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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F104833 |
| Family Type | Metagenome |
| Number of Sequences | 100 |
| Average Sequence Length | 46 residues |
| Representative Sequence | FPAFAHTTGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI |
| Number of Associated Samples | 92 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 19.00 % |
| % of genes from short scaffolds (< 2000 bps) | 19.00 % |
| Associated GOLD sequencing projects | 91 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.29 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (81.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (31.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (55.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 4.05% β-sheet: 28.38% Coil/Unstructured: 67.57% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.29 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF14341 | PilX_N | 38.00 |
| PF06750 | DiS_P_DiS | 6.00 |
| PF00248 | Aldo_ket_red | 2.00 |
| PF07963 | N_methyl | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG1989 | Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase | Cell motility [N] | 18.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 81.00 % |
| All Organisms | root | All Organisms | 19.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300005365|Ga0070688_100895803 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 699 | Open in IMG/M |
| 3300005615|Ga0070702_101379237 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 575 | Open in IMG/M |
| 3300006046|Ga0066652_101259771 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 699 | Open in IMG/M |
| 3300006796|Ga0066665_10992344 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 645 | Open in IMG/M |
| 3300006804|Ga0079221_10508168 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 784 | Open in IMG/M |
| 3300009088|Ga0099830_11137084 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 648 | Open in IMG/M |
| 3300011270|Ga0137391_10962152 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 696 | Open in IMG/M |
| 3300012200|Ga0137382_11061969 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 580 | Open in IMG/M |
| 3300012205|Ga0137362_11346338 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 599 | Open in IMG/M |
| 3300012356|Ga0137371_10146045 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1853 | Open in IMG/M |
| 3300012922|Ga0137394_10746401 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 822 | Open in IMG/M |
| 3300013765|Ga0120172_1118326 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 637 | Open in IMG/M |
| 3300015358|Ga0134089_10266262 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 704 | Open in IMG/M |
| 3300015359|Ga0134085_10321243 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 684 | Open in IMG/M |
| 3300026095|Ga0207676_11547873 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 660 | Open in IMG/M |
| 3300026536|Ga0209058_1256505 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 611 | Open in IMG/M |
| 3300028714|Ga0307309_10125046 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 633 | Open in IMG/M |
| 3300028807|Ga0307305_10323788 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 700 | Open in IMG/M |
