Metagenome / Metatranscriptome Family F104755

Basic Information
Family ID	F104755
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	46 residues
Representative Sequence	VFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Number of Associated Samples	89
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	3.00 %
% of genes from short scaffolds (< 2000 bps)	3.00 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (99.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (22.000 % of family members)
Environment Ontology (ENVO)	Unclassified (63.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 55.56% Coil/Unstructured: 44.44%
Feature Viewer

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
All Organisms	root	All Organisms	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
cellular organisms	root	All Organisms → cellular organisms	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300009068\|Ga0114973_10558640	Not Available	589	Open in IMG/M
3300020542\|Ga0208857_1041954	Not Available	711	Open in IMG/M
3300027147\|Ga0255113_1040332	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.00%
Terrestrial	Environmental → Terrestrial	1.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	89.00%
Marine	Environmental → Aquatic → Marine	10.00%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.00%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	42.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.00%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	8.00%
Coastal	Environmental → Aquatic → Marine → Coastal	7.00%
River	Environmental → Aquatic → Freshwater → River	4.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.00%
Creek	Environmental → Aquatic → Freshwater → Creek	1.00%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.00%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	35.00%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	26.00%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	8.00%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	7.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.00%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.00%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.00%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	1.00%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.00%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.00%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.00%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	22.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	17.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	11.00%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	8.00%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	7.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.00%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.00%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.00%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.00%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.00%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.00%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.00%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	1.00%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.00%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.00%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.00%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.00%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.00%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.00%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002371	Freshwater microbial communities from Lake Mendota, WI - 09NOV2012 deep hole epilimnion	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007162	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300012763	Freshwater microbial communities from Lake Simoncouche, Canada - S_140108_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300019783	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020529	Freshwater microbial communities from Lake Mendota, WI - 07SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020533	Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020542	Freshwater microbial communities from Lake Mendota, WI - 05NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022747	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300024276	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_8d	Environmental	Open in IMG/M
3300024512	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_0h	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027147	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027157	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepC_8h	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027642	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027730 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8m	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028553 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_16m	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_101649042	3300000756	Freshwater And Sediment	DKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
B570J29602_10056771	3300002371	Freshwater	KNVEQKREFRSAKFDDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG*
JGI25909J50240_11069171	3300003393	Freshwater Lake	NVEQKREFRSAKFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG*
JGI25912J50252_100743211	3300003412	Freshwater Lake	EKNKEQKMVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG*
JGI25914J50564_101780891	3300003429	Freshwater Lake	EQKREFRSAKFDDKSKVWNTTKGETVLTYFDLDRNGYRTAKNFTITLKG*
Ga0049083_102333321	3300005580	Freshwater Lentic	VFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG*
Ga0049083_102587552	3300005580	Freshwater Lentic	DDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0049081_102742931	3300005581	Freshwater Lentic	EQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG*
Ga0070749_103936451	3300006802	Aqueous	RRSALFDDKSKVWTTTKGDTVLTYFDLERNGYRTAKNFIITLKG*
Ga0075464_105013131	3300006805	Aqueous	RSALFDDKSKVWTTSKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0070748_12891531	3300006920	Aqueous	INKEKNTEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0079300_101639501	3300007162	Deep Subsurface	QKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0102897_10987341	3300007617	Estuarine	RSAKFDDKSKVWNTTKGETVLTYFDLDRNGYRTAKNFTITLKG*
Ga0105745_12779291	3300007972	Estuary Water	VRRTAIFDEKSRVFTTTKGETALVYFDLERNGYRTAKNFIITLKG*
Ga0114346_12320343	3300008113	Freshwater, Plankton	KFDDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG*
Ga0114364_10511441	3300008267	Freshwater, Plankton	FDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0114364_11476351	3300008267	Freshwater, Plankton	FDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG*
Ga0114880_11138781	3300008450	Freshwater Lake	KIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFIITLKG*
Ga0114880_12401861	3300008450	Freshwater Lake	KSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0114973_105586401	3300009068	Freshwater Lake	INGEKNVEQKREFRSAKFDDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG*
Ga0114968_106708511	3300009155	Freshwater Lake	ALFDDKSKVWTTSKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0114978_108334512	3300009159	Freshwater Lake	VFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0114966_102705801	3300009161	Freshwater Lake	KIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0114966_106617991	3300009161	Freshwater Lake	ALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0114970_102058681	3300009163	Freshwater Lake	NVEQKMEFRSALFDDKSKVWTTSKGETVLTYFDLDRNGYRCAKNFTINLKG*
Ga0114969_107398741	3300009181	Freshwater Lake	TIDKEKNKEQKMVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG*
Ga0115546_11330164	3300009435	Pelagic Marine	DDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG*
Ga0114967_105836531	3300010160	Freshwater Lake	SKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG*
Ga0129336_106902601	3300010370	Freshwater To Marine Saline Gradient	TEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0138289_11516901	3300012763	Freshwater Lake	NGEKNTETKIVRRSALFDDKSKVWTTSKGETVLTYFDLERNGYRTAKNFTITLRG*
Ga0164293_104903561	3300013004	Freshwater	KNKEQKMVFRSALFDDKSKVCTTTKGETVLTYFDLERNGYRTAKNFTITLRG*
(restricted) Ga0172367_105998981	3300013126	Freshwater	TAVFDEKSRVFTTTKGETALVYFDVERNGYRTAKNFIITLRG*
(restricted) Ga0172372_107839071	3300013132	Freshwater	RTAVFDEKSRVFTTTKGETALVYFDVERNGYRTAKNFIITLRG*
Ga0177922_106444551	3300013372	Freshwater	KVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG*
(restricted) Ga0172376_106218292	3300014720	Freshwater	SALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG*
Ga0181364_10335401	3300017701	Freshwater Lake	INGEKNTDTKTIRRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFITTVKQ
Ga0181364_10510253	3300017701	Freshwater Lake	FDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0181350_11237811	3300017716	Freshwater Lake	ALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0181347_11350071	3300017722	Freshwater Lake	MVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTLTLRG
Ga0181356_12030121	3300017761	Freshwater Lake	QENTKTEVVRRTAVFDEKSRVFTTTKGETALVYFDLERNGYRTAKNFIITLKG
Ga0181356_12367542	3300017761	Freshwater Lake	DEKSRVFTTTKGETALVYFDLERNGYRTAKNFIITLKG
Ga0181349_11970303	3300017778	Freshwater Lake	DKSKVWTTTKGETVLTYFDLDRNGYRTAKNFIITLKG
Ga0181346_12670891	3300017780	Freshwater Lake	VVRRTAVFDEKSRVFTTTKGETALVYFDLERNGYRTAKNFIITLKG
Ga0181348_12810621	3300017784	Freshwater Lake	RSAKFDDKSKVFTTSKGDVALTYFDLDRNGYRTAKNFTITLKG
Ga0181361_1087531	3300019783	Freshwater Lake	RFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0181361_1103593	3300019783	Freshwater Lake	SKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0181359_12401911	3300019784	Freshwater Lake	KNTDTKTIRRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFIITLKQ
Ga0211729_111423951	3300020172	Freshwater	KNTEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0208091_10345012	3300020506	Freshwater	KNTEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0208233_10348543	3300020529	Freshwater	AKFDDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG
Ga0208364_10245723	3300020533	Freshwater	SALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0208857_10419541	3300020542	Freshwater	IDGEKNVEQKREFRSAKFDDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG
Ga0207942_10098104	3300020549	Freshwater	KIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0208599_10545152	3300020554	Freshwater	RSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0181353_11222111	3300022179	Freshwater Lake	EKTINKEKNTEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0181354_12137901	3300022190	Freshwater Lake	FRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0181351_11116264	3300022407	Freshwater Lake	KSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0228703_11010551	3300022747	Freshwater	VRRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFIITLRG
Ga0255773_104221912	3300022925	Salt Marsh	KTKTEVVRRTAIFDDKSRVFTTTKGETALVYFDVERNGYRTAKNFIITLKG
Ga0255205_10471002	3300024276	Freshwater	KEKNTEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0255186_10210411	3300024512	Freshwater	DGKKNTKTKVVRRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFIITLKG
Ga0208784_11840971	3300025732	Aqueous	KMEFRSALFDDKSKVWTTTKGETVLTYFDLDRNGYRCAKNFTINLKG
Ga0208916_100953544	3300025896	Aqueous	RSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0255113_10403323	3300027147	Freshwater	INGEKNVEQKREFRSAKFDDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG
Ga0255204_10804151	3300027157	Freshwater	FRSAKFDDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG
Ga0209651_11685501	3300027581	Freshwater Lake	QKMVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0209135_12178101	3300027642	Freshwater Lake	KNKEQKMVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0209769_12752892	3300027679	Freshwater Lake	KNVEQKREFRSAKFDDKSKVWNTTKGETVLTYFDLDRNGYRTAKNFTITLKG
(restricted) Ga0247833_12126951	3300027730	Freshwater	ENTKTEVVRRTAVFDEKSRVFTTTKGETALVYFDLERNGYRTAKNFIITLKG
Ga0209087_13217831	3300027734	Freshwater Lake	IVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0209190_13706261	3300027736	Freshwater Lake	EQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0209355_12372563	3300027744	Freshwater Lake	EQKREFRSAKFDDKSKVWNTTKGETVLTYFDLDRNGYRTAKNFTITLKG
Ga0209230_106421532	3300027836	Freshwater And Sediment	TINKEKNTEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
(restricted) Ga0247839_13243001	3300028553	Freshwater	VFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0315293_102120251	3300031746	Sediment	DKEKNKEQKMVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0315293_104948431	3300031746	Sediment	DKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0315907_102559234	3300031758	Freshwater	NTEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0315907_109483992	3300031758	Freshwater	KNTKTKVVRRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFIITLKG
Ga0315909_105906961	3300031857	Freshwater	KNVEQKREFRSAKFDDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG
Ga0315909_107750482	3300031857	Freshwater	KSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0315904_106032364	3300031951	Freshwater	GEKNTEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0315901_112059342	3300031963	Freshwater	ALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0315906_113555162	3300032050	Freshwater	RSAKFDDKSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG
Ga0315284_109752633	3300032053	Sediment	EKNADTKTIRRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFIITLKQ
Ga0315903_107892633	3300032116	Freshwater	KEQKMVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0315277_113812532	3300032118	Sediment	IDKEKNKEQKMVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0315295_102342694	3300032156	Sediment	KEKNKEQKMVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0334722_109913472	3300033233	Sediment	FRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0334722_112420273	3300033233	Sediment	DKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0334980_0383248_427_534	3300033816	Freshwater	SKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG
Ga0334992_0531211_360_503	3300033992	Freshwater	EVVRRTAIFDEKSRVFTTTKGETALVYFDLERNGYRTAKNFIITLKG
Ga0334979_0687153_416_535	3300033996	Freshwater	FDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0334987_0774236_409_537	3300034061	Freshwater	SALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG
Ga0334995_0366923_803_913	3300034062	Freshwater	KSKVWTTTKGETVLTYFDLDRNGYRTAKNFTITLKG
Ga0335028_0746145_347_505	3300034071	Freshwater	ENNKTEVVRRTAIFDEKSRVFTTTKGETALVYFDLERNGYRTAKNFIITLKG
Ga0335010_0266300_830_1000	3300034092	Freshwater	INKEKNTEQKIVFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0335029_0715628_385_540	3300034102	Freshwater	NNKTEVVRRTAIFDEKSRVFTTTKGETALVYFDLERNGYRTAKNFIITLKG
Ga0335050_0459771_417_554	3300034108	Freshwater	VFRSALFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLRG
Ga0335066_0203513_1004_1171	3300034112	Freshwater	NGQENTKTEVVRRTAIFDEKSRVFTTTKGETALVYFDLERNGYRTAKNFIITLKG
Ga0335053_0729197_3_170	3300034118	Freshwater	NGEKNVKQKREFRSAKFDDKSKVWTTTKGETVLTYFDLERNGYRTAKNFTITLKG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104755

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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