NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105096

Metagenome / Metatranscriptome Family F105096

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105096
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 54 residues
Representative Sequence MAITRLLLEAASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Number of Associated Samples 69
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 49.00 %
% of genes from short scaffolds (< 2000 bps) 73.00 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (84.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(58.000 % of family members)
Environment Ontology (ENVO) Unclassified
(58.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(95.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 71.70%    β-sheet: 0.00%    Coil/Unstructured: 28.30%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02675AdoMet_dc 44.00
PF04371PAD_porph 26.00
PF01370Epimerase 11.00
PF01434Peptidase_M41 5.00
PF16363GDP_Man_Dehyd 4.00
PF08212Lipocalin_2 2.00
PF13578Methyltransf_24 1.00
PF03567Sulfotransfer_2 1.00
PF04724Glyco_transf_17 1.00
PF07885Ion_trans_2 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1586S-adenosylmethionine decarboxylaseAmino acid transport and metabolism [E] 44.00
COG2957Agmatine/peptidylarginine deiminaseAmino acid transport and metabolism [E] 26.00
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 5.00
COG3040Bacterial lipocalin BlcCell wall/membrane/envelope biogenesis [M] 2.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A84.00 %
All OrganismsrootAll Organisms16.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003617|JGI26082J51739_10090180All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300003617|JGI26082J51739_10119873Not Available637Open in IMG/M
3300006026|Ga0075478_10038884All Organisms → Viruses → Predicted Viral1574Open in IMG/M
3300006637|Ga0075461_10003214Not Available5357Open in IMG/M
3300006637|Ga0075461_10017605All Organisms → cellular organisms → Bacteria2357Open in IMG/M
3300006637|Ga0075461_10064941All Organisms → Viruses → Predicted Viral1172Open in IMG/M
3300006802|Ga0070749_10031796All Organisms → Viruses3287Open in IMG/M
3300006802|Ga0070749_10106161Not Available1657Open in IMG/M
3300006810|Ga0070754_10250966All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300006810|Ga0070754_10378516Not Available622Open in IMG/M
3300006867|Ga0075476_10241571Not Available646Open in IMG/M
3300006869|Ga0075477_10215423All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300006869|Ga0075477_10294809Not Available646Open in IMG/M
3300006874|Ga0075475_10360408Not Available590Open in IMG/M
3300008012|Ga0075480_10026417Not Available3536Open in IMG/M
3300008012|Ga0075480_10090051Not Available1733Open in IMG/M
3300008012|Ga0075480_10378403Not Available702Open in IMG/M
3300008012|Ga0075480_10482089Not Available599Open in IMG/M
3300009000|Ga0102960_1036623All Organisms → Viruses → Predicted Viral1819Open in IMG/M
3300009001|Ga0102963_1071677Not Available1421Open in IMG/M
3300009124|Ga0118687_10165293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360795Open in IMG/M
3300016734|Ga0182092_1158148Not Available571Open in IMG/M
3300016741|Ga0182079_1525371Not Available611Open in IMG/M
3300016747|Ga0182078_10177795Not Available790Open in IMG/M
3300016747|Ga0182078_10246711Not Available1495Open in IMG/M
3300016766|Ga0182091_1271215Not Available699Open in IMG/M
3300016787|Ga0182080_1007734Not Available573Open in IMG/M
3300016791|Ga0182095_1422975Not Available8674Open in IMG/M
3300016791|Ga0182095_1619428Not Available550Open in IMG/M
3300017818|Ga0181565_10022832Not Available4634Open in IMG/M
3300017818|Ga0181565_10372614Not Available946Open in IMG/M
3300017818|Ga0181565_10881951Not Available559Open in IMG/M
3300017824|Ga0181552_10003677Not Available10904Open in IMG/M
3300017949|Ga0181584_10179616All Organisms → Viruses → Predicted Viral1403Open in IMG/M
3300017950|Ga0181607_10060683Not Available2516Open in IMG/M
3300017950|Ga0181607_10154654Not Available1388Open in IMG/M
3300017950|Ga0181607_10342325Not Available829Open in IMG/M
3300017951|Ga0181577_10416543Not Available852Open in IMG/M
3300017957|Ga0181571_10360921Not Available906Open in IMG/M
3300017958|Ga0181582_10617891Not Available661Open in IMG/M
3300017964|Ga0181589_10318763Not Available1043Open in IMG/M
3300017967|Ga0181590_10973429Not Available554Open in IMG/M
3300017969|Ga0181585_10024250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4930Open in IMG/M
3300017985|Ga0181576_10128583Not Available1691Open in IMG/M
3300017985|Ga0181576_10626630Not Available649Open in IMG/M
3300017986|Ga0181569_10386434Not Available959Open in IMG/M
3300017986|Ga0181569_10766908Not Available634Open in IMG/M
3300018041|Ga0181601_10162682Not Available1350Open in IMG/M
3300018413|Ga0181560_10572132Not Available511Open in IMG/M
3300018416|Ga0181553_10120310Not Available1596Open in IMG/M
3300018416|Ga0181553_10299382Not Available896Open in IMG/M
3300018417|Ga0181558_10353314Not Available789Open in IMG/M
3300018418|Ga0181567_10399281Not Available911Open in IMG/M
3300018424|Ga0181591_10871236Not Available620Open in IMG/M
3300018424|Ga0181591_11002767Not Available567Open in IMG/M
3300018428|Ga0181568_10690552Not Available798Open in IMG/M
3300018428|Ga0181568_11337702Not Available534Open in IMG/M
3300018876|Ga0181564_10562756Not Available607Open in IMG/M
3300019274|Ga0182073_1257954Not Available549Open in IMG/M
3300019459|Ga0181562_10003863Not Available10905Open in IMG/M
3300019459|Ga0181562_10064028All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → unclassified Rhodopirellula → Rhodopirellula sp.2194Open in IMG/M
3300019459|Ga0181562_10413095Not Available650Open in IMG/M
3300019756|Ga0194023_1089787Not Available619Open in IMG/M
3300020051|Ga0181555_1087860Not Available1413Open in IMG/M
3300020052|Ga0181554_1250921Not Available690Open in IMG/M
3300020056|Ga0181574_10084227Not Available2184Open in IMG/M
3300020173|Ga0181602_10287180Not Available686Open in IMG/M
3300020177|Ga0181596_10056074Not Available2265Open in IMG/M
3300020178|Ga0181599_1018958Not Available4111Open in IMG/M
3300020189|Ga0181578_10019142Not Available5058Open in IMG/M
3300021379|Ga0213864_10258389Not Available885Open in IMG/M
3300021957|Ga0222717_10196432Not Available1200Open in IMG/M
3300021958|Ga0222718_10006143Not Available9604Open in IMG/M
3300021958|Ga0222718_10157412Not Available1276Open in IMG/M
3300021959|Ga0222716_10012092All Organisms → Viruses6523Open in IMG/M
3300021959|Ga0222716_10039329Not Available3406Open in IMG/M
3300021960|Ga0222715_10033924Not Available3650Open in IMG/M
3300021960|Ga0222715_10061857All Organisms → cellular organisms → Bacteria2535Open in IMG/M
3300021960|Ga0222715_10258950Not Available1008Open in IMG/M
3300021960|Ga0222715_10454669Not Available688Open in IMG/M
3300021961|Ga0222714_10029060All Organisms → Viruses4151Open in IMG/M
3300021961|Ga0222714_10259444Not Available970Open in IMG/M
3300021964|Ga0222719_10014756All Organisms → Viruses6359Open in IMG/M
3300022900|Ga0255771_1010295Not Available7110Open in IMG/M
3300022900|Ga0255771_1213001Not Available707Open in IMG/M
3300022907|Ga0255775_1003998Not Available11841Open in IMG/M
3300022907|Ga0255775_1122345Not Available1100Open in IMG/M
3300022922|Ga0255779_1335018Not Available564Open in IMG/M
3300022926|Ga0255753_1344850Not Available558Open in IMG/M
3300022929|Ga0255752_10124128Not Available1342Open in IMG/M
3300023117|Ga0255757_10376666Not Available661Open in IMG/M
3300023175|Ga0255777_10592711Not Available552Open in IMG/M
3300023176|Ga0255772_10475101Not Available609Open in IMG/M
3300025630|Ga0208004_1011134Not Available3011Open in IMG/M
3300025695|Ga0209653_1174507Not Available610Open in IMG/M
3300025818|Ga0208542_1011549Not Available3078Open in IMG/M
3300025818|Ga0208542_1017921Not Available2404Open in IMG/M
3300025828|Ga0208547_1042072Not Available1639Open in IMG/M
3300025840|Ga0208917_1088015Not Available1155Open in IMG/M
3300034375|Ga0348336_127093Not Available803Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh58.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous22.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water12.00%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine3.00%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.00%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003617Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300016734Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041410CS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016741Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071410CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016747Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016766Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016787Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071411AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016791Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018418Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018876Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019274Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300020051Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020052Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020056Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020177Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020189Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022900Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaGEnvironmentalOpen in IMG/M
3300022907Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaGEnvironmentalOpen in IMG/M
3300022922Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaGEnvironmentalOpen in IMG/M
3300022926Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaGEnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300023117Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025695Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI26082J51739_1009018023300003617MarineMAITRLLLEAASANSTENMTMAPDDYEIDYASGAVMLKAVGSFMLIFFTLFMK*
JGI26082J51739_1011987313300003617MarineMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK*
Ga0075478_1003888423300006026AqueousMAITRLLLEAASANATENVTMAPDDYEIDYASGAVMLKAVGSFMLVFFALFMK*
Ga0075461_1000321463300006637AqueousMAITRLLLEAVTENFTGNTTMPPSDYEIPYAEDDDSGAVMLKAVGSFMLIFLSFFLK*
Ga0075461_1001760543300006637AqueousMAITRLLLEAVTENFTGNATMPPSDYEIPYAEEEETSGVAILKAVGSVMLIFFALFMN*
Ga0075461_1006494123300006637AqueousMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVF
Ga0070749_1003179623300006802AqueousMAITRLLLEAATENFMGNATMPPSDYEIPYAEDDDSGAVMLKAVGSFMLIFLSFFLR*
Ga0070749_1010616123300006802AqueousMAITRLLLEAASANSTGNVTMAPDDYEIDYASGAVMLKAVGSFMLIFLSFFLR*
Ga0070754_1025096623300006810AqueousMAITRLLLEAASANATENATMVSDDDYEIVYASGAVMLKAVGSFMLIFLSFFLR*
Ga0070754_1037851623300006810AqueousLTYSNMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK*
Ga0075476_1024157113300006867AqueousIKHFLLTYSNMAITRLLLEAASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR*
Ga0075477_1021542323300006869AqueousMAITRLLLEAATANATENATMVSDDYEIVYASGAVMLKAVGSFMIVFLSFFLK*
Ga0075477_1029480913300006869AqueousMAITRLLLEAASANSTENVTMAPDDYEIDYASGAVMLKAVGSFMLI
Ga0075475_1036040823300006874AqueousTYSNMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK*
Ga0075480_1002641753300008012AqueousMAITRLLLEAASANATENMTMVSDEDYEIVYASGAVMLKAVGSFMLIFLSFFLK*
Ga0075480_1009005123300008012AqueousMAITRLLLEAASANSTENMTMAPDDYEIDYASGAVMFKAVGSFMLIFLSFFLR*
Ga0075480_1037840313300008012AqueousKEILLTYSNMAITRLLLEAASANSTENMTMAPDDYEIDYASGAVMFKAVGSFMLIFLSFFLR*
Ga0075480_1048208913300008012AqueousMAITRLLLEAASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR*
Ga0102960_103662333300009000Pond WaterMAITRLLLEAATANFTGNATMPPSDYEIPYAEDDDSGAVMLKTVGSFMLIFLSFFLK*
Ga0102963_107167743300009001Pond WaterLNYSNMAITRLLLETASANATENATMVSDDYEIVYASGAVMLKAVGSFMIVFLSFFLK*
Ga0118687_1016529313300009124SedimentIKHFLLNYSNMAITRLLLEAASANSTENMTMAPDDYEIDYASGAVMLKAVGSFMLIFFTLFMK*
Ga0182092_115814813300016734Salt MarshTRLLLEAASENLTMDNETIPYAEDDTSGAVMLKAVGSFMLIFLSFFLR
Ga0182079_152537123300016741Salt MarshTRLLLEAASENFTGNATMPPSDYEIPYVDDDDSGAVMLKAVGSFMLIFLSFFLR
Ga0182078_1017779513300016747Salt MarshMAITRLLLEAASSNFTGNATMPPSDYEIPYVDDDDSGAVMLKAVGSFMLIFLSFFL
Ga0182078_1024671133300016747Salt MarshMAITRLLLEAATENFTGNATMPPSDYEIPYAEDDASGAVMLKAVGSFMLIFLSFFLR
Ga0182091_127121513300016766Salt MarshLEAASANSTENMTMAPDDYEIDYASGAVMFKAVGSFMLIFLSFFLR
Ga0182080_100773413300016787Salt MarshRLLLEAATENFTGNATMPPSDYEIPYAEDDTSGAVMLKAVGSFMLIFLSFFLR
Ga0182095_142297593300016791Salt MarshMAITRLLLEAASANSTENMTMAPDDYEIDYASGAVMFKAVGSFILIFLSFFLR
Ga0182095_161942813300016791Salt MarshAITRLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0181565_1002283223300017818Salt MarshMAITRLLLEAASANATENMTMVSDDDYEINYASGAVMLKAVGSFMLIFLSFFLR
Ga0181565_1037261423300017818Salt MarshMAITRLLLDTASANFTENATMAPDDYEINYASGTVMLKAVGSFMIIFLSFFLR
Ga0181565_1088195123300017818Salt MarshMAITRLLLEAASANATENVTMAPDDYEIDYASGAVMLKAVGSFMLVFFALFMK
Ga0181552_1000367773300017824Salt MarshMAITRLLLEAASANSTENMTMAPDDYEIDYASGAVMFKAVGSFMLIFLSFFLR
Ga0181584_1017961623300017949Salt MarshMAITRLLLEAASENFTGNATMPPSDYEIPYVDDDDSGAVMLKAVGSFMLIFLSFFLR
Ga0181607_1006068333300017950Salt MarshMAITRLLLEAASENLTMDNETIPYAEDDTSGAVMLKAVGSFMLIFLSFFLR
Ga0181607_1015465433300017950Salt MarshMAITRLLLEAATANATENATMVSDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181607_1034232523300017950Salt MarshMAITRLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0181577_1041654323300017951Salt MarshMAITRLLLEAATANFTGNATMPPSDYEIPYAEDDDSGAVMLKTVGSFMLIFLSFFLK
Ga0181571_1036092123300017957Salt MarshMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181582_1061789113300017958Salt MarshLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181589_1031876313300017964Salt MarshQPIKHFLLTYSNMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181590_1097342913300017967Salt MarshMAITRLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIV
Ga0181585_1002425013300017969Salt MarshMAITRLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181576_1012858313300017985Salt MarshMAITRLLLEAASENFTGNATMPPSDYEIPYVDDDDSGAMMLKAVGSFMLIFLSFFL
Ga0181576_1062663023300017985Salt MarshIKHFLLNYSNMAITRLLLEAASSNFTGNATMPPSDYEIPYVDDDDSGAVMLKAVGSFMLIFLSFFLR
Ga0181569_1038643413300017986Salt MarshIKHFLLNYSNMAITRLLLEAASANATENVTMAPDDYEIDYASGAVMLKAVGSFMLVFFALFMK
Ga0181569_1076690813300017986Salt MarshSNMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181601_1016268233300018041Salt MarshLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0181560_1057213223300018413Salt MarshTRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181553_1012031023300018416Salt MarshMAITRLLLEAATASATENATMVSDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181553_1029938223300018416Salt MarshMAITRLLLETASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0181558_1035331413300018417Salt MarshMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSF
Ga0181567_1039928113300018418Salt MarshMAITRLLLEAASANATENVTMAPDDYEIDYASGAVMLKAVGSFML
Ga0181591_1087123623300018424Salt MarshLTYSNMAITRLLLEAASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0181591_1100276713300018424Salt MarshMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFM
Ga0181568_1069055223300018428Salt MarshMAITRLLLEAASSNFTGNATMPPSDYVIPYVDDDDSGAVMLKAVGSFMLIFLSFFLR
Ga0181568_1133770213300018428Salt MarshMAITRLLLEAASANATENVTMVSDDDYEIDYASGAVMLKAVGSFMLIFLSFFLK
Ga0181564_1056275613300018876Salt MarshMAITRLLLETASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSF
Ga0182073_125795413300019274Salt MarshRLLLEAASENFTGNATMPPSDYEIPYVDDDDSGAVMLKAVGSFMLIFLSFFLR
Ga0181562_1000386373300019459Salt MarshMAITRLLLKAASANSTENMTMAPDDYEIDYASGAVMFKAVGSFMLIFLSFFLR
