NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104884

Metagenome Family F104884

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104884
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 60 residues
Representative Sequence EARSKSEFERQMAAAGIRQNIATRAAMLQQAQQAGLGMGLTAAQQAGGALTSQYQYQ
Number of Associated Samples 84
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(68.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(82.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 63.53%    β-sheet: 0.00%    Coil/Unstructured: 36.47%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF03237Terminase_6N 2.00
PF00856SET 1.00
PF02653BPD_transp_2 1.00



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous20.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine16.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine13.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater13.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh7.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater5.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.00%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater3.00%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil3.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake2.00%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor2.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.00%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.00%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water1.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.00%
Volcanic Co2 SeepEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.00%
Marine Benthic Sponge Stylissa Massa AssociatedHost-Associated → Porifera → Unclassified → Unclassified → Unclassified → Marine Benthic Sponge Stylissa Massa Associated1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300005074Marine benthic sponge Stylissa massa associated microbial communities from Guam, USAHost-AssociatedOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007144Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'control', waterEBic1EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300009794Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245EnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300012000Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007AEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300014720 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35mEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017734Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)EnvironmentalOpen in IMG/M
3300017737Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020220Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100mEnvironmentalOpen in IMG/M
3300020239Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555909-ERR598959)EnvironmentalOpen in IMG/M
