NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104921

Metagenome Family F104921

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104921
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 127 residues
Representative Sequence MTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA
Number of Associated Samples 78
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 74.00 %
% of genes near scaffold ends (potentially truncated) 35.00 %
% of genes from short scaffolds (< 2000 bps) 81.00 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (68.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil
(22.000 % of family members)
Environment Ontology (ENVO) Unclassified
(41.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(35.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 15.38%    β-sheet: 19.23%    Coil/Unstructured: 65.38%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF04002RadC 4.00
PF10431ClpB_D2-small 2.00
PF12323HTH_OrfB_IS605 2.00
PF01850PIN 2.00
PF13470PIN_3 1.00
PF01541GIY-YIG 1.00
PF04014MazE_antitoxin 1.00
PF13155Toprim_2 1.00
PF00499Oxidored_q3 1.00
PF02661Fic 1.00
PF11848DUF3368 1.00
PF01934HepT-like 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2003DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motifReplication, recombination and repair [L] 4.00
COG0839NADH:ubiquinone oxidoreductase subunit 6 (chain J)Energy production and conversion [C] 1.00
COG2361HEPN domain protein, predicted toxin of MNT-HEPN systemDefense mechanisms [V] 1.00
COG2445Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 familyGeneral function prediction only [R] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A68.00 %
All OrganismsrootAll Organisms32.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001213|JGIcombinedJ13530_101174797Not Available570Open in IMG/M
3300001213|JGIcombinedJ13530_109100867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2417Open in IMG/M
3300003432|JGI20214J51088_10608000Not Available693Open in IMG/M
3300003541|JGI20214J51650_10155731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium1568Open in IMG/M
3300003541|JGI20214J51650_10431891Not Available921Open in IMG/M
3300003997|Ga0055466_10276089Not Available510Open in IMG/M
3300004067|Ga0055485_10187782Not Available582Open in IMG/M
3300005289|Ga0065704_10027976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1788Open in IMG/M
3300005289|Ga0065704_10158462All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1373Open in IMG/M
3300005289|Ga0065704_10170911Not Available1292Open in IMG/M
3300005294|Ga0065705_10065802Not Available684Open in IMG/M
3300005294|Ga0065705_10156454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1860Open in IMG/M
3300005294|Ga0065705_10290790Not Available1078Open in IMG/M
3300005294|Ga0065705_10684673Not Available660Open in IMG/M
3300005295|Ga0065707_10058134Not Available828Open in IMG/M
3300005471|Ga0070698_100225564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1807Open in IMG/M
3300005985|Ga0081539_10055824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium2195Open in IMG/M
3300006755|Ga0079222_11581940Not Available620Open in IMG/M
3300006845|Ga0075421_100221763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium2330Open in IMG/M
3300006871|Ga0075434_102618287Not Available505Open in IMG/M
3300006880|Ga0075429_101502649Not Available586Open in IMG/M
3300007004|Ga0079218_12249959Not Available635Open in IMG/M
3300009053|Ga0105095_10017763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3829Open in IMG/M
3300009078|Ga0105106_11157728Not Available549Open in IMG/M
3300009146|Ga0105091_10234442Not Available882Open in IMG/M
3300009146|Ga0105091_10289212Not Available797Open in IMG/M
3300009146|Ga0105091_10310428Not Available771Open in IMG/M
3300009146|Ga0105091_10542763Not Available595Open in IMG/M
3300009147|Ga0114129_11033636Not Available1033Open in IMG/M
3300009147|Ga0114129_11528033Not Available819Open in IMG/M
3300009147|Ga0114129_11846628Not Available734Open in IMG/M
3300009153|Ga0105094_10051045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium2293Open in IMG/M
3300009157|Ga0105092_10520605Not Available683Open in IMG/M
3300009162|Ga0075423_10295258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1698Open in IMG/M
3300009168|Ga0105104_10781064Not Available554Open in IMG/M
3300009179|Ga0115028_10578630Not Available834Open in IMG/M
3300009553|Ga0105249_11915452Not Available665Open in IMG/M
3300010041|Ga0126312_11026572Not Available604Open in IMG/M
3300010044|Ga0126310_10447248Not Available932Open in IMG/M
3300010399|Ga0134127_11748912Not Available697Open in IMG/M
3300011402|Ga0137356_1071004Not Available662Open in IMG/M
3300011413|Ga0137333_1000311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi13214Open in IMG/M
3300011441|Ga0137452_1041335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1453Open in IMG/M
3300012021|Ga0120192_10054938Not Available721Open in IMG/M
3300012039|Ga0137421_1145044Not Available698Open in IMG/M
3300012157|Ga0137353_1032930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium907Open in IMG/M
3300012161|Ga0137336_1023712Not Available1091Open in IMG/M
3300012164|Ga0137352_1091387Not Available605Open in IMG/M
3300012166|Ga0137350_1022321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1178Open in IMG/M
3300012179|Ga0137334_1004752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium2463Open in IMG/M
3300012204|Ga0137374_10212542Not Available1655Open in IMG/M
3300012204|Ga0137374_10321270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1261Open in IMG/M
3300012228|Ga0137459_1015911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium2093Open in IMG/M
3300012350|Ga0137372_10617729Not Available793Open in IMG/M
3300012353|Ga0137367_10090985Not Available2252Open in IMG/M
3300012353|Ga0137367_10146587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1724Open in IMG/M
3300012353|Ga0137367_10589059Not Available779Open in IMG/M
3300012354|Ga0137366_10118151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium2003Open in IMG/M
3300012355|Ga0137369_10118542Not Available2144Open in IMG/M
3300012355|Ga0137369_10164036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1751Open in IMG/M
3300012356|Ga0137371_10785501Not Available726Open in IMG/M
3300012360|Ga0137375_10163246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2159Open in IMG/M
3300012360|Ga0137375_10825472Not Available743Open in IMG/M
3300012532|Ga0137373_11208131Not Available533Open in IMG/M
3300012676|Ga0137341_1035924Not Available821Open in IMG/M
3300013760|Ga0120188_1003505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1150Open in IMG/M
3300014255|Ga0075320_1025021Not Available988Open in IMG/M
3300014301|Ga0075323_1151443Not Available533Open in IMG/M
3300014864|Ga0180068_1001880All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra2789Open in IMG/M
3300014867|Ga0180076_1026554Not Available972Open in IMG/M
3300014873|Ga0180066_1047343Not Available845Open in IMG/M
3300014875|Ga0180083_1060386Not Available792Open in IMG/M
3300014877|Ga0180074_1008706All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra1825Open in IMG/M
3300014877|Ga0180074_1078690Not Available726Open in IMG/M
3300014880|Ga0180082_1115798Not Available613Open in IMG/M
3300014881|Ga0180094_1100355Not Available666Open in IMG/M
3300014884|Ga0180104_1154335Not Available678Open in IMG/M
3300014885|Ga0180063_1063536Not Available1080Open in IMG/M
3300015259|Ga0180085_1007408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium3006Open in IMG/M
3300015373|Ga0132257_103460420Not Available574Open in IMG/M
3300018053|Ga0184626_10270661Not Available709Open in IMG/M
3300018059|Ga0184615_10728903Not Available501Open in IMG/M
3300018075|Ga0184632_10290829Not Available708Open in IMG/M
3300018084|Ga0184629_10268955Not Available894Open in IMG/M
3300018084|Ga0184629_10328589Not Available805Open in IMG/M
3300019377|Ga0190264_11230508Not Available625Open in IMG/M
3300021090|Ga0210377_10000193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi58646Open in IMG/M
3300021090|Ga0210377_10024947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi4333Open in IMG/M
3300021090|Ga0210377_10524571Not Available680Open in IMG/M
3300025313|Ga0209431_10673018Not Available768Open in IMG/M
3300026095|Ga0207676_10603686Not Available1054Open in IMG/M
3300027163|Ga0209878_1012124Not Available1200Open in IMG/M
3300027675|Ga0209077_1047088Not Available1178Open in IMG/M
3300027818|Ga0209706_10028877All Organisms → cellular organisms → Bacteria2815Open in IMG/M
3300027887|Ga0208980_10101534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1687Open in IMG/M
3300027909|Ga0209382_11509084Not Available669Open in IMG/M
3300029304|Ga0119857_1000062All Organisms → cellular organisms → Bacteria77088Open in IMG/M
3300030620|Ga0302046_11284254Not Available573Open in IMG/M
3300031949|Ga0214473_10028450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi6553Open in IMG/M
3300031949|Ga0214473_11184603Not Available792Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil22.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment11.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.00%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland6.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere5.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere3.00%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.00%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial2.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.00%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.00%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.00%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.00%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Anaerobic BioreactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Anaerobic Bioreactor1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004067Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011402Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2EnvironmentalOpen in IMG/M
3300011413Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2EnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300012021Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012157Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2EnvironmentalOpen in IMG/M
3300012161Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2EnvironmentalOpen in IMG/M
3300012164Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2EnvironmentalOpen in IMG/M
3300012166Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2EnvironmentalOpen in IMG/M
3300012179Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012228Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2EnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012676Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2EnvironmentalOpen in IMG/M
3300013760Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2EnvironmentalOpen in IMG/M
3300014255Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2EnvironmentalOpen in IMG/M
3300014301Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1EnvironmentalOpen in IMG/M
3300014864Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10DEnvironmentalOpen in IMG/M
3300014867Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT433_16_10DEnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300014875Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10DEnvironmentalOpen in IMG/M
3300014877Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10DEnvironmentalOpen in IMG/M
3300014880Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10DEnvironmentalOpen in IMG/M
3300014881Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1DaEnvironmentalOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015259Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10DEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027163Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027675Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300029304Anaerobic bioreactor microbial community of Freshwater lake and wastewater samples from Australia - AOM-metagenome-IlluminaEngineeredOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10117479713300001213WetlandNLSVAQVGTGMFSVTMQVIMVVRFPTDVPAGPPVVINTDHALPQATVTASPTVQAATGELMYSNGELPNAFDGETEGFQAFLQVHGYGPPTREVLIEWATNSQGGS*
JGIcombinedJ13530_10910086713300001213WetlandMTEPNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVITVVRFPTDVPAGSPVIINTDHAVLQTPEFASTTVQTTAGELMYGNGELPNAFDGETEGFQAFAQVHGYVPPTREVLTQWATNS
JGI20214J51088_1060800023300003432WetlandMTELNNNTPIFKPEIVAPPSVSNLSVAPVGTGMFSVTMQVIMVVRFPPDVPTGLPVIIDTDNPVAQAPAKASIIGQAAVGELIYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQW
JGI20214J51650_1015573123300003541WetlandMTELNNNTPIFKPEIVAPPSVSNLSVAPVGTGMFSVTMQVIMVVRFPPDVPTGLPVIIDTDNPVAQAPAKASIIGQAAVGELIYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWVTNSQGGM*
JGI20214J51650_1043189133300003541WetlandMIEPSNNTPVIKPEIVAPPSVSNLSVTSAGTGMFSVTMQVIMVVRFPTDLPVGSPLVINTDHVLAQTPAIASTTGLAATGELMYGDGELPNALDGETEAFQAFMQVHGYVPPTREVLIQWATNSQGG
Ga0055466_1027608913300003997Natural And Restored WetlandsTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDTPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFVQIHGYVPPTREVLIQWARNSQGGA*
Ga0055485_1018778213300004067Natural And Restored WetlandsMTEPNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISADNAVPQTPVIASTTEQAATGELMYGNGELPDAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0065704_1002797633300005289Switchgrass RhizosphereMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0065704_1015846233300005289Switchgrass RhizosphereMTEPNNIASIVKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDVPTGSPVVISTDHAAPQKPLIASTTAQSTNGDLMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREILIQWATNSQGGA*
Ga0065704_1017091143300005289Switchgrass RhizosphereMTEPNNITSIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGASMVINTDHAVPQTPVIASNTAQADTGELMYGNGELPNAFDGEAEGFQAFAQVHGY
Ga0065705_1006580223300005294Switchgrass RhizosphereMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0065705_1015645423300005294Switchgrass RhizosphereMTQQQALPILKTEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTEAPTGMPLVINTDQAVPQTPAITSTNVQAATSQLMYGNGELPNAFEGEAEGFQAFAQVHGYIPPTREVLIQWATNS*
Ga0065705_1029079033300005294Switchgrass RhizosphereMTEPNNNTPIIRPEIVAPPSVSNLSIAQVGTGMFSVTMQVIMVVRFPTDVPLGSPIVINTDQALPQTPEIASTTVKPATGDLIYGNRELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0065705_1068467313300005294Switchgrass RhizosphereMTEPNNITSIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGASMVINTDHAVPQIPVIASNTAQADTGELMYGNGELPNAFDGEAEGFQAFAQVHGYVPPTREVLIQWATNSQGGA*
Ga0065707_1005813423300005295Switchgrass RhizosphereMTEPNNIASIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPDDVPAGSPVVISTDHAAPQKALIASTTAQSTNGDLRYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0070698_10022556423300005471Corn, Switchgrass And Miscanthus RhizosphereMTEPNNNTPIIRPEIVAPPSVSNLSIAQVGTGMFSVTMQVIMVVRFPTDVPLGSPIVINTDQALPQTPEIASNTVQPATGHLMYGNRELPNAFDGEVEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0081539_1005582433300005985Tabebuia Heterophylla RhizosphereMSEPNNSMPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPIDVPAGSPVIISTDHAVPQTPVIASTTVQAANSELMYGNGELPNAFDGEAEGFRAFVQVHGYVPPTRDVLIQWATNSQGGV*
Ga0079222_1158194013300006755Agricultural SoilMTNPNNITSIIKPEIVAPPSVSNLSVAPVGTGMFSVTMQVIMVVRFPTDIPVGSPVVLNTADDIHQTLAIASTAVQAATAELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREILIQWATNSQGGA*
Ga0075421_10022176323300006845Populus RhizosphereMTEPNNNAPIIRPEIVAPPSISNLSVAQVGTGMFSITMQVIMVVRFPTDVPVGSPVIISTDHAVPPTPVIASTTVQPATSELMYGNGELPNAFDGEAEGFRAFAQVHGYVPPTRDVLIQWATNSQGGA*
Ga0075434_10261828713300006871Populus RhizosphereMTETNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDVPAGSPVVISTDHALPSTPGIASATIQAANGELIYGNGELPNAFDGEAEGFQAFVQVHGYVPPTRDVLIQWATNSQGGA*
Ga0075429_10150264923300006880Populus RhizosphereMTEPNNMPIIKPEIVAPPSVSNLSVAQVGTGMFSVAMQVIVVVRFPTDVPAGSPVVISTDHALPSTPGIASATIQAANGELIYGNGELPNAFDGEAEGFQAFVQVHGYVPPTRDVLIQWATNSQGGA*
Ga0079218_1224995923300007004Agricultural SoilMTEPNNNAPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDVPAGAPMVISTDHAVPQTPVIASTTVQAAGELLYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0105095_1001776323300009053Freshwater SedimentMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVVMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0105106_1115772813300009078Freshwater SedimentTTSNSNLKEVIMTEPNNTLIIKPEIVAPPSVSNLSVASVGTGMFSVTMQVVMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0105091_1023444223300009146Freshwater SedimentMTKPNNDAPIIKPEIVTPPSVSNLSVAQVGTGMFSLTMQVIMVVRFPTGIPAGLPVGINTDYAVPQTPELASTTVQTATSELMYGNSELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0105091_1028921223300009146Freshwater SedimentMTEANNMPIIKPEILAPPSVSNLSVAQVGTGMFSVSMQVIMVVRFPTDSPAGSPVGIDTDYTVPQTPELASTTMQTATGELKYGNGELPSAFDGEAEGFQAFVQVHGYVPPSRDVLVQWATNSQGGA*
Ga0105091_1031042823300009146Freshwater SedimentMTKPNNDAPIIKPEIVAPPSVSNLSVAQVGTGMFSVTLQVIMVVRFPTDVPAGAPVVMSTDHAVPQRPEFASTTVQTATGALMYSNGELPNAFDGEAEGFQAFVQVHGYVPPAREVLVQWATNSQGGA*
Ga0105091_1054276313300009146Freshwater SedimentILNQSPIETTTSNSSFKEVVMTEPNNNTLIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDVPVGSPMVTNTDDFVPQTPELASTTVQTATRELKYGNGELPNAFDGEAEGFQAFVQVHGYVPPSRDILVQWATNSQGGA*
Ga0114129_1103363613300009147Populus RhizosphereVMTEPNNNAPIIRPEIVAPPSISNLSVAQVGTGMFSITMQVIMVVRFPTDVPVGSPVIISTDHAVPPTPVIASTTVQPATSELMYGNGELPNAFDGEAEGFRAFAQVHGYVPPTRDVLIQWATNSQGGA*
Ga0114129_1152803323300009147Populus RhizosphereMTEPNNITSIVKPEIVVPPSVSNLSVAQVGTGMFSVTMQVIMVVRCPVDVPTGSPVVISTDHAASQKPLIASTTAQSTTGDLMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREILIQWATNSQGGA*
Ga0114129_1184662823300009147Populus RhizosphereMTEPNNITSIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDVPSGSPIVINTDHALPQTPEIASTTVQPAIGDLMYGNGELPNAFDGEAEGFQAFVQIHGYVPPTREVLIQWATNSQGGA*
Ga0105094_1005104543300009153Freshwater SedimentSPNPDLKEVVMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVVMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0105092_1052060523300009157Freshwater SedimentMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQVFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0075423_1029525853300009162Populus RhizosphereMTEPNNMPIIKPEIVAPPSVSNLSVAQVGTGMFSVAMQVIVVVRFPTDVPAGSPVVISTDHALPSTPGIASATIQAANGELIYGNGELPNAFDGEAEGFQAFVQVYGYVPPT
Ga0105104_1078106423300009168Freshwater SedimentMTGPNNSLIIKPEIVAPPSVSNLSVAQVGTGMFSVAMQLIMVVRFPTDALADSPVVVNTDQAVPQTPEFASTTVQATGELIYGNGELPNGLDGETEGFQAFV
Ga0115028_1057863023300009179WetlandMTQQQDLPILKTEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTEIPTGTPLVINTDQAIPQTPAITSTTVQAATSQLMYGNGELPNAFEGEAEGFQAFAQVHGYIPPTREVLIQWATNSQGGA*
Ga0105249_1191545213300009553Switchgrass RhizosphereMTEPNNITSIIKPEIIAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDVPAGSPVAISTDHAVPQTPVIASTTAEAATGELMYGNGEFPNAFEGEAEGFQAFVQVHGYVPPTRE
Ga0126312_1102657213300010041Serpentine SoilMTEPNNNAPIIRPEIVAPPSVSNLSVAQVGTGMFSITMQVIMVVRFPTDVPVGSPVIISTDHAVPQTPVIASTTVQAATSELMYGNGELPNAFDGEAEGFQAFVQVHGYIPSTRDILIQWAANSQGGA*
Ga0126310_1044724813300010044Serpentine SoilMTEPNNITSIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDLPTGSQVVINTNHALPPTPVITLTTVPAATGELIYGNRELPNAFDGEAEGFQAFAQVHGYVPPTREILVQWATNSQGGV*
Ga0134127_1174891223300010399Terrestrial SoilMEARRQADFPRSRSSRRRALNQASIQSVTSNSNLKEVVMTEPNNNTPIIKPEIVAPPSVSNLSIAQVGTGMFSVTMQVIMVVRFPTDVPLGSPIVINTDQALPQTPEIASNTVKPATGHLMYGNRELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0137356_107100413300011402SoilVAPPSVSNLSVAQVGAGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREMLIQWATNSQGGA*
Ga0137333_1000311173300011413SoilMHSKPIPYSINFIKPNLKEVVMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREMLIQWATNSQGGA*
Ga0137452_104133523300011441SoilMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGAPMVISADNAVPQTPVIASTTVQAATGKLMYGNCELPNAFEGEAEGFQAFVQVHGYVPPTREMLIQWATNSQGGA*
Ga0120192_1005493823300012021TerrestrialMTEPNNNTPIIKPEIVAPPSVSNLSIAQVGTGMFSVTMQVIMVVRFPTDVPTDTPVVISTDHAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0137421_114504423300012039SoilMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0137353_103293023300012157SoilSNLAVVQVGTGMFSITMQVIMVVRFPTDVPAGLPVVINANHVAPQTPEIASTTVQPATGELMYGNGELPNAFDGETDGFQAFVQVHGYVPPTRDVLIQWATNSQGGA*
Ga0137336_102371223300012161SoilMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGAQMVISADNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0137352_109138723300012164SoilAPPSVSNLSVAQVGTGMFSVTMQVIMVVLFPTDAPAGVPMVISTENAVPQTPVIASTTEQAATGELMYGNGELPNAFDGEADGFQAFMQVHGYVPPTREMLIQWATNSQGGA*
Ga0137350_102232113300012166SoilKPIPYSINFIKPNLKEVVMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREMLIQWATNSQGGA*
Ga0137334_100475243300012179SoilMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDVPAGSPVVINTDQAVPLTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREMLIQWATNSQGGA*
Ga0137374_1021254213300012204Vadose Zone SoilPIQSISSNPNLKEVVMTQTNNNTPIIKPEIVAPPSVSNLSVVPVGTGMFSVTMQVIMVVRFPTDLPTGSPVVINTDHALPPTPVITSTTVQTATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0137374_1032127023300012204Vadose Zone SoilMTEPNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGAPMVISADSAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0137459_101591133300012228SoilMTEPNNNTLIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREMLIQWATNSQGGA*
Ga0137372_1061772913300012350Vadose Zone SoilMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGAPMVISADNAVPQTPVIASTTAQAATGELTYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0137367_1009098543300012353Vadose Zone SoilMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDVPAGAPMVISADNAVPQTPVIASNTAQADTGELMYGNGELPNAFDGEAEGFQAFAQVHGYVPPTREVLVQWATNSQGGA*
Ga0137367_1014658733300012353Vadose Zone SoilMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGAPMVISADNAIPQTPVIASTTAQAATGELMYGNGELPNAFDGEVEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0137367_1058905923300012353Vadose Zone SoilMTEPNNITSIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDLPTGSLVVINTDHALPPTPVITSTTVQTATGELTYGNGELPNAFDGEAEGFEAFAQVHGYVPPTREILIQWATNSQGGV*
Ga0137366_1011815133300012354Vadose Zone SoilMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGAPMVISADNAIPQTPVIASTTAQAATGELMYGNDELPNAFDGEVEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0137369_1011854253300012355Vadose Zone SoilMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDVPAGAPMVISADNAVPQTPVIASNTAQADTGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWVTNSQGGA*
Ga0137369_1016403643300012355Vadose Zone SoilMTQTNNNTPIIKPEIVAPPSVSNLSVVPVGTGMFSVTMQVIMVVRFPTDLPTGSPVVINTDHALPPTPVITSTTVQTATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVL
Ga0137371_1078550123300012356Vadose Zone SoilMTQTNSNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGAPMVISADNAAPQTPVIASTTAQAATGELMYGNGELPNAFDGEVEGFQAFMQVHGYVPPSREVLIQWATNSQGGV*
Ga0137375_1016324613300012360Vadose Zone SoilMTQTNNNTPIIKPEIVAPPSVSNLSVVPVGTGMFSVTMQVIMVVRFPTDLPTGSPVVINTDHALPPTPVITSTTVQTATGELTYGNGELPNAFDGDAEGFQRFTQVHGYVPPTREFFILWATNSKEVA
Ga0137375_1082547233300012360Vadose Zone SoilMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDSPAGAPMVISADNAVPQTPVIASTTARAATGELMYGNGELPNAFDGEAEGFQAFVQVH
Ga0137373_1120813113300012532Vadose Zone SoilMTQTNNNTPIIKPEIVAPPSVSNLSVVPVGTGMFSVTMQVIMVVRFPTDLPTGSPVVINTDHALPPTPVITSTTVQTATGELTYGNGELPNAFDGEAEGFEAFAQVHGYVPPTREILIQWATNSQGGV*
Ga0137341_103592423300012676SoilMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGAPVVISADNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0120188_100350523300013760TerrestrialALSLLATTCSEPIPYSYNYVKFQLKEVVMTEPNNNAPIIKPEIVAPPSVSNLSVAPVGTGMFSVTMQVIMVVRFPTDIPVGSPVVLNTADAIPQTPSIASTAVQAATAELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTRDVLIQWATNSQGGA*
Ga0075320_102502123300014255Natural And Restored WetlandsMTEPNNRPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDIPAGSLVVTNTDYAVPQTLELASTTLQTATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTRDVLVQWATNSQGGA*
Ga0075323_115144323300014301Natural And Restored WetlandsMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDTPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGGA*
Ga0180068_100188023300014864SoilMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFEAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0180076_102655433300014867SoilMTEPNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGATMVISADNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREMLIQWATNSQGGA*
Ga0180066_104734323300014873SoilMTEPNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDIPAGSPVVINADHAVPQTPQIASTTVQATGELMYGNGELPNAFDGEAEGFEAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0180083_106038623300014875SoilMTEPNKMSIIKPEIVAPPSVSNLSVAQVGAGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA*
Ga0180074_100870613300014877SoilMHSKPIPYSINFIKPNLKEVVMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDIPATSPVAINADHAVPQTPQIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREMLIQ
Ga0180074_107869023300014877SoilMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGAPMVISADNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREMLIQWATNSQGGA*
Ga0180082_111579823300014880SoilMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPT
Ga0180094_110035523300014881SoilMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQ
Ga0180104_115433523300014884SoilMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGMQMVINADHDVPKAPEIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREMLIQWATNSQGGA*
Ga0180063_106353623300014885SoilMHSKPIPYSINFIKPNLKEVVMTQTNNNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVRSTREVLIQWATNSQGGA*
Ga0180085_100740843300015259SoilNTPIIRPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPIDVPAGSSVVINADHAVPQTPVIASTTVQAIGELMYGNGELPNAFDGEAEGFQAFMQVHGYAPPTREMLIQWATNSQGGA*
Ga0132257_10346042013300015373Arabidopsis RhizosphereVAQVGTGMFSVTMQVIMVVRFPIDVPAGSPVVITADHVLTTTPVIASNTVQAAAGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA*
Ga0184626_1027066113300018053Groundwater SedimentMTEPNNASIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGMQMAINTDHAVAQTPQIASTTVQATGELIYGNGELPNAFDGEAEGFQAFVQVHSYVPPTRDVL
Ga0184615_1072890313300018059Groundwater SedimentEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPADVPVVISTDHAVPQTPVIASNTAQADTGELMYGNGELPNAFDGEAEGFQAFAQVHGYVPPTREVLIQWATNSQGGA
Ga0184632_1029082923300018075Groundwater SedimentMTEPNNASIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDIPATSPVVINADHTVPQTRHIAATTVHAATGELMYSNGEFPDAFDGETEGFQAFVQVHGYVPPTREVLVQWATNSQGGA
Ga0184629_1026895523300018084Groundwater SedimentMTQPNNNMPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDIPATSPVAINADHAVPQTPQIASTTVQATSGELMYGNGELPNAFDGEADGFQAFVQVNDYAPPTREVLIQWATNSQGGA
Ga0184629_1032858913300018084Groundwater SedimentPNNTSIIKPEIVAPPSVSNLSVAQVGAGMFSVTMQVIMVVRFPTDAPAGAPMVISADNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA
Ga0190264_1123050823300019377SoilMTEPNNNAPIIRPEIVAPPSVSNLSVAQVGTGMFSITMQVIMVVRFPTDVPVGSPVIISTDHAVPPTPVIASTTVQPATSELMYGDGELPNAFDGEAEGFQAFVQVHGYVPPTRDVLIQWAANSQGGA
Ga0210377_10000193613300021090Groundwater SedimentMTQTNNNTPIIRPEIVAPPSVLNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTDNAVPQTPVIASTTVQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREMLIQWATNSQGGA
Ga0210377_1002494723300021090Groundwater SedimentMTEPINMPIIKPEIIAPPSVSNLSVAQVGAGMFSVTMQVIMVVRFPTDVPAGSPAVINTNHTAPQTPEIASTTVQPATGELMYSNGELPNAFDGETGGFQAFVQVHGYVPPTRDVLIQWATNSQGGA
Ga0210377_1052457123300021090Groundwater SedimentVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDIPATSPIAINADHTVPQTPQIASTTVRAATGELMYSNGEFPNAFDGEAEGFQAFVQVHGYVPPTREVLVQWATNSQGGA
Ga0209431_1067301823300025313SoilMTEPNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTENAVPQTPVIASTTEQAATGELMYGNGELPDAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGA
Ga0207676_1060368623300026095Switchgrass RhizosphereMTQQQALPILKTEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTEAPTGMPLVINTDQAVPQTPAITSTNVQAATSQLMYGNGELPNAFEGEAEGFQAFAQVHGYIPPTREVLIQWATNS
Ga0209878_101212433300027163Groundwater SandMTEPNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPTDAPAGVPMVISTENAVPQTPVIASTTEQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA
Ga0209077_104708833300027675Freshwater SedimentMTEANNMPIIKPEILAPPSVSNLSVAQVGTGMFSVSMQVIMVVRFPTDSPAGSPVGIDTDYTVPQTPELASTTVQTATRELKYGNGELPNAFDGEAEGFQAFVQVHGYVPPSRDILVQWATNSQGGA
Ga0209706_1002887713300027818Freshwater SedimentMTQTNNNTPIIKPEIVAPPSVSNLSVAQVGTGMFSVTMQVVMVRFPTDAPAGVPMVISTDNAVPQTPVIASTTAQAATGELMYGNGELPNAFDGEAEGFQAFMQVHGYVPPTREVLIQWATNSQGGA
Ga0208980_1010153413300027887WetlandSVSNLSVAQVGTGMFSITMQVIMVVRFPTDVPTGTPLVINTDQAVPQTPAISSTNLQAATSQLMYGNGELPNAFEGEAEGFQAFAQVHGYIPPTRDVLIQWATNSQGGA
Ga0209382_1150908413300027909Populus RhizosphereMTEPNNNAPIIRPEIVAPPSISNLSVAQVGTGMFSITMQVIMVVRFPTDVPVGSPVIISTDHAVPPTPVIASTTVQPATSELMYGNGELPNAFDGEAEGFRAFAQVHGYVPPTRDVLIQWATNSQGGA
Ga0119857_100006283300029304Anaerobic BioreactorMTQPNNNMPIIRPEIVAPPSVSNLSVAPVGTGMFSVTMQVIMVVRFPTDVQSGSQVVINTDHVVPQTPAETSTAMQTTIRELRYGDGETPNAFEGEIEGFQAFVQVHGYVPPTREVLIQWATSSQGGA
Ga0302046_1128425423300030620SoilPPSVSNLSVAPVGTGMFSVTMQVIMVVRFPTDVQAGPPLVINADHVVSPPPVNTSATVQNAIGELKYGDGEYPDAFEGETEGFQAFVQVHGYVPATREVLIQWAASSQGGA
Ga0214473_1002845093300031949SoilMTEPNNAPIIKPEIVAPPSVSNLSVAQVGTGIFSVTMQVIMVVRFPTDVPAGSPVVISPDHVVPQTPEITSTTVQAATGELMYGNGELPNAFDGEAEGFQAFVQVHGYVPPTREVLIQWATNSQGGV
Ga0214473_1118460323300031949SoilMTEPNNAPILKPEIVAPPSVSNLSVAQVGTGMFSVTMQVIMVVRFPVDAPAGSPMVVNTAHTVPQTPEIASTTVQAFTGELMYGNGELPNAFEGEADGFQAFVQVHGYAPPTREVLIQWATNSQGGA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.