NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104712

Metagenome Family F104712

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104712
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 60 residues
Representative Sequence MPSLVVEAECLAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPRPEG
Number of Associated Samples 61
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 18.18 %
% of genes near scaffold ends (potentially truncated) 31.00 %
% of genes from short scaffolds (< 2000 bps) 69.00 %
Associated GOLD sequencing projects 48
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (51.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(29.000 % of family members)
Environment Ontology (ENVO) Unclassified
(49.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(73.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 6.74%    β-sheet: 13.48%    Coil/Unstructured: 79.78%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF11752DUF3309 11.00
PF13392HNH_3 2.00
PF12236Head-tail_con 2.00
PF13313DUF4082 2.00
PF04011LemA 1.00
PF07484Collar 1.00
PF00959Phage_lysozyme 1.00
PF03837RecT 1.00
PF01757Acyl_transf_3 1.00
PF04448DUF551 1.00
PF00171Aldedh 1.00
PF01471PG_binding_1 1.00
PF00589Phage_integrase 1.00
PF05838Glyco_hydro_108 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 1.00
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 1.00
COG1704Magnetosome formation protein MamQ, lipoprotein antigen LemA familyCell wall/membrane/envelope biogenesis [M] 1.00
COG3723Recombinational DNA repair protein RecTReplication, recombination and repair [L] 1.00
COG3926Lysozyme family proteinGeneral function prediction only [R] 1.00
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.00 %
UnclassifiedrootN/A48.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886013|SwBSRL2_contig_3614970All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1890Open in IMG/M
3300005289|Ga0065704_10665841All Organisms → cellular organisms → Bacteria → Terrabacteria group576Open in IMG/M
3300005294|Ga0065705_10155938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens1834Open in IMG/M
3300005295|Ga0065707_11072525Not Available522Open in IMG/M
3300005338|Ga0068868_100439575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1132Open in IMG/M
3300005341|Ga0070691_10000022All Organisms → Viruses45190Open in IMG/M
3300005341|Ga0070691_10140426Not Available1230Open in IMG/M
3300005347|Ga0070668_100583955Not Available976Open in IMG/M
3300005365|Ga0070688_100000583All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales18369Open in IMG/M
3300005406|Ga0070703_10025630Not Available1750Open in IMG/M
3300005406|Ga0070703_10181228Not Available814Open in IMG/M
3300005444|Ga0070694_100124977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1851Open in IMG/M
3300005455|Ga0070663_100458088Not Available1052Open in IMG/M
3300005467|Ga0070706_100338452Not Available1403Open in IMG/M
3300005467|Ga0070706_102070733All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium515Open in IMG/M
3300005468|Ga0070707_100018441All Organisms → cellular organisms → Bacteria6565Open in IMG/M
3300005468|Ga0070707_100052462All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium3910Open in IMG/M
3300005468|Ga0070707_100985974All Organisms → cellular organisms → Bacteria → Terrabacteria group808Open in IMG/M
3300005471|Ga0070698_100705410Not Available951Open in IMG/M
3300005471|Ga0070698_101093712Not Available746Open in IMG/M
3300005471|Ga0070698_101412190Not Available647Open in IMG/M
3300005518|Ga0070699_101585692Not Available600Open in IMG/M
3300005547|Ga0070693_100362209All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae995Open in IMG/M
3300005549|Ga0070704_101359008Not Available651Open in IMG/M
3300005617|Ga0068859_100001138All Organisms → cellular organisms → Bacteria → Proteobacteria27079Open in IMG/M
3300005617|Ga0068859_100266633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1804Open in IMG/M
3300005617|Ga0068859_100900309Not Available969Open in IMG/M
3300005617|Ga0068859_101195111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae837Open in IMG/M
3300005617|Ga0068859_101392189Not Available773Open in IMG/M
3300005617|Ga0068859_102525969Not Available565Open in IMG/M
3300005618|Ga0068864_100000281All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae45541Open in IMG/M
3300005718|Ga0068866_10901598Not Available622Open in IMG/M
3300005719|Ga0068861_100046114All Organisms → cellular organisms → Bacteria3285Open in IMG/M
3300005719|Ga0068861_100329958Not Available1331Open in IMG/M
3300005842|Ga0068858_100503380Not Available1170Open in IMG/M
3300005843|Ga0068860_100271922All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1654Open in IMG/M
3300005844|Ga0068862_100023792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5135Open in IMG/M
3300005844|Ga0068862_100038590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. YR6814051Open in IMG/M
3300005844|Ga0068862_100047546Not Available3662Open in IMG/M
3300005844|Ga0068862_100146012Not Available2102Open in IMG/M
3300005844|Ga0068862_100242751All Organisms → cellular organisms → Bacteria → Proteobacteria1638Open in IMG/M
3300005844|Ga0068862_100472368All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens1186Open in IMG/M
3300005844|Ga0068862_101170238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae766Open in IMG/M
3300005844|Ga0068862_102664787Not Available512Open in IMG/M
3300006805|Ga0075464_10281408Not Available999Open in IMG/M
3300006805|Ga0075464_11090757Not Available503Open in IMG/M
3300009011|Ga0105251_10223461Not Available848Open in IMG/M
3300009092|Ga0105250_10204418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium → unclassified Cryobacterium → Cryobacterium sp. MDB2-A-2834Open in IMG/M
3300009101|Ga0105247_11615956Not Available533Open in IMG/M
3300009177|Ga0105248_12527926All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300009553|Ga0105249_10811698Not Available1000Open in IMG/M
3300010397|Ga0134124_10864393Not Available908Open in IMG/M
3300010399|Ga0134127_11518636Not Available743Open in IMG/M
3300010400|Ga0134122_12463452Not Available569Open in IMG/M
3300010401|Ga0134121_10061485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3096Open in IMG/M
3300010401|Ga0134121_12101408Not Available599Open in IMG/M
3300010401|Ga0134121_12652495Not Available545Open in IMG/M
3300010403|Ga0134123_11307460Not Available761Open in IMG/M
3300011422|Ga0137425_1006068All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2346Open in IMG/M
3300012961|Ga0164302_11276890Not Available592Open in IMG/M
3300014205|Ga0172380_10302720All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens1218Open in IMG/M
3300014205|Ga0172380_10532412Not Available865Open in IMG/M
3300014205|Ga0172380_10536674Not Available861Open in IMG/M
3300014205|Ga0172380_10622675Not Available787Open in IMG/M
3300014205|Ga0172380_10949185Not Available611Open in IMG/M
3300014205|Ga0172380_11262579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium → unclassified Cryobacterium → Cryobacterium sp. MDB2-A-2516Open in IMG/M
3300022173|Ga0181337_1000723All Organisms → cellular organisms → Bacteria3156Open in IMG/M
3300022894|Ga0247778_1001129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales14310Open in IMG/M
3300023069|Ga0247751_1000727All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM14173551Open in IMG/M
3300023266|Ga0247789_1000001All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae53166Open in IMG/M
3300023270|Ga0247784_1010113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2195Open in IMG/M
3300024219|Ga0247665_1002107Not Available2037Open in IMG/M
3300025735|Ga0207713_1195785Not Available622Open in IMG/M
3300025896|Ga0208916_10339930Not Available654Open in IMG/M
3300025899|Ga0207642_10086401All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas pseudopalustris1537Open in IMG/M
3300025900|Ga0207710_10000221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae49690Open in IMG/M
3300025900|Ga0207710_10000889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae15992Open in IMG/M
3300025910|Ga0207684_10120485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2249Open in IMG/M
3300025922|Ga0207646_10124168All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium2320Open in IMG/M
3300025922|Ga0207646_10186063All Organisms → cellular organisms → Bacteria1876Open in IMG/M
3300025922|Ga0207646_11600322Not Available562Open in IMG/M
3300025936|Ga0207670_10098582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2083Open in IMG/M
3300025949|Ga0207667_11611094All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300025961|Ga0207712_10611012Not Available944Open in IMG/M
3300025961|Ga0207712_12103802All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae505Open in IMG/M
3300026023|Ga0207677_10637260Not Available939Open in IMG/M
3300026035|Ga0207703_10401335Not Available1272Open in IMG/M
3300026035|Ga0207703_11645912All Organisms → cellular organisms → Bacteria → Terrabacteria group617Open in IMG/M
3300026118|Ga0207675_100013029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae7763Open in IMG/M
3300026121|Ga0207683_10332915All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium1392Open in IMG/M
3300027811|Ga0256868_10040761All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2148Open in IMG/M
3300028380|Ga0268265_10001525All Organisms → cellular organisms → Bacteria → Proteobacteria19297Open in IMG/M
3300028380|Ga0268265_10010783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium6170Open in IMG/M
3300028380|Ga0268265_10035417Not Available3647Open in IMG/M
3300028380|Ga0268265_10142312Not Available2009Open in IMG/M
3300028380|Ga0268265_10174443All Organisms → cellular organisms → Bacteria1841Open in IMG/M
3300028380|Ga0268265_10509895Not Available1135Open in IMG/M
3300028381|Ga0268264_10624856All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300028807|Ga0307305_10334520All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium687Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere29.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere20.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere10.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil7.00%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate6.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.00%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter2.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake1.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300014205Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaGEngineeredOpen in IMG/M
3300022173Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM15.D.DEnvironmentalOpen in IMG/M
3300022894Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5EnvironmentalOpen in IMG/M
3300023069Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5EnvironmentalOpen in IMG/M
3300023266Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4EnvironmentalOpen in IMG/M
3300023270Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5EnvironmentalOpen in IMG/M
3300024219Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06EnvironmentalOpen in IMG/M
3300025735Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027811Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeqEnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0982.000091802162886013Switchgrass RhizosphereVPTLVVEAECLAAVLMGSGNELSLLKIDGETITANLQPSRGRLVRGKFYRVTFEEMPLPE
Ga0065704_1066584123300005289Switchgrass RhizosphereMPPIVVEAECLAAVLMGSGLELSLLKSGIETITVNLQPSRGRLVRGKLYR
Ga0065705_1015593833300005294Switchgrass RhizosphereVPTLVVEAECLAAVLMGSGNELSLLKIDGETITANLQPSRGRLVRGKFYRVTFEEMPLPEG*
Ga0065707_1107252523300005295Switchgrass RhizosphereVPIVVEAECLAAVLMGSGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEMPRPEG
Ga0068868_10043957533300005338Miscanthus RhizosphereVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSEP*
Ga0070691_10000022633300005341Corn, Switchgrass And Miscanthus RhizosphereMPTLVVEAECLAAVLMGSGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEIPRPEG*
Ga0070691_1014042623300005341Corn, Switchgrass And Miscanthus RhizosphereVPTLVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRVTFEKIPKD*
Ga0070668_10058395533300005347Switchgrass RhizosphereMPTLVVEAECLAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRV
Ga0070688_100000583353300005365Switchgrass RhizosphereLLQRCCGIEVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHLSLGRLERGERYRVTFEKIPKD*
Ga0070703_1002563053300005406Corn, Switchgrass And Miscanthus RhizosphereVTALVVETECVAAVLMGSGNELSLLKIEGNTITTNLHPSLGRLERGELYRVTFEKISKDKPQC*
