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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F104811 |
| Family Type | Metagenome |
| Number of Sequences | 100 |
| Average Sequence Length | 45 residues |
| Representative Sequence | MKRSYIGLALGALVAVGAALSLPSCGHDQKLVSLEIQPTTFTF |
| Number of Associated Samples | 86 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 20.00 % |
| % of genes from short scaffolds (< 2000 bps) | 20.00 % |
| Associated GOLD sequencing projects | 82 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.38 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (89.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (15.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (40.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (41.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 26.76% β-sheet: 0.00% Coil/Unstructured: 73.24% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.38 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF00873 | ACR_tran | 40.00 |
| PF00578 | AhpC-TSA | 5.00 |
| PF04773 | FecR | 2.00 |
| PF16576 | HlyD_D23 | 2.00 |
| PF03972 | MmgE_PrpD | 1.00 |
| PF03733 | YccF | 1.00 |
| PF02371 | Transposase_20 | 1.00 |
| PF00083 | Sugar_tr | 1.00 |
| PF04545 | Sigma70_r4 | 1.00 |
| PF14559 | TPR_19 | 1.00 |
| PF12867 | DinB_2 | 1.00 |
| PF00144 | Beta-lactamase | 1.00 |
| PF06262 | Zincin_1 | 1.00 |
| PF04679 | DNA_ligase_A_C | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG1680 | CubicO group peptidase, beta-lactamase class C family | Defense mechanisms [V] | 1.00 |
| COG1686 | D-alanyl-D-alanine carboxypeptidase | Cell wall/membrane/envelope biogenesis [M] | 1.00 |
| COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 1.00 |
| COG2079 | 2-methylcitrate dehydratase PrpD | Carbohydrate transport and metabolism [G] | 1.00 |
| COG2367 | Beta-lactamase class A | Defense mechanisms [V] | 1.00 |
| COG3304 | Uncharacterized membrane protein YccF, DUF307 family | Function unknown [S] | 1.00 |
| COG3547 | Transposase | Mobilome: prophages, transposons [X] | 1.00 |
| COG3824 | Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain | Posttranslational modification, protein turnover, chaperones [O] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 89.00 % |
| All Organisms | root | All Organisms | 11.00 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300004152|Ga0062386_100222580 | Not Available | 1489 | Open in IMG/M |
| 3300007258|Ga0099793_10437482 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 646 | Open in IMG/M |
| 3300009635|Ga0116117_1142596 | Not Available | 614 | Open in IMG/M |
| 3300009646|Ga0116132_1096312 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 912 | Open in IMG/M |
| 3300009665|Ga0116135_1147595 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus | 877 | Open in IMG/M |
| 3300009839|Ga0116223_10661479 | Not Available | 601 | Open in IMG/M |
| 3300011270|Ga0137391_10874064 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 737 | Open in IMG/M |
| 3300012205|Ga0137362_11101291 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 675 | Open in IMG/M |
| 3300012363|Ga0137390_11427671 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 635 | Open in IMG/M |
| 3300014168|Ga0181534_10200973 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia | 1040 | Open in IMG/M |
| 3300017946|Ga0187879_10351893 | Not Available | 817 | Open in IMG/M |
| 3300020580|Ga0210403_11088126 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 621 | Open in IMG/M |
| 3300021088|Ga0210404_10784232 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 544 | Open in IMG/M |
| 3300021180|Ga0210396_10957130 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 727 | Open in IMG/M |
