Bacteria

% of genes with valid RBS motifs

99.00 %

% of genes near scaffold ends (potentially truncated)

99.00 %

% of genes from short scaffolds (< 2000 bps)

88.00 %

Associated GOLD sequencing projects

AlphaFold2 3D model prediction

Yes

3D model pTM-score

0.62

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Hidden Markov Model

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Most Common Taxonomy
Group	Bacteria (60.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Taxonomy

Group

Bacteria (60.000 % of family members)

NCBI Taxonomy ID

Taxonomy

All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (29.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.000 % of family members)

Most Common Ecosystem

GOLD Ecosystem

Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(25.000 % of family members)

Environment Ontology (ENVO)

Unclassified
(29.000 % of family members)

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Soil (non-saline)
(36.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1AF_2010_repII_A01DRAFT_10030844 2AF_2010_repII_A1DRAFT_100886161 3JGI1027J12803_1007821952 4JGI10216J12902_1000453831 5JGI12053J15887_101161091 6JGI24033J26618_10457341 7JGI24751J29686_100932942 8JGI25405J52794_100189051 9JGI25405J52794_100351832 10JGI25405J52794_100491951 11Ga0063454_1009002581 12Ga0066820_10020952 13Ga0070676_107147572 14Ga0070667_1000112671 15Ga0070665_1004619701 16Ga0066903_1089777702 17Ga0081539_100763772 18Ga0074054_120834302 19Ga0066660_102584971 20Ga0075425_1006670122 21Ga0105244_104189621 22Ga0114129_114632521 23Ga0105243_127305041 24Ga0105248_120544081 25Ga0105237_103430841 26Ga0126313_117216862 27Ga0126380_106683972 28Ga0126384_114277941 29Ga0126382_107787001 30Ga0126379_137798492 31Ga0124844_12829111 32Ga0137384_108542502 33Ga0137384_110697211 34Ga0137361_114264851 35Ga0157298_100550551 36Ga0162650_1000653562 37Ga0164309_105937681 38Ga0164308_107420881 39Ga0157376_101102901 40Ga0132258_133611822 41Ga0132256_1003177331 42Ga0182033_104670651 43Ga0182038_112380911 44Ga0190266_105695992 45Ga0184638_11511591 46Ga0066669_114925282 47Ga0173482_102144821 48Ga0137408_11666712 49Ga0193705_10716662 50Ga0193730_10016737 51Ga0210382_101439572 52Ga0247788_11105441 53Ga0207694_106170601 54Ga0257163_10413692 55Ga0209325_10115782 56Ga0207780_10466911 57Ga0208984_10044281 58Ga0209076_10690222 59Ga0209466_10009658 60Ga0209466_10019941 61Ga0209488_105549542 62Ga0209526_104888491 63Ga0268264_123884422 64Ga0307299_100539972 65Ga0307284_103037002 66Ga0307495_102175501 67Ga0307497_101865141 68Ga0307505_102112232 69Ga0318516_104354612 70Ga0318528_101104462 71Ga0318542_102305551 72Ga0318561_100059731 73Ga0318572_103024511 74Ga0318572_107637221 75Ga0306917_101650833 76Ga0306917_111187761 77Ga0318493_105095742 78Ga0318500_100197401 79Ga0307468_1021967321 80Ga0318546_100713094 81Ga0318498_104922142 82Ga0318566_104143831 83Ga0318508_11029901 84Ga0318547_107644801 85Ga0318529_100902523 86Ga0318499_104248071 87Ga0318512_100241311 88Ga0318495_100570481 89Ga0318536_101625592 90Ga0306923_109912382 91Ga0310912_111250131 92Ga0310913_101574473 93Ga0310913_104410352 94Ga0310909_103465591 95Ga0318558_106076672 96Ga0315540_100302191 97Ga0318553_105490452 98Ga0315281_120939021 99Ga0307470_103870091 100Ga0373958_0039514_2_124
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Full Alignment

Alignment of all the sequences in the family.

IDLabel

.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.

