NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105104

Metagenome Family F105104

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105104
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 47 residues
Representative Sequence MLHHIYYINPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEEEA
Number of Associated Samples 77
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 81.00 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 82.00 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (81.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(26.000 % of family members)
Environment Ontology (ENVO) Unclassified
(78.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(98.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.11%    β-sheet: 27.63%    Coil/Unstructured: 55.26%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.58.5.3: ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domaind1nh8a21nh80.82828
d.58.5.2: Divalent ion tolerance proteins CutA (CutA1)d2nuha_2nuh0.82763
d.58.5.2: Divalent ion tolerance proteins CutA (CutA1)d3opka_3opk0.80971
c.135.1.1: NIF3 (NGG1p interacting factor 3)-liked2gx8a12gx80.80147
e.57.1.1: Vacuolar ATP synthase subunit Cd1u7la_1u7l0.79025


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A81.00 %
All OrganismsrootAll Organisms19.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000256|LP_F_10_SI03_120DRAFT_1008547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium3012Open in IMG/M
3300002482|JGI25127J35165_1023543All Organisms → Viruses → Predicted Viral1462Open in IMG/M
3300002514|JGI25133J35611_10067194Not Available1142Open in IMG/M
3300002518|JGI25134J35505_10068993Not Available832Open in IMG/M
3300005400|Ga0066867_10123193Not Available974Open in IMG/M
3300005400|Ga0066867_10237508Not Available661Open in IMG/M
3300005430|Ga0066849_10117196Not Available1055Open in IMG/M
3300005516|Ga0066831_10072989Not Available928Open in IMG/M
3300005521|Ga0066862_10205038Not Available651Open in IMG/M
3300005837|Ga0078893_10064080Not Available4163Open in IMG/M
3300006620|Ga0101444_108039Not Available2099Open in IMG/M
3300006751|Ga0098040_1110713Not Available823Open in IMG/M
3300006867|Ga0075476_10321675Not Available539Open in IMG/M
3300006868|Ga0075481_10218794Not Available677Open in IMG/M
3300006921|Ga0098060_1080901Not Available932Open in IMG/M
3300007229|Ga0075468_10215875Not Available554Open in IMG/M
3300007276|Ga0070747_1029894Not Available2168Open in IMG/M
3300007541|Ga0099848_1090159All Organisms → Viruses → Predicted Viral1186Open in IMG/M
3300008050|Ga0098052_1216583Not Available740Open in IMG/M
3300009071|Ga0115566_10259523Not Available1037Open in IMG/M
3300009077|Ga0115552_1417123Not Available529Open in IMG/M
3300009426|Ga0115547_1200716Not Available628Open in IMG/M
3300010151|Ga0098061_1211130Not Available685Open in IMG/M
3300010300|Ga0129351_1138648Not Available964Open in IMG/M
3300012928|Ga0163110_11525332Not Available542Open in IMG/M
3300012953|Ga0163179_10605989Not Available919Open in IMG/M
3300012953|Ga0163179_10694823Not Available863Open in IMG/M
3300017697|Ga0180120_10021798Not Available2994Open in IMG/M
3300017705|Ga0181372_1079872Not Available555Open in IMG/M
3300017705|Ga0181372_1094608Not Available508Open in IMG/M
3300017706|Ga0181377_1010331Not Available2250Open in IMG/M
3300017709|Ga0181387_1005125All Organisms → cellular organisms → Bacteria2573Open in IMG/M
3300017709|Ga0181387_1041929Not Available906Open in IMG/M
3300017709|Ga0181387_1082414Not Available652Open in IMG/M
3300017709|Ga0181387_1092197Not Available617Open in IMG/M
3300017720|Ga0181383_1008438All Organisms → cellular organisms → Bacteria2764Open in IMG/M
3300017720|Ga0181383_1008481Not Available2758Open in IMG/M
3300017720|Ga0181383_1030343All Organisms → Viruses → Predicted Viral1457Open in IMG/M
3300017720|Ga0181383_1049221Not Available1131Open in IMG/M
3300017732|Ga0181415_1142159Not Available537Open in IMG/M
3300017735|Ga0181431_1084648All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300017738|Ga0181428_1083147Not Available747Open in IMG/M
3300017745|Ga0181427_1103415Not Available695Open in IMG/M
3300017746|Ga0181389_1058797All Organisms → Viruses → Predicted Viral1107Open in IMG/M
3300017757|Ga0181420_1093825Not Available928Open in IMG/M
3300017757|Ga0181420_1178534Not Available624Open in IMG/M
3300017760|Ga0181408_1194094Not Available516Open in IMG/M
3300017764|Ga0181385_1049212Not Available1313Open in IMG/M
3300017767|Ga0181406_1251194Not Available519Open in IMG/M
3300017768|Ga0187220_1012340All Organisms → cellular organisms → Bacteria2575Open in IMG/M
3300017768|Ga0187220_1176870Not Available644Open in IMG/M
3300017776|Ga0181394_1274711Not Available501Open in IMG/M
3300017949|Ga0181584_10032127Not Available3781Open in IMG/M
3300017951|Ga0181577_10645052Not Available649Open in IMG/M
3300017956|Ga0181580_10318109All Organisms → Viruses → Predicted Viral1055Open in IMG/M
3300017956|Ga0181580_10652006Not Available674Open in IMG/M
3300017956|Ga0181580_10716872Not Available635Open in IMG/M
3300017962|Ga0181581_10021242Not Available4815Open in IMG/M
3300017962|Ga0181581_10357414Not Available926Open in IMG/M
3300017967|Ga0181590_10466758Not Available885Open in IMG/M
3300017967|Ga0181590_10552943Not Available794Open in IMG/M
3300017968|Ga0181587_10759369Not Available608Open in IMG/M
3300017969|Ga0181585_10796497Not Available612Open in IMG/M
3300018039|Ga0181579_10608876Not Available564Open in IMG/M
3300018428|Ga0181568_10520733Not Available945Open in IMG/M
3300019751|Ga0194029_1057281Not Available649Open in IMG/M
3300020165|Ga0206125_10062962Not Available1722Open in IMG/M
3300020378|Ga0211527_10226646Not Available515Open in IMG/M
3300020400|Ga0211636_10025063Not Available2682Open in IMG/M
3300020403|Ga0211532_10185322Not Available837Open in IMG/M
3300020409|Ga0211472_10468125Not Available506Open in IMG/M
3300020414|Ga0211523_10125025All Organisms → Viruses → Predicted Viral1081Open in IMG/M
3300020428|Ga0211521_10071937All Organisms → Viruses → Predicted Viral1721Open in IMG/M
3300020428|Ga0211521_10111817All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1308Open in IMG/M
3300020438|Ga0211576_10541539Not Available585Open in IMG/M
3300020440|Ga0211518_10074547All Organisms → Viruses → Predicted Viral1857Open in IMG/M
3300020440|Ga0211518_10145025All Organisms → Viruses → Predicted Viral1208Open in IMG/M
3300020448|Ga0211638_10624296Not Available506Open in IMG/M
3300020473|Ga0211625_10051564Not Available2530Open in IMG/M
3300020474|Ga0211547_10602445Not Available544Open in IMG/M
3300022164|Ga0212022_1060269Not Available585Open in IMG/M
3300022198|Ga0196905_1044405All Organisms → Viruses → Predicted Viral1284Open in IMG/M
3300022200|Ga0196901_1012930All Organisms → Viruses → Predicted Viral3491Open in IMG/M
(restricted) 3300022931|Ga0233433_10116695Not Available1276Open in IMG/M
3300023116|Ga0255751_10522347Not Available555Open in IMG/M
3300023117|Ga0255757_10039235Not Available3313Open in IMG/M
3300025072|Ga0208920_1004810Not Available3185Open in IMG/M
3300025127|Ga0209348_1084956All Organisms → Viruses → Predicted Viral1004Open in IMG/M
3300025127|Ga0209348_1093915Not Available941Open in IMG/M
3300025127|Ga0209348_1167094Not Available637Open in IMG/M
3300025127|Ga0209348_1205408Not Available547Open in IMG/M
3300025132|Ga0209232_1047176Not Available1588Open in IMG/M
3300025141|Ga0209756_1058795Not Available1830Open in IMG/M
3300025141|Ga0209756_1123021Not Available1082Open in IMG/M
3300025141|Ga0209756_1152487Not Available929Open in IMG/M
3300025151|Ga0209645_1022832All Organisms → Viruses → Predicted Viral2364Open in IMG/M
3300025892|Ga0209630_10314536Not Available706Open in IMG/M