| 3300027591|Ga0209733_1136198 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 603 | Open in IMG/M |
| 3300029882|Ga0311368_10624431 | Not Available | 756 | Open in IMG/M |
| 3300030617|Ga0311356_11992240 | Not Available | 513 | Open in IMG/M |
| 3300031525|Ga0302326_11433685 | Not Available | 930 | Open in IMG/M |
| 3300031525|Ga0302326_13162074 | Not Available | 557 | Open in IMG/M |
| 3300032160|Ga0311301_10592476 | Not Available | 1602 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 15.00% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 12.00% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 11.00% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 6.00% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 6.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 6.00% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 5.00% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 4.00% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 4.00% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 4.00% |
| Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 4.00% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 3.00% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.00% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 2.00% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 2.00% |
| Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 2.00% |
| Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 2.00% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.00% |
| Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland | 1.00% |
| Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 1.00% |
| Prmafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 1.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 1.00% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
| 3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300004152 | Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3 | Environmental | Open in IMG/M |
| 3300006086 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 | Environmental | Open in IMG/M |
| 3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
| 3300006800 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 | Environmental | Open in IMG/M |
| 3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
| 3300009029 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189 | Environmental | Open in IMG/M |
| 3300009635 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 | Environmental | Open in IMG/M |
| 3300009645 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 | Environmental | Open in IMG/M |
| 3300009646 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 | Environmental | Open in IMG/M |
| 3300009665 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 | Environmental | Open in IMG/M |
| 3300009839 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG | Environmental | Open in IMG/M |
| 3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
| 3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
| 3300014153 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG | Environmental | Open in IMG/M |
| 3300014168 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG | Environmental | Open in IMG/M |
| 3300014200 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG | Environmental | Open in IMG/M |
| 3300014839 | Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300017822 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2 | Environmental | Open in IMG/M |
| 3300017924 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5 | Environmental | Open in IMG/M |
| 3300017935 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40 | Environmental | Open in IMG/M |
| 3300017938 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150 | Environmental | Open in IMG/M |
| 3300017943 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4 | Environmental | Open in IMG/M |
| 3300017946 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10 | Environmental | Open in IMG/M |
| 3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
| 3300017996 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40 | Environmental | Open in IMG/M |
| 3300018002 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40 | Environmental | Open in IMG/M |
| 3300018016 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40 | Environmental | Open in IMG/M |
| 3300018019 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150 | Environmental | Open in IMG/M |
| 3300018020 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100 | Environmental | Open in IMG/M |
| 3300018022 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40 | Environmental | Open in IMG/M |
| 3300018025 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100 | Environmental | Open in IMG/M |
| 3300018038 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10 | Environmental | Open in IMG/M |
| 3300018042 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10 | Environmental | Open in IMG/M |
| 3300018044 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10 | Environmental | Open in IMG/M |
| 3300018047 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10 | Environmental | Open in IMG/M |
| 3300018085 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
| 3300018090 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300019787 | Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction) | Environmental | Open in IMG/M |
| 3300019788 | Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction) | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
| 3300022521 | Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24 | Environmental | Open in IMG/M |
| 3300023259 | Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24 | Environmental | Open in IMG/M |
| 3300025439 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes) | Environmental | Open in IMG/M |
| 3300025472 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes) | Environmental | Open in IMG/M |
| 3300025496 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes) | Environmental | Open in IMG/M |
| 3300025612 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes) | Environmental | Open in IMG/M |
| 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026354 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B | Environmental | Open in IMG/M |
| 3300027568 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027591 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027676 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027729 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027768 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027783 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027879 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes) | Environmental | Open in IMG/M |
| 3300027898 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes) | Environmental | Open in IMG/M |
| 3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300028552 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1 | Environmental | Open in IMG/M |
| 3300028574 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2 | Environmental | Open in IMG/M |
| 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Host-Associated | Open in IMG/M |
| 3300028808 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2 | Environmental | Open in IMG/M |
| 3300029882 | III_Palsa_E1 coassembly | Environmental | Open in IMG/M |
| 3300029883 | I_Bog_E2 coassembly | Environmental | Open in IMG/M |
| 3300030007 | I_Palsa_E1 coassembly | Environmental | Open in IMG/M |
| 3300030058 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1 | Environmental | Open in IMG/M |
| 3300030617 | II_Palsa_N2 coassembly | Environmental | Open in IMG/M |
| 3300030737 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2 | Environmental | Open in IMG/M |
| 3300031028 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2 | Environmental | Open in IMG/M |
| 3300031234 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2 | Environmental | Open in IMG/M |
| 3300031236 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1 | Environmental | Open in IMG/M |
| 3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
| 3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300033402 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN | Environmental | Open in IMG/M |
| 3300033561 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction | Environmental | Open in IMG/M |
| 3300033803 | Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10 | Environmental | Open in IMG/M |
| 3300033983 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| Ga0062384_1001988332 | 3300004082 | Bog Forest Soil | MKRSYIGLALGVLVAIGAALSLPSCGHDQKLVSLTIQPTTF |
| Ga0062387_1003280531 | 3300004091 | Bog Forest Soil | MRRSSIWIALGALVTVAALLSLPSCGHDQKLVSLAVMPSGGFVFPTPASSPGQFT |
| Ga0062386_1002225802 | 3300004152 | Bog Forest Soil | MKRSHIGLVLGTLVVIGAVLSLPSCGHDEKVVSITITPTTSTFASPGFTPPPA |
| Ga0075019_102474492 | 3300006086 | Watersheds | MKRKYVGLAMGALLAVGAALSLPSCGHDQKLVSVTVNPTGGFTFLSDTPTLTFQY |
| Ga0075019_111210941 | 3300006086 | Watersheds | MKRSFIGLAMGTLVAVGAALSLPSCGHDQKLVSLQIMPQTFTFL |
| Ga0066659_103960681 | 3300006797 | Soil | MKRNYIGLALGALVTVGAALSLPSCGHDQKLVSLTVQPSGGFVFPVPNA |
| Ga0066660_115674962 | 3300006800 | Soil | MKRNYIGLALGALVTVGAALSLPSCGHDQKLVSLTVQPSGGFVFPVPNAGATGQY |
| Ga0099793_104374821 | 3300007258 | Vadose Zone Soil | MKRNYIGLALGALVTVGAALSLPSCGHDQKLVSLTVQPSGGFVFPVPNAGATGQYTA |
| Ga0066793_104552292 | 3300009029 | Prmafrost Soil | MKRSYIGLALGALVSVGAVLSLPSCGHHQKLVSLAVQPPAHTFLTPDASATE |
| Ga0116117_11425962 | 3300009635 | Peatland | MKVGSIGLALIALVTLGAVLSLPSCGHDQKVVSLTITPTTSTFLEPGFIPPP |
| Ga0116117_11882991 | 3300009635 | Peatland | MKRGYVGIALGALMAVGAALSLPSCGHDQKVVSLT |
| Ga0116106_11522981 | 3300009645 | Peatland | MKRSYIGLALGALVAVGATLSLPSCGHDQKLVSIAVQPLNYTFLTPDTSAQEQFTA |
| Ga0116106_12014542 | 3300009645 | Peatland | MKRSYIGLALGALVAAGAALILPSCGRDKQLVSIE |
| Ga0116132_10963121 | 3300009646 | Peatland | MKRSYIGLALGALVAVGAALSLPSCGHDQKLVGLEVQPGAFTFLNP |
| Ga0116135_11475951 | 3300009665 | Peatland | MKRGYAGIALGALMAVGAALSLPSCGHDQKVVSLTITPATSTFASPGFTPPP |
| Ga0116135_13150641 | 3300009665 | Peatland | MKRRHIGLAMGAMMVLGAALSLPSCGHDQKLVSLTIQPAAFTFLEPYSPP |
| Ga0116223_106614791 | 3300009839 | Peatlands Soil | MKRSYIGLALGALVAVGAVLSTPSCGHDQKLVSLEIQ |
| Ga0074044_103918522 | 3300010343 | Bog Forest Soil | LGTLVAVGAALSLPSCGHDQKLVSLEIQPGTFTFLEPYP |
| Ga0074044_104147411 | 3300010343 | Bog Forest Soil | MKRSYIGLALGALVAVGAALSLPSCGHDQKLVSLAVDPPSPGFTFPVPTTGA |
| Ga0137391_108740642 | 3300011270 | Vadose Zone Soil | MKWSYIGLAFGALVAVGAVLSLPSCGNDKKLVGLQIQPGLVTYPSP |
| Ga0137362_111012911 | 3300012205 | Vadose Zone Soil | MKRSYIGLALSAVVVVGAVLGLPSCGHDQKLVSLTVQPSGGFVFPVPNA |
| Ga0137362_116243912 | 3300012205 | Vadose Zone Soil | MKRSYIGLALGALVAVGAVLSLPSCGHDQKLVSITIQ |
| Ga0137390_114276711 | 3300012363 | Vadose Zone Soil | MKRSYIGLALGALVVVGAVLSLPSCGHDQKLVSLTVQPSGGFVFP |
| Ga0181527_13899551 | 3300014153 | Bog | MGMKRSYIGLALGALVAVGAVLSLPSCGHDQKLVGITVQPPGFTFLLADKDQTT |
| Ga0181534_102009731 | 3300014168 | Bog | MKRSYIGLALGALVAVGALLSLPSCGHSQKLVGLTITPTTSTFLEPGFT |
| Ga0181526_103474862 | 3300014200 | Bog | MKRSYIALALGALVTVGAVLSLPSCGHSQKLVSLEIQPATFTFLEPY |
| Ga0182027_117639102 | 3300014839 | Fen | MKRSYIGLALGVLVAVGAVLSLPSCGHDQKLVSLAVQPASPGFTFP |
| Ga0187802_100527422 | 3300017822 | Freshwater Sediment | MKRRYVGLAMGALLAVGGALSLPSCGHDQKVISVTITPTTSTFLEQ |
| Ga0187820_10893461 | 3300017924 | Freshwater Sediment | MKRRYVGLALGALLAVGGALSLPSCGHDQKVISVTITPTTSTFLEP |
| Ga0187848_102973221 | 3300017935 | Peatland | MKRSYIGLALGALVAVGAALSLPSCGHSQKLVSLEVQPGAFTFLNPY |
| Ga0187854_103544021 | 3300017938 | Peatland | MKRSYIGLALGALVAVGAVLSLPSCAHDQKVVSLTITPTTSTFASP |
| Ga0187819_100924511 | 3300017943 | Freshwater Sediment | MKRGFIGLAMGAVIAVGAGLSLPSCGHDQKVVGLTITPTTSTFP |
| Ga0187879_103518932 | 3300017946 | Peatland | MKRNYVGLALAALVALGASLSLPSCGHSQKLVSIAVTPTTANY |
| Ga0187817_100887714 | 3300017955 | Freshwater Sediment | MKGSYVGLAIGALIAVGTLLTFPSCGHDQKLVSLTIT |
| Ga0187891_10110991 | 3300017996 | Peatland | VVGMKKQSYIGLAMGALVAVGAALSLPSCGRDKQLVSLEIH |
| Ga0187891_10114761 | 3300017996 | Peatland | MKKQSYIGLAMGALVAVGAALSLPSCGRDKQLVSLEIH |
| Ga0187868_10493491 | 3300018002 | Peatland | MKRSYIGLALGALVAAGAALILPSCGRDKQLVSIEIHPGSFTFLEP |
| Ga0187880_13250491 | 3300018016 | Peatland | MKRSYIGLAMGTLVAVGAALSLPSCGHDQKLVTLQVNPAGFTFLTATAGAQGQFSAIGT |
| Ga0187874_102834882 | 3300018019 | Peatland | MKRRYIGLALGALVAVGAALSLPSCGHDQKLVSLTVSPATALY |
| Ga0187861_102575942 | 3300018020 | Peatland | MKRSYIGLAMGTLVAVGAALSLPSCGHDQKLVTLQVN |
| Ga0187864_102675193 | 3300018022 | Peatland | MKRSYIGFALGALVAAGAALSLPSCGRDKQLVSLEIHP |
| Ga0187885_102634551 | 3300018025 | Peatland | MKRSYIGLALGALVAAGAVLSLPSCGHDQKLVSLAVQPPTA |
| Ga0187855_101921651 | 3300018038 | Peatland | MKRSYIGLALGVLVAIGALLSLPSCGHDQKLVSLTITPTTFTFLEPGFNPPP |
| Ga0187871_102220963 | 3300018042 | Peatland | MKRNYVGLALAAMVALGASLSLPSCGHSQKLVSLTIT |
| Ga0187890_102722931 | 3300018044 | Peatland | MKVGSIGLALIALVTLGAVLSLPSCGHDQKVVSLTITPTTSTFL |
| Ga0187859_101331623 | 3300018047 | Peatland | MKRSYIGLALGALVAVGAALSLPSCGHSQKLVSLEVQPGAFTF |
| Ga0187772_114975631 | 3300018085 | Tropical Peatland | MKSRYIGLAMGVLVVLGAALSLPSCGHDQKLESITVTPTSAIYPSPDSG |
| Ga0187770_104040981 | 3300018090 | Tropical Peatland | MKRGYIGLALGALMVLGAALSLPSCGHDQKVVSLTVTPATATF |
| Ga0182031_14324405 | 3300019787 | Bog | MKRSYIGLALGALVAVGAVLSLPSCAHDQKVVSLTITPTTS |
| Ga0182028_14625061 | 3300019788 | Fen | MKRSYIGLALCALVAVGAALSLPSCGHDQKLVSIAITPQTFTFSD |
| Ga0210403_110881261 | 3300020580 | Soil | MKRSYIGLALSALVAVGAVLSLPSCGHDQKVVSLTITPTTSTFLEPGF |
| Ga0210404_107842321 | 3300021088 | Soil | MKRSYIGLALAALVTVGVVLSLPSCGHDQKLVSLQVQPASPGFTFPVPTAG |
| Ga0210396_109571302 | 3300021180 | Soil | MKRSYIGLALGALVAIGVVLGLPSCGHDQKLVSLQILP |
| Ga0210394_106172831 | 3300021420 | Soil | MKRSYIGLALGALVAIGVVLSLPSCGHDQKLVSLQIL |
| Ga0210398_114583761 | 3300021477 | Soil | MKRSYIGLVLGALVAVVAALSLPSCGHDQKLVSIQIQ |
| Ga0224541_10026892 | 3300022521 | Soil | MKRSYIGLALGALVAVGAALSLPSCGHSQKLVGLTVQPSAGFIFSQATAGATGEFTA |
| Ga0224551_10017513 | 3300023259 | Soil | MKRSFIGLALGALVAVGVVLSLPSCGHDQKLVSLAVQPASPGFTFPVPAA |
| Ga0208323_10315332 | 3300025439 | Peatland | MKRSYIGLALGALVAAGAVLSLPSCGHDQKLVSLAVQPPTALYPT |
| Ga0208692_10824752 | 3300025472 | Peatland | MKRSYIGLALGALVAVGAALSLPSCGHDQKLVSLEIQPTTFTF |
| Ga0208191_10030761 | 3300025496 | Peatland | MKRSYIGLALGALVAVGAALSLPSCGHDQKLVGLEVQPGAFTFLNPYPTTLTEQY |
| Ga0208691_10933101 | 3300025612 | Peatland | MNSRYVGLALAMLVAVGGALSLPSCGHDQKLVSLQIQPLSHTFIEATAGQ |
| Ga0207664_102111491 | 3300025929 | Agricultural Soil | MKRSGIGVALGALIAVGAVLSLPGCGHDKKLVSLQVQPSGFTFAVP |
| Ga0257180_10530731 | 3300026354 | Soil | MKKRSYIGLALGALVVVGAVLSLPSCGNDKKLVNIQVQP |
| Ga0208042_11803491 | 3300027568 | Peatlands Soil | MKRSYIGLAMGALVALGAVLSLPSCGHDQKLVSLQVNPAGFTFLKPTAGAQ |
| Ga0209733_11361981 | 3300027591 | Forest Soil | MKWSYIGLAMGALVTVGAMLSLPSCGHDQKLVSLTIQPNTFTFLTQSGTEQYT |
| Ga0209333_10307091 | 3300027676 | Forest Soil | MKRSYIGLALGALVAVGAALSLPSCGHDQKLVSLQIQPQTFTFLTPETSAQEQ |
| Ga0209333_11112401 | 3300027676 | Forest Soil | MKRKYFGLAIGGLIAVGAALSLPSCGHDQKLVSIAVQPTSYTFLQN |
| Ga0209248_101784501 | 3300027729 | Bog Forest Soil | MRRSSIWIALGALVTVAALLSLPSCGHDQKLVSLAVMPSGGFVFSTPA |
| Ga0209772_100995512 | 3300027768 | Bog Forest Soil | MKRNYLRLLGTLVVVGVVLSMPSCGHDQKLVSLEIQPGTFTFLNPYS |
| Ga0209448_102424061 | 3300027783 | Bog Forest Soil | MRRRYFGLALGALVAVGAVLCLPSCGHDQKLVSIAV |
| Ga0209169_103272073 | 3300027879 | Soil | MKRSYIGLALSTLVAVGGVLSLPSCGHDQKLVSIQIQPQTFTFLTVTE |
| Ga0209067_108999122 | 3300027898 | Watersheds | MGTVITVGAALSLPSCGHDQKLVSLTIQPGAFTFLTPYVPP |
| Ga0209067_109490622 | 3300027898 | Watersheds | MKRSFIGLAMGTLVAVGAALSLPSCGHDQKLVSLQIMP |
| Ga0209006_111342152 | 3300027908 | Forest Soil | MKRKCLGLAVGLLIAVGAVLSLPSCGHDQKLESIQVQPSSYTFLQNV |
| Ga0209698_101764861 | 3300027911 | Watersheds | MRGRYVGLAMGALAAVAVLLSFPSCGHDQKLVSVTIQPTTFTFLTQAGSEQY |
| Ga0209698_103989541 | 3300027911 | Watersheds | MKRSYIGLALGALVAVGAALSLPSCGHDQKLVSITVS |
| Ga0302149_11782121 | 3300028552 | Bog | MKRSSIGLALVGLVTVGAVLSLPSCGHDQKLVSIQVQPPT |
| Ga0302153_103013161 | 3300028574 | Bog | MKVGSIGLALIALVTLGAVLSLPSCGHDQKVVSLTIT |
| Ga0265338_110128461 | 3300028800 | Rhizosphere | MKRSYIGLAMGTLVAIGAVLSLPSCGHDQKLVSLTVQPSGGFVFPTPA |
| Ga0302228_104980601 | 3300028808 | Palsa | MKRSYIGLALGALVAVGAALSLPSCGHSQKLVGLTVQPSAGFIFSQATAGATGEFTATASYI |
| Ga0311368_104455392 | 3300029882 | Palsa | MKRSFIGLALGVLVAVGAVLGLPSCGHDQKLTAVT |
| Ga0311368_106244311 | 3300029882 | Palsa | MKRSYIGLALGVLVAVGAALSLPSCGHSQKLTSLTIQPQTFTFLTPDTSATE |
| Ga0311327_102177052 | 3300029883 | Bog | MKVGSIGLALIALVTLGAVLSLPSCGHDQKVVSLTITPTTSTFLEP |
| Ga0311327_104482741 | 3300029883 | Bog | MKRSSIGLALVALVTLGAALSLPSCGHDQKVVSLTITPVTSTFLEPGFI |
| Ga0311338_107747791 | 3300030007 | Palsa | MRRGYIGLALGALVTVGMVLSLPSCGHDRKLVSVQITPQ |
| Ga0302179_100055786 | 3300030058 | Palsa | MKRSYIGLALGALVAVGAALSLPSCGHSQKLVGLTVQPSAG |
| Ga0311356_119922401 | 3300030617 | Palsa | MKRSYIGLALGVLVAVGAALSLPSCGHSQKLTSLTIQPQTFT |
| Ga0302310_104100912 | 3300030737 | Palsa | MKLSWIGLAFGTLLAMGAALSLPSCGHDRKLESITV |
| Ga0302180_100035109 | 3300031028 | Palsa | MKRSYIGLALGALVAVGAALSLPSCGHDRKLVSIQVQPQTFTFLTGGA |
| Ga0302325_103725362 | 3300031234 | Palsa | MKLRWIGLALGTLLAMGAALSLPSCGHDQKLVALQ |
| Ga0302324_1014690952 | 3300031236 | Palsa | MKRSYIGLALGALVAVGAALSLPSCGHSQKLVGLTVQPSAGFIFSQ |
| Ga0302326_114336851 | 3300031525 | Palsa | MKRGHIGLALGALMAVGAVLSLPSCGHDQKLVSLQVQP |
| Ga0302326_131620741 | 3300031525 | Palsa | MKRSYIGLAFGVLVAVGTALSLPSCGHSQKLVSLTVTPATATYLAPNAVPAVFQ |
| Ga0311301_105458621 | 3300032160 | Peatlands Soil | MKRRYIGLALGALVALGAVLSLPSCGHDQKLVSLQVNPAGFTFLKPTAGA |
| Ga0311301_105924761 | 3300032160 | Peatlands Soil | MKRSYIGLALGALVAVGAVLTLPSCGHDQKLVSLQVNPAGFTFLTPNAGATGQFTAIGT |
| Ga0307472_1003498843 | 3300032205 | Hardwood Forest Soil | MKKRSYIWLALGALVAVGAVLSLPSCGNDKKLVNIT |
| Ga0326728_104478542 | 3300033402 | Peat Soil | MKRSYIGLAMGALVAVGAALSLPSCGFDKKLVNLQIQPAGFTFPLPNA |
| Ga0371490_11094771 | 3300033561 | Peat Soil | MKRGYIGLAMGVMVALGAFLSLPSCGHDQKVVSITITPTSFTFL |
| Ga0314862_0185912_405_515 | 3300033803 | Peatland | MRRRYVGLAIALLMVMGAALSLPSCGHDQKLVSLQVQ |
| Ga0371488_0005652_11657_11782 | 3300033983 | Peat Soil | MKQSYIGLALGALVAVGAVLSLPSCGHDQKLVSLEIQPATFT |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |