NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105021

Metagenome Family F105021

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105021
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 72 residues
Representative Sequence MNTLNKLLARWGYKLTRTDAVAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKEARG
Number of Associated Samples 53
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 19.00 %
% of genes near scaffold ends (potentially truncated) 23.00 %
% of genes from short scaffolds (< 2000 bps) 71.00 %
Associated GOLD sequencing projects 45
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (54.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(48.000 % of family members)
Environment Ontology (ENVO) Unclassified
(53.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(61.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 92.96%    β-sheet: 0.00%    Coil/Unstructured: 7.04%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13560HTH_31 28.00
PF00145DNA_methylase 6.00
PF02945Endonuclease_7 2.00
PF01402RHH_1 1.00
PF01381HTH_3 1.00
PF13884Peptidase_S74 1.00
PF03237Terminase_6N 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 6.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A54.00 %
All OrganismsrootAll Organisms46.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001836|RCM27_1007692All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae584Open in IMG/M
3300001842|RCM30_1078435Not Available1124Open in IMG/M
3300005069|Ga0071350_1000027All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes20132Open in IMG/M
3300005069|Ga0071350_1327117Not Available545Open in IMG/M
3300005525|Ga0068877_10699863Not Available543Open in IMG/M
3300005581|Ga0049081_10030909All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2035Open in IMG/M
3300005581|Ga0049081_10058457All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1454Open in IMG/M
3300005581|Ga0049081_10205062Not Available706Open in IMG/M
3300005581|Ga0049081_10209315All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes696Open in IMG/M
3300006030|Ga0075470_10004364All Organisms → Viruses4379Open in IMG/M
3300006030|Ga0075470_10016345All Organisms → cellular organisms → Bacteria2294Open in IMG/M
3300006030|Ga0075470_10020267All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2060Open in IMG/M
3300006030|Ga0075470_10062726Not Available1132Open in IMG/M
3300006030|Ga0075470_10067452Not Available1088Open in IMG/M
3300006030|Ga0075470_10141324Not Available706Open in IMG/M
3300006030|Ga0075470_10175094Not Available620Open in IMG/M
3300006641|Ga0075471_10171364Not Available1141Open in IMG/M
3300006641|Ga0075471_10274255Not Available863Open in IMG/M
3300006802|Ga0070749_10012128All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5549Open in IMG/M
3300006802|Ga0070749_10028116All Organisms → Viruses → environmental samples → uncultured marine virus3526Open in IMG/M
3300006802|Ga0070749_10155557All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300006802|Ga0070749_10166187All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1276Open in IMG/M
3300006802|Ga0070749_10265994All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage968Open in IMG/M
3300006802|Ga0070749_10410592All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage746Open in IMG/M
3300006802|Ga0070749_10414594Not Available742Open in IMG/M
3300006805|Ga0075464_10621211Not Available666Open in IMG/M
3300006805|Ga0075464_10639792Not Available656Open in IMG/M
3300006805|Ga0075464_10655504Not Available648Open in IMG/M
3300006805|Ga0075464_10766350Not Available599Open in IMG/M
3300006863|Ga0075459_1088037Not Available532Open in IMG/M
3300006875|Ga0075473_10027901All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2170Open in IMG/M
3300006875|Ga0075473_10384217Not Available568Open in IMG/M
3300006917|Ga0075472_10612091Not Available546Open in IMG/M
3300006917|Ga0075472_10633291Not Available536Open in IMG/M
3300007234|Ga0075460_10022164All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2488Open in IMG/M
3300007346|Ga0070753_1080003Not Available1296Open in IMG/M
3300007363|Ga0075458_10135501Not Available763Open in IMG/M
3300007708|Ga0102859_1137989Not Available712Open in IMG/M
3300007972|Ga0105745_1006198Not Available2680Open in IMG/M
3300008055|Ga0108970_11026830Not Available906Open in IMG/M
3300008107|Ga0114340_1152130Not Available851Open in IMG/M
3300008108|Ga0114341_10004724Not Available11969Open in IMG/M
3300008110|Ga0114343_1006359Not Available7267Open in IMG/M
3300008113|Ga0114346_1000887Not Available28928Open in IMG/M
3300008266|Ga0114363_1085661All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1163Open in IMG/M
3300008266|Ga0114363_1166341Not Available716Open in IMG/M
3300008267|Ga0114364_1127999All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage741Open in IMG/M
3300008448|Ga0114876_1099067All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1166Open in IMG/M
3300010354|Ga0129333_10148364All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2153Open in IMG/M
3300010354|Ga0129333_10344586Not Available1326Open in IMG/M
3300010354|Ga0129333_10844037Not Available778Open in IMG/M
3300010354|Ga0129333_11250748Not Available615Open in IMG/M
3300010370|Ga0129336_10638373Not Available566Open in IMG/M
3300011116|Ga0151516_10279Not Available28505Open in IMG/M
3300011116|Ga0151516_10344All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes24483Open in IMG/M
3300012012|Ga0153799_1058860All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage701Open in IMG/M
3300012012|Ga0153799_1058861All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage701Open in IMG/M
3300012666|Ga0157498_1059683All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes586Open in IMG/M
3300013372|Ga0177922_10577287All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes805Open in IMG/M
3300017754|Ga0181344_1107059Not Available810Open in IMG/M
3300019784|Ga0181359_1005400All Organisms → Viruses4163Open in IMG/M
3300020172|Ga0211729_10557192Not Available506Open in IMG/M
3300021961|Ga0222714_10452914Not Available667Open in IMG/M
3300021961|Ga0222714_10558620Not Available578Open in IMG/M
3300021962|Ga0222713_10264222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium1114Open in IMG/M
3300021963|Ga0222712_10001398Not Available29830Open in IMG/M
3300021963|Ga0222712_10216837All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1243Open in IMG/M
3300021963|Ga0222712_10289404Not Available1032Open in IMG/M
3300022179|Ga0181353_1008331All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2555Open in IMG/M
3300025445|Ga0208424_1000257All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6499Open in IMG/M
3300025445|Ga0208424_1000898Not Available3416Open in IMG/M
3300025445|Ga0208424_1004949Not Available1485Open in IMG/M
3300025445|Ga0208424_1005560Not Available1410Open in IMG/M
3300025445|Ga0208424_1030543Not Available648Open in IMG/M
3300025585|Ga0208546_1000903All Organisms → Viruses9759Open in IMG/M
3300025585|Ga0208546_1003602All Organisms → Viruses4460Open in IMG/M
3300025585|Ga0208546_1005206All Organisms → cellular organisms → Bacteria3629Open in IMG/M
3300025585|Ga0208546_1018508Not Available1774Open in IMG/M
3300025585|Ga0208546_1047517All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1026Open in IMG/M
3300025585|Ga0208546_1066773Not Available837Open in IMG/M
3300025630|Ga0208004_1064352Not Available948Open in IMG/M
3300025635|Ga0208147_1001531All Organisms → Viruses → environmental samples → uncultured marine virus7417Open in IMG/M
3300025635|Ga0208147_1070682Not Available871Open in IMG/M
3300025848|Ga0208005_1045367Not Available1361Open in IMG/M
3300025872|Ga0208783_10119615Not Available1140Open in IMG/M
3300025872|Ga0208783_10218793All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage782Open in IMG/M
3300025889|Ga0208644_1070013All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1841Open in IMG/M
3300025896|Ga0208916_10096666Not Available1247Open in IMG/M
3300025896|Ga0208916_10185123Not Available900Open in IMG/M
3300027659|Ga0208975_1003606Not Available5893Open in IMG/M
3300027816|Ga0209990_10007505All Organisms → cellular organisms → Bacteria → PVC group7080Open in IMG/M
3300027816|Ga0209990_10014507All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4663Open in IMG/M
3300031758|Ga0315907_10251685All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1465Open in IMG/M
3300031787|Ga0315900_10497724All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage925Open in IMG/M
3300031857|Ga0315909_10102381Not Available2463Open in IMG/M
3300031857|Ga0315909_10169788All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1768Open in IMG/M
3300031857|Ga0315909_10261244All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1321Open in IMG/M
3300032093|Ga0315902_10307337All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1495Open in IMG/M
3300032116|Ga0315903_10934080All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage615Open in IMG/M
3300032116|Ga0315903_11100316All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage545Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous48.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater8.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton7.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake6.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water6.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic5.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater2.00%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton2.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.00%
Freshwater, Surface IceEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice1.00%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water1.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.00%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001836Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM27, ROCA_DNA191_0.2um_MCP-N_C_3aEnvironmentalOpen in IMG/M
3300001842Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM30, ROCA_DNA203_0.2um_MCP-S_C_2bEnvironmentalOpen in IMG/M
3300005069Metagenomes from Harmful Algal Blooms in Lake Erie, HABS-E2014-0024EnvironmentalOpen in IMG/M
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006863Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNAEnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006917Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300007972Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0umEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300011116Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015NovEnvironmentalOpen in IMG/M
3300012012Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300012666Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2EnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300025445Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025585Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025635Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025848Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025872Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
RCM27_100769223300001836Marine PlanktonMNTLNKLLARLGYKLTRADAIAEQSDLAIGFAALEAERNDLREQNKELKRKLACKTAGEFYWRKQARKAREVIE*
RCM30_107843513300001842Marine PlanktonMNTLNKLLARLGYKLTRADAIAEQSDLAIGFAALEAERNDLREQNKELKRKLACKTAGEFYXXXXXXXXXEVIE*
Ga0071350_1000027143300005069FreshwaterMKTINKLLARWGYKISKTDPAAEQSDLQLAYAALEAACNELRARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0071350_132711723300005069FreshwaterMNTLNKLLARWGYKISKTDKVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEWYWRKQAKEARR*
Ga0068877_1069986323300005525Freshwater LakeMKTINKLLARWGYKISKTDAAAEQSDLQLAYAALEAERSELQARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0049081_1003090933300005581Freshwater LenticMADGPQADGPDFLLRMKTINKLLARWGYKISKTDEVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEWYWRKQAKEARR*
Ga0049081_1005845723300005581Freshwater LenticMNTLNKLLAQWGYKISKTDAAAEQSDLQLAYAALEAERNELQARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0049081_1020506223300005581Freshwater LenticMNTLNKLLALLGYKISKTDPAAEQSDLQLAYAALEAACNELRARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0049081_1020931523300005581Freshwater LenticMKTINKLLARWGYKISKTDAAAEQSDLQLAYAALEAERSELQARNKELTRKLAARTSGEWYWRKQAREARR*
Ga0075470_1000436473300006030AqueousMKTINKILARWGYKLTRTDAIAEQSDLAIGYAALEAERNDLREQTKELKRKLACKTASEYYWKKQAKEARG*
Ga0075470_1001634583300006030AqueousMNTLNKLLARWGYQLTRSDAVAEQSELQMKYAALEVATDELREQNKELKRKLACRTSGEWYWKKKAQRVREVIE*
Ga0075470_1002026743300006030AqueousMNTLNKLLARLGYQLTRTDPTATQSDLQLKYAELETTANGLRQQNKELKRKLACRTSGEWYWRKKAQAREVIE*
Ga0075470_1006272613300006030AqueousVAQTRFAMNTLNKLLARWGYQLTRTDAVAEQSELQMKYAALEVAADELREQNKELKRKLACRTSGEWYWKKKAQRAREVIE*
Ga0075470_1006745233300006030AqueousMNTLNKLLARCGYKLTRTDAIAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKEARG*
Ga0075470_1014132423300006030AqueousMNTLNKLLARTGYQLTRTDSAATQSDLQLKYAELEATANDLREQNKELKRKLACRTSGEWYWRKKAQAREVIE*
Ga0075470_1017509423300006030AqueousMNTLNKLLARWGYQLTRTDAVAAQSDLQLAYACLEAQAHDLKNQNKELKRKLAARTAGEWYWRKQAKSARGVIE*
Ga0075471_1017136423300006641AqueousMDFLTMNTLNKLLARWGYQLTRSDAVAEQSELQMKYAALEVAADELREQNKELKRKLACKTASEHYWRKQAQRAREVIE*
Ga0075471_1027425523300006641AqueousVAQTRFAMHTLNKLLARWGYKLTRSDAIAEQSDLAIGYAALEVERNDLRDQNKELKRKLACKTAGEFYWRKQALKAREVIE*
Ga0070749_1001212883300006802AqueousMKTINKLLARWGYKLTRTDAAAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKEARG*
Ga0070749_1002811683300006802AqueousMRMKTINKLLARWGYQLTRTDAIAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAQRAREVIE*
Ga0070749_1015555753300006802AqueousMNTLNKLLARWGLQLTRTDAIAEQSDLTIGYAALEAERNDLREQTKELKRKLACKTAGEYYWRKQAKEARG*
Ga0070749_1016618733300006802AqueousMNTLNKLLARWGYKISKTDKVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGE
Ga0070749_1026599423300006802AqueousMKTINKLLARWGYKISKTDPAAEQSDLQLAYAALEAACNELRARNKDLTRKLAARTSGEWYWRKQAKEARR*
Ga0070749_1041059223300006802AqueousMNTLNNLLARWGYEISKTDKVATESELQLAYAALESERNELRAQKKELLRKLAARTAGEWYWRKQAKSAREVIE*
Ga0070749_1041459423300006802AqueousVAQTRSPMNTLNKLLARLGYQLTRTDPTATQSDLQLKYAELETTANGLRQQNKELKRKLACRTSGEWYWRKKAQAREVIE*
Ga0075464_1062121123300006805AqueousVAQTRSPMNTLNKLLARLGYQLTRTDPTATQSDLQLKYAELEATANDLREQNKELKRKLACRTSGEWYWRKKAQAREVIE*
Ga0075464_1063979233300006805AqueousMNTLNKLLARWGYKLTRTDAVAEQSDLQLAYACLEAQVDDLKNQNKELKRKLAARTAGEWYWRKQAKEARG*
Ga0075464_1065550423300006805AqueousMNTLNKLLARLGYQLTRTDPTATQSDLQLKYAELETTANGLRQQNKELKRKLASRTSGEWYWRKKAQAREVIE*
Ga0075464_1076635023300006805AqueousMKTINKILARWGYKLTRTDAIAEQSDLAIGYAALEAERNDLREQNKELKRKLACKTASEYYWRKQAKEARK*
Ga0075459_108803713300006863AqueousKLTRTDAIAEQSDLAIGYAALEAERNDLREQTKELKRKLACKTASEYYWKKQAKEARG*
Ga0075473_1002790183300006875AqueousPIFPMNTLNKLLARWGLQLTRTDAIAEQSDLTIGYAALEAERNDLREQTKELKRKLACKTAGEYYWRKQAKEARG*
Ga0075473_1038421713300006875AqueousMDFLTMNTLNKLLARWGYQLTRSDAVAEQSELQMKYAALEVATDELREQNKELKRKLACRTSGEWYWKKKA
Ga0075472_1061209113300006917AqueousLTRTDAVAEQSELQMKYAELEVASDELREQNKELKRKLACRTSGEWYWKKKAQRAREVIE
Ga0075472_1063329113300006917AqueousSPMNTLNKLLARWGYKMTRTDAVSEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKEARG*
Ga0075460_1002216423300007234AqueousMKTINKLLARWGYQLTRTDAIAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAQRAREVIE*
Ga0070753_108000313300007346AqueousKTIWTCNEGHVVAQTRFAMNTLNKLLARWGYQLTRTDAVAEQSELQMKYAALEVAADELREQNKELKRKLACRTSGEWYWKKKAQRAREVIE*
Ga0075458_1013550123300007363AqueousMNTLNKLLARCGYKLTRTDAIAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEW
Ga0102859_113798933300007708EstuarineMKTINKLLAQWGYKISKTDAAAEQSDLQLAYAALEAERNELQARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0105745_100619883300007972Estuary WaterMNTLNKLLARWGYKISKTDKVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEWYWRKQAREARK*
Ga0108970_1102683023300008055EstuaryMNTLNKLLARWGYKLTRTDAIAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKEARG*
Ga0114340_115213013300008107Freshwater, PlanktonGPQADGPDFLLRMKTINKLLARWGYKISKTDPAAEQSDLQLAYAALEAACNELRARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0114341_10004724113300008108Freshwater, PlanktonMKTINKLLARWGYKISKTDPAAEQSDLQLAYAALEAERNELQARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0114343_100635923300008110Freshwater, PlanktonMKTINKLLAQWGYKISKTDAAAEQSDLQLAYAALEAERSELQARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0114346_1000887343300008113Freshwater, PlanktonMKTINKLLARWGYKISKTDAAAEQSDLQLAYAALEAERNELQARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0114363_108566133300008266Freshwater, PlanktonMKTINKILARWGYKLTRTDAIAEQSDLAIGYAALEAERNDLREQNKELKRKLACKTAGEYYWKKQAREARG*
Ga0114363_116634123300008266Freshwater, PlanktonMKTINNILARWGYKLTRTDAIAEQSDLAIGYAALEAERNDLREQNKELKRKLACKTAGEYYWKKQAREARG*
Ga0114364_112799923300008267Freshwater, PlanktonMNTLNKLLARWGYEISRTDKVATESALQLAYAALEAERNDLRAQKKELLRKLAARTAGEWYWRKQAKEARG*
Ga0114876_109906723300008448Freshwater LakeMNTLNKLLAQWGYKISKTDAAAEQSDLQLAYAALEAERSELQARNKELTRKLAARTSGEWYWRKQAKEARR*
Ga0129333_1014836433300010354Freshwater To Marine Saline GradientMNTLNKLLARWGYKLTRTDAVAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKEARG*
Ga0129333_1034458653300010354Freshwater To Marine Saline GradientMKTINKLLARWGYKISKTDPAAEQSDLQLAYAALEAACNELRARNKELTRKLAARTSGEWYWRKQAKEARG*
Ga0129333_1084403723300010354Freshwater To Marine Saline GradientMNTLNKLLARWGYKMTRTDAVSEQSDLQLAYACLEAQVDDLKNQNKELKRKLAARTAGEWYWRKQAKEARG*
Ga0129333_1125074823300010354Freshwater To Marine Saline GradientMKTIKKLLARWGYQLTRSDAVAEQSELQMKYAELEVAADELREQNKELKRKLACRTSGEWYWKKKAQRAREVIE*
Ga0129336_1063837333300010370Freshwater To Marine Saline GradientHPDRPIFPMNTLNKLLARWGLQLTRTDAIAEQSDLTIGYAALEAERNDLREQTKELKRKLACKTASEYYWKKQAKEARG*
Ga0151516_10279123300011116FreshwaterMNTLNKLLARWGYEISKTDKVATKSELQLAYAALESERNELRAQKKELLRKLAARTAGEWYWRKQAKEARK*
Ga0151516_10344133300011116FreshwaterMNTLNKLLARWGLKLTRTDQVQIFPDLKPHILLAQAENEELREQNKELKRKLACRTSGEWYWKKKAQRAREVIE*
Ga0153799_105886013300012012FreshwaterMKTINKLLARWGYKISKTDEVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEWYWRKQAKEAR
Ga0153799_105886113300012012FreshwaterMNTLNKLLAQWGYKISKTDAAAEQSDLQLAYAALEAERNELQARNKELTRKLAARTSGEWYWRKQAKEAR
Ga0157498_105968313300012666Freshwater, Surface IceMKTINKLLARWGYKISKTDEVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEWYWRKQAKEARR*
Ga0177922_1057728723300013372FreshwaterMKTINKLLARWGYKISKTDEVSTESDLQLAYSALEAERNDLQAQKRELLRKLAARTSGEWYWRKQAKEARR*
Ga0181344_110705913300017754Freshwater LakeNTLNKLLAQWGYKISKTDAAAEQSDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEWYWRKQAKEARR
Ga0181359_100540013300019784Freshwater LakeMNTLNKLLAQWGYKISKTDAAAEQSDLQLAYAALEAERNELQARNKELTRKLAARTSGEWYWRKQAKEARR
Ga0211729_1055719223300020172FreshwaterMKTINKLLARWGYKISKTDKVSTESDLQLAYSALEAERNDLQAQKRELLRKLAARTSGEWYWRKQAKEAR
Ga0222714_1045291413300021961Estuarine WaterSLFPMNTLNKLLARWGYQLTRTDAVATQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKSAREVIE
Ga0222714_1055862033300021961Estuarine WaterNKLLARWGYQLTRTDALAAQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKSAREVIE
Ga0222713_1026422223300021962Estuarine WaterMNTLNKLLARWGYKLTRTDAVAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKSAREVIE
Ga0222712_10001398153300021963Estuarine WaterMDFLTMNTLNKLLARWGYQLTRSDAVAEQSELQMKYAALEVATDELREQNKELKRKLACRTSGEWYWKKKAQRAREVIE
Ga0222712_1021683723300021963Estuarine WaterMKTINKILARWGYKLTRTDAIAEQSDLAIGYAALEAERNDLREQNKELKRKLACKTASEYYWRKQAKEARK
Ga0222712_1028940433300021963Estuarine WaterMGNFEAMNTLNKLLARWGYKLTRTDAVAEQSELQTKYAALEVAADELREQNKELKRKLAARTAGEWYWRKQAKEARG
Ga0181353_100833183300022179Freshwater LakeMKTINKLLAQWGYKISKTDAAAEQSDLQLAYAALEAERSELQARNKELTRKLAARTSGEWYWRKQAKEARR
Ga0208424_1000257113300025445AqueousMRMKTINKLLARWGYQLTRTDAIAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAQRAREVIE
Ga0208424_1000898103300025445AqueousMNTLNKLLARWGYKMTRTDAVSEQSDLQLAYACLEAQVDDLKNQNKELKRKLAARTAGEWYWRKQAKEARG
Ga0208424_100494963300025445AqueousMKTINKLLARWGYKLTRTDAAAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKEARG
Ga0208424_100556023300025445AqueousMNTLNKLLARCGYKLTRTDAIAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKEARG
Ga0208424_103054313300025445AqueousMNTLNKLLARWGYQLTRTDALAAQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAKEARG
Ga0208546_1000903133300025585AqueousMNTLNKLLARWGLQLTRTDAIAEQSDLTIGYAALEAERNDLREQTKELKRKLACKTAGEYYWRKQAKEARG
Ga0208546_100360273300025585AqueousMKTINKILARWGYKLTRTDAIAEQSDLAIGYAALEAERNDLREQTKELKRKLACKTASEYYWKKQAKEARG
Ga0208546_100520653300025585AqueousMNTLNKLLARWGYKLTRTDAVSEQSDLQLAYACLEAQVDDLKNQNKELKRKLAARTAGEWYWRKQAKEARG
Ga0208546_101850843300025585AqueousVAQTRFAMNTLNKLLARWGYQLTRTDAVAEQSELQMKYAALEVAADELREQNKELKRKLACRTSGEWYWKKKAQRAREVIE
Ga0208546_104751723300025585AqueousMNTLNKLLARLGYQLTRTDPTATQSDLQLKYAELETTANGLRQQNKELKRKLACRTSGEWYWRKKAQAREVIE
Ga0208546_106677323300025585AqueousMNTLNKLLARTGYQLTRTDSAATQSDLQLKYAELEATANDLREQNKELKRKLACRTSGEWYWRKKAQAREVIE
Ga0208004_106435243300025630AqueousASPMNTLNKLLARTGYQLTRTDSAATQSDLQLKYAELEATANDLREQNKELKRKLACRTSGEWYWRKKAQAREVIE
Ga0208147_1001531143300025635AqueousMKTINKLLARWGYQLTRTDAIAEQSDLQLAYACLEAQADDLKNQNKELKRKLAARTAGEWYWRKQAQRAREVIE
Ga0208147_107068223300025635AqueousMNTLNKLLARWGYKMTRTDAVSEQSDLQLAYACLEAQVDDLKNQNKELKRKLAARTTGEWYWRKQAKEARG
Ga0208005_104536723300025848AqueousMDFLTMNTLNKLLARLGYQLTRSDAVAEQSELQMNYAALEVAADELREQNKELKRKLACKTASEHYWRKQAQRAREVIE
Ga0208783_1011961523300025872AqueousMDFLTMNTLNKLLARWGYQLTRSDAVAEQSELQMKYAALEVAADELREQNKELKRKLACKTASEHYWRKQAQRAREVIE
Ga0208783_1021879333300025872AqueousMNTLNKLLARWGYKLTRTDAVSEQSDLQLAYACLEAQVDDLKNQNKELKRKLAARTTGEWYWRKQAKEARG
Ga0208644_107001323300025889AqueousMKTINKLLARWGYKISKTDPAAEQSDLQLAYAALEAACNELRARNKDLTRKLAARTSGEWYWRKQAKEARR
Ga0208916_1009666613300025896AqueousIVAQHASPMNTLNKLLARWGLQLTRTDAIAEQSDLTIGYAALEAERNDLREQTKELKRKLACKTAGEYYWRKQAKEARG
Ga0208916_1018512333300025896AqueousMNTLNKLLARLGYQLTRTDPTATQSDLQLKYAELETTANDLREQNKELKRKLACRTSGEWYWRKKAQAREVIE
Ga0208975_100360663300027659Freshwater LenticMKTINKLLARWGYKISKTDEVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEWYWRKQAKEARR
Ga0209990_10007505193300027816Freshwater LakeMNTLNKLLARWGYKISKTDKVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEYYWKKQAKEARR
Ga0209990_1001450713300027816Freshwater LakeMKTINKLLARWGYKISKTDAAAEQSDLQLAYAALEAERSELQARNKELTRKLAARTSGEWYWRKQAKEARR
Ga0315907_1025168523300031758FreshwaterMKTINKILARWGYKLTRTDAIAEQSDLAIGYAALEAERNDLREQNKELKRKLACKTAGEYYWKKQAREARG
Ga0315900_1049772423300031787FreshwaterMNTLNKLLARWGYKISTTDPAAEQSDLQLAYAALEAACNELRARNKELTRKLAARTSGEWYWRKQAREARR
Ga0315909_1010238133300031857FreshwaterMNTLNKLLARWGYKISKTDEVSTESDLQLAYSALEAERNDLQAQKRELLRKLAARTSGEWYWRKQAKEARR
Ga0315909_1016978833300031857FreshwaterMKTINKLLARWGYKISKTDKVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEWYWRKQAKEARR
Ga0315909_1026124423300031857FreshwaterMKTINNILARWGYKLTRTDAIAEQSDLAIGYAALEAERNDLREQNKELKRKLACKTAGEYYWKKQAREARG
Ga0315902_1030733713300032093FreshwaterMNTLNKLLAQWGYKISKTDAAAEQSDLQLAYAALEAERNELQARNKELTRKLAARTSGEW
Ga0315903_1093408013300032116FreshwaterMNTLNKLLARWGYKISKTDKVSTESDLQLAYSALEAERNDLQAQKKELLRKLAARTSGEWYWRKQ
Ga0315903_1110031613300032116FreshwaterMKTINKLLARWGYKISKTDPAAEQSDLQLAYAALEAERNELQARNKELTRKLAARTSGEW

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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