Ga0181562_1006402843300019459Salt MarshNMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181562_1041309513300019459Salt MarshNNMAITRLLLEAASANATENMTMVSDDDYEINYASGAVMLKAVGSFMLIFLSFFLR
Ga0194023_108978713300019756FreshwaterMAITRLLLEAASENFTGNATMPPSDYEIPYAEGDASGAVMLKAVGSFMIVFLSFFLK
Ga0181555_108786033300020051Salt MarshSNMAITRLLLEAASANSTENMTMAPDDYEIDYASGAVMFKAVGSFMLIFLSFFLR
Ga0181554_125092113300020052Salt MarshHFLLNYSNMAITRLLLEAASANATENVTMAPDDYEIDYASGAVMLKAVGSFMLVFFALFM
Ga0181574_1008422753300020056Salt MarshIKHFLLTYSNMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0181602_1028718013300020173Salt MarshITRLLLEAASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0181596_1005607443300020177Salt MarshLLEAASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0181599_101895863300020178Salt MarshMAITRLLLEAASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFL
Ga0181578_1001914223300020189Salt MarshMAITRLLLEAATENFTGNATMPPSDYEIPYAEDDTSGAVMLKAVGSFMLIFLSFFLR
Ga0213864_1025838923300021379SeawaterMAITRLLLEAASANATENMTMVSDEDYEIVYASGAVMLKAVGSFMLIFLSFFLK
Ga0222717_1019643223300021957Estuarine WaterMAITRLLLEAATANFTGNATMPPDDYEIPFAGDDDSEAVMFKAVGSFMLVFFALFMK
Ga0222718_10006143103300021958Estuarine WaterMAITRLLLEAATANFTGNATMPPDDYEIPFAGDDDSEAVMFKAVGSFMLIFLSFFLK
Ga0222718_1015741223300021958Estuarine WaterMAITRLLLEAASANSTENMTMAPDDYEIDYASGAVMLKAVGSFMLIFFTLFMK
Ga0222716_1001209213300021959Estuarine WaterMAITRLLLEAASENFMGNATMPPSDYEIPYAEDDNSGAVMLKAVGSFMLIFLSFFLR
Ga0222716_1003932923300021959Estuarine WaterMAITRLLLEAASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0222715_1003392423300021960Estuarine WaterMAITRLLLEAVTENFTGNVTMPPSDYEIPYAEEEETSGVAILKAVGSVMLVFFALFMN
Ga0222715_1006185733300021960Estuarine WaterMAITRLLLEAASENFTGNATMPPSDYEIPYAEDDNSGAVMLKAVGSFMLIFLSFFLR
Ga0222715_1025895013300021960Estuarine WaterMAITRLLLEAASENFTGNATMPPSDYEIPYAEDDDSGAVMLKTVGSFMLIFLSFFLK
Ga0222715_1045466933300021960Estuarine WaterLETASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0222714_1002906093300021961Estuarine WaterMAITRLLLEAATDNFTGNATLSPSDYEIPYVDDDSGAVMLKAVGSFMLIFLSFFLR
Ga0222714_1025944413300021961Estuarine WaterMAITRLLLEAATENFTGNATMPPSDYEIPYAEDDNSGAVMLKAVGSFMLIFLSFFLR
Ga0222719_1001475613300021964Estuarine WaterFLLNYSNMAITRLLLETASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0255771_101029523300022900Salt MarshMAITRLLLEAASANATENMTMVSDDDYEINYASGAVMLKAVGSFMLIFLSFLLK
Ga0255771_121300123300022900Salt MarshMAITRLLLEAASSNFTGNATMPPSDYEIPYVDDDDSGAVMLKAVGSFMLIFLSFFLR
Ga0255775_100399883300022907Salt MarshMAITRLLLEAASENFTGNATMPPSDYEIPYAEDDASGAVMLKAVGSFMLIFLSFFLK
Ga0255775_112234533300022907Salt MarshLLTYSNMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0255779_133501813300022922Salt MarshMAITRLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMLIFLS
Ga0255753_134485013300022926Salt MarshNMAITRLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0255752_1012412813300022929Salt MarshHFLLTYSNMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0255757_1037666633300023117Salt MarshTYSNMAITRLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0255777_1059271123300023175Salt MarshLNYSNMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMIVFLSFFLK
Ga0255772_1047510123300023176Salt MarshMAITRLLLEAASSNFTGNATMPPSDYEIPYVDDDDSGAVMLKAVGS
Ga0208004_101113433300025630AqueousMAITRLLLEAVTENFTGNTTMPPSDYEIPYAEDDDSGAVMLKAVGSFMLIFLSFFLK
Ga0209653_117450713300025695MarineNMAITRLLLEAASANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0208542_101154933300025818AqueousMAITRLLLEAASANSTGNVTMAPDDYEIDYASGAVMLKAVGSFMLIFLSFFLR
Ga0208542_101792153300025818AqueousMAITRLLLEAATENFMGNATMPPSDYEIPYAEDDDSGAVMLKAVGSFMLIFLSFFLR
Ga0208547_104207223300025828AqueousMAITRLLLEAATANATENATMVSDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0208917_108801533300025840AqueousTRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMLIFLSFFLR
Ga0348336_127093_282_4463300034375AqueousMAITRLLLEAASANATENMTMVSDDDYEIVYASGAVMLKAVGSFMLIFLSFFLR


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