Basic Information | |
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Family ID | F104714 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 100 |
Average Sequence Length | 55 residues |
Representative Sequence | MDIWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE |
Number of Associated Samples | 57 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 77.00 % |
% of genes near scaffold ends (potentially truncated) | 29.00 % |
% of genes from short scaffolds (< 2000 bps) | 80.00 % |
Associated GOLD sequencing projects | 54 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Duplodnaviria (77.000 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (23.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (58.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (47.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 18.18% β-sheet: 18.18% Coil/Unstructured: 63.64% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Freshwater Sediment Freshwater Freshwater Freshwater Lake Freshwater Lentic Freshwater Freshwater, Plankton Freshwater Lake Freshwater Lake Freshwater, Surface Ice Freshwater Aqueous |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
B570J29032_1096280511 | 3300002408 | Freshwater | FASGGEMDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE* |
B570J29032_1098161994 | 3300002408 | Freshwater | MNIWHKIKKLAAKGSPRINAEAHPSLVERAIVVRWGNTATIKRTPLRERENGESE* |
B570J40625_10004017810 | 3300002835 | Freshwater | MDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE* |
Ga0068876_102190033 | 3300005527 | Freshwater Lake | MSIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRAPAREREKGKSE* |
Ga0068876_104534121 | 3300005527 | Freshwater Lake | MKIWHKIKKLAGKASPRINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE* |
Ga0068876_105964241 | 3300005527 | Freshwater Lake | RLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLRERESGEIE* |
Ga0068872_102311052 | 3300005528 | Freshwater Lake | MDIWKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLREREKGEDE* |
Ga0049081_100039195 | 3300005581 | Freshwater Lentic | MDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLRERERGIDE* |
Ga0049081_100367643 | 3300005581 | Freshwater Lentic | MSIWHKIKKLAGKGSHRINVEAPTSHVERAIVVRWGNTATTKRTPVQWREKGESE* |
Ga0049081_101746023 | 3300005581 | Freshwater Lentic | MNIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRTPLRERENGESE* |
Ga0049080_102493301 | 3300005582 | Freshwater Lentic | MNIWHKIKKLAAKGSPRINVEAPTSHVERAIVVRWGNTATVKRTPLRERERGIDE* |
Ga0049080_102656062 | 3300005582 | Freshwater Lentic | MDIWKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPL |
Ga0079957_13763753 | 3300005805 | Lake | MNIWHKIKKLAAKGAPRINVEAHPSLVERAIVVRWGNTATIKRTPLRERENGESE* |
Ga0075464_102640713 | 3300006805 | Aqueous | DIWHKIKKLAGKGAPRINAEASRSHVERAIVVRWGNTATIKRTPVKWREKGESE* |
Ga0075464_104587521 | 3300006805 | Aqueous | MSIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRTPLRERENGENE* |
Ga0075464_105949883 | 3300006805 | Aqueous | MNIWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEDE* |
Ga0075464_108639391 | 3300006805 | Aqueous | GSRASARLPVALAGGKMDIWHKIKKLAGKGAPRINAEASRSHVERAIVVRWGNTATIKRTPVKWREKGESE* |
Ga0075464_110006951 | 3300006805 | Aqueous | MDIWHKIKKLAAKGAPRINAEAPSSLVERAIVVRWGNTATIKRTPVQWREKGKSE* |
Ga0075464_110536992 | 3300006805 | Aqueous | VGGFMNIFKKLKKLAGKAQPKINADASRSHVERAIVVRWGDTATIKRAPAREREKGKSE* |
Ga0114340_11652783 | 3300008107 | Freshwater, Plankton | LKKLGRKGAAKINAEAPSSHLERAIVVRWGNTATVKRTPLRERESGEIE* |
Ga0114340_12144662 | 3300008107 | Freshwater, Plankton | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATVKRTPLRERERGIDE* |
Ga0114343_11553633 | 3300008110 | Freshwater, Plankton | MDIWKKLKKLGRKGAAKINAEAPSSHLERAIVVRWGNTATVKRTPLRERESGEIE* |
Ga0114347_10105099 | 3300008114 | Freshwater, Plankton | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEDE* |
Ga0114351_13142483 | 3300008117 | Freshwater, Plankton | MDIWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE* |
Ga0114841_12711882 | 3300008259 | Freshwater, Plankton | MDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEEE* |
Ga0114336_11036592 | 3300008261 | Freshwater, Plankton | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATIKRTPVKWREKGEDE* |
Ga0114363_10605452 | 3300008266 | Freshwater, Plankton | MDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATIKRTPLRERENGESE* |
Ga0114363_10682192 | 3300008266 | Freshwater, Plankton | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEEE* |
Ga0114363_10839821 | 3300008266 | Freshwater, Plankton | MNIWHKIKKLAAKGSPRINVEAHPSPVERAIVVRWGNTATIKRTPLREREKGKSE* |
Ga0114363_11421521 | 3300008266 | Freshwater, Plankton | MNIWHKIKKLAAKGSPRINVEASRSHVERAVVVRWGNTATIKRTPLRERENGESE* |
Ga0114363_11615632 | 3300008266 | Freshwater, Plankton | MSIWHKIKKLAGKGAPRINAEAPQSHVERAIVVRWGNTATVKRMPVQWREKGENE* |
Ga0114363_12048332 | 3300008266 | Freshwater, Plankton | MNIWHKIKKLTAKGAPRINAEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEDE* |
Ga0114363_12307822 | 3300008266 | Freshwater, Plankton | VGLRLGSLFASGGEMDIWKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLREREKGEDE* |
Ga0114363_12351752 | 3300008266 | Freshwater, Plankton | VGLRLGSLFASGGEMDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE* |
Ga0114876_10686441 | 3300008448 | Freshwater Lake | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATVKRTPLRERESGEIE* |
Ga0114876_11870593 | 3300008448 | Freshwater Lake | WHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEEE* |
Ga0114880_12109363 | 3300008450 | Freshwater Lake | WHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEDG* |
Ga0114880_12296511 | 3300008450 | Freshwater Lake | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATTKRTPVQWREKGKSE* |
Ga0105090_108643222 | 3300009075 | Freshwater Sediment | MNIWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATTKRTPVQWREKGESE* |
Ga0105103_102432162 | 3300009085 | Freshwater Sediment | MNIWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE* |
Ga0153801_10668593 | 3300012017 | Freshwater | GEMDIWKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLREREKGEDE* |
Ga0157498_10012645 | 3300012666 | Freshwater, Surface Ice | MDIWKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLRERESGEIE* |
Ga0157625_11297362 | 3300012729 | Freshwater | MSIWHKIKKLAAKRSPRINVEAHPSLVERAIVVRWGNTATIKRTPVQWRE |
Ga0157606_12370142 | 3300012733 | Freshwater | MNIWHKIKKLAAKGSPRINAEAHPSLVERAIVVRWGNTATIKRTPVQWREKGKSE* |
Ga0164292_105708503 | 3300013005 | Freshwater | MSIWHKIKKLAAKGSPRINAEAHPSLVERAIVVRWGNTATIKRTPLRERENGESE* |
(restricted) Ga0172373_1000616315 | 3300013131 | Freshwater | MNIWHRIKKLAGKGEPRINAEASPSLVERAIVVRWGNTATIKRTPVQWREKGKSE* |
Ga0177922_106507342 | 3300013372 | Freshwater | MDIWKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLRERE |
Ga0177922_107408282 | 3300013372 | Freshwater | MSIWHRIKKLAGKGAPRINVEAPSSHVERAIVVRWGNTATIKRTPVKWREKGESE* |
Ga0208232_10212763 | 3300020527 | Freshwater | LRLGTPFASGGEMDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE |
Ga0208364_10010023 | 3300020533 | Freshwater | MDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE |
Ga0207939_10010182 | 3300020536 | Freshwater | MNIWHKIKKLAAKGSPRINAEAHPSLVERAIVVRWGNTATIKRTPLRERENGESE |
Ga0208855_10013322 | 3300020553 | Freshwater | MDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLRERERGIDE |
Ga0208916_101610043 | 3300025896 | Aqueous | MNIWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEDE |
Ga0208916_104680312 | 3300025896 | Aqueous | MSIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRTPLRERENGENE |
Ga0208975_10179795 | 3300027659 | Freshwater Lentic | WKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLREREKGEDE |
Ga0208975_10419363 | 3300027659 | Freshwater Lentic | MSIWHKIKKLAGKGSHRINVEAPTSHVERAIVVRWGNTATTKRTPVQWREKGESE |
Ga0209392_11073822 | 3300027683 | Freshwater Sediment | MNIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRTPLRERENGESE |
Ga0209134_101175962 | 3300027764 | Freshwater Lake | MDIWHKIKKLAGKGAPRINAEAPSSLVERAIVVRWGNTATVKRTPVQWREKGKSE |
Ga0209079_102719343 | 3300027972 | Freshwater Sediment | GRMNIWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE |
Ga0315907_101255652 | 3300031758 | Freshwater | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEEE |
Ga0315907_101357092 | 3300031758 | Freshwater | MEIWHKIKKLAGKASPRINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE |
Ga0315907_102758391 | 3300031758 | Freshwater | EGRMSIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRAPAREREKGKSE |
Ga0315907_105383421 | 3300031758 | Freshwater | MDIWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEDE |
Ga0315899_101776325 | 3300031784 | Freshwater | MSIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRAPAREREKGKSE |
Ga0315899_110547292 | 3300031784 | Freshwater | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATVKRTPLRERESGEIE |
Ga0315900_101481932 | 3300031787 | Freshwater | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATIKRTPVKWREKGEDE |
Ga0315900_108316093 | 3300031787 | Freshwater | EMDIWKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLRERESGEIE |
Ga0315909_100344492 | 3300031857 | Freshwater | MDIWKRLKKLGRKGAAKINVEAHPSLVERAIVVRWGNTATIKRTPLRERENGESE |
Ga0315909_100497862 | 3300031857 | Freshwater | MNVWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEDE |
Ga0315909_101893473 | 3300031857 | Freshwater | MNIWHKIKKLAAKGAPRINGEAPQSHVERAIVVRWGNTATTKRTPVQWREKGESE |
Ga0315909_101904612 | 3300031857 | Freshwater | MDIWKRLKKLRRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLRERERGIDE |
Ga0315909_102535573 | 3300031857 | Freshwater | MDIWKRLKKLGRKGAAKINAEAPRSHVERAIVVRWGNTATVKRTPLREREKGEDE |
Ga0315909_103762062 | 3300031857 | Freshwater | MSIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRAPARERENGKSE |
Ga0315909_105281013 | 3300031857 | Freshwater | MNIWHKIKKLAAKGSPRINVEASRSHVERAVVVRWGNTATIKRTPLRERENGESE |
Ga0315904_102485334 | 3300031951 | Freshwater | MNIWHKIKKLTAKGAPRINAEAPTSHVERAIVVRWGNTATTKRTPVKWREKGEDE |
Ga0315904_106764293 | 3300031951 | Freshwater | VEQQGVGLRLGSLFASGGEMDIWKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLRERESGEIE |
Ga0315904_112861001 | 3300031951 | Freshwater | MNIWHKIKKLAAKGSPRINVEAHPSPVERAIVVRWGNTATIKRTPLREREKGKSE |
Ga0315901_101817585 | 3300031963 | Freshwater | EQQGVGLRLGSLFASGGEMDIWKRLKKLGRKGAAKINAEAPSSHVERAIVVRWGNTATVKRTPLRERESGEIE |
Ga0315906_103597693 | 3300032050 | Freshwater | MNIWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNTATVKRTPVKWREKGEEE |
Ga0315903_102321835 | 3300032116 | Freshwater | KLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRAPAREREKGENE |
Ga0315903_102345484 | 3300032116 | Freshwater | MNIWHKIKKLAAKGAPRINGEAPTSHVERAIVVRWGNRATTKRTPVKWREKGEDE |
Ga0334982_0119707_955_1122 | 3300033981 | Freshwater | MSIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRTPLRERENGESE |
Ga0334994_0481864_268_435 | 3300033993 | Freshwater | MDIWKRLKKLGRKGADKINAEAPTSHVERAIVVRWGNTATTKRTPVQWREKGKSE |
Ga0334996_0219518_869_1000 | 3300033994 | Freshwater | MDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRT |
Ga0335002_0058308_488_655 | 3300034020 | Freshwater | MDIWKKLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGEDE |
Ga0334987_0296605_546_713 | 3300034061 | Freshwater | MSIWHKIKKLAAKRSPRINVEAHPSLVERAIVVRWGNTATIKRAPAREREKGKSE |
Ga0334995_0066365_1474_1641 | 3300034062 | Freshwater | MDIWKRLKKLGRKGADKINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGKSE |
Ga0335019_0265499_2_157 | 3300034066 | Freshwater | MNIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRTPVQWREKG |
Ga0335019_0568021_415_582 | 3300034066 | Freshwater | MDIWHKIKKLAGKGAPRINAEAHPSLVERAIVVRWGNTATIKRTPVQWREKGKSE |
Ga0335027_0012985_6795_6962 | 3300034101 | Freshwater | MSIWHKIKKLAAKGSPRINAEAHPSLVERAIVVRWGNTATIKRTPVQWREKGKSE |
Ga0335027_0067656_62_229 | 3300034101 | Freshwater | MDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLRERERRIDE |
Ga0335027_0560304_2_163 | 3300034101 | Freshwater | IWHKIKKLAAKGAPRINAEAPTSHVERAIVVRWGNIATVKRTPLRERESGEIE |
Ga0335036_0025649_480_647 | 3300034106 | Freshwater | MNIWKRLKKLGRKGAAKINVEAHPSLVERAIVVRWGNTATIKRTPLRERENGESE |
Ga0335036_0177932_3_152 | 3300034106 | Freshwater | LKKLGRKGADKINAEAPTSHVERAIVVRWGNTATVKRTPLREREKGKSE |
Ga0335036_0480034_611_778 | 3300034106 | Freshwater | MDIWHKIKKLAGKGAPRINAEPSRSHVERAIVVRWGNTATIKRTPLKWREKGESE |
Ga0335063_0320928_2_148 | 3300034111 | Freshwater | MDIWKRLKKLGRKGAAKINAEAPTSHVERAIVVRWGNTATVKRTPLRER |
Ga0335053_0432985_333_500 | 3300034118 | Freshwater | MDIWHKIKKLAGKGAPRINAEAHPSLVERAIVVRWGNTATVKRTPVQWREKGKSE |
Ga0335049_0327017_120_287 | 3300034272 | Freshwater | MDIWHKIKKLAAKGAPRINAEAPSSLVERAIVVRWGNTATVKRMPVKWREKGENE |
Ga0335007_0161206_29_196 | 3300034283 | Freshwater | MNIWHKIKKLAAKGSPRINVEAHPSLVERAIVVRWGNTATIKRTPLREREKGISE |
Ga0335039_0410059_486_653 | 3300034355 | Freshwater | MDIWHKIKKLAGKGAPRISAEASRSHVERAIVVRWGNTATIKRTPLRERENGENE |
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