3300020316Marine microbial communities from Tara Oceans - TARA_A100001234 (ERX555946-ERR599134)EnvironmentalOpen in IMG/M
3300020325Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX556073-ERR598966)EnvironmentalOpen in IMG/M
3300020365Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020411Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300020417Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020446Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023117Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaGEnvironmentalOpen in IMG/M
3300023172Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaGEnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027683Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029293Marine harbor viral communities from the Indian Ocean - SCH2EnvironmentalOpen in IMG/M
3300029301Marine harbor viral communities from the Indian Ocean - SRH1EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033978Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034120Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25132J35274_100619613300002483MarineEFERNMAAAGIRQNIATRAAMIQKAQQAGLSAGLTAAEQAGRALTQQYQYQ*
JGI25132J35274_102977213300002483MarineFERNMAAAGIRQNIATRAAMIQKAQQAGLSAGLTAAEQAGRALTQQYQYQ*
JGI25132J35274_105782113300002483MarineAGIRQNIATRADMIKAAQQAGLRAGLDAASQSARALTQQYQYQ*
Ga0068511_104438113300005057Marine WaterIMEASEARSKKEFERNMAAAGIRQNIATRAEMQRAAQQAGLQAGLTGLQQAGAAATRQYQYQ*
Ga0070431_117964923300005074Marine Benthic Sponge Stylissa Massa AssociatedLRTLLPEIEAAAEARSKKEFERQMAGAGIRQNIQTRAAMQQAAQTAGLQAGIGALQQAGGALTRQYQYQ*
Ga0068876_1015050543300005527Freshwater LakeQMAAAGIRQNIATAANMLERSQQAAQQMGQTAAQQMGNALTSQYQYS*
Ga0098055_114768913300006793MarineRLELLKTAQTQRDVLRTLLPEIEAASEARSKKEMERQMAAAGIRQNIKTRAAMQERAQTAGLEAGLDALQKAGGALTSQYQYQ*
Ga0070749_1020945013300006802AqueousIATRAQMLQNAQLAGLGMGATAAQQAGGALTAQYQYQ*
Ga0070754_1029878123300006810AqueousARQMAAAGIRQNIATRAQMLQNAQLAGLGMGATAAQQAGGALTAQYQYQ*
Ga0070746_1015710833300006919AqueousSVLGPEGMGRRLEQLKSAETQRDAMRLLLPEIYKASEARSKSEFERNMAAAGIRQNIATRAAMLQAAQQAGLGMGMTAAQQAGGALTSQYQYQ*
Ga0101670_100548613300007144Volcanic Co2 SeepRSKKELERQMAAAGIRQNIKTRAAMQERAQTAGLEAGLGALQQAGGALTSQYQYQ*
Ga0075460_1014032613300007234AqueousIRQNIATRAAMQQAAQAAGLKAGLGAMQQAGDALTRQYQYQ*
Ga0099851_116995313300007538AqueousERNMAAAGIRQNIATRAAMLQAAQQAGLGMGMTAAQQAGGALTSQYQYQ*
Ga0099849_104533413300007539AqueousEATKKSDFERQAAMKGIAQNIKTRAQMLQNAQIAGLEMGGTAAQQAGAALTNLYQYQ*
Ga0099848_128500723300007541AqueousEARSKTEFQRQMAAAGIRQNISTAANMLERSQQAAQQMGLNAAGQMGSALTSQYQYQ*
Ga0099848_130436513300007541AqueousFQRQMAAAGIRQNISTAANMLERSQQAAQQTGLNAASQMGSALTSQYQYS*
Ga0099846_100442473300007542AqueousGMGRRLEQLKSAETARDAMRLLNPEIYAAGEAREKQNFARQMAAAGIRQNIATRAAMLQNAQLAGLNMGATALQQAGNALTSHFQYQ*
Ga0099850_115105823300007960AqueousYKASEARSKSEFERNMAAAGIRQNIATRAAMLQAAQQAGLGMGMTAAQQAGGALTSQYQYQ*
Ga0099850_140298513300007960AqueousPLDIYGPDGMARRGETVKTAEAQRDAMRLLLPEIFQASEGRSKAEFERQMAAAGIRQNIATRAQMLQAAQQAGLNLGLTAAQQAGSALTSQYQYQ*
Ga0105102_1084641323300009165Freshwater SedimentQAEARSKTEMQRQLAGAGVRQNIATAANMLERSQQAAQQMGANAASQMGSALTQQYQYS*
Ga0115011_1014323433300009593MarineKDDFARNMAAAGIRQNILTNAQMLQAAQAAGLGMGLTGAQQAGQALVNQYSYS*
Ga0115012_1060838413300009790MarineMAAAGIRQNIATNATMLQNAQLAGLNMGQTGAQQVGAALTGAYNYS*
Ga0105189_100277813300009794Marine OceanicAKKDEMERQMAAAGIRQNIATNAQMLANAQLAGLNMGQTGAQQVGAALTGAYNYS*
Ga0129345_111330823300010297Freshwater To Marine Saline GradientLETVKSAEAQRDAMRMLLPEVYKATEATKKSDFERQAAMKGIAQNIATRAAMLQNAQAAGLQMGGTAAQQAGQALTQLYQYQ*
Ga0129345_131181713300010297Freshwater To Marine Saline GradientRQNIATRAAMLQAAQQAGLGMGQTAAAQAGGALTSQYQYQ*
Ga0129351_123785013300010300Freshwater To Marine Saline GradientAMRMLLPEVYKATEATKKSDFERQAAMKGIAQNIKTRAQMLQNAQIAGLEMGGTAAQQAGAALTNLYQYQ*
Ga0136656_107687313300010318Freshwater To Marine Saline GradientAEAQRDAMRMLLPEVYKATEATKKSDFERQAAMKGIAQNIKTRAQMLQNAQIAGLEMGGTAAQQAGAALTNLYQYQ*
Ga0129336_1020210013300010370Freshwater To Marine Saline GradientRSKTEFQRQMAAAGIRQNIATAANMLERSQQAAQQMGQTAAMQMGNALTNQYQYS*
Ga0119951_112222523300012000FreshwaterKSEMQRQLTAAGVRQNIATAANMLERSQQAAQQMGVNAASQAGAALTSQYQYS*
Ga0163180_1030961413300012952SeawaterKQNILTNAAMLQAAQAAGLGMGLQGATQAGQALTQQYNY*
Ga0163179_1057201523300012953SeawaterIRQNIATNAQMLANAQLAGLNMGQTGAQQVGAALTGAYNYS*
Ga0163179_1151612123300012953SeawaterDEFERQMAAAGIRQNIATNATMLQNAQLAGLNMGQTGAQQVGAALTGAYNYS*
(restricted) Ga0172372_1056198223300013132FreshwaterKASEARSKTEFQRQMAAAGVRQNIMTAANMLERSQQAAQQMGLTAAQQAGSALTQQYQYS
(restricted) Ga0172376_1047125313300014720FreshwaterASEARSKTEFQRQMAAAGVRQNIMTAANMLERSQQAAQQMGLTAAQQAGSALTQQYQYS*
Ga0181391_108196913300017713SeawaterRAETLKTAQTQRDVLRTLLPEIEAAAEARSKKEFERQMAAKGIRTNIDTRAAMQQRAQQAGLQAGLGALSQAGGALTSQYQYQ
Ga0181383_118260023300017720SeawaterGEAIAQNILTNARMLEAAQAAGLGMGLTGAQQAGQALIQQYNYV
Ga0181381_107405523300017726SeawaterQRDVLRTLLPEIEAASEARSKKEMERQMAAAGIRQNIKTRAAMQERAQTAGLEAGLDALQKAGGALTSQYQYQ
Ga0181381_112550913300017726SeawaterPLDVLGPAGMGQRLDTLKTAQTQRDVLRTLLPEIEAAAEARSKKEFERQMAAKGIRTNIDTRAAMQQRAQQAGLQAGLGALSQAGGALTSQYQYQ
Ga0181417_109899713300017730SeawaterAGIRQNIATNAAMLQAAQAAGLGMGLTGAQQAGQALIQQYNYV
Ga0187222_106906423300017734SeawaterGQRLDTLKTAQTQRDVLRTLLPEIEAAAEARSKKEFERQMAAKGIRTNIDTRAAMQQRAQQAGLQAGLGALSQAGGALTSQYQYQ
Ga0187218_108556023300017737SeawaterVYGIPGMGQRAETLKTAQTQRDVLRTLLPEIEAAAEARSKKEFERQMAAKGIRTNIDTRAAMQQRAQQAGLQAGLGALSQAGGALTSQYQYQ
Ga0181418_109381123300017740SeawaterEARSKKEFERQMAAKGIRTNIDTRAAMQQRAQQAGLQAGLGALSQAGGALTSQYQYQ
Ga0181427_116655923300017745SeawaterKKDDFERNMAAAGIRQNIATNAAMLQAAQAAGLGMGLTGAQQAGQALIQQYNYV
Ga0181393_103698813300017748SeawaterLGPSGMGRRLELLKTAQTQRDVLRTLLPEIEAASEARSKKEMERQMAAAGIRQNIKTRAAMQERAQTAGLEAGLDALQKAGGALTSQYQYQ
Ga0181393_108770623300017748SeawaterGMGQRAETLKTAQTQRDVLRTLLPEIEAAAEARSKKEFERQMAAKGIRTNIDTRAAMQQRAQQAGLQAGLGALSQAGGALTSQYQYQ
Ga0181414_105425013300017759SeawaterAEARSKKEFERQMAAKGIRTNIDTRAAMQQRAQQAGLQAGLGALSQAGGALTSQYQYQ
Ga0187220_115691723300017768SeawaterAKGIRTNIDTRAAMQQRAQQAGLQAGLGALSQAGGALTSQYQYQ
Ga0181583_1050991913300017952Salt MarshMAAAGIRQNIATRAAMLQAAQQAGLGMGMTAAQQAGGALTSQYQYQ
Ga0181583_1072304013300017952Salt MarshRRLEQLKSAETQRDAMRLLLPEIYKASEARSKSEFERNMAAAGIRQNIATRAAMLQAAQQAGLGMGMTAAQQAGGALTSQYQYQ
Ga0181580_1006877853300017956Salt MarshEATKKSDFERQAAMKGIAQNIATRAAMLQNAQAAGLQMGGTAAQQAGQALTQLYQYQ
Ga0181589_1072186223300017964Salt MarshMGQRLQTLKDAQTQRDVFRTLMPEVVGVREATAKKDMERQMAAAGIRQNIATRAAMQQRAQQAGLQAGLGALQQAGTALTQQYQYQ
Ga0181592_1039497133300018421Salt MarshEARSKSEFERQMAAAGIRQNIATRAAMLQQAQQAGLGMGLTAAQQAGGALTSQYQYQ
Ga0194119_1087843713300020220Freshwater LakeMMRNLAAANIRQNIATGAQQLLGAQQSAQRMGETAAAQAGSALTQQYQYT
Ga0211501_104889923300020239MarineIEAAAEARSKKELERQMAAAGIRQNIKTRAAMQEAAQTAGLQAGLGALSQAGGALTSQYQYQ
Ga0211487_108818213300020316MarineAQTQRDVLRTLLPEIEAAAEARSKKELERQMAAAGIRQNIKTRAAMQEAAQTAGLQAGLGALSQAGGALTSQYQYQ
Ga0211507_108159713300020325MarineAETMRDAMRLLNPEILAASEARSKKEFERNMAAAGIRQNIATRANMIQNAQRAGLQSGMTAAQQAGAALTNQYQYT
Ga0211506_105061133300020365MarineSKKEFERNMAAAGIRQNIATRANMIQNAQRAGLQSGMTAAQQAGAALTNQYQYT
Ga0211678_1001108983300020388MarineDVLGPAGMGQRLQTLKDAQTQRDVFRTLMPEVMGVREATAKKDMERNMAAAGIRQNIETRAAMQRAAQTAGLQAGLGAMRQAGDALTQKYQYQ
Ga0211532_1014359213300020403MarineTLLPEIEAAAEARSKKEFERQMAAKGIRTNIDTRAAMQRAAQGAGLQAGLGALQQAGGALTSQYQYQ
Ga0211532_1033961923300020403MarineAETMRDAMRLLNPEILAAAEARSKKEFERNMAAAGIRQNIATRAAMIQNAQRAGLNTGMKAAEQAGAALTGQYQYQ
Ga0211587_1025103613300020411MarineAKKDEFERQMAAAGIRQNIATNAQMLANAQLAGLNMGQTGAQQVGAALTGAYNYS
Ga0211523_1014346433300020414MarineLPEIMGVSEATKKKDFERGMAAAGIRQNIATRAEMQRAAQQAGLNAGLTGLQQAGDAATRLYQYQ
Ga0211523_1026965613300020414MarineQNIATRAAMIQNAQRAGLNTGMKAAEQAGAALTGQYQYQ
Ga0211528_1008193433300020417MarineLRDVMRLLNPEILAASEARSKKEFERMMAAAGIRQNIATRAAMQQNAQEAGLRAGMTAAQQAGDALTRQYQYQ
Ga0211521_1019530923300020428MarineDFERNMASAGIKQNIATNAQMLAAAQAAGLGMGMTGAQQAGQALTQQYNY
Ga0211576_1059773913300020438MarineLLPEIEAAAEARSKKEFERQMAAKGIRTNIDTRAAMQQRAQQAGLQAGLGALSQAGGALTSQYQYQ
Ga0211574_1049997523300020446MarineLPEIEAAAEARSKKEMERQMAAAGIRQNIRTRAAMQERAQTAGLEAGLDALQKAGGALTSQYQYQ
Ga0211579_1052763523300020472MarineAKKDDFERNMAAAGIRQNIATNAAMLQAAQAAGLGMGLTGAQQAGQALVNQYSYS
Ga0222716_1033858313300021959Estuarine WaterKQELARQMAAAGIRQNIATRAQMLQNAQLAGLGMGATAAQQAGGALTAQYQYQ
Ga0196901_116974123300022200AqueousGQRLAQFKSAETQRDIMRLLLPEVYKASEARSKSEFERNMAAAGIRQNIATRAAMLQAAQQAGLNMGATAAQQAGGALTSQYQYS
Ga0196901_119272823300022200AqueousTKKSDFERQAAMKGIAQNIATRAAMLQNAQAAGLQMGGTAAQQAGQALTQLYQYQ
Ga0255757_1005821213300023117Salt MarshKDMERQMAAAGIRQNIATRAAMQQRAQQAGLQAGLGALQQAGTALTQQYQYQ
Ga0255766_1054898913300023172Salt MarshLPEVYKAAEATKKSDFERQAAMKGIAQNIATRAAMLQNAQAAGLQMGGTAAQQAGQALTQLYQYQ
Ga0208793_108747113300025108MarineRLELLKTAQTQRDVLRTLLPEIEAASEARSKKEMERQMAAAGIRQNIKTRAAMQERAQTAGLEAGLDALQKAGGALTSQYQYQ
Ga0208919_108429333300025128MarineRTLLPEIEAASEARSKKEMERQMAAAGIRQNIKTRAAMQERAQTAGLEAGLDALQKAGGALTSQYQYQ
Ga0209232_123561713300025132MarineGIKQNIATNAAMLQAAQAAGLGMGLTGAQQAGQALTQQYAY
Ga0209645_103710913300025151MarineNPEILAASEARSKKEFERNMAAAGIRQNIATRADMIKAAQQAGLRAGLTAAEQSGRALTQQYQYQ
Ga0209645_104011343300025151MarineATRAAMIQKAQQAGLSAGLTAAEQAGRALTQQYQYQ
Ga0209645_108283613300025151MarineNPEILAASEARSKKEFERNMAAAGIRQNIATRAAMIQKAQQAGLQAGLTAAEQSGRALTQQYQYQ
Ga0208004_108737623300025630AqueousMPYLFQAAEARSKTEFQRQLAAAGVRQNIATAANMLERSQQAAQQMGLNTASQMGAALTSQYQYS
Ga0208795_105725013300025655AqueousQEARDKQNFARQMAAAGIRQNISTRAAMLQNAQAAGLNMGLTAAQQAGNALTSHFQYQ
Ga0208162_108189233300025674AqueousTEATKKSDFERQAAMKGIAQNIATRAAMLQNAQAAGLQMGGTAAQQAGQALTQLYQYQ
Ga0208162_117146823300025674AqueousATRAAMLQAAQAAGLGMGQTAAAQAGGALTSQYQYQ
Ga0208019_118482113300025687AqueousATEATKKSDFERQAAMKGIAQNIATRAAMLQNAQAAGLQMGGTAAQQAGQALTQLYQYQ
Ga0208425_103172733300025803AqueousERQMAAAGIRQNIATRAAMQQAAQAAGLKAGLGAMQQAGDALTRQYQYQ
Ga0209392_104795613300027683Freshwater SedimentELQRQLTAAGVRENIATQGAMLRQAQLGAQQVGAQAASQMGSALTQQYQYS
Ga0209990_1033385313300027816Freshwater LakeQMAAAGIRQNIATAANMLERSQQAAQQMGQTAAQQMGNALTSQYQYS
Ga0209404_1018772433300027906MarineGIRQNIATNATMLQNAQLAGLNMGQTGAQQVGAALTGAYNYS
Ga0135211_100462433300029293Marine HarborMRLLLPEVFKASEARSKAEFERNMAAAGIRQNIATRAAMLQAAQQAGLNMGQTAAQQAGGALTSQYQYQ
Ga0135222_101573713300029301Marine HarborLLNPEILAASEARSKKEFERMMAAAGIRQNIATRAALIQNAQQAGLQAGLTAAEQSGRALTQQYQYQ
Ga0183755_106908613300029448MarineAEQAKKDDFERSMAAEGIKRNILTNAEMLMAAQKAGLDMGTTGAQQAGQALTTQYSY
Ga0307375_1013877413300031669SoilATRAAMLQAAQQAGLGMGAQAASQAGGALTSQYQYQ
Ga0307375_1046509823300031669SoilEFQRQMAAAGIRQNIVTAANMLERSQQAAQQMGLNAAQQMGSALTSQYQYQ
Ga0307377_1017356043300031673SoilEFRSKQELARQMAAAGIRQNIATAANMLERSQQAAQQMGLNAASQAGSALTSQYQYQ
Ga0315291_1028787543300031707SedimentRSKSEMERQMAAAQIRQNISTAANLVQRGQQAAQQMGLTAAQQMGSALTAQYQYQ
Ga0316621_1018635713300033488SoilEFQRQMAAAGIRQNIATAANMLERSQQAAQQMGQTAAQQMGNALTSQYQYS
Ga0334977_0200651_2_1843300033978FreshwaterKAAEARSKTEFQRQMAAAGVRQNILTAANMLERSQQAAQQMGLTAASQAGSALTSQYQYS
Ga0335029_0619138_449_6013300034102FreshwaterFQRQLAAAGIRQNIATNANMLERSQQAAQQMGVNAASQAGSALTSQYQYS
Ga0335056_0324167_695_8353300034120FreshwaterMAAAGVRQNILTAANMLERSQQAAQQMGLTAASQAGSALTSQYQYS
Ga0348337_101182_641_9193300034418AqueousMLGPAGIGQRLAQFKSAETQRDIMRLLLPEVYKASEARSKSEFERNMAAAGIRQNIATRAAMLQAAQQAGLNMGATAAQQAGGALTSQYQYS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.