1AF_2010_repII_A01DRAFT_10030844

2AF_2010_repII_A1DRAFT_100886161

3JGI1027J12803_1007821952

4JGI10216J12902_1000453831

5JGI12053J15887_101161091

6JGI24033J26618_10457341

7JGI24751J29686_100932942

8JGI25405J52794_100189051

9JGI25405J52794_100351832

10JGI25405J52794_100491951

11Ga0063454_1009002581

12Ga0066820_10020952

13Ga0070676_107147572

14Ga0070667_1000112671

15Ga0070665_1004619701

16Ga0066903_1089777702

17Ga0081539_100763772

18Ga0074054_120834302

19Ga0066660_102584971

20Ga0075425_1006670122

21Ga0105244_104189621

22Ga0114129_114632521

23Ga0105243_127305041

24Ga0105248_120544081

25Ga0105237_103430841

26Ga0126313_117216862

27Ga0126380_106683972

28Ga0126384_114277941

29Ga0126382_107787001

30Ga0126379_137798492

31Ga0124844_12829111

32Ga0137384_108542502

33Ga0137384_110697211

34Ga0137361_114264851

35Ga0157298_100550551

36Ga0162650_1000653562

37Ga0164309_105937681

38Ga0164308_107420881

39Ga0157376_101102901

40Ga0132258_133611822

41Ga0132256_1003177331

42Ga0182033_104670651

43Ga0182038_112380911

44Ga0190266_105695992

45Ga0184638_11511591

46Ga0066669_114925282

47Ga0173482_102144821

48Ga0137408_11666712

49Ga0193705_10716662

50Ga0193730_10016737

51Ga0210382_101439572

52Ga0247788_11105441

53Ga0207694_106170601

54Ga0257163_10413692

55Ga0209325_10115782

56Ga0207780_10466911

57Ga0208984_10044281

58Ga0209076_10690222

59Ga0209466_10009658

60Ga0209466_10019941

61Ga0209488_105549542

62Ga0209526_104888491

63Ga0268264_123884422

64Ga0307299_100539972

65Ga0307284_103037002

66Ga0307495_102175501

67Ga0307497_101865141

68Ga0307505_102112232

69Ga0318516_104354612

70Ga0318528_101104462

71Ga0318542_102305551

72Ga0318561_100059731

73Ga0318572_103024511

74Ga0318572_107637221

75Ga0306917_101650833

76Ga0306917_111187761

77Ga0318493_105095742

78Ga0318500_100197401

79Ga0307468_1021967321

80Ga0318546_100713094

81Ga0318498_104922142

82Ga0318566_104143831

83Ga0318508_11029901

84Ga0318547_107644801

85Ga0318529_100902523

86Ga0318499_104248071

87Ga0318512_100241311

88Ga0318495_100570481

89Ga0318536_101625592

90Ga0306923_109912382

91Ga0310912_111250131

92Ga0310913_101574473

93Ga0310913_104410352

94Ga0310909_103465591

95Ga0318558_106076672

96Ga0315540_100302191

97Ga0318553_105490452

98Ga0315281_120939021

99Ga0307470_103870091

100Ga0373958_0039514_2_124

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1AF_2010_repII_A01DRAFT_10030844 2AF_2010_repII_A1DRAFT_100886161 3JGI1027J12803_1007821952 4JGI10216J12902_1000453831 5JGI12053J15887_101161091 6JGI24033J26618_10457341 7JGI25405J52794_100189051 8JGI25405J52794_100351832 9Ga0081539_100763772 10Ga0126313_117216862 11Ga0126382_107787001 12Ga0137384_108542502 13Ga0184638_11511591 14Ga0066669_114925282 15Ga0207780_10466911 16Ga0209076_10690222 17Ga0209466_10009658 18Ga0318528_101104462 19Ga0318561_100059731 20Ga0315540_100302191 21Ga0315281_120939021
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1Ga0318498_104922142 2JGI1027J12803_1007821952 3JGI12053J15887_101161091 4JGI25405J52794_100491951 5Ga0081539_100763772 6Ga0075425_1006670122 7Ga0114129_114632521 8Ga0126313_117216862 9Ga0137384_108542502 10Ga0182033_104670651 11Ga0066669_114925282 12Ga0173482_102144821 13Ga0210382_101439572 14Ga0257163_10413692 15Ga0207780_10466911 16Ga0209076_10690222 17Ga0209466_10009658 18Ga0209466_10019941 19Ga0209488_105549542 20Ga0307495_102175501 21Ga0318542_102305551 22Ga0307468_1021967321 23Ga0318495_100570481 24Ga0315540_100302191 25Ga0315281_120939021
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.93% β-sheet: 0.00% Coil/Unstructured: 45.07%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted Topology & Secondary Structure

Classification:

Globular

Signal Peptide:

Yes

Secondary Structure distribution:

α-helix: 54.93% β-sheet: 0.00% Coil/Unstructured: 45.07%

Feature Viewer

Position :

Zoom :

x 1

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Structure Viewer

Per-residue confidence (pLDDT):
0-50 51-70 71-90 91-100

pTM-score: 0.62

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF03631	Virul_fac_BrkB	34.00
PF01979	Amidohydro_1	22.00
PF00892	EamA	5.00
PF00672	HAMP	2.00
PF08240	ADH_N	2.00
PF03401	TctC	1.00
PF00398	RrnaAD	1.00
PF01642	MM_CoA_mutase	1.00
PF00221	Lyase_aromatic	1.00
PF02310	B12-binding	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	34.00
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	1.00
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	1.00
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	1.00
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.00

COG ID

Name

Functional Category

% Frequency in 100 Family Scaffolds

COG1295

Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)

Function unknown [S]

34.00

COG0030

16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)

Translation, ribosomal structure and biogenesis [J]

1.00

COG1884

Methylmalonyl-CoA mutase, N-terminal domain/subunit

Lipid transport and metabolism [I]

1.00

COG2986

Histidine ammonia-lyase

Amino acid transport and metabolism [E]

1.00

COG3181

Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC

Energy production and conversion [C]

1.00

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	59.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.00 %
Unclassified	root	N/A	40.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	42.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	42.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.00 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.00 %
Unclassified	root	N/A	40.00 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.00 %

Name

Rank

Taxonomy

Distribution

Alphaproteobacteria bacterium 13_2_20CM_2_64_7

species

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7

42.00 %

Bradyrhizobiaceae

family

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae

2.00 %

Hyphomicrobiaceae

family

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae

3.00 %

Unclassified

root

N/A

40.00 %

Xanthobacteraceae

family

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae

1.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	42.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.00 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.00 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	1.00 %
Unclassified	root	N/A	40.00 %

Name

Rank

Taxonomy

Distribution

Alphaproteobacteria bacterium 13_2_20CM_2_64_7

species

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7

42.00 %

Bradyrhizobiaceae

family

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae

2.00 %

Hyphomicrobiaceae

family

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae

3.00 %

Pseudolabrys

genus

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys

1.00 %

Unclassified

root

N/A

40.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	42.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.00 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.00 %
Unclassified	root	N/A	40.00 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	1.00 %

Name

Rank

Taxonomy

Distribution

Alphaproteobacteria bacterium 13_2_20CM_2_64_7

species

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7

42.00 %

Bradyrhizobiaceae

family

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae

2.00 %

Hyphomicrobiaceae

family

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae

3.00 %

Unclassified

root

N/A

40.00 %

unclassified Pseudolabrys

no rank

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys

1.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	42.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.00 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.00 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1.00 %
Unclassified	root	N/A	40.00 %

Name

Rank

Taxonomy

Distribution

Alphaproteobacteria bacterium 13_2_20CM_2_64_7

species

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7

42.00 %

Bradyrhizobiaceae

family

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae

2.00 %

Hyphomicrobiaceae

family

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae

3.00 %

Pseudolabrys sp. Root1462

species

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462

1.00 %

Unclassified

root

N/A

40.00 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1003084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2688	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10088616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	770	Open in IMG/M
3300000955\|JGI1027J12803_100782195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	559	Open in IMG/M
3300000956\|JGI10216J12902_100045383	Not Available	1274	Open in IMG/M
3300001661\|JGI12053J15887_10116109	Not Available	1436	Open in IMG/M
3300002155\|JGI24033J26618_1045734	Not Available	619	Open in IMG/M
3300002459\|JGI24751J29686_10093294	Not Available	627	Open in IMG/M
3300003911\|JGI25405J52794_10018905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1378	Open in IMG/M
3300003911\|JGI25405J52794_10035183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1048	Open in IMG/M
3300003911\|JGI25405J52794_10049195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	902	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

3300000580|AF_2010_repII_A01DRAFT_1003084

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales

2688

Open in IMG/M

3300000597|AF_2010_repII_A1DRAFT_10088616

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7

770

Open in IMG/M

3300000955|JGI1027J12803_100782195

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7

559

Open in IMG/M

3300000956|JGI10216J12902_100045383

Not Available

1274

Open in IMG/M

3300001661|JGI12053J15887_10116109

Not Available

1436

Open in IMG/M

3300002155|JGI24033J26618_1045734

Not Available

619

Open in IMG/M

3300002459|JGI24751J29686_10093294

Not Available

627

Open in IMG/M

3300003911|JGI25405J52794_10018905

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7

1378

Open in IMG/M

3300003911|JGI25405J52794_10035183

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7

1048

Open in IMG/M

3300003911|JGI25405J52794_10049195

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7

902

Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.00%
Host-Associated	Host-Associated	21.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	4.00%
Plants	Host-Associated → Plants	21.00%
Terrestrial	Environmental → Terrestrial	75.00%

Habitat	Taxonomy	Distribution
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.00%
Freshwater	Environmental → Aquatic → Freshwater	2.00%
Marine	Environmental → Aquatic → Marine	1.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.00%
Sediment	Environmental → Aquatic → Sediment	1.00%
Soil	Environmental → Terrestrial → Soil	74.00%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.00%
Lake	Environmental → Aquatic → Freshwater → Lake	1.00%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.00%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.00%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.00%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.00%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.00%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.00%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	1.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.00%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.00%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	4.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.00%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M

Showing 1 to 10 of 93 entries

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Geographical Distribution

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Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10030844	3300000580	Forest Soil	MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRR
AF_2010_repII_A1DRAFT_100886161	3300000597	Forest Soil	MLDQAQRRDAGAKLIALARAATQAVEALLVDATAAVRRRVMVDDQVVDRLLDR
JGI1027J12803_1007821952	3300000955	Soil	MLDKAQDRDAGAQLVARAREATQAAEAVLADATLAVRQRVTVDNRMDD
JGI10216J12902_1000453831	3300000956	Soil	MLDQAQRPDAAPKLVALAGEATQAADALLAEATAAVRRRVMVGERMVDELL
JGI12053J15887_101161091	3300001661	Forest Soil	MLDDAQRRDAGVKLLALAREATRAAEALLAEATAAVRGRVTVEGHMVEAL
JGI24033J26618_10457341	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQAQRSDAAPKLVALAREATQAADALLAEATAA
JGI24751J29686_100932942	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQAQRCGAAPRLVALAREATQAADALLAEATAAVRQRV
JGI25405J52794_100189051	3300003911	Tabebuia Heterophylla Rhizosphere	MLDXSEGRDDGAKLVALAREATLAAEALLGDATRAVRQRVTIDNQMVDRLLD
JGI25405J52794_100351832	3300003911	Tabebuia Heterophylla Rhizosphere	VLDKAQRRDAGVKLIALARQARDAVEALLGDATAAVRGRVSVDH
JGI25405J52794_100491951	3300003911	Tabebuia Heterophylla Rhizosphere	MLDKAQGRDDGAKLIAIAREATLAVEALLADATEAVRQRVTIDNQMDDRL
Ga0063454_1009002581	3300004081	Soil	MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVM
Ga0066820_10020952	3300005160	Soil	MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERMVDGLL
Ga0070676_107147572	3300005328	Miscanthus Rhizosphere	MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMVDE
Ga0070667_1000112671	3300005367	Switchgrass Rhizosphere	MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVMVDE
Ga0070665_1004619701	3300005548	Switchgrass Rhizosphere	MLDQAQRPDAAPKLVALAGEATQAADALLAEATAAVRRR
Ga0066903_1089777702	3300005764	Tropical Forest Soil	MLDHAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVD
Ga0081539_100763772	3300005985	Tabebuia Heterophylla Rhizosphere	MLDKGERRDAGVKLLAVTREATRTAEAVLADARA*
Ga0074054_120834302	3300006579	Soil	MLDQAQRPDAAPKLVALAQDATQAVDTLLAEATAAV
Ga0066660_102584971	3300006800	Soil	VLDKAQRRDAGVKLIALARQATEAVEALLADATAAVRGRVTVDHQMLDALL
Ga0075425_1006670122	3300006854	Populus Rhizosphere	MLDQAQRSGAAPRLVALAREATQAADALLAEATAAVRQRVTVDG
Ga0105244_104189621	3300009036	Miscanthus Rhizosphere	MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMIDERMV
Ga0114129_114632521	3300009147	Populus Rhizosphere	MLDKSQARDDGAKLVALAREATLAAETLLADATRAVRQRVTIDNQMVDRLLD
Ga0105243_127305041	3300009148	Miscanthus Rhizosphere	MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRV
Ga0105248_120544081	3300009177	Switchgrass Rhizosphere	MLDQAQRPDAAPKLVALARQATQAADALLAEATAAVRRRVTVDERMVD
Ga0105237_103430841	3300009545	Corn Rhizosphere	MLDQAQRSDAAPKLVALAREATQAADALLAEATAAV
Ga0126313_117216862	3300009840	Serpentine Soil	VLARETVVLDKAQRRDAGAKLIALARQAREAVEALLGDATAAVRGRVTVDHQVLDAL
Ga0126380_106683972	3300010043	Tropical Forest Soil	MVVLDKAQRRDAGAKLIALARQARDAVEALLADATA
Ga0126384_114277941	3300010046	Tropical Forest Soil	MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRR
Ga0126382_107787001	3300010047	Tropical Forest Soil	LASSRRIVVLDKAQRRDAEVELITQARRANDAVEALLANAT
Ga0126379_137798492	3300010366	Tropical Forest Soil	MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVLVDDQVVDQLLDR
Ga0124844_12829111	3300010868	Tropical Forest Soil	MLDQAQRRDAGAKLIALAHAATQAVEALLADATVTVS
Ga0137384_108542502	3300012357	Vadose Zone Soil	MLDQAEPRAAGADLVASSRAAVGAAEMLLGQATAAVRRRVTVDDQVVDRLFDRE
Ga0137384_110697211	3300012357	Vadose Zone Soil	MLDQAQRRDAGAKLIALARAATQAVGALLADATVAVRER
Ga0137361_114264851	3300012362	Vadose Zone Soil	MLDQAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVDDQVVDRL
Ga0157298_100550551	3300012913	Soil	MLDQAQRPDAAPQLVALAREATQAADALLAEATAAVRRRVM
Ga0162650_1000653562	3300012939	Soil	MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVTVGERIDDGLLDRE
Ga0164309_105937681	3300012984	Soil	MLDQAQRPDAAPKLVALAREASQAADALLAEATVAVRRR
Ga0164308_107420881	3300012985	Soil	MLDQAQRSDAAPRLVALAREATQAADALLAEATAVVRQR
Ga0157376_101102901	3300014969	Miscanthus Rhizosphere	MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRV
Ga0132258_133611822	3300015371	Arabidopsis Rhizosphere	MLDQAQRPDAAPKLVALAQDATQAVDTLLAEATAAVRKRV
Ga0132256_1003177331	3300015372	Arabidopsis Rhizosphere	MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERM
Ga0182033_104670651	3300016319	Soil	MLDKAERRDAGVKLIALAREASRAAEALLAEATAAVRQRVMVEDKVVDRLFDR
Ga0182038_112380911	3300016445	Soil	MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVD
Ga0190266_105695992	3300017965	Soil	MLDQAQRPDAAPKLVALAGEATQAADALLAEATAAVRR
Ga0184638_11511591	3300018052	Groundwater Sediment	MLDKAQRHDAGVKLVALAREATRVAEALLAEATTAVRQRVTV
Ga0066669_114925282	3300018482	Grasslands Soil	MLDQAQRRDAGAKLVALARAATQAVETLLADATAAVRRRGLGADQGVGRRLDRGQPATHGLHSVA
Ga0173482_102144821	3300019361	Soil	MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMIDERMVDG
Ga0137408_11666712	3300019789	Vadose Zone Soil	MLDQTQRRDAGAKLIALARAATQAVEAVLADATVAVRQR
Ga0193705_10716662	3300019869	Soil	MLDQAQRPDAAPKLVALAREATQAVDALLAEATAAVRKRVTVD
Ga0193730_10016737	3300020002	Soil	MLDQAQRPDAAPKLVALAREATHAVDALLADATAAV
Ga0210382_101439572	3300021080	Groundwater Sediment	MLDQAQRPDAAPKLVALAREATHAVDALLVDATAAV
Ga0247788_11105441	3300022901	Soil	MLDQAQRSDAALRLVALARESTQAADALLAEATAA
Ga0207694_106170601	3300025924	Corn Rhizosphere	MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMIDERMVDGLLDR
Ga0257163_10413692	3300026359	Soil	MLDQAQRPDAAPKLVALAQEATQAVDALLAEATAAVRKRVTVDNRMVDGLFD
Ga0209325_10115782	3300027050	Forest Soil	MLDKAQRRDAGAKLIALARAATQAVEALLVDATAAVRRRVMLDDQVVDRLLDR
Ga0207780_10466911	3300027313	Tropical Forest Soil	MSNAQRRDAGVTLLALAREATRACETLLAEATAAVRSRVTVEDRLVERS
Ga0208984_10044281	3300027546	Forest Soil	MLDQAQRPDAAPKLVALAREATQAVDALLAEATAAVRQRVTVDNRIVDALLD
Ga0209076_10690222	3300027643	Vadose Zone Soil	VVLDKAERPDAELIALARQAAQAAETLLDDATAAVRRRVTVDHRLDERLL
Ga0209466_10009658	3300027646	Tropical Forest Soil	MLDKAQRHDAGVKLIALAREATRAAETLLAEATAAVRQRVTVEGRVVDRMFDREQ
Ga0209466_10019941	3300027646	Tropical Forest Soil	MLDQAQRRDAGAKLTALARTATQAVEALVADATAAVRQ
Ga0209488_105549542	3300027903	Vadose Zone Soil	MLDKAERRDAGVKLLAVAREATRTAEALLAEATAAVRRRVTVEDKLVDGL
Ga0209526_104888491	3300028047	Forest Soil	LDKAQRRDAGVKLIALAREATCAAEQLLAEATAAV
Ga0268264_123884422	3300028381	Switchgrass Rhizosphere	MLDQAQRPDAAPKLVALARQATQAADALLAEATAAVRRRVTVDER
Ga0307299_100539972	3300028793	Soil	MLDQAQRPDAAPKLVALAREATHAVDALLADATAAVRK
Ga0307284_103037002	3300028799	Soil	MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERMVD
Ga0307495_102175501	3300031199	Soil	MLDKAQRRDAGVRLTAQAREATRAAEALLAEATAAVRKRVTADGHMV
Ga0307497_101865141	3300031226	Soil	MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERMV
Ga0307505_102112232	3300031455	Soil	MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERMVDGLL
Ga0318516_104354612	3300031543	Soil	MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVDDQ
Ga0318528_101104462	3300031561	Soil	VLDKAQRRDAEVELITQARRASEAVEALLANATAAVRQRVT
Ga0318542_102305551	3300031668	Soil	VLDKAQRRDAEVELITQARRASEAVEALLANATAAVRQRVTMDDE
Ga0318561_100059731	3300031679	Soil	MSDAQRRDAGVPLLALAREATRACETLLAEATAAV
Ga0318572_103024511	3300031681	Soil	MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVDDQVVDRLLDRE
Ga0318572_107637221	3300031681	Soil	VLDKAQRRDAEVELITQARRASEAVEALLANATAAVRQ
Ga0306917_101650833	3300031719	Soil	VLDKAQRRDAEVELITQARRASEAVEALLANATAAVRQRVTVDDEMVDALLD
Ga0306917_111187761	3300031719	Soil	MLDKAERRDAGVKLIALAREATRAGEALLAEATAAVRQRV
Ga0318493_105095742	3300031723	Soil	MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRQRVMVDDQ
Ga0318500_100197401	3300031724	Soil	MSDAQRRDAGVTLLALAREATRGCETLLAEATVAVRSRVTVEDRLVEHSLDRE
Ga0307468_1021967321	3300031740	Hardwood Forest Soil	MLDKAQRHDAGVKLVALAREATRVVETLLAEGIAAVRQRVTVEGRVVDRM
Ga0318546_100713094	3300031771	Soil	VLDKAQRRDAEVELITQARRASEAVEALLATATAAVRQRVTMDDE
Ga0318498_104922142	3300031778	Soil	MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVD
Ga0318566_104143831	3300031779	Soil	MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVD
Ga0318508_11029901	3300031780	Soil	MSDAQRRDAGVPLLALAREATRACETLLAEATAAVRS
Ga0318547_107644801	3300031781	Soil	MLDKAQRRGAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVDQLLD
Ga0318529_100902523	3300031792	Soil	MSDAQRRDAGVPLLALAREATRACETLLAEATVAVRSR
Ga0318499_104248071	3300031832	Soil	MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVGRRVMVDD
Ga0318512_100241311	3300031846	Soil	MSDAQRRDAGVPLLALAREATRACETLLAEATAAVRSRVTVE
Ga0318495_100570481	3300031860	Soil	MLDQAQRRDAGAKLIALAHAATQAVEALLADATVAVRQRVTIDHQVVDRL
Ga0318536_101625592	3300031893	Soil	MLDKAERRDAGVKLIALAREATRAAEALLAEATAAVRQRVMVEDKVVERLFD
Ga0306923_109912382	3300031910	Soil	MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVR
Ga0310912_111250131	3300031941	Soil	MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVDDQVVDRLL
Ga0310913_101574473	3300031945	Soil	MLDQAQRRDAGAKLIALAHAATQAVEALLADATVAVRQRVTIDHQVVDRLF
Ga0310913_104410352	3300031945	Soil	MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVD
Ga0310909_103465591	3300031947	Soil	MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVDRL
Ga0318558_106076672	3300032044	Soil	MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMV
Ga0315540_100302191	3300032061	Salt Marsh Sediment	MPIVASRPAAGHELVDLGREATAAVDALLADAAAR
Ga0318553_105490452	3300032068	Soil	MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVDQLL
Ga0315281_120939021	3300032163	Sediment	MSMLDKAGRRGAGDRLIAVAREAARAAEALLADATAAVRRRI
Ga0307470_103870091	3300032174	Hardwood Forest Soil	MLDQAQRPDAAPKLVALAREATQEADALLAEATAAVRRRV
Ga0373958_0039514_2_124	3300034819	Rhizosphere Soil	MLDQAQRPDAAPKLVAFAREATQAADALLAEATAAVRRRVT

Protein ID

Sample Taxon ID

Habitat

Sequence

AF_2010_repII_A01DRAFT_10030844

3300000580

Forest Soil

MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRR

AF_2010_repII_A1DRAFT_100886161

3300000597

Forest Soil

MLDQAQRRDAGAKLIALARAATQAVEALLVDATAAVRRRVMVDDQVVDRLLDR

JGI1027J12803_1007821952

3300000955

Soil

MLDKAQDRDAGAQLVARAREATQAAEAVLADATLAVRQRVTVDNRMDD

JGI10216J12902_1000453831

3300000956

Soil

MLDQAQRPDAAPKLVALAGEATQAADALLAEATAAVRRRVMVGERMVDELL

JGI12053J15887_101161091

3300001661

Forest Soil

MLDDAQRRDAGVKLLALAREATRAAEALLAEATAAVRGRVTVEGHMVEAL

JGI24033J26618_10457341

3300002155

Corn, Switchgrass And Miscanthus Rhizosphere

MLDQAQRSDAAPKLVALAREATQAADALLAEATAA

JGI24751J29686_100932942

3300002459

Corn, Switchgrass And Miscanthus Rhizosphere

MLDQAQRCGAAPRLVALAREATQAADALLAEATAAVRQRV

JGI25405J52794_100189051

3300003911

Tabebuia Heterophylla Rhizosphere

MLDXSEGRDDGAKLVALAREATLAAEALLGDATRAVRQRVTIDNQMVDRLLD

JGI25405J52794_100351832

3300003911

Tabebuia Heterophylla Rhizosphere

VLDKAQRRDAGVKLIALARQARDAVEALLGDATAAVRGRVSVDH

JGI25405J52794_100491951

3300003911

Tabebuia Heterophylla Rhizosphere

MLDKAQGRDDGAKLIAIAREATLAVEALLADATEAVRQRVTIDNQMDDRL

Ga0063454_1009002581

3300004081

Soil

MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVM

Ga0066820_10020952

3300005160

Soil

MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERMVDGLL

Ga0070676_107147572

3300005328

Miscanthus Rhizosphere

MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMVDE

Ga0070667_1000112671

3300005367

Switchgrass Rhizosphere

MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVMVDE

Ga0070665_1004619701

3300005548

Switchgrass Rhizosphere

MLDQAQRPDAAPKLVALAGEATQAADALLAEATAAVRRR

Ga0066903_1089777702

3300005764

Tropical Forest Soil

MLDHAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVD

Ga0081539_100763772

3300005985

Tabebuia Heterophylla Rhizosphere

MLDKGERRDAGVKLLAVTREATRTAEAVLADARA*

Ga0074054_120834302

3300006579

Soil

MLDQAQRPDAAPKLVALAQDATQAVDTLLAEATAAV

Ga0066660_102584971

3300006800

Soil

VLDKAQRRDAGVKLIALARQATEAVEALLADATAAVRGRVTVDHQMLDALL

Ga0075425_1006670122

3300006854

Populus Rhizosphere

MLDQAQRSGAAPRLVALAREATQAADALLAEATAAVRQRVTVDG

Ga0105244_104189621

3300009036

Miscanthus Rhizosphere

MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMIDERMV

Ga0114129_114632521

3300009147

Populus Rhizosphere

MLDKSQARDDGAKLVALAREATLAAETLLADATRAVRQRVTIDNQMVDRLLD

Ga0105243_127305041

3300009148

Miscanthus Rhizosphere

MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRV

Ga0105248_120544081

3300009177

Switchgrass Rhizosphere

MLDQAQRPDAAPKLVALARQATQAADALLAEATAAVRRRVTVDERMVD

Ga0105237_103430841

3300009545

Corn Rhizosphere

MLDQAQRSDAAPKLVALAREATQAADALLAEATAAV

Ga0126313_117216862

3300009840

Serpentine Soil

VLARETVVLDKAQRRDAGAKLIALARQAREAVEALLGDATAAVRGRVTVDHQVLDAL

Ga0126380_106683972

3300010043

Tropical Forest Soil

MVVLDKAQRRDAGAKLIALARQARDAVEALLADATA

Ga0126384_114277941

3300010046

Tropical Forest Soil

MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRR

Ga0126382_107787001

3300010047

Tropical Forest Soil

LASSRRIVVLDKAQRRDAEVELITQARRANDAVEALLANAT

Ga0126379_137798492

3300010366

Tropical Forest Soil

MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVLVDDQVVDQLLDR

Ga0124844_12829111

3300010868

Tropical Forest Soil

MLDQAQRRDAGAKLIALAHAATQAVEALLADATVTVS

Ga0137384_108542502

3300012357

Vadose Zone Soil

MLDQAEPRAAGADLVASSRAAVGAAEMLLGQATAAVRRRVTVDDQVVDRLFDRE

Ga0137384_110697211

3300012357

Vadose Zone Soil

MLDQAQRRDAGAKLIALARAATQAVGALLADATVAVRER

Ga0137361_114264851

3300012362

Vadose Zone Soil

MLDQAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVDDQVVDRL

Ga0157298_100550551

3300012913

Soil

MLDQAQRPDAAPQLVALAREATQAADALLAEATAAVRRRVM

Ga0162650_1000653562

3300012939

Soil

MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVTVGERIDDGLLDRE

Ga0164309_105937681

3300012984

Soil

MLDQAQRPDAAPKLVALAREASQAADALLAEATVAVRRR

Ga0164308_107420881

3300012985

Soil

MLDQAQRSDAAPRLVALAREATQAADALLAEATAVVRQR

Ga0157376_101102901

3300014969

Miscanthus Rhizosphere

MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRV

Ga0132258_133611822

3300015371

Arabidopsis Rhizosphere

MLDQAQRPDAAPKLVALAQDATQAVDTLLAEATAAVRKRV

Ga0132256_1003177331

3300015372

Arabidopsis Rhizosphere

MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERM

Ga0182033_104670651

3300016319

Soil

MLDKAERRDAGVKLIALAREASRAAEALLAEATAAVRQRVMVEDKVVDRLFDR

Ga0182038_112380911

3300016445

Soil

MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVD

Ga0190266_105695992

3300017965

Soil

MLDQAQRPDAAPKLVALAGEATQAADALLAEATAAVRR

Ga0184638_11511591

3300018052

Groundwater Sediment

MLDKAQRHDAGVKLVALAREATRVAEALLAEATTAVRQRVTV

Ga0066669_114925282

3300018482

Grasslands Soil

MLDQAQRRDAGAKLVALARAATQAVETLLADATAAVRRRGLGADQGVGRRLDRGQPATHGLHSVA

Ga0173482_102144821

3300019361

Soil

MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMIDERMVDG

Ga0137408_11666712

3300019789

Vadose Zone Soil

MLDQTQRRDAGAKLIALARAATQAVEAVLADATVAVRQR

Ga0193705_10716662

3300019869

Soil

MLDQAQRPDAAPKLVALAREATQAVDALLAEATAAVRKRVTVD

Ga0193730_10016737

3300020002

Soil

MLDQAQRPDAAPKLVALAREATHAVDALLADATAAV

Ga0210382_101439572

3300021080

Groundwater Sediment

MLDQAQRPDAAPKLVALAREATHAVDALLVDATAAV

Ga0247788_11105441

3300022901

Soil

MLDQAQRSDAALRLVALARESTQAADALLAEATAA

Ga0207694_106170601

3300025924

Corn Rhizosphere

MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMIDERMVDGLLDR

Ga0257163_10413692

3300026359

Soil

MLDQAQRPDAAPKLVALAQEATQAVDALLAEATAAVRKRVTVDNRMVDGLFD

Ga0209325_10115782

3300027050

Forest Soil

MLDKAQRRDAGAKLIALARAATQAVEALLVDATAAVRRRVMLDDQVVDRLLDR

Ga0207780_10466911

3300027313

Tropical Forest Soil

MSNAQRRDAGVTLLALAREATRACETLLAEATAAVRSRVTVEDRLVERS

Ga0208984_10044281

3300027546

Forest Soil

MLDQAQRPDAAPKLVALAREATQAVDALLAEATAAVRQRVTVDNRIVDALLD

Ga0209076_10690222

3300027643

Vadose Zone Soil

VVLDKAERPDAELIALARQAAQAAETLLDDATAAVRRRVTVDHRLDERLL

Ga0209466_10009658

3300027646

Tropical Forest Soil

MLDKAQRHDAGVKLIALAREATRAAETLLAEATAAVRQRVTVEGRVVDRMFDREQ

Ga0209466_10019941

3300027646

Tropical Forest Soil

MLDQAQRRDAGAKLTALARTATQAVEALVADATAAVRQ

Ga0209488_105549542

3300027903

Vadose Zone Soil

MLDKAERRDAGVKLLAVAREATRTAEALLAEATAAVRRRVTVEDKLVDGL

Ga0209526_104888491

3300028047

Forest Soil

LDKAQRRDAGVKLIALAREATCAAEQLLAEATAAV

Ga0268264_123884422

3300028381

Switchgrass Rhizosphere

MLDQAQRPDAAPKLVALARQATQAADALLAEATAAVRRRVTVDER

Ga0307299_100539972

3300028793

Soil

MLDQAQRPDAAPKLVALAREATHAVDALLADATAAVRK

Ga0307284_103037002

3300028799

Soil

MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERMVD

Ga0307495_102175501

3300031199

Soil

MLDKAQRRDAGVRLTAQAREATRAAEALLAEATAAVRKRVTADGHMV

Ga0307497_101865141

3300031226

Soil

MLDQAQRSDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERMV

Ga0307505_102112232

3300031455

Soil

MLDQAQRPDAAPKLVALAREATQAADALLAEATAAVRRRVMVDERMVDGLL

Ga0318516_104354612

3300031543

Soil

MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVDDQ

Ga0318528_101104462

3300031561

Soil

VLDKAQRRDAEVELITQARRASEAVEALLANATAAVRQRVT

Ga0318542_102305551

3300031668

Soil

VLDKAQRRDAEVELITQARRASEAVEALLANATAAVRQRVTMDDE

Ga0318561_100059731

3300031679

Soil

MSDAQRRDAGVPLLALAREATRACETLLAEATAAV

Ga0318572_103024511

3300031681

Soil

MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVDDQVVDRLLDRE

Ga0318572_107637221

3300031681

Soil

VLDKAQRRDAEVELITQARRASEAVEALLANATAAVRQ

Ga0306917_101650833

3300031719

Soil

VLDKAQRRDAEVELITQARRASEAVEALLANATAAVRQRVTVDDEMVDALLD

Ga0306917_111187761

3300031719

Soil

MLDKAERRDAGVKLIALAREATRAGEALLAEATAAVRQRV

Ga0318493_105095742

3300031723

Soil

MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRQRVMVDDQ

Ga0318500_100197401

3300031724

Soil

MSDAQRRDAGVTLLALAREATRGCETLLAEATVAVRSRVTVEDRLVEHSLDRE

Ga0307468_1021967321

3300031740

Hardwood Forest Soil

MLDKAQRHDAGVKLVALAREATRVVETLLAEGIAAVRQRVTVEGRVVDRM

Ga0318546_100713094

3300031771

Soil

VLDKAQRRDAEVELITQARRASEAVEALLATATAAVRQRVTMDDE

Ga0318498_104922142

3300031778

Soil

MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVD

Ga0318566_104143831

3300031779

Soil

MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVD

Ga0318508_11029901

3300031780

Soil

MSDAQRRDAGVPLLALAREATRACETLLAEATAAVRS

Ga0318547_107644801

3300031781

Soil

MLDKAQRRGAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVDQLLD

Ga0318529_100902523

3300031792

Soil

MSDAQRRDAGVPLLALAREATRACETLLAEATVAVRSR

Ga0318499_104248071

3300031832

Soil

MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVGRRVMVDD

Ga0318512_100241311

3300031846

Soil

MSDAQRRDAGVPLLALAREATRACETLLAEATAAVRSRVTVE

Ga0318495_100570481

3300031860

Soil

MLDQAQRRDAGAKLIALAHAATQAVEALLADATVAVRQRVTIDHQVVDRL

Ga0318536_101625592

3300031893

Soil

MLDKAERRDAGVKLIALAREATRAAEALLAEATAAVRQRVMVEDKVVERLFD

Ga0306923_109912382

3300031910

Soil

MLDKAQRRDAGAKLIALARAATQAVEALLADATAAVR

Ga0310912_111250131

3300031941

Soil

MLDKAQRRDAGAKLVALARAATQAVEALLADATAAVRRRVMVDDQVVDRLL

Ga0310913_101574473

3300031945

Soil

MLDQAQRRDAGAKLIALAHAATQAVEALLADATVAVRQRVTIDHQVVDRLF

Ga0310913_104410352

3300031945

Soil

MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVD

Ga0310909_103465591

3300031947

Soil

MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVDRL

Ga0318558_106076672

3300032044

Soil

MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMV

Ga0315540_100302191

3300032061

Salt Marsh Sediment

MPIVASRPAAGHELVDLGREATAAVDALLADAAAR

Ga0318553_105490452

3300032068

Soil

MLDQAQRRDAGAKLIALARAATQAVEALLADATAAVRRRVMVDDQVVDQLL

Ga0315281_120939021

3300032163

Sediment

MSMLDKAGRRGAGDRLIAVAREAARAAEALLADATAAVRRRI

Ga0307470_103870091

3300032174

Hardwood Forest Soil

MLDQAQRPDAAPKLVALAREATQEADALLAEATAAVRRRV

Ga0373958_0039514_2_124

3300034819

Rhizosphere Soil

MLDQAQRPDAAPKLVAFAREATQAADALLAEATAAVRRRVT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters