NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105110

Metagenome / Metatranscriptome Family F105110

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105110
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 69 residues
Representative Sequence MTADQTVERAANKLQRLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQG
Number of Associated Samples 94
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 88.24 %
% of genes near scaffold ends (potentially truncated) 33.00 %
% of genes from short scaffolds (< 2000 bps) 33.00 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (69.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(33.000 % of family members)
Environment Ontology (ENVO) Unclassified
(31.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.58%    β-sheet: 0.00%    Coil/Unstructured: 48.42%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01316Arg_repressor 37.00
PF02863Arg_repressor_C 32.00
PF09939DUF2171 7.00
PF07332Phage_holin_3_6 2.00
PF13240zinc_ribbon_2 1.00
PF00676E1_dh 1.00
PF00809Pterin_bind 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1438Arginine repressorTranscription [K] 69.00
COG05672-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymesEnergy production and conversion [C] 1.00
COG1071TPP-dependent pyruvate or acetoin dehydrogenase subunit alphaEnergy production and conversion [C] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A69.00 %
All OrganismsrootAll Organisms31.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101902790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria642Open in IMG/M
3300004643|Ga0062591_100927952All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300005171|Ga0066677_10531757All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300005177|Ga0066690_10544964All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300005178|Ga0066688_10383379All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300005180|Ga0066685_10601086All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300005467|Ga0070706_100561908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1061Open in IMG/M
3300005718|Ga0068866_10826641Not Available646Open in IMG/M
3300006605|Ga0074057_11977480All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300009137|Ga0066709_102208965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium758Open in IMG/M
3300010335|Ga0134063_10698283Not Available524Open in IMG/M
3300011269|Ga0137392_10193313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1662Open in IMG/M
3300012208|Ga0137376_11193215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium650Open in IMG/M
3300012356|Ga0137371_11313449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium535Open in IMG/M
3300012532|Ga0137373_10725275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium739Open in IMG/M
3300012941|Ga0162652_100035734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium764Open in IMG/M
3300012989|Ga0164305_10386972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1066Open in IMG/M
3300013294|Ga0120150_1061690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium719Open in IMG/M
3300017657|Ga0134074_1238873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium651Open in IMG/M
3300018028|Ga0184608_10353476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium645Open in IMG/M
3300018051|Ga0184620_10261543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300018054|Ga0184621_10225539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium670Open in IMG/M
3300019869|Ga0193705_1087257All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300025910|Ga0207684_10520607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1019Open in IMG/M
3300028536|Ga0137415_10228488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1673Open in IMG/M
3300028716|Ga0307311_10205845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria578Open in IMG/M
3300028721|Ga0307315_10003645All Organisms → cellular organisms → Bacteria3749Open in IMG/M
3300028744|Ga0307318_10301355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium562Open in IMG/M
3300028771|Ga0307320_10074129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1275Open in IMG/M
3300028802|Ga0307503_10304805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium800Open in IMG/M
3300028885|Ga0307304_10236293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium792Open in IMG/M
3300028885|Ga0307304_10286700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300031184|Ga0307499_10335139Not Available508Open in IMG/M
3300031198|Ga0307500_10258950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil33.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil12.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.00%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011000Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012001Permafrost microbial communities from Nunavut, Canada - A24_80cm_12MEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013294Permafrost microbial communities from Nunavut, Canada - A3_65cm_0MEnvironmentalOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026933Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028704Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379EnvironmentalOpen in IMG/M
3300028709Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deepsgr_029476102199352025SoilMTADQTVERAANKLRQLADQMAGEGGIKAKLAQPLAEDADFIRKMKPSLIKARAQGEAPTNQKPGEATVLRRARN
INPhiseqgaiiFebDRAFT_10190279033300000364SoilMTGDQTVERAADTLQRFANQLAGEGGLKAKLAAPLADDATLIRKMKPSLIKARAKGEAPTNQKP
Ga0062593_10201160513300004114SoilMSTADQTVERAAAKLQEYANKLAAEGGAKAKLADTLAEDADLIRKMKPSQIKARAKGEAPTDSKPGATTIPP
Ga0063455_10015141843300004153SoilMTTADQKVERAANKLQQVANDLAGEGGLKAKLAEPLAEDADLIRKMKPSLIKARAKGGAPTNLKPGSA
Ga0062595_10234921013300004479SoilMTADQTVERAANKLRHLADQMAGEGGIKAKLAQPLAEDADFIRKMKPSLIKARAKGEAP
Ga0062591_10092795213300004643SoilMTADQTVEHAANKLQGLAKHLAGEGGFKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNQKPGRPTVAPSG
Ga0062591_10160445813300004643SoilMKAADKKVEQAADKVQELANRMAGEGGSKAKLAEPLAEDADLIRRMKPSLIKARIKGEAPTDQKPGETVIAPSGPQL
Ga0062591_10253573133300004643SoilMTVDQTVDRAADKLKELANHMAGEGGLKAKLAEPLAEDAELLRKMKPSLIKARARGERPTNQK
Ga0066674_1034019613300005166SoilMTTGDQKVERLADKLQQLADRSAADGGTKAKLAQPLADDAEFVRKLKLSLIKARAKGEAP
Ga0066677_1053175733300005171SoilMTTADQKVERAANKLQQLANQLAGEGGVRAKLAEPLAEDADLIRKMKPSLIKARAKGE
Ga0066690_1054496413300005177SoilMTTADQKVEHAADKLQSLSSQLAAEGGLKAKFAEPLAEDADLIRKMKPSLIKARAKGEAPTNLEP
Ga0066688_1038337933300005178SoilMTTADQKVERAASKLQGLANQLAAEGGLKAKLAEPLAEDADLIRKMKPSLIKARAQG
Ga0066685_1060108633300005180SoilMTADQTVDRVADKLQKLANQMAGEGGLKAKLAEPLAEDAELLRKMKPSLIKARAKGEAPTNHKPAKPRLAPSSPQLGARP
Ga0065705_1041568813300005294Switchgrass RhizosphereMTTADQKVDSAADKLEGLANDLAAEGGLKAKLAEPLAEDAGLIRKMKPSLIKARAKGEA
Ga0070671_10160044313300005355Switchgrass RhizosphereMTADQTVERAAAKLQQLANQWAGESGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQG
Ga0070659_10129595313300005366Corn RhizosphereMTTADQKVERAANKLQQVANNLAGEGGIKGKLAEPLAEDADLIRKMKPSLIKARAKG
Ga0070694_10166936513300005444Corn, Switchgrass And Miscanthus RhizosphereMTADQTVERAANKLRQLAGQMAGEGGIKAKLAQPLAEDADFIRKMKPSLIKARAKGEAPT
Ga0070706_10056190813300005467Corn, Switchgrass And Miscanthus RhizosphereMTPADQKVERTANRLQRLANELAGEGGLKAKLAEPLAADADLIRKMKPSLIMARAKG
Ga0070679_10177077923300005530Corn RhizosphereMTADQKVERAAKKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSSPQLG
Ga0070686_10122005433300005544Switchgrass RhizosphereMTADQTVERAASKLQQLANQWAGESGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSGPQLGH
Ga0070665_10252380913300005548Switchgrass RhizosphereMTADQTVERAASKLQQLANQWAGESGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVA
Ga0066661_1055467033300005554SoilMTTADQRVERAANKLQRLANQLAGEGGVKGKLAEPLTEDADLIRKMKPSLIKARAKGEAPTNQKPGKPTL
Ga0066707_1016451633300005556SoilMTADQTVERAAAKLQQLANQFAAEGGLKSKLAQPLAEDADLIRKMKPSLIKARARGEAPTNQKP*
Ga0066670_1091040313300005560SoilMTADQTVDRAADKLQELANQLAGEGGLKAKLSEPLAGDADLIRKMKPSLIKARAR
Ga0066703_1028584413300005568SoilMTADQTVERAAAKLQQLANQFAGEGGLKSKLAQPLAEDADLIRKMKPSLIKARAKG
Ga0068866_1082664123300005718Miscanthus RhizosphereMTADQTVERAASKLQHLANQWAGESGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPG*
Ga0066652_10194926423300006046SoilMTADQTVERAASKLQQLANQLAGEGGLKSKLAQPLAEDADLIRKMKPSLIKARARGEAPTNQKPGQATVAPASPQLGSR
Ga0074057_1197748013300006605SoilMTADQTVERAATKLQQLADQWAGESGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSGPQLGHRKKKKCAG
Ga0066659_1163775123300006797SoilMTADQTVERAAAKLQQLANQFAGEGGLKSKLAQPLAEDADLIRKMKPSLIKARARGEAPTNQKPGRPV
Ga0105098_1032066543300009081Freshwater SedimentVNRADQLVDQAADRLQEFADEAAAEGGLKAKLAEPLADDAALLRRMKPSLIKARFRGEAPTDLPPSHGTV
Ga0066709_10220896533300009137Grasslands SoilMTTADQKVERAANKLQQLANQLAGEGGVKAKLAEPLAEDADLIRKMKPSLIKARARGEAPTNQ
Ga0105242_1100437813300009176Miscanthus RhizosphereMTADQTVERAASKLQQLANQWAGESGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLK
Ga0105237_1215008513300009545Corn RhizosphereMTADQTVERAANKLRQLAGQMAGEGGIKAKLAQPLAEDADFIRKMKPSLIKARAKGEAPTNQ
Ga0126382_1182126533300010047Tropical Forest SoilMSTADHRVDQAAGKVQDLADRMAGEEGVKAKLADPLAEDADLLRRMKPSLIKARMHGEA
Ga0134063_1069828313300010335Grasslands SoilMTTADHKVERAANKLQQLANQLAGEGGVKAKLAEPLAEDADLIRKMKPSLIKARAKGDAPKNQKPGPPTLPPSSAQLGKRPKPKSS
Ga0134062_1028151723300010337Grasslands SoilMSADQTVDRVADKLQELANQMAGEGGLKAKLAEPLAEDAELIRRMKPSLIKARARGRAPTNHKPG
Ga0134123_1074475113300010403Terrestrial SoilMTADQTVERAANKLRQLAGQMAGEGGIKAKLAQPLAEDADFIRKMKPSLIKARAKGEAPTNQKP
Ga0138513_10002760923300011000SoilMKAADQKVDQAADKVQELANRMAGEGGSKAKLAEPLAEDADLIRRMKPSLIKARAK
Ga0137392_1019331353300011269Vadose Zone SoilMTADQTVERAAAKLQRLANQFAGEGGLKSKLAQPLAEDADLIRKMKPSLIKARARGEAAK
Ga0120167_101731653300012001PermafrostMTADQKVERAANKLQRLANQLAGEGGLKSKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGT
Ga0137376_1119321523300012208Vadose Zone SoilMTTADQKVEHAANKLQSLANEMAAEGGLKAKLAEPLADDADLIRKMKPSLIKARAKGEPPAAGAQPLAPKGPQLSA
Ga0137371_1131344913300012356Vadose Zone SoilMTADQTVERAANRLQQLANQLAGEGGLKSKLAQPLAEDADFIRKMKPSLIRARATGEAPTNQQPGQATVAPSSPQIGG