| 3300028811|Ga0307292_10261581 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 720 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 22.00% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 17.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 13.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 10.00% |
| Permafrost | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost | 7.00% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 4.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.00% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 2.00% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 2.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.00% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.00% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.00% |
| Soil | Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.00% |
| Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000880 | Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina | Environmental | Open in IMG/M |
| 3300000891 | Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil | Environmental | Open in IMG/M |
| 3300002239 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 | Host-Associated | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005181 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 | Environmental | Open in IMG/M |
| 3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
| 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
| 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
| 3300005540 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 | Environmental | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
| 3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
| 3300006051 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Host-Associated | Open in IMG/M |
| 3300006796 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 | Environmental | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009807 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 | Environmental | Open in IMG/M |
| 3300010039 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56 | Environmental | Open in IMG/M |
| 3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
| 3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
| 3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
| 3300010301 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015 | Environmental | Open in IMG/M |
| 3300010322 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG | Environmental | Open in IMG/M |
| 3300010335 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015 | Environmental | Open in IMG/M |
| 3300010337 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015 | Environmental | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300011003 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015 | Environmental | Open in IMG/M |
| 3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
| 3300011994 | Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M | Environmental | Open in IMG/M |
| 3300012198 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
| 3300012354 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012358 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG | Environmental | Open in IMG/M |
| 3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
| 3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012977 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013765 | Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M | Environmental | Open in IMG/M |
| 3300013768 | Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M | Environmental | Open in IMG/M |
| 3300014058 | Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M | Environmental | Open in IMG/M |
| 3300014150 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014823 | Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M | Environmental | Open in IMG/M |
| 3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015357 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG | Environmental | Open in IMG/M |
| 3300015358 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300015359 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015 | Environmental | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300018027 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex | Environmental | Open in IMG/M |
| 3300019867 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1 | Environmental | Open in IMG/M |
| 3300020002 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1 | Environmental | Open in IMG/M |
| 3300020012 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1 | Environmental | Open in IMG/M |
| 3300020016 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1 | Environmental | Open in IMG/M |
| 3300021080 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo | Environmental | Open in IMG/M |
| 3300021363 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2 | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026331 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes) | Environmental | Open in IMG/M |
| 3300026536 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes) | Environmental | Open in IMG/M |
| 3300026550 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes) | Environmental | Open in IMG/M |
| 3300027056 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes) | Environmental | Open in IMG/M |
| 3300027821 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027862 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300028710 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380 | Environmental | Open in IMG/M |
| 3300028714 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196 | Environmental | Open in IMG/M |
| 3300028716 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198 | Environmental | Open in IMG/M |
| 3300028717 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158 | Environmental | Open in IMG/M |
| 3300028722 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368 | Environmental | Open in IMG/M |
| 3300028778 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142 | Environmental | Open in IMG/M |
| 3300028799 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123 | Environmental | Open in IMG/M |
| 3300028807 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186 | Environmental | Open in IMG/M |
| 3300028811 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149 | Environmental | Open in IMG/M |
| 3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
| 3300028824 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197 | Environmental | Open in IMG/M |
| 3300028876 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140 | Environmental | Open in IMG/M |
| 3300028878 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| AL20A1W_10606211 | 3300000880 | Permafrost | TSTNGSPPVLFPTFLHAAGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI* |
| JGI10214J12806_106274884 | 3300000891 | Soil | PPLVFPVFAHAAGCGCLASLQVDFAVSVKGTSVGAYELTDTIFLRNSTRI* |
| JGI24034J26672_101087771 | 3300002239 | Corn, Switchgrass And Miscanthus Rhizosphere | TKIADYLTSANAFPAFAHTAGCGCLASLRVDFTISLKGSATIDTYDLGDTIYLRNSTRI* |
| Ga0062594_1006885782 | 3300005093 | Soil | ANAFPTFAHTVGCSCLASLRVDFVVSNKGSTVGAYELTDTVFLRNSTRL* |
| Ga0066678_102130732 | 3300005181 | Soil | TPNVFPAFAHASGCGCLASLQLDFPVSLKGSTIDQYELTDTIYLRNSTRI* |
| Ga0066676_103570072 | 3300005186 | Soil | PAFAHTAGCGCLASLQLDFPVSLKGSTIGQYELTDTIYLRNSTRI* |
| Ga0070668_1019411392 | 3300005347 | Switchgrass Rhizosphere | PTFAHTVGCSCLASLRVDFVVSNKGSTVGAYELTDTVFLRNSTRL* |
| Ga0070688_1008958032 | 3300005365 | Switchgrass Rhizosphere | FPAFAHTTGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI* |
| Ga0070705_1014837331 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | AGCGCLASLRVDFTISLKGSATIGTYDLGDTIYLRNSTRI* |
| Ga0070662_1009440851 | 3300005457 | Corn Rhizosphere | DYLTSANAFPTFAHTVGCSCLASLRVDFVVSNKGSTVGAYELTDTVFLRNSTRL* |
| Ga0070699_1001575171 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | AFAHVTGCLCLASLQVDFNVSVTGTSVGAYDLTDTIFLRNSTRI* |
| Ga0066697_104737951 | 3300005540 | Soil | CLASLQLDFPISLKGSTTVDLYELTDTVYLRNSTRI* |
| Ga0070695_1011949131 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | AHTVGCQCLASLQVDFAVSNNGSTRDAYELTDTVFLRNSTRL* |
| Ga0066701_106680792 | 3300005552 | Soil | FSHVSGCGCLASLSVDLPVSVKGSSAGAYRLQDTIFLRNSTRI* |
| Ga0066692_103304422 | 3300005555 | Soil | AFSHVSGCGCLASLSVDLPVSVKGSSAGAYRLQDTIFLRNSTRI* |
| Ga0070702_1013792371 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | AHTTGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI* |
| Ga0066652_1006304651 | 3300006046 | Soil | PAYVHTVGCSCLASLQLDFNVSNRGSTKDAYELTDTVFLRNSTRL* |
| Ga0066652_1012597712 | 3300006046 | Soil | LASLQLDFPVSLKGSTIGQYELTDTVYLRNSTRI* |
| Ga0075364_108203091 | 3300006051 | Populus Endosphere | GCLASLEIDFKVSLKGSNVDSYELTDNIFLRNSTRI* |
| Ga0066665_109923441 | 3300006796 | Soil | NVFPAFAHASGCGCLASLQLDFPVSLKGSTIDQYELTDTIYLRNSTRI* |
| Ga0079221_105081681 | 3300006804 | Agricultural Soil | GRQLAFAHTVGCQCLASLQVDFAVSNNGSTRDAYELTDTVFLRNSTRL* |
| Ga0099830_111370842 | 3300009088 | Vadose Zone Soil | AHVTGCLCLASLQVDFNVSVTGTSVGAYDLTDTIFLRNSTRI* |
| Ga0105242_112004071 | 3300009176 | Miscanthus Rhizosphere | SPPTVFPAFAHTTGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI* |
| Ga0105061_10189621 | 3300009807 | Groundwater Sand | DAFPTFLHETGCSCLASLRVDFPVSLMGSTVDAYELTDTIYLRNSTRI* |
| Ga0126309_111878812 | 3300010039 | Serpentine Soil | LASLQVDFVVSVKGTAVGAYELTDTIFLINSTRI* |
| Ga0126312_106336542 | 3300010041 | Serpentine Soil | LASLKVDFVVSLKGSAIGSYELTDTIFLRNSTRL* |
| Ga0126310_103570982 | 3300010044 | Serpentine Soil | VGCSCLASLRVDFVISNKGSTVDAYELTDTIFLRNSTRL* |
| Ga0126311_114482142 | 3300010045 | Serpentine Soil | DYVSNTSGNVFVAFLHASGCNCLASLEVDFKVSLKGSNIDAYELTDKIFLRNSTRI* |
| Ga0134070_104033401 | 3300010301 | Grasslands Soil | SGVKFADYLTTANVFPTFAHTAGCGCLASLQLDFPISLKGSTTVDLYELTDTVYLRNSTRI* |
| Ga0134084_103021771 | 3300010322 | Grasslands Soil | HAVGCSCLASLRVDFLVSNKRSSLDAYELTDTIFLRNSTRL* |
| Ga0134063_100925151 | 3300010335 | Grasslands Soil | ATCGSSGIKYGDYLTTANVFPSFAHASGCGCLASLQLDFPVSLKGSTIDQYELTDTIYLRNSTRI* |
| Ga0134062_106426082 | 3300010337 | Grasslands Soil | VFPAFAHTAGCGCLASLQLDFPISLKGSTTVDLYELTDTVYLRNSTRI* |
| Ga0134126_103940851 | 3300010396 | Terrestrial Soil | TTCGSSGTKIADYLISANAFPAFAHAAGCGCLASLRVDFTISLKGSATIGTYDLGDTIYLRNSTRI* |
| Ga0138514_1000959521 | 3300011003 | Soil | YLTNANAFPTFAHASGCSCLASLRVDFLISNKGSTVDAYELTDTIFLRNSTRI* |
| Ga0137391_109621521 | 3300011270 | Vadose Zone Soil | DYLTSGNVFPAFAHVTGCLCLASLQVDFNVSVTGTSVGAYDLTDTIFLRNSTRI* |
| Ga0120157_10280811 | 3300011994 | Permafrost | VTGCLCLASLQVDFPVSVKGTSIGAYELKDTIFLRNSTRI* |
| Ga0137364_102460801 | 3300012198 | Vadose Zone Soil | FPQFLHAVGCTCLASLRVDFLVSNKGSSRDAYELTDTIFLRNSTRL* |
| Ga0137364_114540881 | 3300012198 | Vadose Zone Soil | DYLTTANVFPAFAHTAGCGCLASLQLDFPISLKGSTTVDLYELTDTVYLRNSTRI* |
| Ga0137382_110619692 | 3300012200 | Vadose Zone Soil | FAHVTGCLCLASQQADFPVSVQGTSVGAYELQDTIFLRNSTRI* |
| Ga0137362_113463381 | 3300012205 | Vadose Zone Soil | GNAFPAFAHVTGCLCLASLQVDFNVSVTGTSVGAYDLTDTIFLRNSTRI* |
| Ga0137376_107125822 | 3300012208 | Vadose Zone Soil | VTGCLCLASLQVDFNVSVTGTSVGAYDLTDTIFLRNSTRI* |
| Ga0137387_112491221 | 3300012349 | Vadose Zone Soil | KYLTTGTPFTAFTHVVGCGCLASLSVNLPVSVKGSSVGTYRLQDTIFLRNSTRI* |
| Ga0137366_101200752 | 3300012354 | Vadose Zone Soil | VTGCLCLASLQVDFNVSVKGTSVGAYDLNDTIFLRNSTRI* |
| Ga0137371_101460453 | 3300012356 | Vadose Zone Soil | SLRVDFVVSNRGSTVGVQTYELTDTVFLRNSTRI* |
| Ga0137371_102996601 | 3300012356 | Vadose Zone Soil | NGSAPVVFPAFAHDVGCGCLASLQVDFAVSIKGTAVGAYELTDTIFLRNSTRI* |
| Ga0137368_109166572 | 3300012358 | Vadose Zone Soil | ACAHDTGCNCLASLRVDFAVSVKGNAVGAYELTDTIYLRNSARV* |
| Ga0137358_104969341 | 3300012582 | Vadose Zone Soil | PAFAHTTGCLCLASLQVDFNVSVKGTSVGSYDLTDTIFLRNSTRI* |
| Ga0137394_107464011 | 3300012922 | Vadose Zone Soil | LTTAGAFPAFAHTSGCGCLASLQVDFKVSVKGSATIDSYDLADTIYLRNSTRI* |
| Ga0137359_117767772 | 3300012923 | Vadose Zone Soil | CLASLQVDFNVSVTGTSVGAYDLTDTIFLRNSTRI* |
| Ga0164299_101725101 | 3300012958 | Soil | AFAHTAGCGCLASLQVDFTISLKSSATIDTYDLGDTIYLRNSTRI* |
| Ga0164301_106918931 | 3300012960 | Soil | HTTGCGCLASLQVDFAVSVKGTAVGAYELTVTIFLRNSTRI* |
| Ga0164302_118436892 | 3300012961 | Soil | MIADYLSNTTGNVFVAFLHTSGCGCLASLEIDFKVSLKGSNVDSYELTDNIFLRNSTRI* |
| Ga0134087_108229872 | 3300012977 | Grasslands Soil | CGCIASLSVNLPVSVKGSTVGAYRLQDTIFLRNSTRI* |
| Ga0157374_125150291 | 3300013296 | Miscanthus Rhizosphere | HTAGCGCLASLRVDFTISLKGSATIDTYDLGDTIYLRNSTRI* |
| Ga0120172_11183261 | 3300013765 | Permafrost | FLHDAGCGCLASLQVDFAVSIKGTAIGAYELTDTIFLRNSTRI* |
| Ga0120155_10211983 | 3300013768 | Permafrost | GCGCLASLQVDFAVSIKGTAIGAYELTDTIFLRNSTRI* |
| Ga0120155_10734371 | 3300013768 | Permafrost | TNGSPPVLFPTFLHAAGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI* |
| Ga0120149_12011012 | 3300014058 | Permafrost | QASLQVDFAVSIKGTAVGAYELTDTIFLRNSTRI* |
| Ga0134081_103278211 | 3300014150 | Grasslands Soil | LHAVGCTCLASLRVDFLVSNKGSSRDAYELTDTIFLRNSTRL* |
| Ga0134081_103294872 | 3300014150 | Grasslands Soil | DYLTTTNVFPAFAHTAGCGCLASLQLDFPISLKGSTTVDLYELTDTVYLRNSTRI* |
| Ga0157380_100554244 | 3300014326 | Switchgrass Rhizosphere | SSGTKIADYLTSANAFPAFAHTAGCGCLASLRVDFTISLKGSATIDTYDLGDTIYLRNSTRI* |
| Ga0120170_10280781 | 3300014823 | Permafrost | FPAFAHVTGCLCLASLQVDFPVSVKGTSIGAYELKDTIFLRNSSRI* |
| Ga0137409_100415221 | 3300015245 | Vadose Zone Soil | HTTGCLCLASLQVDFNVSVKGTSVGSYDLTDTIFLRNSTRI* |
| Ga0134072_100996271 | 3300015357 | Grasslands Soil | DYLTNADAFPTFAHASGCSCLASLRVDFLISNKGSTVDAYELTDTIFLRNSTRI* |
| Ga0134089_102662621 | 3300015358 | Grasslands Soil | LASLQVDFPVSVKGTSVGAYELTDTIFLRNSTRI* |
| Ga0134085_103212432 | 3300015359 | Grasslands Soil | VTGCLCLASLQVDFPVSVKGTSVGAYELNDTIFLRNSTRI* |
| Ga0132256_1011894252 | 3300015372 | Arabidopsis Rhizosphere | ASLASLSVDFEVSIKGSSSVNNYGLADTIFLRNSTRA* |
| Ga0184605_104721031 | 3300018027 | Groundwater Sediment | CLASLQVDFPVSVKGTSVGAYELKDTIFLRNSTRI |
| Ga0193704_10808781 | 3300019867 | Soil | CGCLASLRVDFTISLKGSATIGTYDLGDTIYLRNSTRI |
| Ga0193730_10337252 | 3300020002 | Soil | FAHTAGCGCLASLQVDFTISLKGSATIDTYDLGDTIYLRNSTRI |
| Ga0193732_10819012 | 3300020012 | Soil | PAFAHAAGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI |
| Ga0193696_10069674 | 3300020016 | Soil | TKIADYLISANAFPAFAHTAGCGCLASLRVDFTISLKGSATIGTYDLGDTIYLRNSTRI |
| Ga0210382_104363312 | 3300021080 | Groundwater Sediment | HDVGCGCLASLQVDFAVSVKGSAVGAYELTDTIFLRNSTRI |
| Ga0210382_105422331 | 3300021080 | Groundwater Sediment | STSGSPPIVFPAFAHAAGCGCLASLQVDFAVSVKGSAVGAYELTDTIFLRNSTRI |
| Ga0193699_103196261 | 3300021363 | Soil | NAFPAFAHTAGCGCLASLKVDFTISLKSSATIGTYDLGDTIYLRNSTRI |
| Ga0222622_1000147312 | 3300022756 | Groundwater Sediment | TPPAASVASLRVDFTVSVKSSTTVDTYDLGDTIYLRNSTRI |
| Ga0207654_100157105 | 3300025911 | Corn Rhizosphere | IADYLTSANAFPAFAHTAGCGCLASLRVDFTISLKGSATIDTYDLGDTIYLRNSTRI |
| Ga0207640_117237951 | 3300025981 | Corn Rhizosphere | PAFAHTVGCTCLASLRVDFVVSNKGSTVGAYELTDTVFLRNSTRL |
| Ga0207676_115478732 | 3300026095 | Switchgrass Rhizosphere | HTTGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI |
| Ga0209267_11175592 | 3300026331 | Soil | YLTSGDVFPGFAHTTGCLCLASLQVDFNVSVKGTSAGAYDLTDTIFLRNSTRI |
| Ga0209058_12565051 | 3300026536 | Soil | AGCGCLASLQLDFPVSLKGSTIGQYELTDTIYLRNSTRI |
| Ga0209474_102839301 | 3300026550 | Soil | SANAFPAFTHTSGCSCLASLRVDFLISNKGSTLDAYELTDTIFLRNSTRI |
| Ga0209474_106958972 | 3300026550 | Soil | LTTPNVFPAFAHASGCGCLASLQLDFPVSLKGSTIDQYELTDTIYLRNSTRI |
| Ga0209879_10648912 | 3300027056 | Groundwater Sand | LTSGNAFPAFAHTSGCGCLASLGVDFIVSVKGSSTVETYELTDTIYLRNSTRI |
| Ga0209811_102706302 | 3300027821 | Surface Soil | AHTAGCGCLASLRVDFTISLKGSATIGTYDLGDTIYLRNSTRI |
| Ga0209701_101397381 | 3300027862 | Vadose Zone Soil | LCLASLQVDFNVSVTGTSVGAYDLTDTIFLRNSTRI |
| Ga0307322_101504312 | 3300028710 | Soil | AFAHTAGCGCLASLRVDFTISLKGSATIGTYDLGDTIYLRNSTRI |
| Ga0307309_101250462 | 3300028714 | Soil | HAAGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI |
| Ga0307311_101680131 | 3300028716 | Soil | SANAFPAFAHTAGCGCLASLRVDFTISLKGSATIGTYDLGDTIYLRNSTRI |
| Ga0307298_100026961 | 3300028717 | Soil | AFPAFAHTSGCLCLASLRVDFTVSVKSSTTVDTYDLGDTIYLRNSTRI |
| Ga0307319_101400352 | 3300028722 | Soil | GCGCLASLRVDFTISLKGSATIGTYDLGDTIYLRNSTRI |
| Ga0307288_100286252 | 3300028778 | Soil | FPAFAHTSGCLCLASLRVDFTVSVKSSTTVDTYDLGDTIYLRNSTRI |
| Ga0307284_100855332 | 3300028799 | Soil | PLVFPVFAHAAGCGCLASLQVDFAVSVKGTAVGAYELTDTIFLRNSTRI |
| Ga0307305_103237882 | 3300028807 | Soil | VTGCLCLASLQVDFPVSVKGTSVGAYDLTDTIFLRNSTRI |
| Ga0307292_102615811 | 3300028811 | Soil | CLASLRVDFVVSNKGSTVGVDTYELTDTVFLRNSTRV |
| Ga0307302_106048312 | 3300028814 | Soil | DYLTTASAFPAFAHTSGCLCLASLQVDFTVSVKSSTTVDTYDLGDTIYLRNSTRI |
| Ga0307310_103490822 | 3300028824 | Soil | TMIADYLTTASAFPTFTHTTGSLAALQVDFIVSVKSSATVDSYDLGDTIYLRNSLRA |
| Ga0307286_100048181 | 3300028876 | Soil | GCGCLASLRVDFTISLKSSATIGTYDLGDTIYLRNSTRI |
| Ga0307286_100183931 | 3300028876 | Soil | PAFAHTSGCLCLASLRVDFTVSVKSSTTVDTYDLGDTIYLRNSTRI |
| Ga0307278_102290692 | 3300028878 | Soil | LTSTNGSPPLVFPAFAHDVGCGCLASLKVDFAVSIKGSAVGAYELTDTIFLRNSTRI |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |