NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F104765

Metagenome Family F104765

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104765
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 61 residues
Representative Sequence MNALEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR
Number of Associated Samples 60
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 83.00 %
% of genes near scaffold ends (potentially truncated) 22.00 %
% of genes from short scaffolds (< 2000 bps) 76.00 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (62.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(21.000 % of family members)
Environment Ontology (ENVO) Unclassified
(52.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(38.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 74.19%    β-sheet: 0.00%    Coil/Unstructured: 25.81%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF12684DUF3799 57.00
PF00805Pentapeptide 4.00
PF03796DnaB_C 4.00
PF02511Thy1 2.00
PF13550Phage-tail_3 1.00
PF13392HNH_3 1.00
PF07120DUF1376 1.00
PF06199Phage_tail_2 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 4.00
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 4.00
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 4.00
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 2.00
COG3756Uncharacterized conserved protein YdaU, DUF1376 familyFunction unknown [S] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A62.00 %
All OrganismsrootAll Organisms38.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002203|metazooDRAFT_1273275Not Available501Open in IMG/M
3300002408|B570J29032_109609036Not Available932Open in IMG/M
3300004112|Ga0065166_10215223Not Available761Open in IMG/M
3300005582|Ga0049080_10288134Not Available531Open in IMG/M
3300005662|Ga0078894_10008324All Organisms → cellular organisms → Bacteria8083Open in IMG/M
3300005805|Ga0079957_1040985All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae2937Open in IMG/M
3300005805|Ga0079957_1057867All Organisms → cellular organisms → Bacteria2324Open in IMG/M
3300005805|Ga0079957_1064006All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae2162Open in IMG/M
3300005805|Ga0079957_1074886All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1939Open in IMG/M
3300005805|Ga0079957_1217368Not Available909Open in IMG/M
3300006802|Ga0070749_10248366Not Available1008Open in IMG/M
3300006802|Ga0070749_10318332Not Available869Open in IMG/M
3300006805|Ga0075464_10307266Not Available955Open in IMG/M
3300006805|Ga0075464_10355876Not Available886Open in IMG/M
3300006863|Ga0075459_1059209Not Available647Open in IMG/M
3300006875|Ga0075473_10262886Not Available698Open in IMG/M
3300006875|Ga0075473_10286327Not Available667Open in IMG/M
3300007363|Ga0075458_10008221All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae3339Open in IMG/M
3300007640|Ga0070751_1271097Not Available639Open in IMG/M
3300008107|Ga0114340_1002091All Organisms → cellular organisms → Bacteria19352Open in IMG/M
3300008266|Ga0114363_1064194Not Available1416Open in IMG/M
3300008266|Ga0114363_1106877Not Available997Open in IMG/M
3300008450|Ga0114880_1058056All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1610Open in IMG/M
3300008450|Ga0114880_1133116Not Available918Open in IMG/M
3300009169|Ga0105097_10002312All Organisms → cellular organisms → Bacteria9358Open in IMG/M
3300010354|Ga0129333_10002789All Organisms → cellular organisms → Bacteria16318Open in IMG/M
3300010354|Ga0129333_10010087All Organisms → cellular organisms → Bacteria8930Open in IMG/M
3300010354|Ga0129333_10088764All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2860Open in IMG/M
3300010354|Ga0129333_10265434All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1544Open in IMG/M
3300010354|Ga0129333_10489410Not Available1079Open in IMG/M
3300010354|Ga0129333_10570561Not Available985Open in IMG/M
3300010354|Ga0129333_11365533Not Available584Open in IMG/M
3300012017|Ga0153801_1056598Not Available689Open in IMG/M
3300013004|Ga0164293_10300356All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1113Open in IMG/M
3300017707|Ga0181363_1042415Not Available832Open in IMG/M
3300017736|Ga0181365_1164854Not Available521Open in IMG/M
3300017747|Ga0181352_1150741Not Available615Open in IMG/M
3300017754|Ga0181344_1001264All Organisms → cellular organisms → Bacteria9383Open in IMG/M
3300017754|Ga0181344_1033740Not Available1560Open in IMG/M
3300017754|Ga0181344_1176137Not Available605Open in IMG/M
3300017766|Ga0181343_1140132Not Available676Open in IMG/M
3300017785|Ga0181355_1152846All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae931Open in IMG/M
3300017785|Ga0181355_1381398Not Available513Open in IMG/M
3300019784|Ga0181359_1088015Not Available1155Open in IMG/M
3300019784|Ga0181359_1172281Not Available723Open in IMG/M
3300020048|Ga0207193_1370946All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae968Open in IMG/M
3300020048|Ga0207193_1534372All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300020498|Ga0208050_1000282All Organisms → cellular organisms → Bacteria8991Open in IMG/M
3300021963|Ga0222712_10430544Not Available795Open in IMG/M
3300022179|Ga0181353_1008076Not Available2583Open in IMG/M
3300022179|Ga0181353_1032056All Organisms → Viruses → Predicted Viral1393Open in IMG/M
3300022179|Ga0181353_1032121Not Available1391Open in IMG/M
3300022179|Ga0181353_1064968Not Available940Open in IMG/M
3300022407|Ga0181351_1077795All Organisms → Viruses → Predicted Viral1329Open in IMG/M
3300025585|Ga0208546_1097895Not Available659Open in IMG/M
3300025848|Ga0208005_1000282All Organisms → cellular organisms → Bacteria20491Open in IMG/M
3300025872|Ga0208783_10152556Not Available980Open in IMG/M
3300025896|Ga0208916_10179520Not Available914Open in IMG/M
3300025896|Ga0208916_10305901Not Available692Open in IMG/M
3300027721|Ga0209492_1004807All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae4393Open in IMG/M
3300027805|Ga0209229_10057390All Organisms → Viruses → Predicted Viral1738Open in IMG/M
3300027805|Ga0209229_10222488Not Available843Open in IMG/M
3300027899|Ga0209668_10626191Not Available720Open in IMG/M
3300027900|Ga0209253_10606247Not Available803Open in IMG/M
3300031758|Ga0315907_10329513All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1247Open in IMG/M
3300031787|Ga0315900_10041476Not Available4966Open in IMG/M
3300031787|Ga0315900_10867532Not Available612Open in IMG/M
3300031857|Ga0315909_10336501All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300031857|Ga0315909_10568557Not Available765Open in IMG/M
3300031951|Ga0315904_10081089All Organisms → cellular organisms → Bacteria → Proteobacteria3474Open in IMG/M
3300031951|Ga0315904_10479792Not Available1103Open in IMG/M
3300031951|Ga0315904_10568177Not Available984Open in IMG/M
3300031951|Ga0315904_11309381Not Available547Open in IMG/M
3300032093|Ga0315902_10569245Not Available962Open in IMG/M
3300032116|Ga0315903_10173022All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter → Luteolibacter yonseiensis1953Open in IMG/M
3300032116|Ga0315903_10180880All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1897Open in IMG/M
3300032116|Ga0315903_11147527Not Available529Open in IMG/M
3300033418|Ga0316625_102585535Not Available515Open in IMG/M
3300033521|Ga0316616_101713746Not Available823Open in IMG/M
3300033557|Ga0316617_101533314Not Available673Open in IMG/M
3300033816|Ga0334980_0021208All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae2788Open in IMG/M
3300033816|Ga0334980_0045275Not Available1867Open in IMG/M
3300033981|Ga0334982_0058729All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae2107Open in IMG/M
3300033981|Ga0334982_0108994Not Available1451Open in IMG/M
3300033993|Ga0334994_0163041Not Available1241Open in IMG/M
3300033993|Ga0334994_0526248Not Available544Open in IMG/M
3300034012|Ga0334986_0130785All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1469Open in IMG/M
3300034019|Ga0334998_0056078All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae2728Open in IMG/M
3300034062|Ga0334995_0154561All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1651Open in IMG/M
3300034062|Ga0334995_0244677Not Available1212Open in IMG/M
3300034062|Ga0334995_0403947Not Available854Open in IMG/M
3300034063|Ga0335000_0033248All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3787Open in IMG/M
3300034092|Ga0335010_0454508Not Available685Open in IMG/M
3300034101|Ga0335027_0032447All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae4346Open in IMG/M
3300034101|Ga0335027_0145198Not Available1748Open in IMG/M
3300034101|Ga0335027_0240132All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1259Open in IMG/M
3300034106|Ga0335036_0019603All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae5452Open in IMG/M
3300034106|Ga0335036_0088554Not Available2291Open in IMG/M
3300034118|Ga0335053_0743182Not Available547Open in IMG/M
3300034283|Ga0335007_0533917Not Available695Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater21.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake18.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous14.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater13.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient7.00%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake5.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton3.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.00%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment2.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment2.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.00%
LakeEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater1.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002203Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAR 2013EnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006863Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNAEnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300012017Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020498Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300025585Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025848Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025872Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034019Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034063Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053EnvironmentalOpen in IMG/M
3300034092Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034118Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
metazooDRAFT_127327533300002203LakeVSPLEIFALGAIMLCAGISLGFLWGLRNGERLGRDREWMDSFFRSIKRDAERRDKAGRFKKR*
B570J29032_10960903643300002408FreshwaterMNALEIFALGAIMLCAGISLGFLWGLKNGERLGRDREWMDSFFLNIKRDAERRDKCGRFKKR*
Ga0065166_1021522323300004112Freshwater LakeMKAAEIIAICSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFRSIKRDRDRRD
Ga0049080_1028813433300005582Freshwater LenticMNALEIFALGAIMLCAGVSIGFLWGLKNGERLGRDREWMDSFFRSIKRDAERRDSNGRFKKR*
Ga0078894_1000832453300005662Freshwater LakeMKAAEIIAICSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFRSIKRDRDRRDKQGRFKK*
Ga0079957_104098553300005805LakeMNGLEIFALGAIMLCAGVSVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKAGRFKKR*
Ga0079957_105786743300005805LakeMNALEIFALGAIMFCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKAGRFKKR*
Ga0079957_106400633300005805LakeMNALEIFALGAIMLCAGISLGFLWGLRNGERIGRDREWMDSFFRSIKRDAERRDKCGRFKKR*
Ga0079957_107488623300005805LakeMKPAEIIAICSIMLCAGIGGGFFWGLRQGERIGRDREWMDSFFRSIKRDAERRDKAGRFKKR*
Ga0079957_121736813300005805LakeMNALEIFALGAIMLCAGVSVGFLWGLKNGERLGRDREWMDSFFRNIKKDAERRDKAGRFK
Ga0070749_1024836633300006802AqueousVNALEICALGAIMLCAGISLGFLWGLKNGERLGREREWMDSFFRSIKRDAERRDSNGRFKKR*
Ga0070749_1031833233300006802AqueousMKAAEIIAICSIMLCAGIGAGFLWGLRQGERLGRDREWMDSFFRNIKRDAERRDKCGRFKKR*
Ga0075464_1030726633300006805AqueousMKAAEIIAICSIMLCAGIGAGFLWGLRQGERLGRDREWMDSFFRSIKRDAERRDSNGRFKKR*
Ga0075464_1035587623300006805AqueousMTTEIIAVCALLLSAGIGAGFLWGLRQGERIGRDREWMDSFFRNIKKDAERRDKAGRFKKR*
Ga0075459_105920923300006863AqueousMNALEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR*
Ga0075473_1026288613300006875AqueousMKAAEIIAICSIMLSAGIGAGFFWGLRQGERIGRDREWMDSFFRSIKRDAERRD
Ga0075473_1028632733300006875AqueousTDKEATMKAEIIAICAILLSAGIGAGFLWGLRQGERLGRDREWMDSFFRSIKRDRERRDSNGRFKK*
Ga0075458_1000822163300007363AqueousMKAAEIIAICSIMLSAGIGAGFFWGLRQGERIGRDREWMDSFFRSIKRDAERRDKAGRFKKR*
Ga0070751_127109723300007640AqueousMKAAEIIAICSIMLCAGIGGGFFWGLRQGERIGRDREWMDSFFRSIKRDAERRDKCGRFKKR*
Ga0114340_1002091273300008107Freshwater, PlanktonMNALEIFALCAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR*
Ga0114363_106419443300008266Freshwater, PlanktonMNALEIFALGAIMFCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKCGRFKKR*
Ga0114363_110687733300008266Freshwater, PlanktonMNALEIFALGAIMFCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR*
Ga0114880_105805623300008450Freshwater LakeMNALEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKCGRFKKR*
Ga0114880_113311643300008450Freshwater LakeFALGAIMFCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR*
Ga0105097_10002312163300009169Freshwater SedimentMKAAEIIAICSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFLNIKRDAERRDKCGRFKKR*
Ga0129333_10002789113300010354Freshwater To Marine Saline GradientMNSLEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKAGRFKKR*
Ga0129333_1001008783300010354Freshwater To Marine Saline GradientMNALEIFALGAIMLCAGISLGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKCGRFKKR*
Ga0129333_1008876463300010354Freshwater To Marine Saline GradientMNALEIFALGAIMFCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKCGRFKKR*
Ga0129333_1026543443300010354Freshwater To Marine Saline GradientMNALEIFALGAIMFCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKCGRFKRR*
Ga0129333_1048941023300010354Freshwater To Marine Saline GradientMNALEIFALGAIMLCAGISLGFLWGLRNGERLGRDREWMDSFFRSIKRDAERRDKCGRFKKR*
Ga0129333_1057056133300010354Freshwater To Marine Saline GradientMSALEIFALGAIMLCAGISVGFLWGLKNGERLGRDREWMDSFFRNIKKEAERRDKAGRFKKR*
Ga0129333_1136553323300010354Freshwater To Marine Saline GradientMNALEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDSERRDKCGRFKKR*
Ga0153801_105659833300012017FreshwaterMKAAEIIAICSIMLCAGIGAGFFWGLRQGERIGRDREWMDSFFRSIKRDRERRDKCGRFKKR*
Ga0164293_1030035643300013004FreshwaterFALGAIMLCAGISLGFLWGLKNGERLGRDREWMDSFFLNIKRDAERRDKCGRFKKR*
Ga0181363_104241523300017707Freshwater LakeMKAEIIAVCAILLSAGIGAGFFWGLRQGERLGRDREWMDSFFRNIKRDAERRDKAGRFKK
Ga0181365_116485423300017736Freshwater LakeMNALEIFALGAIMLCAGISLGFLWGLRNGERLGRDREWMDSFFLNIKRDAERRDKCGRFKKR
Ga0181352_115074113300017747Freshwater LakeMKAAEIIAICSIMLCAGIGAGFFWGLRQGERIGRDREWMDSFFRNIKRDAERRDKCGRFKKR
Ga0181344_1001264123300017754Freshwater LakeMKAAEIIAICSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFRSIKRDRDRRDKQGRFK
Ga0181344_103374043300017754Freshwater LakeMKAEIIAVCAILLSAGIGAGFFWGLRQGERIGRDREWMDSFFRNIKRDADRRDKQGRFKK
Ga0181344_117613713300017754Freshwater LakeMKAAEIIAICSIMLSAGIGAGFFWGLRQGERIGRDREWMDSFFRSIKRDRERRDKTGRFKKR
Ga0181343_114013213300017766Freshwater LakeMKAEMIAVCAILLSAGIGAGFLWGLRQGERLGRDREWMDSFFRSIKRDRERRDKAGRFKK
Ga0181355_115284633300017785Freshwater LakeVNALEIFALGAIMLCAGISVGFLWGLKNGERLGRDREWMDSFFRSIKRDAERRDS
Ga0181355_138139833300017785Freshwater LakeMKDAEIIAICSIMLCAGIGAGFFWGLCQGERIGRDREWMDSFFLNIKRDRERRDKAGRFKKR
Ga0181359_108801543300019784Freshwater LakeMKDAEIIAICSIMLCAGIGAGFFWGLCQGERIGRDREWMDSFFRNIKKDAERRDKAGRFKKR
Ga0181359_117228133300019784Freshwater LakeMKAEIIAVCAILLSAGIGAGFLWGLRQGERIGRDREWMDSFFRSIKRDR
Ga0207193_137094633300020048Freshwater Lake SedimentMNALEIFALGAIMLCSGISLGFLWGLRNGERIGRDREWMDSFFRNIKRDAERRDKCGRFKKR
Ga0207193_153437223300020048Freshwater Lake SedimentMNALEIFALGAIMLCAGVSIGFLWGLKNGERLGRDREWMDSFFRSIKRDAERRDSNGRFKKR
Ga0208050_1000282103300020498FreshwaterMKAAEIIAICSIMLSAGIGAGFFWGLRQGERIGRDREWMDSFFRSIKRDAERRDKAGRFKKR
Ga0222712_1043054443300021963Estuarine WaterMNAPEIFALGAIMLCAGISVGFLWGLKNGERLGRDREWMDSFFRNIKKDAERRDKAGRFKKR
Ga0181353_100807653300022179Freshwater LakeKAEIIAVCAILLSAGIGAGFFWGLRQGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR
Ga0181353_103205643300022179Freshwater LakeKAAEIIAICSIMLCAGIGAGFFWGLRQGERIGRDREWMDSFFRNIKKDAERRDKAGRFKK
Ga0181353_103212123300022179Freshwater LakeMNALEIFALGAIMLCAGISLGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKCGRFKKR
Ga0181353_106496823300022179Freshwater LakeMNALEIFALGAMMLCAGVSVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKAGRFKKR
Ga0181351_107779543300022407Freshwater LakeMKAEIIAVCAILLSAGIGAGFVWGLRQGERIGRDREWMDSFFRSIKRDRERRDSNGRFKK
Ga0208546_109789533300025585AqueousMKAEIIAICAILLSAGIGAGFLWGLRQGERLGRDREWMDSFFRSIKRDRERRDSNGRFKK
Ga0208005_1000282113300025848AqueousMGKGATMKAEIIAVCAILLSAGIGAGFLWGLRQGERIGRDREWMDSFFRSIKRDRERRDSNGRFKK
Ga0208783_1015255633300025872AqueousMKAEIIAVCAILLSAGIGAGFLWGLRQGERIGRDREWMDSFFRSIKRDRERRDSNGRFKK
Ga0208916_1017952023300025896AqueousMKAAEIIAICSIMLCAGIGAGFLWGLRQGERLGRDREWMDSFFRSIKRDAERRDSNGRFKKR
Ga0208916_1030590133300025896AqueousMTTEIIAVCALLLSAGIGAGFLWGLRQGERIGRDREWMDSFFRNIKKDAERRDKAGRFKK
Ga0209492_100480743300027721Freshwater SedimentMKAAEIIAICSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFLNIKRDAERRDKCGRFKKR
Ga0209229_1005739043300027805Freshwater And SedimentMKAAEIIAICSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFRNIKRDAERRDKCGRFKKR
Ga0209229_1022248823300027805Freshwater And SedimentMNALEIFALGAIMLCAGISLGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKRGRFKKR
Ga0209668_1062619113300027899Freshwater Lake SedimentMNALEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRD
Ga0209253_1060624743300027900Freshwater Lake SedimentMKAEIIAVCAILLSAGIGAGFFWGLRQGERIGRDREWMDSFFRSIKRDAERRDKCGRFKK
Ga0315907_1032951333300031758FreshwaterMNALEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKCGRFKKR
Ga0315900_1004147673300031787FreshwaterMNALEIFALCAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR
Ga0315900_1086753233300031787FreshwaterIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR
Ga0315909_1033650133300031857FreshwaterMKAAEIIAICSIMLCAGIGAGFFWGLRQGERIGRDREWMDSFFRNIKKDAERRDKAGRFKKR
Ga0315909_1056855713300031857FreshwaterMNALEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKKDAE
Ga0315904_1008108973300031951FreshwaterMNALEIFALGAIMFCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR
Ga0315904_1047979243300031951FreshwaterMNALEIFALGAIMLCAGISVGFLWGLRNGERIGRDREWMDSFFRNIKKDAERRDKCGRFKKR
Ga0315904_1056817723300031951FreshwaterMNALEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR
Ga0315904_1130938123300031951FreshwaterMNALEIFALGAIMFCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKAGRFKKR
Ga0315902_1056924533300032093FreshwaterMNALEIFALCAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKAGRFKKR
Ga0315903_1017302213300032116FreshwaterLGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKKDAERRDKAGRFKKR
Ga0315903_1018088013300032116FreshwaterMNALEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGR
Ga0315903_1114752733300032116FreshwaterAIMFCAGISVGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR
Ga0316625_10258553533300033418SoilMKAAEIIAICSIMLSAGIGAGFFWGLRQGERIGHDREWMDSFFRSLKRDAERRDSNGRFKKR
Ga0316616_10171374613300033521SoilLEIFALGAIMLCAGISVGFLWGLRNGERLGRDREWMDSFFRSLKRDAERRDSNGRFKKR
Ga0316617_10153331433300033557SoilMKAAEIIAICSIMLCAGIGAGFFWGLRQGERIGRDREWMDSFFRSLKRDAERRDSNGRFKKR
Ga0334980_0021208_2440_26283300033816FreshwaterMNALEIFALGAIMLCAGISLGFLWGLRNGERIGRDREWMDSFFRNIKRDAERRDKAGRFKKR
Ga0334980_0045275_367_5523300033816FreshwaterMKAEIIAVCAILLSAGIGAGFFWGLRQGERIGRDREWMDSFFLNIKRDAERRDKCGRFKK
Ga0334982_0058729_1706_18943300033981FreshwaterMNALEIFALGAIMLCAGISLGFLWGLKNGERLGRDREWMDSFFLNIKRDAERRDKCGRFKKR
Ga0334982_0108994_642_8303300033981FreshwaterMNALEIFALGAIMLCAGISLGFLWGLRNGERLGRDREWMDSFFLNIKRDAERRDKAGRFKKR
Ga0334994_0163041_1060_12393300033993FreshwaterLEIFALGAIMLCAGISLGFLWGLRNGERLGRDREWMDSFFLNIKRDAERRDKCGRFKKR
Ga0334994_0526248_203_4033300033993FreshwaterMKAAEIIAICSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFRSIKRDRDRRDKQGRFKNERRTR
Ga0334986_0130785_531_7193300034012FreshwaterMSALEIFALGAIMLCAGISLGFLWGLRQGERLGRDREWMDSFFLNIKRDAERRDKAGRFKKR
Ga0334998_0056078_934_11223300034019FreshwaterMNALEIFALGAIMLCSGISLGFLWGLRNGERLGRDREWMDSFFRNIKRDAERRDKCGRFKKR
Ga0334995_0154561_1210_13983300034062FreshwaterMNALEIFALGAIMLCAGISVGFLWGLRNGERIGRDREWMDSFFRSIKRDAERRDKAGRFKKR
Ga0334995_0244677_900_10883300034062FreshwaterMKAAEIIAICSIMLSAGIGAGFFWGLRQGERIGRDREWMDSFFRSIKRDAERRDKCGRFKKR
Ga0334995_0403947_666_8543300034062FreshwaterMKAAEIIAICSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFRSIKRDRDRRDKQGRFKNER
Ga0335000_0033248_3590_37783300034063FreshwaterVSALEIFALGAIMLCAGISLGFLWGLRNGERLGRDREWMYSFFLNIKRDAERRDKCGRFKKR
Ga0335010_0454508_112_3003300034092FreshwaterMNALEIFALGAIMLCAGISLGFLWGLKNGERLGRDREWMDSFFLNIKRDAERRDKAGRFKKR
Ga0335027_0032447_3782_39703300034101FreshwaterMKAAEIIAVCSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFRNIKRDAERRDKCGRFKKR
Ga0335027_0145198_1257_14453300034101FreshwaterMKAAEIIAICSIMLSAGIGAGFFWGLRQGERLGRDREWMDSFFRSIKRDAERRDKAGRFKKR
Ga0335027_0240132_654_8423300034101FreshwaterVSALEIFALGAIMLCSGISLGFLWGLRNGERLGRDREWMDSFFLNIKRDSERRDKCGRFKKR
Ga0335036_0019603_4388_45763300034106FreshwaterMKAAEIIAICSIMLSAGIGAGFFWGLRQGERIGRDREWMDSFFRNIKRDAERRDKCGRFKKR
Ga0335036_0088554_202_3903300034106FreshwaterMNALEIFALGAIMLCAGVSVGFLWGLKNGERLGRDREWMDSFFRNIKRDAERRDKAGRFKKR
Ga0335053_0743182_366_5453300034118FreshwaterAEIIAVCAILLSAGIGAGFFWGLRQGERIGRDREWMDSFFRSIKRDAERRDKCGRFKKR
Ga0335007_0533917_326_5143300034283FreshwaterMKAAEIIAICSIMLSAGIGAGFFWGLRNGERIGRDREWMDSFFRSIKRDAERRDKCGRFKKR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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