NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F104767

Metagenome / Metatranscriptome Family F104767

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104767
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 76 residues
Representative Sequence SVLEAMREAADPNQGKDWCWFWDGPVKGEWIGEDLLFCRRIKSLGFPIYVNTGAILPHSKSYWLKEEHHELWRD
Number of Associated Samples 90
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 7.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 87.00 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Duplodnaviria (87.000 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(23.000 % of family members)
Environment Ontology (ENVO) Unclassified
(57.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(56.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.47%    β-sheet: 17.65%    Coil/Unstructured: 55.88%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF05135Phage_connect_1 82.00
PF09250Prim-Pol 1.00
PF09723Zn-ribbon_8 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002201|metazooDRAFT_1262509All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage643Open in IMG/M
3300002202|metazooDRAFT_1253037All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage620Open in IMG/M
3300002476|metazooDRAFT_10780156All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage562Open in IMG/M
3300002835|B570J40625_100037198All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage7383Open in IMG/M
3300003431|JGI25913J50563_1076984All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage506Open in IMG/M
3300003491|JGI25924J51412_1073506All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage519Open in IMG/M
3300004793|Ga0007760_10857131All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1017Open in IMG/M
3300005418|Ga0068881_1023166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae2488Open in IMG/M
3300005420|Ga0068879_1659774All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage549Open in IMG/M
3300005525|Ga0068877_10376287All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage806Open in IMG/M
3300005581|Ga0049081_10000284All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage20033Open in IMG/M
3300006018|Ga0068875_1008803All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage894Open in IMG/M
3300006802|Ga0070749_10216018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1094Open in IMG/M
3300006805|Ga0075464_10073974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1923Open in IMG/M
3300006805|Ga0075464_10311600All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300007304|Ga0102689_1000602All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage687Open in IMG/M
3300007538|Ga0099851_1014294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3237Open in IMG/M
3300007640|Ga0070751_1194715All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage791Open in IMG/M
3300007708|Ga0102859_1220929All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage565Open in IMG/M
3300008107|Ga0114340_1098160All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1176Open in IMG/M
3300008107|Ga0114340_1254815All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage534Open in IMG/M
3300008116|Ga0114350_1136923All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage708Open in IMG/M
3300009026|Ga0102829_1273257All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage559Open in IMG/M
3300009081|Ga0105098_10476032All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage632Open in IMG/M
3300009082|Ga0105099_10226273All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1078Open in IMG/M
3300009085|Ga0105103_10371050All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage789Open in IMG/M
3300009159|Ga0114978_10198941All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1267Open in IMG/M
3300009159|Ga0114978_10327246All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage932Open in IMG/M
3300009160|Ga0114981_10382473All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage759Open in IMG/M
3300009164|Ga0114975_10350134All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage812Open in IMG/M
3300009169|Ga0105097_10895660All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage509Open in IMG/M
3300009184|Ga0114976_10329646All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage811Open in IMG/M
3300009474|Ga0127390_1144942All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage606Open in IMG/M
3300010354|Ga0129333_10313929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1401Open in IMG/M
3300010885|Ga0133913_10521553All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3129Open in IMG/M
3300012666|Ga0157498_1043226All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage692Open in IMG/M
3300012707|Ga0157623_1008109All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage526Open in IMG/M
3300012715|Ga0157599_1157613All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage539Open in IMG/M
3300012731|Ga0157616_1127087All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1297Open in IMG/M
3300013004|Ga0164293_10158437All Organisms → Viruses → Predicted Viral1674Open in IMG/M
3300013006|Ga0164294_10787370All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage641Open in IMG/M
(restricted) 3300013131|Ga0172373_10352105All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage931Open in IMG/M
3300013372|Ga0177922_10988519All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1091Open in IMG/M
3300013372|Ga0177922_11280777All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1040Open in IMG/M
3300016699|Ga0180058_1027727All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage770Open in IMG/M
3300017716|Ga0181350_1163652All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage514Open in IMG/M
3300017722|Ga0181347_1166915All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage594Open in IMG/M
3300017723|Ga0181362_1034164All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1080Open in IMG/M
3300017723|Ga0181362_1051715All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage853Open in IMG/M
3300017761|Ga0181356_1002973All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage7051Open in IMG/M
3300018790|Ga0187842_1069761All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1087Open in IMG/M
3300019784|Ga0181359_1000086All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage17986Open in IMG/M
3300020083|Ga0194111_10910965All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage521Open in IMG/M
3300020109|Ga0194112_10361764All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1067Open in IMG/M
3300020200|Ga0194121_10299897All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage820Open in IMG/M
3300020557|Ga0208231_1055649All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage608Open in IMG/M
3300020566|Ga0208222_1081146All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage541Open in IMG/M
3300021959|Ga0222716_10167027All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1422Open in IMG/M
3300021961|Ga0222714_10343692All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage804Open in IMG/M
3300021961|Ga0222714_10498467All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage625Open in IMG/M
3300022190|Ga0181354_1175669All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage654Open in IMG/M
3300022407|Ga0181351_1087252All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1231Open in IMG/M
3300023179|Ga0214923_10188137All Organisms → Viruses → Predicted Viral1234Open in IMG/M
3300024346|Ga0244775_10561191All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage929Open in IMG/M
3300024357|Ga0255165_1006525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2404Open in IMG/M
3300024510|Ga0255187_1021987All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage891Open in IMG/M
3300024563|Ga0255236_1066225All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage834Open in IMG/M
3300025896|Ga0208916_10159790All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage970Open in IMG/M
3300027153|Ga0255083_1028718All Organisms → Viruses → Predicted Viral1167Open in IMG/M
3300027157|Ga0255204_1086837All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage546Open in IMG/M
3300027631|Ga0208133_1039050All Organisms → Viruses → Predicted Viral1168Open in IMG/M
3300027644|Ga0209356_1089173All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage910Open in IMG/M
3300027659|Ga0208975_1030132All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1737Open in IMG/M
3300027710|Ga0209599_10161757All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage598Open in IMG/M
3300027972|Ga0209079_10094472All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1020Open in IMG/M
3300028025|Ga0247723_1041893All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1357Open in IMG/M
(restricted) 3300028559|Ga0247831_1250747All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage620Open in IMG/M
3300031787|Ga0315900_10749870All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage682Open in IMG/M
3300031857|Ga0315909_10521079All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage815Open in IMG/M
3300031963|Ga0315901_10308289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1308Open in IMG/M
3300031963|Ga0315901_11027394All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage573Open in IMG/M
3300032050|Ga0315906_10292980All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1470Open in IMG/M
3300032050|Ga0315906_10336590All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1342Open in IMG/M
3300032093|Ga0315902_10738190All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage792Open in IMG/M
3300033980|Ga0334981_0357851All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage633Open in IMG/M
3300033996|Ga0334979_0397595All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage762Open in IMG/M
3300033997|Ga0310131_085199All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage581Open in IMG/M
3300034023|Ga0335021_0444228All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage668Open in IMG/M
3300034062|Ga0334995_0410337All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage845Open in IMG/M
3300034066|Ga0335019_0622978All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage629Open in IMG/M
3300034106|Ga0335036_0006148All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage10123Open in IMG/M
3300034106|Ga0335036_0150190All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1659Open in IMG/M
3300034109|Ga0335051_0042525All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2447Open in IMG/M
3300034116|Ga0335068_0037380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2898Open in IMG/M
3300034118|Ga0335053_0117860All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1820Open in IMG/M
3300034118|Ga0335053_0410932All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage819Open in IMG/M
3300034120|Ga0335056_0564849All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage591Open in IMG/M
3300034122|Ga0335060_0016979All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4822Open in IMG/M
3300034200|Ga0335065_0029239All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3884Open in IMG/M
3300034418|Ga0348337_138839All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage709Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater23.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake17.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater7.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous7.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment5.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater5.00%
LakeEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake3.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton3.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater2.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.00%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.00%
Freshwater, Surface IceEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice1.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.00%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond1.00%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.00%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water1.00%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002201Freshwater microbial communities from San Paulo Zoo lake, Brazil - SEP 2013EnvironmentalOpen in IMG/M
3300002202Freshwater microbial communities from San Paulo Zoo lake, Brazil - SEP 2012EnvironmentalOpen in IMG/M
3300002476Freshwater microbial communities from San Paulo Zoo lake, Brazil - NOV 2012EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003431Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300003491Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300004793Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005418Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel3S_1000h metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005420Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300006018Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300007304Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300009026Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300009474Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 3m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300012666Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2EnvironmentalOpen in IMG/M
3300012707Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES154 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012715Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES122 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012731Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES145 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300016699Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES160 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300018790Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_41EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020083Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300mEnvironmentalOpen in IMG/M
3300020109Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400mEnvironmentalOpen in IMG/M
3300020200Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50mEnvironmentalOpen in IMG/M
3300020557Freshwater microbial communities from Lake Mendota, WI - 15JUN2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020566Freshwater microbial communities from Lake Mendota, WI - 13SEP2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024357Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8dEnvironmentalOpen in IMG/M
3300024510Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_8hEnvironmentalOpen in IMG/M
3300024563Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027153Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8hEnvironmentalOpen in IMG/M
3300027157Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepC_8hEnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027644Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027710Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300028559 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_1mEnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300033980Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300033997Fracking water microbial communities from deep shales in Oklahoma, United States - MC-FT7-solEnvironmentalOpen in IMG/M
3300034023Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034109Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158EnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M
3300034118Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165EnvironmentalOpen in IMG/M
3300034120Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172EnvironmentalOpen in IMG/M
3300034122Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181EnvironmentalOpen in IMG/M
3300034200Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
metazooDRAFT_126250913300002201LakeAGTGCLLIHRSVLEAMRENSDPNQGKDWCWFWDGPVNGEWIGEDLLFCRRIKALGFSIHVNTGAILPHSKSFWLDENHHELWRD*
metazooDRAFT_125303713300002202LakeAAGTGCLLIHRSVLEKMRETADPSMGKNWCWFWDGPVNGEWIGEDLLFSRRIRSLGYPIFVNTGAILPHLKSYWLDDRHHKLWKH*
metazooDRAFT_1078015613300002476LakeLMVHRSVLEAIRDAADPNQGKDWCWFWDGPVNGEWIGEDLLFCRRIKSLGFPIYVNTGAILPHSKSYWLDDEHHDLWRD*
B570J40625_10003719813300002835FreshwaterLIHRSVLEKMRETADKNQGPDWCWFWDGPVDGNWIGEDLLFCRRIRALGFPIYVNTGAILPHQKSYWLDERHHQLWKD*
JGI25913J50563_107698423300003431Freshwater LakeAMREAADPNQGKDWCWFWDGPVKGEWIGEDLLFCRRIKSLGFPIYVNTGAILPHSKSYWLKEEHHELWRD*
JGI25924J51412_107350613300003491Freshwater LakeFQVDAAGTGCLLIHRSVLEAIQADADPHQGKDWCWFWDGPINGEWIGEDLQFCRRVRSLGFPIYVHTGAILPHSKSYWLDDRQHDIWNA*
Ga0007760_1085713113300004793Freshwater LakeIHRSVLEKMREVADPNQGTDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD*
Ga0068881_102316673300005418Freshwater LakeEKMREMADPHQGTDWCWFWDGPVNGTWTGEDLLFSRRVRSLGYPIYVNTAAILPHQKQYWLDERHHDKWQAENG*
Ga0068879_165977423300005420Freshwater LakeADPHQGTDWCWFWDGPVNGTWTGEDLLFSRRVRSLGYPIYVNTAAILPHQKQYWLDERHHDKWQAENG*
Ga0068877_1037628713300005525Freshwater LakeAMQADADPHQGKDWCWFWDGPINGEWIGEDLQFCRRVRSLGFPIYVHTGAILPHSKSYWLDDRQHDIWNA*
Ga0049081_10000284413300005581Freshwater LenticADPNQGKDWCWFWDGPIDGNWISEDLLFSRRIRQLGFPIHVHTGAILPHQKSYWLDERHHLSWKE*
Ga0068875_100880323300006018Freshwater LakeMREMADPHQGTDWCWFWDGPVNGTWTGEDLLFSRRVRSLGYPIYVNTAAILPHQKQYWLDERHHDKWQAENG*
Ga0070749_1021601813300006802AqueousAAGTGCLMVHRSVLEAIRDAADPNQGKDWCWFWDGPVKGEWIGEDLLFCRRIKSLGFPIYVNTGAILPHSKSYWLKEEHHDSWRD*
Ga0075464_1007397413300006805AqueousIDAAGTGCLLIHRSVLEKMRETADPSMGKNWCWFWDGPVNGEWIGEDLLFSRRIRSLGFPIYVHTGAILPHQKSYWLDDRHHKSWKD*
Ga0075464_1031160033300006805AqueousVHRSVLEKMREVADPNQGKDWCWFWDGPVNGDWIGEDLLFCRRVKALGFTIHVNTAAVLPHQKSFWMEEIHNDIWQD*
Ga0102689_100060223300007304Freshwater LakeVLIHRSVLEAMRENADPNQGEDWCWFWDGPIDGKWISEDLLFSRRIRQLGFPIYVNTGAVLPHQKSYWLSEEHHLSWRE*
Ga0099851_101429483300007538AqueousDKKSVFEIDAAGTGCLMVHRSVLEKMRENADSNVGEDWCWFWDGPVGGKWIGEDLLFSRRVRALGYPIHVNTGVIIPHQKSYWLDQRHHELWID*
Ga0070751_119471523300007640AqueousLIHRSVLEKMREQADPNQGKDWCWFWDGPIDGNWISEDLLFSRRIRQLGFPIYVHTGAVLPHQKSYWLDERHHNAWKE*
Ga0102859_122092913300007708EstuarineMLVHRSVLEKMREIADPNQGTDWCWFWDGPVNGDWIGEDLLFCRRAKALGFTIHVNTAAILPHQKSFWMEEIHHDTWKD*
Ga0114340_109816043300008107Freshwater, PlanktonQGQDWCWFWDGPINGEWIGEDLQFCRRVRSLGFPIYAHTGAILPHSKSYWLDDRQHDIWNA*
Ga0114340_125481513300008107Freshwater, PlanktonQGKDWCWFWDGPINGEWIGEDLQFCRRVRSLGFPIYAHTGAILPHSKSYWLDDRQHDIWNA*
Ga0114350_113692313300008116Freshwater, PlanktonIQADADPHQGKDWCWFWDGPINGEWIGEDLQFCRRVRSLGFPIYVHTGAILPHSKSYWLDDRQHDIWNS*
Ga0102829_127325733300009026EstuarineIHRSVLEKMRETADPNMGKKWCWFWDGPVNGEWVGEDLLFSRRIRSLGFPIYVNTGAILPHQKSYWLDDRHHKLWKD*
Ga0105098_1047603233300009081Freshwater SedimentHRSVLEKMRETADPNMGKNWCWFWDGPINGEWIGEDLLFSRRIRSLGFPIYVNTGAILPHQKSYWLDDRHHKLWKH*
Ga0105099_1022627333300009082Freshwater SedimentGTGCLLIHRSVLEAIRADADPHQGQDWCWFWDGPINGEWIGEDLQFCRRVRSLGFPIYAHTGAILPHSKSYWLDDRQHDIWNA*
Ga0105103_1037105023300009085Freshwater SedimentSVLEAIRADADPHQGQDWCWFWDGPINGEWIGEDLQFCRRVRSLGFPIYVNTGAILPHSKSYWLDDRQHDIWNA*
Ga0114978_1019894113300009159Freshwater LakeAVFEIDAAGTGCLLVHRSVLEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFCRRAKALGFTIHVNTAAILPHQKSFWMEEIHHDIWKD*
Ga0114978_1032724613300009159Freshwater LakeNADPHQGTDWCWFFDGPINGEWIGEDLLFSRRIRSLGFPIHVNTGAVLPHQKSYWIDERHQDHWK*
Ga0114981_1038247313300009160Freshwater LakeLVHRSVLEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFCRRAKALGFTIHVNTAAILPHQKSFWMEEIHHDI*
Ga0114975_1035013413300009164Freshwater LakeMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFCRRAKALGFTIHVNTAAILPHQKSFWMEEIHHDIWKD*
Ga0105097_1089566013300009169Freshwater SedimentMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGFPIHVNTSVILPHQKSFWLDESHHEAWTD*
Ga0114976_1032964623300009184Freshwater LakeFEIDAAGTGCLLVHRSVLEAMRENADPHQGTDWCWFFDGPINGEWIGEDLLFSRRIRSLGFSIHVNTGVVLPHQKSYWIDERHQDHWK*
Ga0127390_114494213300009474Meromictic PondHRSVLEKMREIADPNQGTEWCWFWDGPVNGDWIGEDLLFCRRAKALGFKIHVNTAAILPHQKSFWMEEIHHDIWKD*
Ga0129333_1031392913300010354Freshwater To Marine Saline GradientCGTGCMLIHRSVLEKMREQADPNQGKDWCWFWDGPIDGNWISEDLLFSRRIRQLGFPIYVHTGAVLPHQKSYWLDERHHNAWKE*
Ga0133913_1052155393300010885Freshwater LakeLMVHRSVLEKMREVADPNQGKDWCWFWDGPVAGEWIGEDLLFCRRAKALGFKIHVNTAAVLPHQKSFWMEEVHNDIWKD*
Ga0157498_104322623300012666Freshwater, Surface IceDPNQGKDWCWFWDGPIKGEWIGEDLLFCRRIKSLGFPIYVNTAAILPHSKSFWLKEEHHELWRD*
Ga0157623_100810923300012707FreshwaterEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD*
Ga0157599_115761323300012715FreshwaterGCLMIHRSVMEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD*
Ga0157616_112708713300012731FreshwaterGCLMIHRSVLEKMCEVADPNQGKDWCWFWDGTVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD*
Ga0164293_1015843713300013004FreshwaterPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGFPIHVNTSVILPHQKSFWLDESHHEAWKD*
Ga0164294_1078737013300013006FreshwaterGTGCLMVHRSVLEKMREVADPNQGKDWCWFWDGPVNGDWIGEDLLFCRRAKALGFTIHVNTAAVLPHQKSFWMEEIHNDIWQD*
(restricted) Ga0172373_1035210523300013131FreshwaterCGTGCMMIHRSVLEKFRQEADPNQGPDWCWFWDGPINGQWISEDLLFSRRIRQLGFPIYVHTGINLPHYKNYWLTEAHHLAWKD*
Ga0177922_1098851933300013372FreshwaterIHRSVLEAMREASDPNQGKDWCWFWDGPIKGEWIGEDLLFCRRIKSLGFPIYVNTAAILPHSKSFWLKEEHHELWRD*
Ga0177922_1128077713300013372FreshwaterKMREMADPHQGTDWCWFWDGPINGEWISEDLLFCRRIRQLGFPIFVNTAVVLPHQKTYWLDERHHIDRQLNKDS*
Ga0180058_102772723300016699FreshwaterLMIHRSVLEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
Ga0181350_116365233300017716Freshwater LakeRETADPSMGKNWCWFWDGPVNGEWIGEDLLFSRRIRSLGFPIYVHTGAILPHQKSYWLDDRHHKLWKN
Ga0181347_116691523300017722Freshwater LakeREAADPNQGTDWCWFWDGPINGEWVSEDLLFCRRIKQLGFPIYANTAAVLPHQKAYWLDERHHLDRHNRTS
Ga0181362_103416413300017723Freshwater LakeMREAADPNQGTDWCWFWDGPINGEWVSEDLLFCRRIKQLGFPIYANTAAVLPHQKAYWLDERHHLDRHNRTS
Ga0181362_105171533300017723Freshwater LakeMRETADPNMGKNWCWFWDGPINGEWIGEDLLFSRRIRSLGFPIYVHTGAILPHQKTYWLDDRHHKSWKN
Ga0181356_1002973113300017761Freshwater LakeHRSVLEKMREVADPNQGTDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
Ga0187842_106976133300018790FreshwaterREVADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
Ga0181359_1000086373300019784Freshwater LakeMREVADPNQGTDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
Ga0194111_1091096523300020083Freshwater LakeMIHRSVLEAIREAADPNQGKDWCWFWDGPIKGEWIGEDLLFCRRIRSLGFPIYVNTAAILPHSKSYWLKEEHHKLWQD
Ga0194112_1036176413300020109Freshwater LakeVFEIDAAGTGCLMIHRSVLEAIREAADPNQGKDWCWFWDGPIKGEWIGEDLLFCRRIRSLGFPIYVNTAAILPHSKSYWLKEEHHKLWQD
Ga0194121_1029989723300020200Freshwater LakeFEIDAAGTGCLMIHRSVLEAIREAADPNQGKDWCWFWDGPIKGAWIGEDLLFCRRIRSLGFPIYVNTAAILPHSKSYWLKEEHHKLWQD
Ga0208231_105564933300020557FreshwaterNMGKNWCWFWDGPINGEWIGEDLLFSRRIRSLGFPIYVNTGAILPHQKSYWLDDRHHKLWKH
Ga0208222_108114613300020566FreshwaterFQVDAAGTGCLLIHRSVLEAIRADADPHQGQDWCWFWDGPIDGIWIGEDLQFCRRVRSLGFPIYVHTGAILPHSKSYWLDDRQHDIWNA
Ga0222716_1016702713300021959Estuarine WaterCLMVHRSVLEAMREAADPNQGKDWCWFWDGPVKGEWIGEDLLFCRRIKSLGFPIYVNTGAILPHSKSYWLKEEHHELWRD
Ga0222714_1034369213300021961Estuarine WaterAAGTGCLLVHRSVLQKMRDNADPNQGTDWCWFWDGPFNGEWVGEDLLFCRRIRALGFPIYVNTSAVLPHQKSYWIDERHHFLWKD
Ga0222714_1049846723300021961Estuarine WaterADPHQGKDWCWFWDGPVKGEWIGEDLLFCRRIKSLGFPIYVNTAAILPHQKSYWLKEEHHDSWRD
Ga0181354_117566913300022190Freshwater LakeRADPNQGTDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
Ga0181351_108725243300022407Freshwater LakeKVFEIDAAGTGCLLIHRSVLEKMRETADSSMGKNWCWFWDGPVNGEWIGEDLLFSRRIRSLGFPIYVHTGAILPHQKSYWLDDRHHKLWKN
Ga0214923_1018813713300023179FreshwaterEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
Ga0244775_1056119113300024346EstuarineTADPSMGKNWCWFWDGPVNGEWIGEDLLFSRRIRSLGFPIYVHTGAILPHQKSYWLDDRHHKLWKD
Ga0255165_100652513300024357FreshwaterSVLEKMREQADPNQGQDWCWFWDGPIEGNWISEDLLFSRRIRQLGFPIYVHTGAVLPHQKSYWLSEEHHLSWKE
Ga0255187_102198723300024510FreshwaterAGTGCLMVHRSVLEAMREAADPNQGKDWCWFWDGPVKGEWIGEDLLFCRRIKSLGFPIYVNTGAILPHSKSYWLKEEHHELWRD
Ga0255236_106622523300024563FreshwaterAVFEIDAAGTGCLMIHRSVLEAMREASDPNQGKDWCWFWDGPIKGEWIGEDLLFCRRIKSLGFPIYVNTAAILPHSKSFWLKEEHHELWRD
Ga0208916_1015979013300025896AqueousAGTGCLLVHRSVLEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFCRRAKALGFTIHVNTAAILPHQKSFWMEEIHHDIWKD
Ga0255083_102871833300027153FreshwaterHRSVLEAIREAADPNQGKDWCWFWDGPINGQWIGEDLLFSRRIRSLGFPIYVNTAAVLPHSKSFWLKEEHHNLWRD
Ga0255204_108683723300027157FreshwaterCLMIHRSVLEAMREASDPNQGKDWCWFWDGPIKGEWIGEDLLFCRRIKSLGFPIYVNTAAILPHSKSFWLKEEHHELWRD
Ga0208133_103905033300027631EstuarineGTGCLMIHRSVLEAMREASDPNQGKDWCWFWDGPIKGEWIGEDLLFCRRIKSLGFPIYVNTAAILPHSKSFWLKEEHHELWRD
Ga0209356_108917313300027644Freshwater LakeVLEKMREVADPNQGTDWCWFWDGPVNGEWIGEDLLFCRRMKALGFRIHVNTAAVLPHQKSFWMEEIHNDIWQD
Ga0208975_103013253300027659Freshwater LenticSVLEAMREAADPNQGKDWCWFWDGPVKGEWIGEDLLFCRRIKSLGFPIYVNTGAILPHSKSYWLKEEHHELWRD
Ga0209599_1016175713300027710Deep SubsurfaceREVADPNQGKDWCWFWDGPVNGEWIGEDLLFCRRAKALGFTIHVNTAAILPHQKSFWMEEIHHDIWKD
Ga0209079_1009447213300027972Freshwater SedimentSVLEAIRADADPHQGQDWCWFWDGPINGEWIGEDLQFCRRVRSLGFPIYVNTGAILPHSKSYWLDDRQHDIWNA
Ga0247723_104189333300028025Deep Subsurface SedimentGCLMIHRSVLEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
(restricted) Ga0247831_125074723300028559FreshwaterSVLEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
Ga0315900_1074987023300031787FreshwaterGCLMVHRSVLEAMREAADPNQGKDWCWFWDGPVKGEWIGEDLLFCRRIKSLGFPIYVNTAAILPHSKSYWLKEEHHELWRD
Ga0315909_1052107933300031857FreshwaterAVFEIDAAGTGCLLVHRSVLEKMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFCRRAKALGFTIHVNTAAILPHQKSFWMEEIHHDIWKD
Ga0315901_1030828933300031963FreshwaterTGCLMVHRSVLEAMRDAADPNQGKDWCWFWDGPVNGEWIGEDLLFCRRIKSLGFPIHVNTAAILPHSKNYWLKEEHHDSWRD
Ga0315901_1102739433300031963FreshwaterIHRSVLEAIQADADPHQGKDWCWFWDGPINGEWIGEDLQFCRRIRSLGFPIYVHTGAILPHSKSYWLDDRQHDIWNS
Ga0315906_1029298043300032050FreshwaterGTGCILVHRSVLEKMRETADPNQGTNWCWFWDGPINGEWISEDLLFCRKIKHLGFPIYANTGAILPHQKRYWLHEGHHTERQNNENI
Ga0315906_1033659043300032050FreshwaterHQGTDWCWFWDGPLNGEWISEDLLFSRRIRQLGFSIHVNTAAILPHQKSYWLDERHHIDWQLNENS
Ga0315902_1073819013300032093FreshwaterILVHRSVLEKMRETADPNQGTNWCWFWDGPINGEWISEDLLFCRKIKHLGFPIYANTGAILPHQKRYWLHEGHHTERQNNENI
Ga0334981_0357851_3_2783300033980FreshwaterAVFEIDAAGTGCLMVHRSVLEAMREAADPNQGKDWCWFWDGPVKGEWIGEDLLFCRRIKSLGFPIYVNTGAILPHSKSYWLKEEHHELWRD
Ga0334979_0397595_538_7473300033996FreshwaterMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
Ga0310131_085199_367_5793300033997Fracking WaterDEADPNQGKDWCWFWDGPINGDWIGEDLLFCRRLRAMGVPITVNSSVILPHQKSFWMQEVHNDIWQNRKD
Ga0335021_0444228_19_2403300034023FreshwaterVLEKMREEADPNQGKDWCWFWDGPIDGNWISEDLLFSRRVRQLGFPIHVHTGAILPHQKSYWLDERHHLSWKE
Ga0334995_0410337_38_2563300034062FreshwaterMRDEADPNQGKDWCWFWDGPVNGNWVGEDLLFSRRIRQMGISITVNSSVILPHQKSFWMQEVHNDIWQNRKD
Ga0335019_0622978_368_5773300034066FreshwaterMREVADPNQGQDWCWFWDGPVAGEWIGEDLLFCRRAKALGFKIHVNTAAVLPHQKTFWMDEIHNDIWKD
Ga0335036_0006148_1_1983300034106FreshwaterADPNQGKDWCWFWDGPVNGEWIGEDLLFSRRIKSLGYPIHVNTSVILPHQKSFWLDESHHEAWKD
Ga0335036_0150190_45_2543300034106FreshwaterMREVADPNQGTDWCWFWDGPVNGDWIGEDLLFCRRAKALGFKIHVNTAAILPHQKSFWMEEIHHDIWKD
Ga0335051_0042525_214_4233300034109FreshwaterMRETADPSMGKNWCWFWDGPVNGEWIGEDLLFSRRIRSLGFPIYVNTGAILPHQKSYWLDDRHHKLWKH
Ga0335068_0037380_122_3733300034116FreshwaterMLVHRSVLEKMREAADPNQGTDWCWFWDGPINGEWISEDLLFCRRIRQLGFPIYANTAAILPHQKTYWLDERHHIDRQLNKDS
Ga0335053_0117860_1547_17683300034118FreshwaterVLEKMREEADPNQGKDWCWFWDGPIDGNWISEDLLFSRRVRQLGFPIYVHTGAILPHQKSYWLDERHHLSWKE
Ga0335053_0410932_33_2423300034118FreshwaterMREVADPNQGKDWCWFWDGPVNGEWIGEDLLFCRRAKALGFTIHVNTAAILPHQKSFWMEEIHHDIWKD
Ga0335056_0564849_329_5653300034120FreshwaterMIHRSVLEAMREASDPNQGKDWCWFWDGPIKGEWIGEDLLFCRRIKSLGFPIYVNTAAILPHSKSFWLKEEHHELWRD
Ga0335060_0016979_41_2773300034122FreshwaterMVHRSVLEKMREVADPNQGKDWCWFWDGPVAGEWIGEDLLFCRRAKALGFKIHVNTAAVLPHQKSFWMEEVHNDIWKD
Ga0335065_0029239_3665_38743300034200FreshwaterMRETADKNQGPDWCWFWDGPVDGNWIGEDLLFCRRIRALGFPIYVNTGAILPHQKSYWLDERHHQLWKD
Ga0348337_138839_3_2423300034418AqueousMLIHRSVLEKMREQADPNQGKDWCWFWDGPIDGNWISEDLLFSRRIRQLGFPIYVHTGAVLPHQKSYWLDERHHNAWKE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.