NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104868

Metagenome Family F104868

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104868
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 76 residues
Representative Sequence VNRPRAADDFETIRARIDELRRERAASAGDRDTRSGKPQSGRGESDAERRRRERIEGSPPPWVPTIFVRNPCA
Number of Associated Samples 81
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.00 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 86.00 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (94.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(41.000 % of family members)
Environment Ontology (ENVO) Unclassified
(47.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.61%    β-sheet: 0.00%    Coil/Unstructured: 61.39%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01425Amidase 29.00
PF04909Amidohydro_2 21.00
PF11154DUF2934 2.00
PF00266Aminotran_5 2.00
PF03321GH3 1.00
PF13426PAS_9 1.00
PF02790COX2_TM 1.00
PF01717Meth_synt_2 1.00
PF02558ApbA 1.00
PF00122E1-E2_ATPase 1.00
PF03100CcmE 1.00
PF13386DsbD_2 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 29.00
COG0474Magnesium-transporting ATPase (P-type)Inorganic ion transport and metabolism [P] 1.00
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 1.00
COG1622Heme/copper-type cytochrome/quinol oxidase, subunit 2Energy production and conversion [C] 1.00
COG2216K+ transport ATPase, ATPase subunit KdpBInorganic ion transport and metabolism [P] 1.00
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 1.00
COG2332Cytochrome c biogenesis protein CcmEPosttranslational modification, protein turnover, chaperones [O] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.00 %
UnclassifiedrootN/A6.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001334|A2165W6_1482557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2388Open in IMG/M
3300001356|JGI12269J14319_10128638All Organisms → cellular organisms → Bacteria → Proteobacteria1146Open in IMG/M
3300004080|Ga0062385_10544263All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium724Open in IMG/M
3300004092|Ga0062389_100185169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium2022Open in IMG/M
3300004092|Ga0062389_101811194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium790Open in IMG/M
3300005177|Ga0066690_10445560All Organisms → cellular organisms → Bacteria → Proteobacteria877Open in IMG/M
3300005184|Ga0066671_10453505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales823Open in IMG/M
3300005444|Ga0070694_101749076All Organisms → cellular organisms → Bacteria → Proteobacteria529Open in IMG/M
3300005526|Ga0073909_10237116All Organisms → cellular organisms → Bacteria → Proteobacteria805Open in IMG/M
3300005532|Ga0070739_10118906All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1454Open in IMG/M
3300005541|Ga0070733_10235067All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1203Open in IMG/M
3300005541|Ga0070733_10542206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria779Open in IMG/M
3300005542|Ga0070732_10827551All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300005554|Ga0066661_10199895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1237Open in IMG/M
3300006794|Ga0066658_10508494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium655Open in IMG/M
3300006797|Ga0066659_10961199All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300006797|Ga0066659_11327058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium600Open in IMG/M
3300006806|Ga0079220_11201478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium626Open in IMG/M
3300006893|Ga0073928_10552340All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300007821|Ga0104323_104275All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300009012|Ga0066710_100841632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1409Open in IMG/M
3300009012|Ga0066710_100994364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1294Open in IMG/M
3300009038|Ga0099829_10829044All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300009038|Ga0099829_11170684All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria637Open in IMG/M
3300009088|Ga0099830_10783458All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300009088|Ga0099830_10902231All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300009089|Ga0099828_10541464All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia1049Open in IMG/M
3300009090|Ga0099827_10014647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5229Open in IMG/M
3300009090|Ga0099827_10861982All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300009143|Ga0099792_11087889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium538Open in IMG/M
3300009789|Ga0126307_10418317All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1081Open in IMG/M
3300010038|Ga0126315_10329721All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria947Open in IMG/M
3300010166|Ga0126306_10529630Not Available934Open in IMG/M
3300010166|Ga0126306_10763659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria778Open in IMG/M
3300010379|Ga0136449_101329130All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1117Open in IMG/M
3300010396|Ga0134126_11656623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium703Open in IMG/M
3300011269|Ga0137392_10256744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae1439Open in IMG/M
3300011270|Ga0137391_10033108All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales4346Open in IMG/M
3300011271|Ga0137393_11718867All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium516Open in IMG/M
3300011440|Ga0137433_1029726All Organisms → cellular organisms → Bacteria1595Open in IMG/M
3300011444|Ga0137463_1045921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1622Open in IMG/M
3300011999|Ga0120148_1013507All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1944Open in IMG/M
3300012189|Ga0137388_10893933Not Available821Open in IMG/M
3300012189|Ga0137388_11317377All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300012199|Ga0137383_10853993All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300012201|Ga0137365_11301534All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium516Open in IMG/M
3300012205|Ga0137362_10357951All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300012205|Ga0137362_10495750All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300012206|Ga0137380_10136057All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2242Open in IMG/M
3300012206|Ga0137380_11184103All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300012207|Ga0137381_10423174All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300012209|Ga0137379_10292670All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1539Open in IMG/M
3300012209|Ga0137379_11171879All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300012210|Ga0137378_10343861All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1386Open in IMG/M
3300012210|Ga0137378_10615379Not Available996Open in IMG/M
3300012350|Ga0137372_11156278All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium526Open in IMG/M
3300012354|Ga0137366_10062543All Organisms → cellular organisms → Bacteria2841Open in IMG/M
3300012359|Ga0137385_11532732All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium530Open in IMG/M
3300012361|Ga0137360_10311981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1308Open in IMG/M
3300012362|Ga0137361_10648105Not Available966Open in IMG/M
3300012362|Ga0137361_10690611All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300012363|Ga0137390_10876238All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300012363|Ga0137390_10942587All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300012363|Ga0137390_10985798All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300012917|Ga0137395_10508771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium867Open in IMG/M
3300012918|Ga0137396_10493726All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300012923|Ga0137359_10914379All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300012927|Ga0137416_10534568All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300013503|Ga0120127_10051312All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium828Open in IMG/M
3300014165|Ga0181523_10507353All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium666Open in IMG/M
3300014501|Ga0182024_10018507All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria12960Open in IMG/M
3300014969|Ga0157376_11739671Not Available659Open in IMG/M
3300017823|Ga0187818_10025219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2546Open in IMG/M
3300017943|Ga0187819_10059618All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2267Open in IMG/M
3300017959|Ga0187779_11264232All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium521Open in IMG/M
3300017961|Ga0187778_11121597All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300018001|Ga0187815_10033315All Organisms → cellular organisms → Bacteria2183Open in IMG/M
3300018085|Ga0187772_10377619All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium983Open in IMG/M
3300020020|Ga0193738_1042929All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1380Open in IMG/M
3300020580|Ga0210403_11351465All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium542Open in IMG/M
3300021081|Ga0210379_10285659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium720Open in IMG/M
3300021402|Ga0210385_11050297All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300021420|Ga0210394_10014535All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7543Open in IMG/M
3300021420|Ga0210394_10227125All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → unclassified Belnapia → Belnapia sp. F-4-11631Open in IMG/M
3300025928|Ga0207700_11658508All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium565Open in IMG/M
3300027645|Ga0209117_1098241Not Available802Open in IMG/M
3300027846|Ga0209180_10311589All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300027867|Ga0209167_10111086All Organisms → cellular organisms → Bacteria1411Open in IMG/M
3300027867|Ga0209167_10527985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria646Open in IMG/M
3300027875|Ga0209283_10324657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → unclassified Belnapia → Belnapia sp. F-4-11013Open in IMG/M
3300027882|Ga0209590_10246111All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300027905|Ga0209415_10014804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria12709Open in IMG/M
3300027905|Ga0209415_10168728All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2146Open in IMG/M
3300028536|Ga0137415_11005691All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300031170|Ga0307498_10307972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium595Open in IMG/M
3300031708|Ga0310686_116411465All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300031718|Ga0307474_10643259All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300031965|Ga0326597_10159249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2687Open in IMG/M
3300032892|Ga0335081_10380106All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1826Open in IMG/M
3300033233|Ga0334722_10153412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1724Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil41.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil7.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.00%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.00%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.00%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001334Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005532Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007821Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300011999Permafrost microbial communities from Nunavut, Canada - A28_65cm_6MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020020Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2165W6_148255733300001334PermafrostVNRPRAADDFETIRARMDELRSERAASDPDEDARSGTAQPGNAESDSERRRRARMKGLPPPWVPTIFVNIPRV*
JGI12269J14319_1012863823300001356Peatlands SoilLNRPRAADDFETIRARVEELRRERGASGANPDRRPGAAKTGARENDAERRRRERMEGWPPPWVPTIFVRDRWS*
Ga0062385_1054426323300004080Bog Forest SoilVSRPRAADDFATIRARIEELRRERAASAADQDGRSGTRASARGESDAERRRRERMEGWPPPWVPTIFVKEPIV*
Ga0062389_10018516923300004092Bog Forest SoilVNRPRAADDFATIRTRIDELRRGRAARPPDRDPGKPHSGRGEGDAERRRRERMEGSPPPWVPTIFIKTPWA*
Ga0062389_10181119413300004092Bog Forest SoilVNRPRAADDFATIRARIEELRRERAASAANQDGRSGNRASGRGESDAEHRRRERMEGRPPPRVPTIFVKEPIV*
Ga0066690_1044556023300005177SoilVNRPRAADDFETIRARIDELRRERAASAADLETRSGKPRAGRGEGDAERRRRERMEGSPPPWAPTIFVRKA*
Ga0066671_1045350523300005184SoilVNRPRAADDFETIRARIDELRRGRTASPPDQGKPQSGHGESDAERRRRERIEGSPPPWVPTIFVRSPRR*
Ga0070694_10174907613300005444Corn, Switchgrass And Miscanthus RhizosphereGGPVSRPRAADDFETIRARLDELRRERAASAPAEDARSGAAPSGNGESDSERRRRARMEGLPPPWVPTIFVRPPRR*
Ga0073909_1023711623300005526Surface SoilVNRPRAADDFETIRARLDELRRERAASAPAEDARSGTAPSGNGESDSERRRRARMEGLPPPWVPTIFVNIPRL*
Ga0070739_1011890623300005532Surface SoilVSRPRAADDFTTIRARMEELRREREAGEPGAAAKHRDSDGERRRRERLEGWPPPWVPTIFVRRQRG*
Ga0070733_1023506743300005541Surface SoilVKRPRAADDFDTIRARMDELRREREASAPDREPRSGMAKSGRGDSDAERRRRERIEGWPPPWVPTIFVRKPRP*
Ga0070733_1054220613300005541Surface SoilVSRPRAADDFVTIRARMEELRRERAGDTADGDGGRAQPGREGDAERRRRARMEGWPPPWVPTIFVKKPRS*
Ga0070732_1082755123300005542Surface SoilVNRPRAADDFEVIRSRIEELRREQTPSAREEDSGTGKPQSGRSEPDAERRRRERMEGWPPPWVPTIFAKNPPA*
Ga0066661_1019989523300005554SoilVSRPRAADDFATIRARLEELRRARDGSAADEVGRSGEPEPRHGNGDSERRRRARMEGLPPPWVPTIFVKKPRA*
Ga0066658_1050849413300006794SoilVNRPRAADDFETIRARIDELRRERAASGPDQGRPQPGRGESDSERRRRERIEGSPPPWVPTIFVKKVYP*
Ga0066659_1096119913300006797SoilVNRPRAADDFETIRARIDELRRERAASAADLETRSGKPRAGRGEGDAERRRRERMEGSPPPWVPTIFVRKALP*
Ga0066659_1132705823300006797SoilVNRPRAADDFETIRARLDELRRERAASPPDQGKPQSGRDESDVERRRRERIEGSPPPWVPTIFVKKTWS*
Ga0079220_1120147813300006806Agricultural SoilVSCPRAADDFAIIRARLEELRREREQSLSGQEAVPVRSGSRRESDAERRRRERIEGLPPPWVPTIFVRKPRR*
Ga0073928_1055234013300006893Iron-Sulfur Acid SpringFETIRARIDELRRGRAASAPDRAARSGKPHSGRGEGESDAERRRRERMEGSPPPWVPTIFVKAPCP*
Ga0104323_10427523300007821SoilMADQSEGGPVNRARAADDFATIRARMDELRRERDVSAGDQQTRSGNPQSGRGESDGERRRRERMEGWPPPWVPTIFVKKPRQ*
Ga0066710_10084163223300009012Grasslands SoilMPEVKKPIEPREFPVSRPRAADDFETIRARLDELRRERATSDGEGDGQAGKVPAGRGDSETERRRRARIEGLPPPWAPTIFVTT
Ga0066710_10099436423300009012Grasslands SoilVNRPRAADDFETIRARIDELRRERAASAADLETRSGKPRAGRGEGDAERRRRERMEGSPPPWAPTIFVRKA
Ga0099829_1082904413300009038Vadose Zone SoilPAGFRFTMRTRAGIADRTKGGPVNRPRAADDFETIRARIVELRRERAASAGDRDTRSGKPQSGRGESDAERRRRERIEGSPPPWVPTIFVKRV*
Ga0099829_1117068423300009038Vadose Zone SoilVSRPRAADDFATIRARIEELRRERGAGAADPDTRSGTAQPGRRESDAERRRRERIEGAPPPWVPTI
Ga0099830_1078345813300009088Vadose Zone SoilMRTRAGIADRTKGGPVNRPRAADDFETIRARIDELRRERATSTRDQDTRSGKPQSGRGESDAERRRRDRIEGSPPPWVPTIFVKRV*
Ga0099830_1090223113300009088Vadose Zone SoilTRAGIADRTKGGPVNRPRAADDFETIRARIDELRRERATSTRDQDTRSGKPQLGRGESDAERRRRERIEGSPPPWVPTIFVKKAWS*
Ga0099828_1054146423300009089Vadose Zone SoilVHRPRAADDFETIRARIEELRRERMPAPQEERRSGSGDSAAERRRRERIEGAPPPWVPTIFIKRSGR*
Ga0099827_1001464733300009090Vadose Zone SoilVNRPRAADDFETIRARIDELRRERATSTRDPDTRSGKPQSGHGESDAERRRRERIEGSPPPWIPTIFVRNPCA*
Ga0099827_1086198223300009090Vadose Zone SoilVNRPRAADDFETIRARLDELRRERGASAGDRDTRSGKPQSGRGESDAERRRRERIEGSPPPWVPTIFVQKPRV*
Ga0099792_1108788913300009143Vadose Zone SoilVNRPRAADDFETIRARIDELRRERTGSAGDRDTRSGKPPTGRGESDAERRRRERIEGSPPPWIPTIFVRNPCA*
Ga0126307_1041831723300009789Serpentine SoilVSNPRAADDFATIRARMEELRREREEVGMGQEPRSAKPGSMRGESDAERRRRERIEGWPPPWVPTIFVKKPRA*
Ga0126315_1032972113300010038Serpentine SoilVSNPRAADDFATIRARLEELRREREEVAVGQEPRSAKPGSMRDESDAERRRRERIEGAPPPWVPTIFVQNPRR*
Ga0126306_1052963023300010166Serpentine SoilFGSTIAPKRRVQKMGGVPVSRPRAADDFDTIRARMDELRREREEVDMGQEPRSAEPGSMRGESDAERHRRERIEGWPPPWVPTIFVKKPRA*
Ga0126306_1076365923300010166Serpentine SoilVSNPRAADDFTTIRARMEELRREREEVGMGQEPRSAKPGSMRGESDAQRRRRERIEGAPPPWVPTIFVKKPRA*
Ga0136449_10132913023300010379Peatlands SoilMPDGTKRGPVNRPRAADDFETIRARIDELRRERAGGSADRGKPQSGRGESDAERRRRERIEGSPPPWVPTIFLKSQRP*
Ga0134126_1165662323300010396Terrestrial SoilMPRVSKTDQIKGGPVSNPRAADDFATIRARMEELRRERATGSEDADPRSGQRSLASVASDAERRRRARIEGWPPPWAPTIFARKPRR*
Ga0137392_1025674413300011269Vadose Zone SoilDPRWNRHRTEGGPVNRPRADDDFETIRARIDELRRERGASAGDRDTRSGKPQSGRGESDAERRRRERIEGSPPPWVPTIFVKRV*
Ga0137391_1003310863300011270Vadose Zone SoilMRTRAGIADRTKGGPVNRPRAADDFETIRARIDELRRERAASAGDRDTRSGKPQSGRGESDAERRRRERIEGSPPPWVPTIFVKRV*
Ga0137393_1171886713300011271Vadose Zone SoilKGGPVNRPRAADDFETIRARIDELRRERATSTRDPDTRSGKPQSGHGESDAERRRRERIEGSPPPWVPTIFVRNPRA*
Ga0137433_102972623300011440SoilVNRPRAADDFETIRARLDELRRERAASEPDAEIRSGKVTAGSRESDAELRRRARMEGWPPPWVPTIFVNKPRL*
Ga0137463_104592123300011444SoilMPGRGNLADREDGSPVSCPRAADDFETIRARLDELRRERTPSEPEQATRPGKLPSGSGDSDAELRRRARMEGWPPPWVPTIFINKPRL*
Ga0120148_101350733300011999PermafrostVNRPRAADDFETIRARMDELRSERAASDPDEDARSGTAPSGQGESDAERRRRARMEGLPPPWVPTIFVKKPRP*
Ga0137388_1089393313300012189Vadose Zone SoilVNRPRAADDFEMIRARIDELRRERATSTRDPDTRSGKPQSGHGESDAERRRRERIEGSPPPWVPTIFVRNPR
Ga0137388_1131737713300012189Vadose Zone SoilTIRARIDELRRERATSTRDQDTRSGKPQLGRGESDAERRRRERIEGSPPPWVPTIFVKKAWS*
Ga0137383_1085399323300012199Vadose Zone SoilRAADDFETIRARIDELRRERAASAADLETRSGKPRAGRGEGDAERRRRERMEGSPPPWAPTIFVRKA*
Ga0137365_1130153413300012201Vadose Zone SoilVNRPRAADDFETIRARIDELRRERAVSAGDRDTRSGKAQSGRGESDAERRRRERIEGSPPAWVPTIFVKRV*
Ga0137362_1035795123300012205Vadose Zone SoilVNRPRAADDFETIRARIEELRREDAANAGDQGARSGKPPPVRGESDSERRRRERIEGSPPPWVPTIFVKGQRP*
Ga0137362_1049575023300012205Vadose Zone SoilMPTRAGIADRTKGGPVNRPRAADDFETIRARIDELRRERAASAGDRDTRSGKPPTGRGESDAERRRRERIEGSPPPWVPTIFVRNPCA*
Ga0137380_1013605723300012206Vadose Zone SoilMTRRWNRRSNQGGPVNRPRAADDFETIRARIEELRRERTASARDHDARSGKPLPGRGESDAERRRRERIEGSPPPWVPTIFVIKLRP*
Ga0137380_1118410313300012206Vadose Zone SoilVNRPRAADDFETIRARIDELRRERAASAGDRDTRSGKAHSGRGESDAERRRRERIEGSPPPWVPTIFVKRV*
Ga0137381_1042317423300012207Vadose Zone SoilMTRRWNRRSNLGGPVNRPRAADDFETIRARIEELRRERTASARDHDARSGKPLPGRGESDAERRRRERIEGSPPPWVPTIFVIKLRP*
Ga0137379_1029267013300012209Vadose Zone SoilMTRRWNRRSNLGGPVNRPRAADDFETIRARIEELRRERTASARDHDARSGKPLPGRGESDAERRRRERIEGSPPPWVPTIFVKKLRP*
Ga0137379_1117187923300012209Vadose Zone SoilMRTRAGIADRTKGGPVNRPRAADDFETIRARIDELRRERAASAGDRDIRSGKPQSGRGESDAERRRRERIEGSPPAWVPTIFVKRV*
Ga0137378_1034386123300012210Vadose Zone SoilMTRRWNRRSNQGGPVNRPRAADDFETIRARIEELRRERTASARDHDARSGKPLPGRGESDAERRRRERIEGSPPPWVPTIFVKKLRP*
Ga0137378_1061537923300012210Vadose Zone SoilVNRPRAADDFETIRARIDELRRERAASAGDRDTRSGKPQSGRGESDAERRRRERIEGSPPPWVPTIFVRNPCA*
Ga0137372_1115627813300012350Vadose Zone SoilVNRPRAADDFETIRARLDELRRERAARAPDQDKPQSGRGESDAERRRRERIEGSPPPWVPTIFVKKTWS*
Ga0137366_1006254323300012354Vadose Zone SoilMTRRWNRRSNQGGPVNRPRAADDFETIRARIDELRRERAASARDQGARSGKPPPGRGESDAERRRRERIEGSPPPWVPTIFAKKV*
Ga0137385_1153273213300012359Vadose Zone SoilMRTRAGIADRTKGGPVNRPRAADDFETIRARIDELRRERAASAGDRDIRSGKPQSGRGESDAERRRRERIEGSPPPWVPTIFVRNPCA*
Ga0137360_1031198123300012361Vadose Zone SoilVNRPRAADDFETIRARIDELRRERAASAGDRDTRSGKPPTGRGESDAERRRRERIEGSPPPWVPTIFVRNPCA*
Ga0137361_1064810513300012362Vadose Zone SoilVNRPRAADDFETIRARIDELRRERTASAGDRDTRSGKPPSGRGESDAERRRRERIEGSPPPWVPTIFVRNPCA*
Ga0137361_1069061113300012362Vadose Zone SoilVNRPRAADDFETIRARIDELRRERAASAGDRDTRSGKPQSGRGESDAERRRRERIEGSPPPWVPTI
Ga0137390_1087623813300012363Vadose Zone SoilFTMGTRAGIADRTKGGPVNRPRAADDFETIRARIDELRRERAANAGDRDTRSGKPPSGRGESDAERRRRERIEGSPPPWVPTIFVKNPRR*
Ga0137390_1094258713300012363Vadose Zone SoilVNRPRAADDFETIRARIDELRRERATSTRDQDTRSGKPQLGRGESDAERRRRERIEGSPPPWVPTIFVRNPRA*
Ga0137390_1098579823300012363Vadose Zone SoilCGTRAGIADRTKGGPVNRPRAADDFETIRARIDELRRERATSTRDPDTRSGKPQSGHGESDAERRRRERIEGSPPPWVPTIFVRNPRA*
Ga0137395_1050877123300012917Vadose Zone SoilVNRPRAADDFETIRARIDELRRERAASAGGRDTRSGKPPSGRGESDAERRRRERIEGSPPPWVPTIFVRNPCA*
Ga0137396_1049372613300012918Vadose Zone SoilMPTRAGIADRTKGGPVNRPRAADDFETIRARIEELRREDAANAGDQGARSGKPPPVRGESDSERRRRERIEGSPPPWVPTIFVNPPRR*
Ga0137359_1091437923300012923Vadose Zone SoilMSRSNQGGPVNRPRAADDFETIRARLDELRRERAASPSDQDKPQSGRGESDAERRRRDRIEGSPPPWVPTIFVKSAWSWPF
Ga0137416_1053456823300012927Vadose Zone SoilMPTRAGIADRTKGGPVNRPRAADDFETIRARIDELRRERAASAGGRDTRSGKPPSGRGESDAERRRRERIEGSPPPWIPTIFVRNPCA*
Ga0120127_1005131213300013503PermafrostVNRPRAADDFETIRARMDELRSERAASDPDEDARSGTAPSGQGESDSERRRRARMEGLPPPWVPTIFVKKPRV*
Ga0181523_1050735313300014165BogMADRTEGGPVKRPRAADDFDTIRARMDELRRERKASAPDREPRSGMAKSGRGDSDAERRRRERIEGWPPPWVPTIFVKKPRP*
Ga0182024_1001850783300014501PermafrostMPDRTKGGPVNRPRAADDFETIRARIDELRRERVASPPDRDARFGKRHSSRGESDAERRRRERMDGSPPPWVPTIFVKAPGA*
Ga0157376_1173967123300014969Miscanthus RhizosphereCRSASLEAPDPRGGKPVSRPRAADDFTTIRARMEELRREREQSLSGQEAMPLLSGSRRGESDAERRRRERIEGLPPPWVPTIFVRKPRS*
Ga0187818_1002521923300017823Freshwater SedimentVNRPRAADDFETIRARIDELRRERAAGAPDQGARAGKPLSGRGEGDAERRRRERMEGSPPPWVPTIFFKKASS
Ga0187819_1005961823300017943Freshwater SedimentVNRPRAADDFEAIRARIDELRRERAAGAPDHGARAGKPLAGSGEGDAERRRRERMEGSPPPWVPTIFFKKASY
Ga0187779_1126423213300017959Tropical PeatlandVRQFHLAERTALSRPRAADDFATIRARMEELRRQREPEAPQSRRASSATGSGDSETERRRRERIEGLPPPWVPTIFVKQPGT
Ga0187778_1112159723300017961Tropical PeatlandMAHHYGAPAGMPSRTTGGLVNRPRAADDFETIRARIEELRRERAPGASGRDARSGKPAEERGEGEADRRRRARMEGWPPPWVPTIFVKIS
Ga0187815_1003331543300018001Freshwater SedimentVNRPRAADDFETIRARIDELRRERAAGAPDHGARAGKPLAGSGEGDAERRRRERMEGSPPPWVPTIFLKGPQA
Ga0187772_1037761913300018085Tropical PeatlandDRTRDTSVNCPRAADDFATIRARVEELRRERGPAAPGQAAPLGDPAQGSGESDADRRRRERMEGWPPPWVPTIFVKTP
Ga0193738_104292923300020020SoilVTRSRAADDFAIRARMEELRREREGSIAGEKPRSAKAILNRGESDAERRRRERIEGVPPPWVPTIFVKKGRP
Ga0210403_1135146523300020580SoilLADRGERIPVKRPRAADDFEVIRARIEELRRAQTPSAREEDSGTGKPQSGRGEKDAERRRRERMEGWPPPWVPTIFAKNPRA
Ga0210379_1028565923300021081Groundwater SedimentMLQWAGQNRRGPVDRPRAADDFETIRARLDELRRERAPSEPGADSRSGKAPAGSGESDAERRRRARMEGLPPPWVPTIFVNNPRR
Ga0210385_1105029723300021402SoilVSRTRAADDFATIRARMEELRRVNASDVDAGGPRRAEGTQPSRDADFERRRQARIEGWPPPWVPTIFMTGPGR
Ga0210394_1001453593300021420SoilVNRPRAADDFEVIRARIDELRRERSPSARDENTGTRTPQSGRCESDAERRRRERMEGWPPPWVPTIFAKKVWP
Ga0210394_1022712523300021420SoilVNRPRAADDFEVIRARVEELRREQTPSPGDRKTATAKPQPGGSEKDAERRRRERIEGWPPPWVPTIFAKNPRA
Ga0207700_1165850823300025928Corn, Switchgrass And Miscanthus RhizosphereVNRPRAADDFETIRARLDELRRERAASDPNGETGSGSAAAASRESEAELRRRARMEGWPPPWVPTIFVRNPRR
Ga0209117_109824123300027645Forest SoilQGGQVNRPRAADDFETIRARIDELRRERAASARDQGARSGKPQSGSGEGDAERRRRERMAGSPPPWVPTIFVKAPRA
Ga0209180_1031158913300027846Vadose Zone SoilDFETIRARIDELRRERATSTRDQDTRSGKPQLGRGESDAERRRRERIEGSPPPWVPTIFVKKAWS
Ga0209167_1011108623300027867Surface SoilVKRPRAADDFDTIRARMDELRREREASAPDREPRSGMAKSGRGDSDAERRRRERIEGWPPPWVPTIFVRKPRP
Ga0209167_1052798523300027867Surface SoilVSRPRAADDFVTIRARMEELRRERAGDTADGDGGRAQPGREGDAERRRRARMEGWPPPWVPTIFVK
Ga0209283_1032465723300027875Vadose Zone SoilVNRPRAADDFETIRARIDELRRERATSTRDQDTRSGKPQLGRGESDAERRRRERIEGSPPPWVPTIFVKKAWS
Ga0209590_1024611123300027882Vadose Zone SoilVNRPRAADDFETIRARIDELRRERAASAGDRDTRSGKPQSGRGESDAERRRRERIEGSPPPWIPTIFVRNPCA
Ga0209415_1001480473300027905Peatlands SoilLNRPRAADDFETIRARVEELRRERGASGANPDRRPGAAKTGARENDAERRRRERMEGWPPPWVPTIFVRDRWS
Ga0209415_1016872813300027905Peatlands SoilVNRPRAADDFETIRARIDELRRERAGGSADRGKPQSGRGESDAERRRRERIEGSPPPWVPTIFLKSQRP
Ga0137415_1100569113300028536Vadose Zone SoilAADDFETIRARIDELRRERAASAGGRDTRSGKPPSGRGESDAERRRRERIEGSPPPWIPTIFVRNPCA
Ga0307498_1030797213300031170SoilMPGRAATADQGERNPVNRPRAADDFETIRARLDELRRERHPSEPDKDARSGTAPSRTSESDSERRRRARMEGLPPPWVPTIFVNIPR
Ga0310686_11641146513300031708SoilVNRPRAADDFATIRARIDELRRERAASAPDQGKPRSGRTEGDAERRRRERMEGSPPPWVPTIFAKKAWS
Ga0307474_1064325923300031718Hardwood Forest SoilVSRTRAADDFATIRARVEELRRERAAAVPDQKGRAGKPPSGRGESDADRRRERIEGWPPPWVPTIFVKSGLP
Ga0326597_1015924933300031965SoilVNRPRAADDFETIRARIDELRRERAASDPDGQTRSSKATAGSRENEAELRRRARMEGWPPPWVPTIFVNKPRL
Ga0335081_1038010623300032892SoilVSRPRAADDFGTIRARLDELRRERDGAAEPGNPSGTAPSGRQGDAERRRRDRIEGAPPPWVPTIFVRKPGV
Ga0334722_1015341213300033233SedimentVNRPRAADDFETIRARLDELRRERAASDADRDTRSGKAPSGSGESDAERRRRERMEGWPPPWVPTIFVNKPRV

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.