Metagenome / Metatranscriptome Family F104886

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104886
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	78 residues
Representative Sequence	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEG
Number of Associated Samples	81
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.86 %
% of genes near scaffold ends (potentially truncated)	56.00 %
% of genes from short scaffolds (< 2000 bps)	50.00 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (29.000 % of family members)
Environment Ontology (ENVO)	Unclassified (62.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.67% β-sheet: 0.00% Coil/Unstructured: 57.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF04185	Phosphoesterase	12.00
PF13360	PQQ_2	2.00
PF07676	PD40	1.00
PF01186	Lysyl_oxidase	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	12.00

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.00 %
Unclassified	root	N/A	44.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.00 %
Unclassified	root	N/A	44.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.00 %
Unclassified	root	N/A	44.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	52.00 %
Unclassified	root	N/A	44.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	52.00 %
Unclassified	root	N/A	44.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	52.00 %
Unclassified	root	N/A	44.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	52.00 %
Unclassified	root	N/A	44.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10007990	All Organisms → cellular organisms → Bacteria	3429	Open in IMG/M
3300002915\|JGI25387J43893_1006627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1543	Open in IMG/M
3300005175\|Ga0066673_10417601	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	785	Open in IMG/M
3300005180\|Ga0066685_10301467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1109	Open in IMG/M
3300005186\|Ga0066676_10588593	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	754	Open in IMG/M
3300005540\|Ga0066697_10522020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	670	Open in IMG/M
3300005540\|Ga0066697_10526615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	666	Open in IMG/M
3300005540\|Ga0066697_10672722	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	568	Open in IMG/M
3300005552\|Ga0066701_10977317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300005553\|Ga0066695_10326629	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	964	Open in IMG/M
3300006034\|Ga0066656_10510085	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	784	Open in IMG/M
3300006046\|Ga0066652_100453006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1181	Open in IMG/M
3300006791\|Ga0066653_10604245	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300006797\|Ga0066659_11603375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300006804\|Ga0079221_10698877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	706	Open in IMG/M
3300006903\|Ga0075426_10206784	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1423	Open in IMG/M
3300009038\|Ga0099829_10402162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1132	Open in IMG/M
3300009089\|Ga0099828_10137045	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2153	Open in IMG/M
3300009162\|Ga0075423_10031342	All Organisms → cellular organisms → Bacteria	5384	Open in IMG/M
3300010301\|Ga0134070_10206423	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	722	Open in IMG/M
3300010325\|Ga0134064_10011095	All Organisms → cellular organisms → Bacteria	2424	Open in IMG/M
3300010336\|Ga0134071_10278775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	836	Open in IMG/M
3300012198\|Ga0137364_11093165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	600	Open in IMG/M
3300012201\|Ga0137365_10118127	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1994	Open in IMG/M
3300012201\|Ga0137365_10396699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1018	Open in IMG/M
3300012203\|Ga0137399_10354370	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1219	Open in IMG/M
3300012203\|Ga0137399_10775992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	807	Open in IMG/M
3300012209\|Ga0137379_11587497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300012357\|Ga0137384_10805826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	759	Open in IMG/M
3300012918\|Ga0137396_10231654	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1361	Open in IMG/M
3300012930\|Ga0137407_11337488	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	681	Open in IMG/M
3300012972\|Ga0134077_10178627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	857	Open in IMG/M
3300012976\|Ga0134076_10397570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300012977\|Ga0134087_10405391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	665	Open in IMG/M
3300014154\|Ga0134075_10337453	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300015241\|Ga0137418_10099999	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2610	Open in IMG/M
3300015356\|Ga0134073_10039355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1226	Open in IMG/M
3300015358\|Ga0134089_10271048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	698	Open in IMG/M
3300017656\|Ga0134112_10177534	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300017659\|Ga0134083_10059729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1450	Open in IMG/M
3300017659\|Ga0134083_10307291	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300018431\|Ga0066655_10389303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	919	Open in IMG/M
3300018433\|Ga0066667_11584740	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300018468\|Ga0066662_12929194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300019255\|Ga0184643_1470937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300020170\|Ga0179594_10080321	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1149	Open in IMG/M
3300024330\|Ga0137417_1325665	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1345	Open in IMG/M
3300026298\|Ga0209236_1248702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	588	Open in IMG/M
3300026306\|Ga0209468_1141318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	653	Open in IMG/M
3300026324\|Ga0209470_1029667	All Organisms → cellular organisms → Bacteria	2826	Open in IMG/M
3300026328\|Ga0209802_1210960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	733	Open in IMG/M
3300027681\|Ga0208991_1185936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300027846\|Ga0209180_10398876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	780	Open in IMG/M
3300027875\|Ga0209283_10204665	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1311	Open in IMG/M
3300028536\|Ga0137415_10970605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	660	Open in IMG/M
3300031720\|Ga0307469_10266089	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1390	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.00%
Host-Associated	Host-Associated	3.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.00%
Plants	Host-Associated → Plants	3.00%
Aquatic	Environmental → Aquatic	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.00%
Freshwater	Environmental → Aquatic → Freshwater	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.00%
Loam	Environmental → Terrestrial → Soil → Loam	2.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	39.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.00%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	23.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.00%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_100079901	3300002560	Grasslands Soil	MIPHGGENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRLAAHDSAAQL
JGI25382J37095_101465531	3300002562	Grasslands Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAA
JGI25387J43893_10066273	3300002915	Grasslands Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYL
Ga0066673_104176011	3300005175	Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRW
Ga0066685_103014671	3300005180	Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAAKLIEWLKH
Ga0066676_105885931	3300005186	Soil	MIPHGVENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPTLTRGVDIDIYLTIRLRLVAHLCRWSLR
Ga0066686_110191341	3300005446	Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEG
Ga0066682_109529151	3300005450	Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLRDEHRVAAHDSAAKLIEWLKRENA
Ga0066697_105220201	3300005540	Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAAKLIEWLKHENAGRLD
Ga0066697_105266151	3300005540	Soil	VIPYGGEGLRGEPWDFRIPRTGDRDLAFRGWLLSHAEERGRSPGVAYGVDIDLYLTIRLRLVAHLCRWSLRDGEGLSEDH
Ga0066697_106727222	3300005540	Soil	VSDDLRGEPHDFRIPRTGDRDLAFRGWLLSHAEERDASVGVTHGVDIDIYLTIRLRLVAHMC
Ga0066701_109773171	3300005552	Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYL
Ga0066695_100904024	3300005553	Soil	MIPHGVENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPTLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLRE
Ga0066695_101351563	3300005553	Soil	VIPYGGEGLRGEPWDFRIPRTGDRDLAFRGWLLSHAEERGRSPGVAYGVDIDLYLTIRLRLVAHLCRWSLREGEGLSEDHRVATHDSAAQ
Ga0066695_103266293	3300005553	Soil	MIPHGGENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPTLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLRE
Ga0066661_102133761	3300005554	Soil	VIPYDGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERSAAPGVTHGVDIDLYLTIRLRLVGHLCRWLLREAEGLSEDHRVAAHDSAAELIEW
Ga0066692_100938731	3300005555	Soil	VIPYGGEGLRGEPWDFTIPRRGDRDLAFRGWLLSHAEERGRHPGVAYGVDIDLYLTIR
Ga0066656_103970701	3300006034	Soil	VIPYDGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERSAAPGVTHGVDIDLYLTIRLRLVGHLCRWLLREAEGLSEDHRVAAHDSAAELIEWLKQENAG
Ga0066656_105100852	3300006034	Soil	VIPYGGAGLRGEPWDFRIPRTGDRDLAFRGWLLSHAEERGRSPGVAYGVDIDLYLTIRLRLVAHLCRWSLRDGEGLSEDHRVATHDSAAQLIEWLKQ
Ga0066652_1004530061	3300006046	Soil	VIPYGGAGLRGEPWDFRIPRTGDRDLAFRGWLLSHAEERGRSPGVAYGVDIDLYLTIRLRLVAHLCRWSLREGEGLSEDHRVATHDSAA
Ga0066653_106042451	3300006791	Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTI
Ga0066658_102600641	3300006794	Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIR
Ga0066659_116033751	3300006797	Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVD
Ga0079221_106988772	3300006804	Agricultural Soil	MIPYGGESLRGEPQDFRIPRTGDRDLSFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLAAHLCRWSLREGEGLREEHRVAAHDSPAKLIEWLKHENA
Ga0075426_102067843	3300006903	Populus Rhizosphere	MIPYGGESLRGEPQDFRIPRTGDRDLSFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLAAHLCRWSLREGEGLREDHRVAAHDSAAKLI
Ga0099829_104021621	3300009038	Vadose Zone Soil	MIPHGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSAALTRGVDIDIYLTIRLR
Ga0099828_101370453	3300009089	Vadose Zone Soil	MIPLRGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLR
Ga0075423_100313421	3300009162	Populus Rhizosphere	MIPYGGESLRGEPQDFRIPRTGDRDLSFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLAAHLCRWSLREGEGLRE
Ga0075423_124703682	3300009162	Populus Rhizosphere	VDQLRGDPRDFRIPRTGDRDLAFRGWPLSHAEERGGSPGALRGVDIDIYMTVGLRLVGHVCQWTLEEGQGLKE
Ga0134070_102064232	3300010301	Grasslands Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAAKLIEWLKHE
Ga0134086_104534171	3300010323	Grasslands Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAAKLIEWLKHENAGRL
Ga0134064_100110953	3300010325	Grasslands Soil	VIPYDGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERSAAPGVTHGVDIDLYLTIRLRLVGHLCRWLLREAEGLSEDHRVATHD
Ga0134111_105557171	3300010329	Grasslands Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAAKLIEWLKHENA
Ga0134080_102016822	3300010333	Grasslands Soil	MIPHGGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGATRGVDIDIYLTIRLRLAAHVCRWSLQEGEGLREEHRVAAHDSAAKVIEWLKQE
Ga0134063_107412251	3300010335	Grasslands Soil	VIPYGGENLRGEPQDYRIPRTGDRDLAFRGWLLSHAEERRAAPGVTHGVDIDLYLTIRLRLVAHLCRWLLREAEGLSEDHRVVAHDSAAELIEWLKQENAGR
Ga0134071_102787753	3300010336	Grasslands Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAH
Ga0134062_100056145	3300010337	Grasslands Soil	VIPYDGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERSAAPGVTHGVDIDLYLTIRLRLVGHLCRWLLREAEGLSEDHRVAAHDSAAELIEWLKQENAGRL
Ga0134062_100252871	3300010337	Grasslands Soil	MIPHGVENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPTLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRLAAHD
Ga0137364_110931651	3300012198	Vadose Zone Soil	MIPHGGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGATRGVDIDIYLTIRLRLAAHVCRWSLQEGEGLREEH
Ga0137383_106653662	3300012199	Vadose Zone Soil	MIPHGGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGATRGVDIDIYLTIRLRLAAHVCRWSLQEG
Ga0137383_113233071	3300012199	Vadose Zone Soil	MIPHGGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGATRGVDIDIYLTIRLRLAA
Ga0137365_101181274	3300012201	Vadose Zone Soil	MIPHGGETLRGEPQDFLIPRTGDRDLAFRGWLLSHAEERGGSPGATRGVDIDIYLT
Ga0137365_103966993	3300012201	Vadose Zone Soil	MIPHGGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGVTRGVDIDIYLTIRLRLAAHVCRWSLQEGEGLREEHRVAAHDSAAK
Ga0137399_103543701	3300012203	Vadose Zone Soil	MIQGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLREGQGLREEHR
Ga0137399_107759921	3300012203	Vadose Zone Soil	MIPHGGENLRGEPLDFRIPRTADRDLAFRGWLLSHAEERGGSAALTRGVDIDIYLTIRLRLVA
Ga0137379_115874972	3300012209	Vadose Zone Soil	MIQGGENLRGEPLDFRIPHTGDRDLAFRGWLLSHAEERGGSPALTRGVD
Ga0137377_114666851	3300012211	Vadose Zone Soil	VIPYDGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERSAAPAVTHGVDIDLYLTIRLRLVGHLCRWLLREAEGLSEDHRVAA
Ga0137387_105165141	3300012349	Vadose Zone Soil	VIPYGGESLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERSAAPGVTHGVDIDLYLTIRLRLVAHLCRWLLREAEGLSEDHRVAAHDSAAELIEWLKQENAGRLD
Ga0137369_103380481	3300012355	Vadose Zone Soil	MIPHGGENLRGEPQDFRIPRTGDRDLALRGWLLSHAEERGGSAALTRGIDIDLYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAAKVIAW
Ga0137371_104660901	3300012356	Vadose Zone Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLV
Ga0137371_104966931	3300012356	Vadose Zone Soil	MIPHGGETLRGEPQDFLIPRTGDRDLAFRGWLLSHAEERGGSPGATRGVDIDIYLTIRLRLAAHVCRWSLQEGEGLREEHRV
Ga0137384_108058261	3300012357	Vadose Zone Soil	MIPHGGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGATRGVDIDIYLTIRLRLAAHVCRWSLQEGEGLREEHRVAAHDSA
Ga0137385_115611182	3300012359	Vadose Zone Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSSGLTRGVDIDIYLTIRLRLVAHLCRWSWREGAGLREEHRVA
Ga0137360_100683874	3300012361	Vadose Zone Soil	MIQGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLC
Ga0137396_102316543	3300012918	Vadose Zone Soil	MIPHGGENLSGEPLDFRIPRTADRDLAFRGWLLSHAEERGGSAALTRGVDI
Ga0137416_108858212	3300012927	Vadose Zone Soil	MIPLGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIR
Ga0137407_113374882	3300012930	Vadose Zone Soil	MTPDVADRLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSAALTYGLDIDIYLTIRLRLAGHLCHWSLREGQGLREEHRVAVHDSAAELLGWLKQ
Ga0134077_101786272	3300012972	Grasslands Soil	MIPLGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLRDGGGLREEHRVAVHDSAARLLDWLKQESSGRL
Ga0134077_105420341	3300012972	Grasslands Soil	MIPHGGENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLARGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEH
Ga0134076_103975702	3300012976	Grasslands Soil	MIPYGGESLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLARGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEH
Ga0134087_101832461	3300012977	Grasslands Soil	VSDDLRGEPHDFRIPRTGDRDLAFRGWLLSHAEERDASVGVTHGVDIDIYLTIRLRLVAHMCRWSLRERGGR
Ga0134087_104053912	3300012977	Grasslands Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHD
Ga0134075_103374531	3300014154	Grasslands Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAAKLIGWLKHEN
Ga0137420_12983831	3300015054	Vadose Zone Soil	MIPQGGENLRGEPLDFRIPRAGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLRDGRGPER
Ga0137418_100988774	3300015241	Vadose Zone Soil	MIPQGGENLRGEPLDFRIPRAGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWS
Ga0137418_100999994	3300015241	Vadose Zone Soil	MIGHGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGPATLTRGVDIDIYLTIRLRLVAHLCRWS
Ga0134073_100393553	3300015356	Grasslands Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAAKL
Ga0134072_101693472	3300015357	Grasslands Soil	VIPYDGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERSAAPGVTHGVDIDLYLTIRLRLVGHLCRWLLREAEGLSEDHRVAAHDSAAELIEWLK
Ga0134089_102710481	3300015358	Grasslands Soil	MIPLGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLRDGEGLREE
Ga0134085_102503952	3300015359	Grasslands Soil	VIPYDGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERSAAPGVTHGVDIDLYLTIRLRLVAHLCRWLLREAEGLSEDHRVVAHDSAAELIEWLK
Ga0134112_101775343	3300017656	Grasslands Soil	MIPHGGENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYL
Ga0134074_13470271	3300017657	Grasslands Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRVAAHDSAAKLIEW
Ga0134083_100597293	3300017659	Grasslands Soil	VTRETDDLRAEPRDFRIPRTGDRDLAFRGWLLSHAEERSASPGLTQGVDIDIYLTIRLRLVTHLCRWSLRDGAGLREDHRVAAHDTA
Ga0134083_103072912	3300017659	Grasslands Soil	MIPHGGENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYVTIRLRLVAHLCRWSLQ
Ga0066655_103893032	3300018431	Grasslands Soil	VIPYGGEGLRGEPWDFKIPRTGDRDLAFRGWLLSHAEERGRHPGVAYGVDIDLYLTIRLRLVAHLCRWSLREGEG
Ga0066667_108644131	3300018433	Grasslands Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHL
Ga0066667_115847402	3300018433	Grasslands Soil	MIPHGGENLRGEPQDFRIPRMGDRDLAFRGWLLSHAEERDDSPPLTRGVDIDIYLTIRLRLVAH
Ga0066662_129291941	3300018468	Grasslands Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIR
Ga0066669_115500442	3300018482	Grasslands Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRW
Ga0184643_14709372	3300019255	Groundwater Sediment	MIQGGENVRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDID
Ga0179594_100803211	3300020170	Vadose Zone Soil	MIPHGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERDGSAALTRGVDIDIYLTIRLRLVAHLCRWSLR
Ga0137417_13256651	3300024330	Vadose Zone Soil	MIPLGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLRDAEG
Ga0209236_12487021	3300026298	Grasslands Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRL
Ga0209238_10552543	3300026301	Grasslands Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGL
Ga0209468_11413181	3300026306	Soil	VIPYGGEGLRGEPWDFRIPRTGDRDLAFRGWLLSHAEERGRSPGVAYGVDIDLYLTIRL
Ga0209468_11471781	3300026306	Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLC
Ga0209470_10296674	3300026324	Soil	MIPYHGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREG
Ga0209802_11322881	3300026328	Soil	MIPHGGENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDI
Ga0209802_12109602	3300026328	Soil	VNPYGGAGLRGEPWDFRIPRTGDRDLAFRGWLLSHAEERGRSPGVAYGVDIDLYLTIRLRLVAHLCRWS
Ga0209375_10080231	3300026329	Soil	VIPYDGENLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERSAAPGVTHGVDIDLYLTIRLRLVGHLCRWLLREAEGLSEDHRVAAHDSAAELIEWLKQENAGRLDA
Ga0209375_13036602	3300026329	Soil	MIPYGGEGLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLRDEHRVAAHDSAAKLIEWLKRENAGS
Ga0209159_11175483	3300026343	Soil	MIPHGGENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLR
Ga0209690_10366531	3300026524	Soil	MIPHGGENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLREGEGLREEHRLAAHDSAAQ
Ga0209056_106037502	3300026538	Soil	MIPHGGENLRGEPRDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWALREGEGLREEH
Ga0208991_11859361	3300027681	Forest Soil	MGVLPHGGDNLRGDPWDFRIPRTGDRDLAFRGWLLSHAEERDASAGVTYGVDIDLYLTIRLRLVSHLCRWSLREGEGLTED
Ga0209180_103988761	3300027846	Vadose Zone Soil	MIPLGGENLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLRDAEGLR
Ga0209283_102046651	3300027875	Vadose Zone Soil	MIPYGGESLRGEPQDFRIPRTGDRDLAFRGWLLSHAEERGGSPGLTRGLDIDIYLTIRLRLVAHLCR
Ga0137415_109706051	3300028536	Vadose Zone Soil	MIPQGGENLRGEPLDFRIPRAGDRDLAFRGWLLSHAEERGGSPALTRGVDIDIYLTIRLRLVAHLCRWSLR
Ga0307469_102660893	3300031720	Hardwood Forest Soil	MTPDAADRLRGEPLDFRIPRTGDRDLAFRGWLLSHAEERDGSAALTRGLDIDIYLTIRLRLVAHLCRWSLREGQGLSEEHRVAVHDSAAGLLEWLKQEN
Ga0307472_1000663015	3300032205	Hardwood Forest Soil	VDQLRGDPRDFRIPRTGDRDLAFRGWPLSHAEERGGSPGALRGVDIDIYMTVGLRLVGHVCQWTLEEGQGLREEHRVAVHDTAPELVRWLKEDNAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104886

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences