 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105047 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 85 residues |
| Representative Sequence | MRSINFDKVIVEWMDINSCDDAWNTEDHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| Number of Associated Samples | 57 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 61.00 % |
| % of genes near scaffold ends (potentially truncated) | 34.00 % |
| % of genes from short scaffolds (< 2000 bps) | 71.00 % |
| Associated GOLD sequencing projects | 55 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (85.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (20.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (53.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (55.000 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 9.30% β-sheet: 46.51% Coil/Unstructured: 44.19% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF13730 | HTH_36 | 7.00 |
| PF00145 | DNA_methylase | 4.00 |
| PF08299 | Bac_DnaA_C | 3.00 |
| PF00959 | Phage_lysozyme | 2.00 |
| PF01555 | N6_N4_Mtase | 1.00 |
| PF12236 | Head-tail_con | 1.00 |
| PF13759 | 2OG-FeII_Oxy_5 | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG0270 | DNA-cytosine methylase | Replication, recombination and repair [L] | 4.00 |
| COG0593 | Chromosomal replication initiation ATPase DnaA | Replication, recombination and repair [L] | 3.00 |
| COG0863 | DNA modification methylase | Replication, recombination and repair [L] | 1.00 |
| COG1041 | tRNA G10 N-methylase Trm11 | Translation, ribosomal structure and biogenesis [J] | 1.00 |
| COG2189 | Adenine specific DNA methylase Mod | Replication, recombination and repair [L] | 1.00 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 85.00 % |
| All Organisms | root | All Organisms | 15.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Freshwater, Plankton | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton | 20.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 16.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 10.00% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 8.00% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 7.00% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 6.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 5.00% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 5.00% |
| Deep Subsurface Sediment | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment | 4.00% |
| Freshwater Lentic | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic | 3.00% |
| Deep Subsurface | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface | 3.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater | 2.00% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 2.00% |
| Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake | 2.00% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 2.00% |
| Fracking Water | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water | 2.00% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 1.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater | 1.00% |
| Watersheds | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Watersheds | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001275 | Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion | Environmental | Open in IMG/M |
| 3300002408 | Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123) | Environmental | Open in IMG/M |
| 3300004796 | Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300004797 | Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300005527 | Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG | Environmental | Open in IMG/M |
| 3300005581 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF | Environmental | Open in IMG/M |
| 3300005583 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF | Environmental | Open in IMG/M |
| 3300005662 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4) | Environmental | Open in IMG/M |
| 3300005805 | Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA | Environmental | Open in IMG/M |
| 3300006639 | Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11 | Environmental | Open in IMG/M |
| 3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
| 3300006805 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA | Environmental | Open in IMG/M |
| 3300007734 | Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Jan | Environmental | Open in IMG/M |
| 3300007735 | Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea ? 2014Oct | Environmental | Open in IMG/M |
| 3300008107 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA | Environmental | Open in IMG/M |
| 3300008114 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA | Environmental | Open in IMG/M |
| 3300008116 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA | Environmental | Open in IMG/M |
| 3300008117 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA | Environmental | Open in IMG/M |
| 3300008259 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA | Environmental | Open in IMG/M |
| 3300008263 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR | Environmental | Open in IMG/M |
| 3300008266 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA | Environmental | Open in IMG/M |
| 3300008448 | Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs | Environmental | Open in IMG/M |
| 3300008450 | Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs | Environmental | Open in IMG/M |
| 3300009168 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
| 3300010354 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA | Environmental | Open in IMG/M |
| 3300010370 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA | Environmental | Open in IMG/M |
| 3300013004 | Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG | Environmental | Open in IMG/M |
| 3300013005 | Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG | Environmental | Open in IMG/M |
| 3300017747 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N | Environmental | Open in IMG/M |
| 3300018405 | Freshwater microbial communities from Pennsylvania, USA, analyzing microbe dynamics in response to fracking - TARM_MetaG_T2_14 | Environmental | Open in IMG/M |
| 3300019784 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D | Environmental | Open in IMG/M |
| 3300020151 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1 | Environmental | Open in IMG/M |
| 3300020159 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1 | Environmental | Open in IMG/M |
| 3300020205 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1 | Environmental | Open in IMG/M |
| 3300020572 | Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes) | Environmental | Open in IMG/M |
| 3300021962 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D | Environmental | Open in IMG/M |
| 3300021963 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D | Environmental | Open in IMG/M |
| 3300022179 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N | Environmental | Open in IMG/M |
| 3300023174 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505 | Environmental | Open in IMG/M |
| 3300027114 | Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes) | Environmental | Open in IMG/M |
| 3300027499 | Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11 (SPAdes) | Environmental | Open in IMG/M |
| 3300027659 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes) | Environmental | Open in IMG/M |
| 3300027760 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027804 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes) | Environmental | Open in IMG/M |
| 3300028025 | Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC | Environmental | Open in IMG/M |
| 3300031758 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123 | Environmental | Open in IMG/M |
| 3300031857 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125 | Environmental | Open in IMG/M |
| 3300031951 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120 | Environmental | Open in IMG/M |
| 3300031963 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116 | Environmental | Open in IMG/M |
| 3300032050 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122 | Environmental | Open in IMG/M |
| 3300032116 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119 | Environmental | Open in IMG/M |
| 3300034061 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028 | Environmental | Open in IMG/M |
| 3300034062 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045 | Environmental | Open in IMG/M |
| 3300034073 | Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL | Environmental | Open in IMG/M |
| 3300034095 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091 | Environmental | Open in IMG/M |
| 3300034104 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120 | Environmental | Open in IMG/M |
| 3300034106 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| B570J13894_10207411 | 3300001275 | Freshwater | MRHGMKSINFDKVIISWLDINSCDNAWNTEEDLKDLVPAMCTTIGYLYEENKDWVKTFATYSFNTDSLDVGDCV |
| B570J29032_1097265241 | 3300002408 | Freshwater | SGMKPINFDKVIISWLDINSCDNAWNTEEDLKDLIPATCTTIGYLYEENKDWVKTFATYSFNLDSTLDVGDAVVIPRGVILSIKKLEN* |
| Ga0007763_115681071 | 3300004796 | Freshwater Lake | MRSINFDKVIVEWMDINSCDDAWNTEDELKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGC |
| Ga0007764_108952982 | 3300004797 | Freshwater Lake | INYDKVIVEWQDINSCDDAWSSSDQLKELMPAMCTTIGYLYEDTPTYIKTFATFSFNQDDTIDMGDCIVIPKGCVVSIKKIEN* |
| Ga0068876_1000946214 | 3300005527 | Freshwater Lake | MRSINFDKVIVEWMDINSCDDAWNTEDQLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0049081_100964152 | 3300005581 | Freshwater Lentic | MRHINFDKVIISWLDINSCDNAWNTEEDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGVIISIKKLEN* |
| Ga0049085_101588711 | 3300005583 | Freshwater Lentic | LDINSCDNAWNTEEDLKDLVPAMCTTIGYLYEDNKDWVKTFATYSFNSDSLDVGDCVVIPRGVILSIKKLEN* |
| Ga0078894_101750513 | 3300005662 | Freshwater Lake | MRSINFDKVIVEWMDINSCDDAWNTEDELKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0079957_101461418 | 3300005805 | Lake | MKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKIEN* |
| Ga0079957_10424181 | 3300005805 | Lake | QTLLQTIFMRHGMRHINYDKVIVEWLDISSDGCDEAWNTEDELKNLVPALCTTIGYLYEDNKDWIKTFATYSFNSDQTLDFGDCVCIPKGVVRSIRKLEN* |
| Ga0079301_10558873 | 3300006639 | Deep Subsurface | MIFMRHGMKPINFDKVIVEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0070749_107918173 | 3300006802 | Aqueous | MRHINYDKVIVEWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKI |
| Ga0075464_107149542 | 3300006805 | Aqueous | MRSINFDKVIVEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0104986_141815 | 3300007734 | Freshwater | MRHINYDKVIVEWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKIEN* |
| Ga0104988_1078436 | 3300007735 | Freshwater | MRHINYDKVIVEWLDISSDGCDDAWNTEEQLKDLLPATCTTIGYLYEDNPHFIKTFATFSYNSDDSIDFGDCVCIPKGVVVSIKKLEN* |
| Ga0114340_12230252 | 3300008107 | Freshwater, Plankton | MRSINFDKVIIEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0114347_100075732 | 3300008114 | Freshwater, Plankton | MKHINYDKVIVEWLDISSDGCDEAWNTEEQLKDLVPALCTTIGYLYEDNKDWIKTFATYSFNSDQTLDFGDCVCIPKGVVRSIRKLEN* |
| Ga0114347_10104492 | 3300008114 | Freshwater, Plankton | MRHINYDKVIVEWLDISSDGCDEAWNTEEQLKDLVPALCTTIGYLYEDNKDWIKTFATYSFNSDQTLDFGDCVCIPKGVVRSIRKLEN* |
| Ga0114347_10195681 | 3300008114 | Freshwater, Plankton | VEWMDINSCDDAWNTEDQLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0114347_10771212 | 3300008114 | Freshwater, Plankton | MRSINFDKVIIEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0114347_11032902 | 3300008114 | Freshwater, Plankton | MRSINFDKVIVEWMDINSCDDAWNTEEHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0114350_100045234 | 3300008116 | Freshwater, Plankton | MRHGMKHINYDKVIVEWLDISSDGCDEAWNTEEQLKDLVPALCTTIGYLYEDNKDWIKTFATYSFNSDQTLDFGDCVCIPKGVVRSIRKLEN* |
| Ga0114350_11530621 | 3300008116 | Freshwater, Plankton | MRHGMRHINYDKVIVEWLDISSDGCDDAWNTEEQLKDLLPATCTTIGYLYEDNPHFIKTFATFSYNSDDSIDFGDCVCIPKGVVVSIKKLEN* |
| Ga0114351_11516842 | 3300008117 | Freshwater, Plankton | MRSINFDKVIISWLDINSCDNAWNTEDDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGCILSIKKLEN* |
| Ga0114841_10126765 | 3300008259 | Freshwater, Plankton | MKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLLPAKCTTIGYLYEDNKDWIKTFATYSINENLEDFDIGDAVVIPRGCILSIKKIEN* |
| Ga0114841_10147092 | 3300008259 | Freshwater, Plankton | MRHGMRHINYDKVIVEWLDISSDGCDEAWNTEEQLKDLVPALCTTIGYLYEDNKDWIKTFATYSFNSDQTLDFGDCVCIPKGVVRSIRKLEN* |
| Ga0114841_10161647 | 3300008259 | Freshwater, Plankton | MRHINYDKVIVEWLDISSEGCDDAWNTEDQLKNLVPAICTTIGYLYEDNKDWIKTFATFSFNSDNTIDFGDCVCIPRGVIKSIRKLEN* |
| Ga0114841_12746031 | 3300008259 | Freshwater, Plankton | KVIVEWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKIEN* |
| Ga0114349_11674573 | 3300008263 | Freshwater, Plankton | MRSINFDKVIVEWMDINSCDDAWNSEDHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0114349_12662363 | 3300008263 | Freshwater, Plankton | IFMRHGMKHINYDKVIVEWLDISSDGCDEAWNTEEQLKDLVPALCTTIGYLYEDNKDWIKTFATYSFNSDQTLDFGDCVCIPKGVVRSIRKLEN* |
| Ga0114363_10735031 | 3300008266 | Freshwater, Plankton | MSIGMRHINFDKVIISWLDINSCDNAWNTEEDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGVIISIKKLEN* |
| Ga0114363_11203501 | 3300008266 | Freshwater, Plankton | VEWMDINSCDDAWNSEDHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0114363_11496343 | 3300008266 | Freshwater, Plankton | MRSINYDKVIVEWMDINSCDDAWNNEDELKDLMPASCTTIGYLYDDNPHFIKTFATFSYNSDDTLDFGDCVVIPKG |
| Ga0114363_12081331 | 3300008266 | Freshwater, Plankton | MRHGMKHINYDKVIVEWLDISSDGCDDAWNTEEQLKDLLPATCTTIGYLYEDNPHFIKTFATFSYNSDDSIDFGDCVCIPKGVVVSIKKLEN* |
| Ga0114363_12111492 | 3300008266 | Freshwater, Plankton | MKSINFDKVIVEWMDINSCDDAWNSEEHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0114876_10191755 | 3300008448 | Freshwater Lake | MKSINFDKVIVEWMDINSCDDAWNSEDHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0114876_11294313 | 3300008448 | Freshwater Lake | MRSINFDKVIISWLDINSCDSAWNTEEDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGCILSIKKLEN* |
| Ga0114880_10644481 | 3300008450 | Freshwater Lake | SWLDINSCDNAWNTEEDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGVIISIKKLEN* |
| Ga0114880_10986454 | 3300008450 | Freshwater Lake | NLIAFTRSGMRSINFDKVIIEWMDINSCDDAWNTEDQLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0114880_11091894 | 3300008450 | Freshwater Lake | MRNGMRSINFDKVIISWLDINSCDNAWNTEDDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGCILSIKKLEN* |
| Ga0114880_11644843 | 3300008450 | Freshwater Lake | MRSINYDKVIVEWMDINSCDDAWNNEDELKDLMPASCTTIGYLYDDNPHFIKTFATFSYNSDDTLDFGDCVVIPKGCVVSIKKLEN* |
| Ga0105104_101281344 | 3300009168 | Freshwater Sediment | MRSINFDKVIVEWMDINSCDDAWNSEEHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0129333_100800496 | 3300010354 | Freshwater To Marine Saline Gradient | MRSINFDKVIVEWMDINSCDDAWNTEDQLKDLMPASCTTIGYLYEETPHFIKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0129333_105520793 | 3300010354 | Freshwater To Marine Saline Gradient | MRRGMKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKIEN* |
| Ga0129333_110612131 | 3300010354 | Freshwater To Marine Saline Gradient | MKPINFDKVIISWLDINSCENAWNTEEDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGVILS |
| Ga0129333_116163572 | 3300010354 | Freshwater To Marine Saline Gradient | MKPINFDKVIISWLDINSCDNAWNTEEDLKDLIPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGVILS |
| Ga0129336_1001182911 | 3300010370 | Freshwater To Marine Saline Gradient | MRSINFDKVIVEWMDINSCDDAWNTEDQLKDLMPASCTTIGYLYEETPHFIKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKMEN* |
| Ga0129336_103659162 | 3300010370 | Freshwater To Marine Saline Gradient | FNLIAFTRSGMRSINFDKVIVEWMDINSCDDAWNTEDELKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0129336_104701283 | 3300010370 | Freshwater To Marine Saline Gradient | IISWLDINSCDNAWNNEDDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGVILSIKKLEN* |
| Ga0164293_106538112 | 3300013004 | Freshwater | MKSINFDKVIIEWMDINSCDDAWNSEDHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0164293_107166673 | 3300013004 | Freshwater | MRHGMRSINFDKVIVEWMDINSCDDAWNTEDHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0164292_104926922 | 3300013005 | Freshwater | MRSINFDKVIVEWMDINSCDDAWNTEDELKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN* |
| Ga0181352_10219395 | 3300017747 | Freshwater Lake | MIFMRHGMKPINFDKVIVEWMDINSCDDAWNSEDHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0194138_102724712 | 3300018405 | Watersheds | MRSINFDKVIVEWMDINSCDDAWNTEDHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0181359_10772812 | 3300019784 | Freshwater Lake | MRSINFDKVIVEWMDINSCDDAWNTEDELKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSLKKLEN |
| Ga0211736_104526251 | 3300020151 | Freshwater | MKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLLPAKCTTIGYLYEDNKDWIKTFATYSINENSEDFDIGDAVVIPRGCILSIKKI |
| Ga0211734_109034023 | 3300020159 | Freshwater | MKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLLPAKCTTIGYLYEDNKDWIKTFATYSINENSEDFDIGDAVVIPRGCILSIKKIEN |
| Ga0211731_109888422 | 3300020205 | Freshwater | MRRGMKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLLPAKCTTIGYLYEDNKDWIKTFATYSINENSEDFDIGDAVVIPRGCILSIKKIEN |
| Ga0207909_10074251 | 3300020572 | Freshwater | DINSCDNAWNTEEDLKDLVPAMCTTIGYLYEENKDWVKTFATYSFNSDSLDVGDCVVIPRGVILSIKKLEN |
| Ga0222713_103402962 | 3300021962 | Estuarine Water | MKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKIEN |
| Ga0222712_100508575 | 3300021963 | Estuarine Water | MRHINFDKVIISWLDINSCDNAWNTEEDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGVIISIKKLEN |
| Ga0222712_104615561 | 3300021963 | Estuarine Water | EWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKIEN |
| Ga0222712_105755132 | 3300021963 | Estuarine Water | MRHINYDKVIVEWLDISSDGCDDAWNTEEQLKDLLPATCTTIGYLYEDNPHFIKTFATFSYNSDDSIDFGDCVCIPKGVVVSIKKLEN |
| Ga0222712_106096742 | 3300021963 | Estuarine Water | MRSINFDKVIVEWMDINSCDDAWNTEDHLKDLLPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0181353_11357743 | 3300022179 | Freshwater Lake | RSINFDKVIVEWMDINSCDDAWNTEDELKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTLDFGDCVVIPKGCVVSIKKLEN |
| Ga0214921_100367604 | 3300023174 | Freshwater | MKTINFDKVIIEWMDINSCDDAWNTEDHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCIVIPKGCVVSIKKLEN |
| Ga0214921_100419634 | 3300023174 | Freshwater | MKTINFDKVIIEWMDINSCDDAWNTEDHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCIVIPKGCVVSIKKLEN |
| Ga0208009_10256982 | 3300027114 | Deep Subsurface | MIFMRHGMKPINFDKVIVEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0208788_11022581 | 3300027499 | Deep Subsurface | MKPINFDKVIVEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0208975_10655892 | 3300027659 | Freshwater Lentic | MRHINFDKVIISWLDINSCDNAWNTEDDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGVIISIKKLEN |
| Ga0209598_101277471 | 3300027760 | Freshwater Lake | LDINSCDNAWNTEEDLKDLVPAMCTTIGYLYEENKDWVKTFATYSFNKDSLDVGDCVVIPRGVILSIKKLEN |
| Ga0209598_102560741 | 3300027760 | Freshwater Lake | LDINSCDNAWNTEEDLKDLVPAMCTTIGYLYEDNKDWVKTFATYSFNSDSLDVGDCVVIPRGVILSIKKLEN |
| Ga0209358_101259565 | 3300027804 | Freshwater Lake | VEWMDINSCDDAWNTEDELKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSLKKLEN |
| Ga0247723_10043977 | 3300028025 | Deep Subsurface Sediment | MRSINFDKVIVEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0247723_10142037 | 3300028025 | Deep Subsurface Sediment | MRSINFDKVIVEWMDINSCDDAWNSEENLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0247723_11210043 | 3300028025 | Deep Subsurface Sediment | MRSINFDKVIISWLDINSCDSAWNTEEDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGCILSIKKLEN |
| Ga0247723_11472422 | 3300028025 | Deep Subsurface Sediment | MRSINFDKVIVEWMDINSCDDAWNTEDELKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0315907_1000120736 | 3300031758 | Freshwater | MKHINYDKVIVEWLDISSDGCDEAWNTEEQLKDLVPALCTTIGYLYEDNKDWIKTFATYSFNSDQTLDFGDCVCIPKGVVRSIRKLEN |
| Ga0315907_107296083 | 3300031758 | Freshwater | MRSINFDKVIISWLDINSCDNAWNTEDDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGCILSIKKLEN |
| Ga0315909_1000269834 | 3300031857 | Freshwater | MKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLLPAKCTTIGYLYEDNKDWIKTFATYSINENLEDFDIGDAVVIPRGCILSIKKIEN |
| Ga0315909_100587516 | 3300031857 | Freshwater | MRHINYDKVIVEWLDISSEGCDDAWNTEDQLKNLVPAICTTIGYLYEDNKDWIKTFATFSFNSDNTIDFGDCVCIPRGVIKSIRKLEN |
| Ga0315909_100631657 | 3300031857 | Freshwater | MRSINFDKVIVEWMDINSCDDAWNTEEHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0315909_101385964 | 3300031857 | Freshwater | MKSINFDKVIVEWMDINSCDDAWNSEEHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0315909_101861891 | 3300031857 | Freshwater | KVIISWLDINSCDNAWNTEEDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIPRGVIISIKKLEN |
| Ga0315909_103953371 | 3300031857 | Freshwater | MKSINFDKVIIEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0315909_104254382 | 3300031857 | Freshwater | MRSINFDKVIIEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0315909_105467401 | 3300031857 | Freshwater | QTIFMRHGMRHINYDKVIVEWLDISSDGCDDAWNTEEQLKDLLPATCTTIGYLYEDNPHFIKTFATFSYNSDDSIDFGDCVCIPKGVVVSIKKLEN |
| Ga0315904_114489332 | 3300031951 | Freshwater | MRLGMKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKIEN |
| Ga0315901_101124833 | 3300031963 | Freshwater | MRSINFDKVIIEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNADDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0315901_104286241 | 3300031963 | Freshwater | RLGMKHINYDKVIVEWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKIEN |
| Ga0315906_104696311 | 3300032050 | Freshwater | NLIAFMRNGMRSINFDKVIIEWMDINSCDDAWNSEEHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0315906_108884402 | 3300032050 | Freshwater | MKPINFDKVIISWLDINSCENAWNTEEDLKDLVPATCTTIGYLYEENKDWVKTFATYSFNSDSTLDVGDAVVIP |
| Ga0315903_112367962 | 3300032116 | Freshwater | MRSINFDKVIVEWMDINSCDDAWNSEDHFKDLMPASCTTIGYLYEDTPHFVKTFATFSFNSDDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0334987_0558660_1_219 | 3300034061 | Freshwater | LDINSCDNAWNTEEDLKDLVPAMCTTIGYLYEENKDWVKTFATYSFNTDSLDVGDCVVIPRGVILSIKKLEN |
| Ga0334995_0093794_1186_1446 | 3300034062 | Freshwater | MKPINFDKVIISWLDINSCDNAWNTEEDLKDLIPATCTTIGYLYEENKDWVKTFATYSFNLDSTLDVGDAVVIPRGVILSIKKLEN |
| Ga0310130_0016827_2006_2269 | 3300034073 | Fracking Water | MRHINYDKVIVEWLDIQSCDNAWSSLDEFDKLIPAKCTTIGYLYDENKDWVKTFATYSINENSDDFDVGDAVVIPRGCIVSIKKIEN |
| Ga0310130_0093666_1_249 | 3300034073 | Fracking Water | DKVIVEWLDISSDGCDEAWNTEEQLKDLVPALCTTIGYLYEDNKDWIKTFATYSFNSDQTLDFGDCVCIPKGVVRSIRKLEN |
| Ga0335022_0364974_568_792 | 3300034095 | Freshwater | MRSINFDKVIVEWMDINSCDDAWNTEDHLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPK |
| Ga0335031_0411229_75_335 | 3300034104 | Freshwater | MRSINFDKVIIEWMDINSCDDAWNTEDQLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| Ga0335036_0378711_163_435 | 3300034106 | Freshwater | MRNGMRSINFDKVIVEWMDINSCDDAWNTEDYLKDLMPASCTTIGYLYEDTPHFVKTFATFSFNTDDTIDFGDCVVIPKGCVVSIKKLEN |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |