NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104739

Metagenome / Metatranscriptome Family F104739

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104739
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 51 residues
Representative Sequence MNWNAELTVCFVSTSVVNVAFAASYHLPAAASPPTSCAAATISKFLSFSSA
Number of Associated Samples 93
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.06 %
% of genes near scaffold ends (potentially truncated) 31.00 %
% of genes from short scaffolds (< 2000 bps) 88.00 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(14.000 % of family members)
Environment Ontology (ENVO) Unclassified
(45.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 48.10%    β-sheet: 0.00%    Coil/Unstructured: 51.90%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00578AhpC-TSA 15.00
PF00072Response_reg 8.00
PF13692Glyco_trans_1_4 2.00
PF13428TPR_14 2.00
PF01070FMN_dh 2.00
PF02515CoA_transf_3 1.00
PF09360zf-CDGSH 1.00
PF02617ClpS 1.00
PF07719TPR_2 1.00
PF00691OmpA 1.00
PF01408GFO_IDH_MocA 1.00
PF007253HCDH 1.00
PF00515TPR_1 1.00
PF13360PQQ_2 1.00
PF00230MIP 1.00
PF13620CarboxypepD_reg 1.00
PF13570PQQ_3 1.00
PF00534Glycos_transf_1 1.00
PF13191AAA_16 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 2.00
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 2.00
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 1.00
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 1.00
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 1.00
COG2127ATP-dependent Clp protease adapter protein ClpSPosttranslational modification, protein turnover, chaperones [O] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.00 %
UnclassifiedrootN/A1.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459003|FZN2CUW02HGKURAll Organisms → cellular organisms → Bacteria500Open in IMG/M
3300004479|Ga0062595_100949247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300005184|Ga0066671_10664594All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300005328|Ga0070676_10298048All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300005331|Ga0070670_101023620All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300005331|Ga0070670_101673472All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300005334|Ga0068869_100612246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria921Open in IMG/M
3300005338|Ga0068868_100401965All Organisms → cellular organisms → Bacteria → Proteobacteria1182Open in IMG/M
3300005353|Ga0070669_100535991All Organisms → cellular organisms → Bacteria975Open in IMG/M
3300005354|Ga0070675_100642573All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300005471|Ga0070698_100893419All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300005518|Ga0070699_101889689All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300005529|Ga0070741_10116868All Organisms → cellular organisms → Bacteria2769Open in IMG/M
3300005543|Ga0070672_100136537All Organisms → cellular organisms → Bacteria2020Open in IMG/M
3300005764|Ga0066903_100279421All Organisms → cellular organisms → Bacteria2616Open in IMG/M
3300005840|Ga0068870_11252759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300006047|Ga0075024_100109351All Organisms → cellular organisms → Bacteria1221Open in IMG/M
3300006049|Ga0075417_10121244All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300006804|Ga0079221_10320635All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300006844|Ga0075428_100459356All Organisms → cellular organisms → Bacteria1364Open in IMG/M
3300006914|Ga0075436_100132534All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1748Open in IMG/M
3300007004|Ga0079218_12289799All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium631Open in IMG/M
3300007076|Ga0075435_100645703All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300007255|Ga0099791_10440236All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300009088|Ga0099830_10152697All Organisms → cellular organisms → Bacteria1777Open in IMG/M
3300009090|Ga0099827_10130861All Organisms → cellular organisms → Bacteria2033Open in IMG/M
3300009093|Ga0105240_10415070All Organisms → cellular organisms → Bacteria → Proteobacteria1513Open in IMG/M
3300009100|Ga0075418_10876684All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium970Open in IMG/M
3300009101|Ga0105247_11305672All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300009176|Ga0105242_11422822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300009553|Ga0105249_11113268All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300009665|Ga0116135_1299467All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300010046|Ga0126384_10509765All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300010359|Ga0126376_10804949All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300010366|Ga0126379_11505093All Organisms → cellular organisms → Bacteria → Acidobacteria779Open in IMG/M
3300010376|Ga0126381_102991337All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300010391|Ga0136847_11681114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4649Open in IMG/M
3300010398|Ga0126383_10798326All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300010398|Ga0126383_11637730All Organisms → cellular organisms → Bacteria → Acidobacteria733Open in IMG/M
3300010400|Ga0134122_10549740All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300010400|Ga0134122_13095148All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300010401|Ga0134121_10116212All Organisms → cellular organisms → Bacteria2256Open in IMG/M
3300012094|Ga0136638_10518077All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300012189|Ga0137388_10697994All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium942Open in IMG/M
3300012212|Ga0150985_115271478All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300012358|Ga0137368_10197490All Organisms → cellular organisms → Bacteria1434Open in IMG/M
3300012360|Ga0137375_10681322All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300012899|Ga0157299_10359311All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012909|Ga0157290_10356830All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300012922|Ga0137394_10866762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium755Open in IMG/M
3300012929|Ga0137404_12167349All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium519Open in IMG/M
3300012944|Ga0137410_12118756All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300012948|Ga0126375_11865078All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300012960|Ga0164301_11171229All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300012986|Ga0164304_11564582All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300013297|Ga0157378_12081398All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300013306|Ga0163162_12367773All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300013308|Ga0157375_10508389All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300014150|Ga0134081_10293131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium582Open in IMG/M
3300015052|Ga0137411_1357171All Organisms → cellular organisms → Bacteria3403Open in IMG/M
3300015164|Ga0167652_1040277All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300015171|Ga0167648_1052726All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300015264|Ga0137403_10649248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria918Open in IMG/M
3300015371|Ga0132258_12280366All Organisms → cellular organisms → Bacteria → Proteobacteria1358Open in IMG/M
3300015372|Ga0132256_103202952All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300015373|Ga0132257_100005469All Organisms → cellular organisms → Bacteria12181Open in IMG/M
3300018476|Ga0190274_10798268All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300019890|Ga0193728_1096394All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300021073|Ga0210378_10099514All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300021861|Ga0213853_11026524All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300023077|Ga0247802_1065049All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300024347|Ga0179591_1068950All Organisms → cellular organisms → Bacteria2439Open in IMG/M
3300024347|Ga0179591_1182041All Organisms → cellular organisms → Bacteria → Acidobacteria2453Open in IMG/M
3300025907|Ga0207645_11162001All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300025908|Ga0207643_10114312All Organisms → cellular organisms → Bacteria1593Open in IMG/M
3300025922|Ga0207646_11404446All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium607Open in IMG/M
3300025923|Ga0207681_11324544All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300025925|Ga0207650_10826250All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium786Open in IMG/M
3300025927|Ga0207687_10591789All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300025930|Ga0207701_10372238All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300025961|Ga0207712_10121305All Organisms → cellular organisms → Bacteria → Proteobacteria1978Open in IMG/M
3300025986|Ga0207658_10531122All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300026023|Ga0207677_10329417All Organisms → cellular organisms → Bacteria → Proteobacteria1272Open in IMG/M
3300026035|Ga0207703_11320447All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium694Open in IMG/M
3300026095|Ga0207676_11331473All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300027835|Ga0209515_10017907All Organisms → cellular organisms → Bacteria6974Open in IMG/M
3300027875|Ga0209283_10927046All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300027915|Ga0209069_10195345All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1029Open in IMG/M
3300027915|Ga0209069_10604620All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria632Open in IMG/M
3300028799|Ga0307284_10396419All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300028802|Ga0307503_10859663All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300028828|Ga0307312_10661537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria692Open in IMG/M
3300031366|Ga0307506_10194198All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300031538|Ga0310888_10974942All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300031716|Ga0310813_11065056All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium740Open in IMG/M
3300031834|Ga0315290_11256854All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300032163|Ga0315281_10301712All Organisms → cellular organisms → Bacteria1749Open in IMG/M
3300032163|Ga0315281_11261656All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300032275|Ga0315270_10404224All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium871Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment4.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.00%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.00%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds1.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment1.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.00%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater1.00%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.00%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.00%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459003Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012094Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015164Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015171Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027835Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_088131902170459003Grass SoilMNWNAELTVCFVSTSVVNVAFAASYHLPAAASPPTSCAAATISKFLSFSSA
Ga0062595_10094924713300004479SoilELIVCFVSTSAVNVAPAASYHWPAAASPPVSCAAATISKFWSFSSP*
Ga0066671_1066459413300005184SoilQTPIGTLMNWKFELTVCWRSISVVNVAFAASYHLPAAASPPVSCAAATISKLLPFSS*
Ga0070676_1029804833300005328Miscanthus RhizosphereLINWNAELTVCEVSTSVVKVAFAASYHLPAAASPPVSCAAAMISKFRSFSSA*
Ga0070670_10102362023300005331Switchgrass RhizosphereSSIQMPIGTLINWNAELMACVVSTSVVKVAFAASYHLPAAASPPVSCAAEMISKFRSFSSA*
Ga0070670_10167347213300005331Switchgrass RhizosphereQTPDGTFTNWNAELTLWRVSSSCVNVACAASYHLPASASPPMSWAAATISKFFPLSSS*
Ga0068869_10061224623300005334Miscanthus RhizosphereMNWKTELTVCLVSTSCVNVAFAASYHLPAAASPPTSCAAAMSSKFSSFSSA*
Ga0068868_10040196533300005338Miscanthus RhizosphereIQIPIGTLMNWYAELTPCFASISVVYVAFAASYHLPAAASPPTSCAAAMSSKFSSFSSA*
Ga0070669_10053599123300005353Switchgrass RhizosphereLINWNAELTVWVASTSVVNVAFAASYHLPAAGSPPVSCATAMISKFLSFSSA*
Ga0070675_10064257323300005354Miscanthus RhizosphereLINWNAELMACVVSTSVVKVAFAASYHLPAAASPPVSCAAAMISKFRSFSSA*
Ga0070698_10089341923300005471Corn, Switchgrass And Miscanthus RhizosphereLANWNAELTAWFASTSVVNVALAASYHGPAAASPPVSCAAATISRFACFSSL*
Ga0070699_10188968923300005518Corn, Switchgrass And Miscanthus RhizosphereAELTACVVSTSVVNVAFAASYHLPAAASPPTSCAAATIPKFLSLSSS*
Ga0070741_1011686823300005529Surface SoilMNWNAELTAWRTSMSVVNVAFAASYHLPAACSPAVSWAAATISKPRGFSSS*
Ga0070672_10013653723300005543Miscanthus RhizosphereMPIGTLIKWNAELTACVVSISVVKAAFAASYHLPAAASPPVSCAAAMISKFRSFSSA*
Ga0066903_10027942133300005764Tropical Forest SoilMNWNAELIAWFASTSVVNVALAASYHRPAAASPPVSCATATISKFASFSSL*
Ga0068870_1125275923300005840Miscanthus RhizosphereMPIGTLINWNAELMACVVSTSVVKVAFAASYHLPAAASPPVSCAAEMISKFRSFSSA*
Ga0075024_10010935123300006047WatershedsMNWNTELTVCLVSTSVVNVAFAASYHFPAAASPPTSCAAATISKLRSFSSA*
Ga0075417_1012124423300006049Populus RhizosphereLTNWNAELTAWVASTSVVNVALAASYHFPAAASPPVSCAAATISKFLSFSSL*
Ga0079221_1032063523300006804Agricultural SoilMNWYAVLTACWASISVVYVAFAASYHLPAAASPPVSCAAAMISKF*
Ga0075428_10045935613300006844Populus RhizosphereLLNWNAELTVWLASTSVVNVALAASYHFPAAASPPVSCAAATISKFASFSSV*
Ga0075436_10013253413300006914Populus RhizosphereNAELTAWLASTSVVKVALAASYQRPAAASPPVSCAAATISKFLSFSSV*
Ga0079218_1228979923300007004Agricultural SoilSTQTPVGTLVNWNAELTACAGSISVVYVALAASYHLPAAASPPVSCAAAMISKFLPFSSS
Ga0075435_10064570313300007076Populus RhizosphereMNWYAVLTACWVSISVEYVAFAASYHLPAAASPPVSCAAAMISKF*
Ga0099791_1044023623300007255Vadose Zone SoilMNCKTELTVCFASTSVVNVAFAASYHLPAAASPPVSCAAATISKLLSFSSA*
Ga0099830_1015269723300009088Vadose Zone SoilLTNWNAELTVCFASTSAVKVAFAASYHLPAAASPPVSCAAAMISKFLSFSSV*
Ga0099827_1013086133300009090Vadose Zone SoilMNWNAELTVCFASTSAVKVAFAASYHLPAAASPPVSCAAAMISKFLSFSSV*
Ga0105240_1041507023300009093Corn RhizosphereMNWNTELTVCLVSTSVVNVAFAASYHLPAAASPPTSCAAAISSKFLSFSSA*
Ga0075418_1087668423300009100Populus RhizosphereLLNWNAELTAWLASTSVVNVALAASYHFPAAASPPVSCAAATISKFASFSSL*
Ga0105247_1130567213300009101Switchgrass RhizosphereTVCRVSISCVNVASAASYQRPAAASPPTSCAAAMISMFLSFSSL*
Ga0105242_1142282223300009176Miscanthus RhizosphereELIVCFVSTSAVNVAPAASYHWPAAASPPVSCAAAIISKFRSFSSA*
Ga0105249_1111326823300009553Switchgrass RhizosphereMPIGTLINWNAELTVWVASTSVVNVAFAASYHLPAAGSPPVSCATEMISKFLSFSSA*
Ga0116135_129946723300009665PeatlandMPIGTLMNWYAVLTLCWASISVVKVAFAASYHFPAAASPPVSCAAAIISKFWSCSSV*
Ga0126384_1050976513300010046Tropical Forest SoilTLMNWYAELTACCVSIKVVKVAFAASYHLPAAASPPVSCAAATISKF*
Ga0126376_1080494933300010359Tropical Forest SoilMPIGTLMNWYAELTACCVSIKVVKVAFAASYHLPAAASPPVSCAAATISKF*
Ga0126379_1150509323300010366Tropical Forest SoilMNWKAELTACCVSISVVNVALAASYHLPAAASPPVSWAAATISKFWSCSSV*
Ga0126381_10299133723300010376Tropical Forest SoilWKAELTACCVSISVVNVALAASYDLPAAASPPVSWAAATISKFWSCSSV*
Ga0136847_1168111433300010391Freshwater SedimentLTNWNTELTVCFVSTSVVNVAFAASYHLPAAASPPVSSAAATISKFLSFSSS*
Ga0126383_1079832623300010398Tropical Forest SoilMGTLMNWYAELTACCVSIKVVKVALAASYHLPAAASPPVSCAAATISKF*
Ga0126383_1163773023300010398Tropical Forest SoilMPIGTLMNWKAELTACCVSISVVNVALAASYHLPAAASPPVSWAAATISKFWSCSSV*
Ga0134122_1014448543300010400Terrestrial SoilVCLVSISVVNVAFAASYHLPAAASPPTSCAASMISKFVLLSSA*
Ga0134122_1054974023300010400Terrestrial SoilMNWKSELTVCFTSTSVVNVALAASYHLPAAASPPVSCAAAMISKFRPFSSA*
Ga0134122_1309514823300010400Terrestrial SoilLTNWNVELTACCRSISVVKVALAASYHLPAAASPPVSCAAATISKLRAFSSW*
Ga0134121_1011621243300010401Terrestrial SoilLTNWNTELTVCVASTRVVNVALAASYHLPAAASPPVSCAAATISKFLSFSSL*
Ga0136638_1051807723300012094Polar Desert SandVNWNAELTACFASTNVVYVARATSYHFPAAVSPAVSWAAAMISKLLLFSSS*
Ga0137388_1069799423300012189Vadose Zone SoilLTNWNAELTVCFASTSAVKVAFAASYHLPAAASPPVSCAAAMISKFPSFSSV*
Ga0150985_11527147823300012212Avena Fatua RhizosphereMNWYSELMVCFVSTSCVNVAFAASYHLPAAASPPVSCAAAMSSKF*
Ga0137368_1019749033300012358Vadose Zone SoilMNWNAELIACFASTSVVNVAFAVSYHLPAAASPPVSWAAATIAKFRSLSSS*
Ga0137375_1068132223300012360Vadose Zone SoilMNWNAELIACFASTSVVNVAFAVSYHLPAAASPPVSSAAATISKFRSLSSS*
Ga0157299_1035931123300012899SoilLIKWNAELTACVVSISVVKAAFAASYHLPAAASPPVSCAAAMISKFRSFSSA*
Ga0157290_1035683023300012909SoilELTACVVSTSVVYVAFAASYHLPAAASPPVSCAAAMISKFLPFSSS*
Ga0137394_1086676213300012922Vadose Zone SoilLRSWNAELTLCVASTSVVNVAFAASYHLPAAASPPVSCAAATISKLLSFSSA*
Ga0137404_1216734923300012929Vadose Zone SoilMNWKTELTVCLVSTSCVKVAFAASYHLPAAASPPTSCAAAMISKFLSFSSA*
Ga0137410_1211875623300012944Vadose Zone SoilLCVASTSVVNVAFAASYHLPAAASPPVSCAAATISKLLSFSSA*
Ga0126375_1186507813300012948Tropical Forest SoilNAELTAWLVSTSVVYVAFAASYHLPAAASPPVSCAAATISKFLSLSSL*
Ga0164301_1117122923300012960SoilVCLASTSVVNAAFAASYHLPAAASPPVSCAAAMISKFLSFSSA*
Ga0164304_1156458223300012986SoilWNVELTACCRSISVVKVALAASYHLPAAASPPVSCAAATISKLRAFSC*
Ga0157378_1208139823300013297Miscanthus RhizosphereMPIGTLINWNTELTVCVVSTSVVKVAFAASYHLPAAASPPVSCAAAMISKFRSFSSA*
Ga0163162_1236777323300013306Switchgrass RhizosphereMPIGTLINWNAELTVWVASTSVVNVAFAASYHLPAAASPPTSCAAATISKFLSFSSA*
Ga0157375_1050838933300013308Miscanthus RhizosphereMPIGTLINWNAELTVWVASTSVVKVAFAASYHLPAAASPPVSCAAAMISKSLSFSSA*
Ga0134081_1029313123300014150Grasslands SoilNTELTVCFASTSVVKVAFAASYHWPAAASPPVSCAAAISSKFLSFSSA*
Ga0137411_135717143300015052Vadose Zone SoilMPAGTLINWNAELTVCLVSTSVVNVAFAASYHLPAAAHRATSWAAATISKFLSLSSS*
Ga0167652_104027723300015164Glacier Forefield SoilMNWNTELTVCFVSTSVVNVAFAASYHLPAAASPPVSWAAAMISKFRSFSSA*
Ga0167648_105272623300015171Glacier Forefield SoilMNWNTELTVCFVSTSVVNVALAASYHLPAAASPPTSCAAATISKFLSFSSS*
Ga0137403_1064924823300015264Vadose Zone SoilMNWKTELTVCLVSTSCVNVAFAASYHLPAAASPPTSCAAAMISKFLSFSSA*
Ga0132258_1228036613300015371Arabidopsis RhizosphereELTVCRVSISCVNVALAASYQRPAAASPPTSCAAAMISMFLSFSSL*
Ga0132256_10320295213300015372Arabidopsis RhizosphereNAELTAWFASTSVVYVAFAASYHLPAAASPPVSCAAATISKFLSFSSV*
Ga0132257_100005469113300015373Arabidopsis RhizosphereWNAELTACFASTSVVKVAFAASYHLPAAASPPVSCATATISKFLPFSSS*
Ga0190274_1079826823300018476SoilMNWKTELTVCLVSTSCVNVAFAASYHLPAAASPPTSCAAAMISKFLSFSSV
Ga0193728_109639423300019890SoilMNWKTELTVCFVSTSCVNVAFAASYHLPAAASPPTSCAAAMISKFWSFSSA
Ga0210378_1009951423300021073Groundwater SedimentMNWKTELTVCFVSTSVVNVALAASYHLPAAASPPVSCAAAMISKFWSFSSA
Ga0213853_1102652423300021861WatershedsMNWKTELTVCLVSTSWVNAAFAASYHLPAAASPPTSWAAAMISKFLFFSSA
Ga0247802_106504923300023077SoilMPIGTLIKWNAELTACVVSISVVKAAFAASYHLPAAASPPVSCAAAMISKFRSFSSA
Ga0179591_106895033300024347Vadose Zone SoilMNWKTELTVCLVSTSCVNVAFAASYHLPAAASPPTSCAAAMISKFLSFSSA
Ga0179591_118204123300024347Vadose Zone SoilMNWNSELTVCFVSTSCVNVAFAASYHLPAAASPPTSCAAAMISKLRSFSSA
Ga0207645_1116200123300025907Miscanthus RhizosphereLINWNAELTVCEVSTSVVKVAFAASYHLPAAASPPVSCAAAMISKFRSFSSA
Ga0207643_1011431213300025908Miscanthus RhizosphereNAELTACVVSTSVVKVAFAASYHFPAAASPPVSCAAATISKFRSFSSA
Ga0207646_1140444613300025922Corn, Switchgrass And Miscanthus RhizosphereTVCFGSTSVVNVAFAASYHFPAAASPPESCAAATISKFLSFSSS
Ga0207681_1132454423300025923Switchgrass RhizosphereELTVWVASTSVVNVAFAASYHLPAAGSPPVSCATAMISKFLSFSSA
Ga0207650_1082625013300025925Switchgrass RhizosphereINWNAELMACVVSTSVVKVAFAASYHLPAAASPPVSCAAATISKFRSFSSA
Ga0207687_1059178923300025927Miscanthus RhizosphereMNWKTELTVCLVSTSCVNVAFAASYHLPAAASPPTSCAAAMSSKFLSFSSA
Ga0207701_1037223823300025930Corn, Switchgrass And Miscanthus RhizosphereMPVGTFTNWNRELTVWFASTSVVKVALAASYHLPAAASPPVSCAAAMISKFRDLSSV
Ga0207712_1012130543300025961Switchgrass RhizosphereLINWNAELTVWVASTSVVNVAFAASYHLPAAGSPPVSCATEMISKFLSFSSA
Ga0207658_1053112223300025986Switchgrass RhizosphereLINWNAELTACVVSTSVVKVAFAASYHLPAAASPPVSCAAATISKFRSFSSA
Ga0207677_1032941713300026023Miscanthus RhizosphereTPIGTLMNWKTELTVCLVSTNCVNVAFAASYHLPAAASPPTSCAAAMSSKFSSFSSA
Ga0207703_1132044723300026035Switchgrass RhizosphereMNWKTELTVCLVSTSCVNVAFAASYHLPAAASPPTSCAAAMSSKFSSFSSA
Ga0207676_1133147323300026095Switchgrass RhizosphereLINWNAELTLCKVSTSVVKVAFAASYHLPAAASPPVSCAAAMISKFRSFSSA
Ga0209515_1001790723300027835GroundwaterMHWNTELTECVVSTSVVNVAFAASYHVPAAASPPTSCAAATISKFLSFSSA
Ga0209283_1092704623300027875Vadose Zone SoilLTNWNAELTVCFASTSAVKVAFAASYHLPAAASPPVSCAAAMISKFLSFSSV
Ga0209069_1019534523300027915WatershedsMNWNTELTVCLVSTSVVNVAFAASYHFPAAASPPTSCAAATISKLRSFSSA
Ga0209069_1060462023300027915WatershedsMNWKSELISCFASTSVVNVAFAASYHLPAAASPPVSCAAETISKFLSFSSP
Ga0307284_1039641923300028799SoilTPIGTLANWNTELTVCFVSTSVVNVAPAASYHLPAAASPPMSCAAATISKWWPLSSA
Ga0307503_1085966323300028802SoilIQMPVGTLISWNAELTACVVSTSVVKVAFAASYHLPAAASPPVSCAAAMISKFRSFSSA
Ga0307312_1066153723300028828SoilLINWNAELTACVVSTSVVKVALAASYHLPAAASPPVSCAAAMISKFRSFSSA
Ga0307506_1019419823300031366SoilMNWNSELTVCFVSTSCVNVAFAASYHLPAAASPPTSCAAAMISKFWPFSSA
Ga0310888_1097494223300031538SoilLTVWFVSTSVVKVALAASYHLPAAASPPVSCAAAMISKFRDFSSV
Ga0310813_1106505613300031716SoilPASSIQMPVGTLINWNAELTACVVSTSVVKVAFAASYHLPAAASPPVSCAAATISRFRSFSSA
Ga0315290_1125685413300031834SedimentELTVCFTSTSVVKVACAASYHFPAAASPPVSCAAATISKFVPLSAA
Ga0315281_1030171223300032163SedimentMNWNTELTVCFVSMSAVNVAFAASYHAPAAASPPVSCAAAMISKFLSFSCA
Ga0315281_1126165623300032163SedimentMNWNTELTVWLVSTSVVNVAFAASYHLPAAASPPTSCAAATISKCLSFSSA
Ga0315270_1040422423300032275SedimentLLNWNTELTVCLVSTSVVYVAFAASYHLPAAGSPSVSCAAVTISRFLSFSSA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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