3300026257|Ga0208407_1227097Not Available537Open in IMG/M
3300029319|Ga0183748_1075706Not Available848Open in IMG/M
3300029319|Ga0183748_1123967Not Available554Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine26.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater21.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh15.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine15.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous8.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.00%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.00%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water2.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.00%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.00%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000256Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - ample_F_10_SI03_120EnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300005400Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261EnvironmentalOpen in IMG/M
3300005430Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69EnvironmentalOpen in IMG/M
3300005516Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49BEnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006620Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ10 time pointEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017735Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018039Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020378Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)EnvironmentalOpen in IMG/M
3300020400Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020409Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020440Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)EnvironmentalOpen in IMG/M
3300020448Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)EnvironmentalOpen in IMG/M
3300020473Marine microbial communities from Tara Oceans - TARA_B100000700 (ERX555932-ERR598948)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300022164Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022931 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300023117Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaGEnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026257Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
LP_F_10_SI03_120DRAFT_100854783300000256MarineMLHRIYYTNPSGADNYMIVPFDEIKGTVTFLESLDYEVVSYWPIEAEG*
JGI25127J35165_102354353300002482MarineHHIYYINANGADNYMIVPFDEIDLTVAFLESLDHEVVAYWPIEEEA*
JGI25133J35611_1006719413300002514MarineMLHRIXYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEA*
JGI25134J35505_1006899313300002518MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVAFLESLDYEVVAYWPIEAEA*
Ga0066867_1012319333300005400MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVAFLESLDYEVVSYWPIEAEG*
Ga0066867_1023750823300005400MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEA*
Ga0066849_1011719613300005430MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEGEG*
Ga0066831_1007298923300005516MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVSYWPIEAEG*
Ga0066862_1020503823300005521MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEG*
Ga0078893_1006408063300005837Marine Surface WaterMLHHIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIQEEAQTWEQ*
Ga0101444_10803953300006620Marine Surface WaterMLHHIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIQEEA*
Ga0098040_111071333300006751MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWSIEGEE*
Ga0075476_1032167533300006867AqueousYYINPEGADNYMIVPFDEIKATVAFLESLDYEVIASWPIEEAA*
Ga0075481_1021879413300006868AqueousHHIYYINPEGADNYMIVPFDEIKATVAFLESLDYEVIASWPIEEAA*
Ga0098060_108090113300006921MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDY
Ga0075468_1021587513300007229AqueousMLHHIYYINPAGADNYMIVPFDEIKGTVTFLESLDY