Ga0137384_1026030513300012357Vadose Zone SoilMTADQTVERAASKLQQLANQFAGEGGLKSKLAQPLAEDADLIRKMKPSLIKARARGEARTNQKPPKG
Ga0137368_1047508933300012358Vadose Zone SoilMTTADQKVERAANKLQQLANQLAGEGGVKAKLAAPLAEDADLIRKMKPSLIKARAKGE
Ga0137373_1072527533300012532Vadose Zone SoilMTADQTVERAANKLQRLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGHGTVAPS
Ga0162652_10003573433300012941SoilMTTADQKVERAANKLQQVANDLAGEGGIKAKLAEPLAEDADLIRKMKPSLIKARAKGEAPTNQQPGGAPLAPSN
Ga0164305_1038697213300012989SoilMTADQTVERAATKLQQLANQWAGESGLKGKLAQPLAEDSDLIRKMKPSLIKARARGEAPTNLKPGQGTIAPSGPQLGARKKKKGAG
Ga0120150_106169023300013294PermafrostMTADQTVERAAKKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSSPQLGARPKT
Ga0120127_1004229613300013503PermafrostMTADQKVERAAGKLQQLANQFAGEGGLKAKLAEPLAEDADLIRKMKPSLIKARAKGEPPTNERPGE
Ga0134075_1049441023300014154Grasslands SoilMTADQTVERAANKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARARGEAPTDLKPGQGAVAPSSRQ
Ga0137418_1040872613300015241Vadose Zone SoilMTADQTVERAAAKLQQLANRFAGEGGLKSKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNQKPGRPVVAPSS
Ga0134072_1010627113300015357Grasslands SoilMTADQTVERAANKLQQLANQLAGEGGVKAKLAEPLAEDADLIRKMKPSLIKARAKGEAPTNQKPGQT
Ga0134089_1054987833300015358Grasslands SoilMTADQTVERAANKLQQLANQLAGEGGLKSKLAQPLAEDADFIRKMKPSLIRARAKGEAPTNQQPGQATVA
Ga0134074_123887313300017657Grasslands SoilMTADQTVERAANKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARARGEAPTNQKPGRPVVAPSSPQI
Ga0184610_126572223300017997Groundwater SedimentMTADQTVERAANKLRKLANQMAGEGGVKAKLAQPLAEDADLIRKMKPSLIKARATGEAP
Ga0184608_1035347613300018028Groundwater SedimentMTADQTVERAANKLQQLANQLAGEGGLKSKLAQQLAEDADLIRKMKPSLIKARAKGEAP
Ga0184620_1026154333300018051Groundwater SedimentMTTADRKVERAANKLQQLASNLAGEGGLKAKLAEPLAEDADLIRKMKPSLIKARAKGEAPTNQKPG
Ga0184621_1022553913300018054Groundwater SedimentMTTADRKVERAANKLQQLASNLAGEGGLKAKLAEPLAEDADLIRKMKPSLIKARAKGEAPTNQKPGSAP
Ga0184617_111555923300018066Groundwater SedimentMTADQKVERAATKLQRLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSS
Ga0066662_1194637923300018468Grasslands SoilMTADQTVERAASKLQQLANQLAGEGGWRSKLAQPLAEDADLIRKMKPSLIKARAKGKAPA
Ga0193704_106500113300019867SoilMTADQTVERAANKLQQLANQLAGEGGLKSKLAQQLAEDADLIRKMKPSLIKARAKGEAPTNQKPGQATVAPSSPQI
Ga0193705_108725713300019869SoilMTTADRKVERAANKLQQLASNLAGEGGLKAKLAEPLAEDADLIRKMKPSLIKARAKGEAATNQKPGSAPIAPSSPQLGKRPK
Ga0193700_103856213300019873SoilMTADQKVERAARKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPMNLKPGQGTVAPSSPQLGAR
Ga0193701_104025413300019875SoilMTTADQSVERAANKLQQLANDLAEEGGLKAKLAEPLAEDADLIRKMKPSLIKARAKGEAPTNQKP
Ga0193723_114016423300019879SoilMTADQKVERAARKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKG
Ga0179589_1018111223300024288Vadose Zone SoilMTADQTVERAANKLRQLADQMAGEGGVKAKLAQPLAEDAGLIRKMKPSLIKARAKGEAPTNQKPGQAT
Ga0207642_1040953413300025899Miscanthus RhizosphereMTADQTVERAANKLRQLAGQMAGEGGIKAKLAQPLAEDADFIRKMKPSLIKARAKGEAPTNQKPGQAPVAPSSPQ
Ga0207684_1052060743300025910Corn, Switchgrass And Miscanthus RhizosphereMTPADQKVERTANRLQRLANELAGEGGLKAKLAEPLAADADLIRKMKPSLIMARAKGRAPTNQKPGRP
Ga0207690_1144581813300025932Corn RhizosphereMTTADQKVERAANKLQQVANNLAGEGGIKGKLAEPLAEDADLIRKMKPSLIKARAKGDAPTNQKPGRAPLAP
Ga0207670_1019031943300025936Switchgrass RhizosphereMTADQTVERAANKLRQLAGQMAGEGGIKAKLAQPLAEDADFIRKMKPSLIKARAKGEAPTNQKPGQAPVAPSSPQLGAR
Ga0209159_111580013300026343SoilMTADQTVERAANKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGPAQPPVHDGG
Ga0207578_100861523300026933SoilMTADQTVERAANKLRQLAGQMAGEGGIKAKLAQPLAEDADFIRKMKPSLIKARAKGEAPTNQKPGQAPVAPSSPQLGARPK
Ga0137415_1022848813300028536Vadose Zone SoilMTADQTVERAAAKLQQLANQFAGQGGLKSKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNQKPGRTVVAPSSPQIGGSRPKAKKS
Ga0307321_104611713300028704SoilMTADQKVERAARKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSSPQLGARPK
Ga0307279_1000105213300028709SoilMTADQKVERAARKLQQLANQLAGEGGLKSKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSSPQLGAR
Ga0307309_1001121243300028714SoilMTADQKVERAARKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLK
Ga0307313_1011979213300028715SoilMTADQTVERAANKLQQLANQLAGEGGLRSKLAQPLAEDADLIRKMKPSLIKARAKGEAPT
Ga0307313_1026702123300028715SoilMTADQKVERAARKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPMNLKPGQGT
Ga0307311_1020584513300028716SoilMTTADQKVESAANKLQQLANDLAGEGGLKAKLAEPLAEDADLIRKMKPSLIKARAKGEAPTNQKPGKPT
Ga0307317_1019168213300028720SoilMTADQKVERAARKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAP
Ga0307315_1000364563300028721SoilMTADQTVERAANKLRKLANQMAGEGGVKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNQKPGQATVAPSSPQLGARPKPKK
Ga0307318_1030135523300028744SoilMTADQKVERAANKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPTLIKARAKGEAPVNLKPGQGTVAPSSPQLGARPKAKT
Ga0307316_1015610323300028755SoilMTADQKVERAARKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGT
Ga0307320_1007412913300028771SoilMTADQTVERAANKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPTLIKARAKGEA
Ga0307320_1017781123300028771SoilMTADQTVERAANKLQRLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQG
Ga0307282_1009861343300028784SoilMTADQTVERAAKKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTDLKPGHG
Ga0307323_1029276633300028787SoilMTADQKVERAANKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPTLIKARAKGEAPVNLKPGQGTVAPSSHSS
Ga0307290_1039173323300028791SoilMTADQKVERAARKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEA
Ga0307287_1030005213300028796SoilMTADQKVERAATKLQRLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTLAPSGPQLGA
Ga0307503_1030480513300028802SoilMTADQTVERAATKLQQLANQWAGESGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSGPQLGRKKKKG
Ga0307302_1003781113300028814SoilMTTADRKVERAANKLQQLASNLAGEGGLKAKLAEPLAEDADLIRKMKPSLIKARAKGEAATNQKPGSAPI
Ga0307302_1012558443300028814SoilMTADQKVERAANKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPTLIKARAKGEAPVNLKPGQGT
Ga0307310_1003389443300028824SoilMTTADQKVESAANKLQQLANDLAGEGGLKAKFAEPLAEDADLIRKMKPSLIKARAKGEAPTNQKPGKPALAPS
Ga0307312_1035132813300028828SoilMTADQTVERAANKLQQLANQLAGEGGLRSKLAQPLAEDADLIRKMKPSLIKARARGEAPAAKPGQATVAPSR
Ga0307289_1048948123300028875SoilMTADQTVERAANKLRQLADQMAGEGGFKAKLAQPLAEDADFIRKMKPSLIKARAKGEAPTSQKPGQVT
Ga0307304_1023629333300028885SoilMTTADQKVESAANKLQQLANDLAGEGGLKAKLAEPLAEDADLIRKMKPSLIKARAKGEAPTNQKPGKPALAPSSPQLGKRPR
Ga0307304_1028670023300028885SoilMTADQKVERAARKLQQLANQLAGEGGLKAKLAQPLAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSSPQLGARPKARKGA
Ga0307499_1033513923300031184SoilMTADQTVERAANKLRQLAGQMAGEGGVKARLAQPLAEDADFIRKMKPSLIKARVKGEAPIDPKPGQAPVAPSSPQLGERPKPK
Ga0307500_1025895023300031198SoilMTADQTVERAANKLRQLAGQMAGEGGVKAKLAQPLAEDADFIRKMKPSLIKARIKGEAPTSQKPGQAPVAPSSPQLGARPKTKKKP
Ga0307497_1042321233300031226SoilMTADQTVERAATKLEQLANQWAGESGLKAKLAQPFAEDADLIRKMKPSLIKARAKGEAPTNLKPGQGTVAPSGPQL


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