Ga0070747_102989453300007276AqueousYINKYGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEEEA*
Ga0099848_109015923300007541AqueousMLHHIYYINPEGADNYMIVPFDEIKATVAFLESLDYEVIAYWPIEEAA*
Ga0098052_121658323300008050MarineMLHHIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIETEE*
Ga0115566_1025952313300009071Pelagic MarineMLHHIYYINKYGADNYMIVPFDEIKGTVTFLESLDYDVVAYWPIEEEA*
Ga0115552_141712313300009077Pelagic MarineMLHHIYYINKYGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEEEA*
Ga0115547_120071613300009426Pelagic MarineMLHHIYYINTAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEEEA*
Ga0098061_121113023300010151MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYDVVAYWPIEAEG*
Ga0129351_113864813300010300Freshwater To Marine Saline GradientMLHHIYYINPEGADNYMIVPFDEIKATVAFLESLDYEVIASWPIEEAA*
Ga0163110_1152533213300012928Surface SeawaterMLHHIYYINANGADNYMIVPFDEIDLTVAFLESLDHEVVAYWPIEEEA*
Ga0163179_1060598923300012953SeawaterMLHHIYYINTAGADNYMIVPFDDIKGTVTFLESLDYEVVAYWPIQEEA*
Ga0163179_1069482323300012953SeawaterMLHRIYYTNLAGADNYMIVPFDEIKGTVAFLESLDYEVVAYWPIEAEA*
Ga0180120_1002179853300017697Freshwater To Marine Saline GradientMLHHIYYINPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEEEA
Ga0181372_107987213300017705MarineYTNPAGADNYMIVPFDEIKGTVTFLESLDYDVVAYWPIEAEE
Ga0181372_109460823300017705MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYDVVAYWPIEAEG
Ga0181377_101033133300017706MarineMLHHIYYINKYGADNYMIVPHDEITGTTEYLESLDYEVIAIWPIQEEA
Ga0181387_100512573300017709SeawaterMLHHIYYINPAGADNYMIVPFDEISGTVVFLESLDYEVVAYWPIQEEA
Ga0181387_104192933300017709SeawaterMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEE
Ga0181387_108241423300017709SeawaterMLHHIYYINQYGADNYMIVPFDEIKGTVKFLESLDYEVIAYWLIEEAA
Ga0181387_109219713300017709SeawaterYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEA
Ga0181383_100843843300017720SeawaterMLHHIYYINPAGADNYMIVPFDEIEGTVAFLESLDYEVVAYWPIQEEA
Ga0181383_100848143300017720SeawaterMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEA
Ga0181383_103034353300017720SeawaterMLHRIYYTNPAGADNYMIVPFDDIKGTVTFLESLDYEVVAYWPIEAEE
Ga0181383_104922123300017720SeawaterMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYDVVAYWPIEAEE
Ga0181415_114215923300017732SeawaterMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVIAIWPIQEEA
Ga0181431_108464813300017735SeawaterMLHHIYYINPAGADNYMIVPFDEISGTVAFLESLDYEVVAYWPIQEEA
Ga0181428_108314723300017738SeawaterMLHRIYYTNPSGADNYMIVPFDEIKGTVKFLESLDYEVIAYWLIEEAA
Ga0181427_110341533300017745SeawaterYCIQPKENNMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEG
Ga0181389_105879733300017746SeawaterMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPVEAEG
Ga0181420_109382533300017757SeawaterMLHHIHYINPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAE
Ga0181420_117853413300017757SeawaterYYINQYGADNYMIVPFDEIKGTVKFLESLDYEVIAYWLIEEAA
Ga0181408_119409423300017760SeawaterMLHRIYYTNPAGADNYMIVPFDEIKGTVAFLESLDYEVVSYGPIEAEG
Ga0181385_104921213300017764SeawaterMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEGEE
Ga0181406_125119423300017767SeawaterMLHHIYYINKYGADNYMIVPHDEIAGTTEYLNSLDYEVIAIWPIQEEA
Ga0187220_101234033300017768SeawaterMLHHIYYINPAGADNYMIVPFDEISGTVAFLESLDYEVVAYRPIQEEA
Ga0187220_117687023300017768SeawaterMLHHIYYINKYGADNYMIVPHDEIAGTTDYLNSLDYEVIAIWPIQEEA
Ga0181394_127471113300017776SeawaterMLHRIYYTNSEGADNYMIVPFDEIKGTVTFLESLDY
Ga0181584_1003212793300017949Salt MarshMLHHIYYINANGADNYMIVPFDEIDLTVAFLESLDHKVVAYWPIEVA
Ga0181577_1064505223300017951Salt MarshMLHHIYYINANGADNYMIVPFDEIDLTVAFLESLDHKVVAYWPIEEEA
Ga0181580_1031810933300017956Salt MarshMLHHIYYINTNGADNYMIVPFEEIDITVAFLESLDHKVIAYWPIEEVA
Ga0181580_1065200613300017956Salt MarshMLHHIYYINANGADNYMIVPFDEIDITVAFLESLDHKVVAYWPIEEEA
Ga0181580_1071687223300017956Salt MarshMLHHIYYINAEGADEKMIVPFDEIKGTVAFLESLDYEVVAYWPIE
Ga0181581_10021242103300017962Salt MarshMLHHIYYINANGADNYMIVPFDEIDLTVAFLESLDQKVVAYWPIEVA
Ga0181581_1035741413300017962Salt MarshKTSSIIIMYSTKGANMLHHIYYINTNGADNYMIVPFEEIDITVAFLESLDHKVIAYWPIEEVA
Ga0181590_1046675823300017967Salt MarshMLHHIYYINANGADNYMIVPFDEIDLTVAFLESLDHEVVAYWPIEEEA
Ga0181590_1055294343300017967Salt MarshYINANGADNYMIVPFDEIDLTVAFLESLDHKVVAYWPIEEEA
Ga0181587_1075936913300017968Salt MarshGANMLHHIYYINTNGADNYMIVPFEEIDITVAFLESLDHKVIAYWPIEEVA
Ga0181585_1079649713300017969Salt MarshHIYYINANGADNYMIVPFDEIDLTVAFLESLDHEVVAYWPIEEEA
Ga0181579_1060887613300018039Salt MarshMLHHIYYINTNGADNYMIVPFDEIDITVAFLESLDHKVVAYWPIEEEA
Ga0181568_1052073323300018428Salt MarshMLHHIYYINANGADNYMIVPFDEIDLTVAFLESLDHKVIAYWPIE
Ga0194029_105728113300019751FreshwaterMLHHIYYINPEGADNYMIVPFDEIKGTVAFLESLDYEVVAYWPIEEEA
Ga0206125_1006296233300020165SeawaterMLHHIYYINKYGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEEEA
Ga0211527_1022664613300020378MarineMLHHIYYINPEGADNYMIVPFDEIDLTVAFLESLDYEVVAYWQIEEEA
Ga0211636_1002506363300020400MarineMLHHIYYINPEGADYYMIVPFDEIKGTVAFLESLDYEVVAYWPIEEVA
Ga0211532_1018532213300020403MarineMLHHIYYINAEGADNYMIVPFDEIDLTVAFLESLDHKVIAYWPIEEEA
Ga0211472_1046812513300020409MarineVIIIMYSTKGANMLHHIYYINASGADNYMIVPFDEIDLTVAFLESLDHEVVAYWPIEEA
Ga0211523_1012502533300020414MarineMLHHIYYINPEGADDYMIVPFDEIEGTVAFLESLDHEVVAYWPIEEEA
Ga0211521_1007193733300020428MarineMLHHIYYINPAGADNYMIVPFDEIKGTVAFLESLDYEVVAYWPIQEEA
Ga0211521_1011181743300020428MarineMLHQIYYANKYGADYYMIVPHNEISGTVENLKSLDYEIIAVWQIEEK
Ga0211576_1054153913300020438MarineMLHHIYYINQYGADNYMIVHFDEIEGTVKFLESLDYEVIAYWLIEEAA
Ga0211518_1007454733300020440MarineMLHHIYYTNPAGADNYMIVPFDEIKGTVAFLESLDYEVVAYWPIQEEA
Ga0211518_1014502533300020440MarineMLHHIYYINPEGADNYMIVPFDEIKGTVAFLESLDHEVVAYWPIE
Ga0211638_1062429613300020448MarineMLHHIYYINPAGEDNYMIVPFDEIKGTVAFLESLDHEVVAYWQIEESTAC
Ga0211625_1005156463300020473MarineMLHHIYYINPAGADNYMIVPFDEIKGTVAFLESLNHEVIAYWPIEEEA
Ga0211547_1060244523300020474MarineMLHHIYYINPVGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEA
Ga0212022_106026913300022164AqueousMLHHIYYINKYGADNYMIVPFDEIKGTVTFLESLDYDVVAYWPIEEEA
Ga0196905_104440523300022198AqueousMLHHIYYINPEGADNYMIVPFDEIKATVAFLESLDYEVIASWPIEEAA
Ga0196901_101293063300022200AqueousMLHHIYYINPEGADNYMIVPFDEIKATVAFLESLDYEVIAYWPIEEAA
(restricted) Ga0233433_1011669523300022931SeawaterMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVSYWPIEAEG
Ga0255751_1052234713300023116Salt MarshIIIMYSTKGANMLHHIYYINAEGADEKMIVPFDEIKGTVAFLESLDYEVVAYWPIE
Ga0255757_1003923513300023117Salt MarshSTKGANMLHHIYYINANGADNYMIVPFDEIDLTVAFLESLDHKVVAYWPIEVA
Ga0208920_100481053300025072MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVAFLESLDYEVVAYWPIEAEA
Ga0209348_108495633300025127MarineMLHHIYYINANGADNYMIVPFDEIKLTVEFLESLDHKVIAYWPIEEEA
Ga0209348_109391533300025127MarineMLHHIYYINANGADNYMIVPFDEIDLTVAFLESLDHEVVAYWPIE
Ga0209348_116709423300025127MarineMLHHIYYINPEGADDYMIVPFDEIEGTVAFLESLDHEVVAYWPIEAEA
Ga0209348_120540813300025127MarineMLHHIYYINPEGADDYMIVPFDEIKGTVAFLESLDHEVVAYWPIEEEA
Ga0209232_104717623300025132MarineMLHHIYYINPAGADNYMIVPFDEIKGTVAFLESLNHEVVAYWPIEAELA
Ga0209756_105879553300025141MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVAFLESLDYEVVSYWPIEAEG
Ga0209756_112302143300025141MarineLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEA
Ga0209756_115248713300025141MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEV
Ga0209645_102283223300025151MarineMLHHIYYINAEGADNYMIVPFDEIDLTVAFLESLDHEVVAYWPIEEEA
Ga0209630_1031453633300025892Pelagic MarineMLHHIYYINPAGADNYMIVPFDEIKGTVAFLESLDYDVVAYWPIEEEA
Ga0208407_122709723300026257MarineMLHRIYYTNPAGADNYMIVPFDEIKGTVTFLESLDYEVVAYWPIEAEG
Ga0183748_107570623300029319MarineMLHHIYYINAEGADNYMIVPFDEIKGTVAFLESLNHEVIAYWPIEEEA
Ga0183748_112396733300029319MarineMLHHIYYINPEGADYYMIVPFDEIKGTVAFLESLDHEVVAYWP


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