Ga0070703_1018122833300005406Corn, Switchgrass And Miscanthus RhizosphereVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRVTFEKIPKD*
Ga0070694_10012497733300005444Corn, Switchgrass And Miscanthus RhizosphereVPALVVETECVTAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSEP*
Ga0070663_10045808833300005455Corn RhizosphereMAAVLMGSGNELSLIKIDGESITANLQPSRGRLVRGKFYRVTFEEIPRPEG*
Ga0070706_10033845233300005467Corn, Switchgrass And Miscanthus RhizosphereMPGVVVEAECLAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPRPEG*
Ga0070706_10207073333300005467Corn, Switchgrass And Miscanthus RhizosphereVVEAECLAAVLMGSGNELSLLKIDGETITANLQPSRGRLVRGKFYRVTFEEIPRPEG*
Ga0070707_10001844123300005468Corn, Switchgrass And Miscanthus RhizosphereMPALVVEAECLAAVLMGSGNELSLLKIDGETITANLQPSRGRLVRGKFYRVTFEEMPLPEG*
Ga0070707_10005246213300005468Corn, Switchgrass And Miscanthus RhizosphereALVVEAECLAAVLMGSGNEISLLKVAGETITASLHPSRGRLQRGKFYRVTIEEIAPPPG*
Ga0070707_10098597423300005468Corn, Switchgrass And Miscanthus RhizosphereMAAVLMGSGLELSLLKSGTETITVNLQPSRGRLVRGKLYRVTFEEIPRPEG*
Ga0070698_10070541033300005471Corn, Switchgrass And Miscanthus RhizosphereVPIVVEAECLAAVLMGSGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEIPRPEG
Ga0070698_10109371223300005471Corn, Switchgrass And Miscanthus RhizosphereVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRVTFEKIPRPEG*
Ga0070698_10141219013300005471Corn, Switchgrass And Miscanthus RhizosphereMAAVLMGSGNELSLIKIDGESITANLQPSRGRLVRGKFYRVTFEEIEPWAQISGSG
Ga0070699_10158569233300005518Corn, Switchgrass And Miscanthus RhizosphereVVEAECLAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPRPEG*
Ga0070693_10036220933300005547Corn, Switchgrass And Miscanthus RhizosphereLLQRCYGIEVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSEP*
Ga0070704_10135900823300005549Corn, Switchgrass And Miscanthus RhizosphereMPSLVVEAECLAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPRPEG*
Ga0068859_100001138263300005617Switchgrass RhizosphereVDVFVVEPIECLAAVLMGSGNEISLLKRNGSTITTNLEPSLGRLVRGKRYRVTFEEIADSPGQP*
Ga0068859_10026663343300005617Switchgrass RhizosphereVPAPVVVMECLAAVLVGSGNELSLLKRNGNTITTNLDPSLGRLVRGKRYRVTFEEIADTPGQP*
Ga0068859_10090030933300005617Switchgrass RhizosphereVPAIVFETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPKDQPQC*
Ga0068859_10119511113300005617Switchgrass RhizosphereETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSEP*
Ga0068859_10139218933300005617Switchgrass RhizosphereVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVT
Ga0068859_10252596913300005617Switchgrass RhizosphereMPAPVVVMECMAAVLVGSGNELSLLKRNGNTITTNLEPSLGRLTRGKRYRVTFEEIADTPGQP*
Ga0068864_100000281313300005618Switchgrass RhizosphereMPAPVVEAECTAAVLMGSGNELSLLKRDGNSITANLDPSLGRLIRGKRYRVTFEEVADTPDQP*
Ga0068866_1090159813300005718Miscanthus RhizosphereSFTVIYAALTVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPKDQPQC*
Ga0068861_10004611443300005719Switchgrass RhizosphereVAALVVEAECLAAVLMGSGNEITLLKVAGETITASLHPSRGRLQRGKFYRVTIEEIAPPPG*
Ga0068861_10032995823300005719Switchgrass RhizosphereMPPIVVEAECLAAVLMGSGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEIPRPEG*
Ga0068858_10050338013300005842Switchgrass RhizosphereVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRV
Ga0068860_10027192223300005843Switchgrass RhizosphereMPTLVVEAECLAAVLMGSGLELSLLKTGIETITVNLQPSRGRLVRGKLYRVTIEEIEGKPQC*
Ga0068862_10002379223300005844Switchgrass RhizosphereMPPIVVEAECMAAVLMGSGLELSLLKSGTETITVNLQPSRGRLVRGKLYRVTIEEIEGKPQC*
Ga0068862_10003859033300005844Switchgrass RhizosphereVPALVVETECVAAVLMGSGNKLSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSEP*
Ga0068862_10004754653300005844Switchgrass RhizosphereMPPIVVEAECLAAVLMGSGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEIEGPTS*
Ga0068862_10014601253300005844Switchgrass RhizosphereMPGVVVEAECLAAVLMDSGNELSLLKSEGNTISANLHPSLGRLERGELYRVTFEKIPRPEG*
Ga0068862_10024275153300005844Switchgrass RhizosphereVPALVVEAECLAAVLMGSGNELSLLKRNGNTITTNLEPSLGRLTRGKRYRVTFEEIADTPGQP*
Ga0068862_10047236813300005844Switchgrass RhizosphereMPSLVVEAECLAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPR
Ga0068862_10117023813300005844Switchgrass RhizosphereALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSEP
Ga0068862_10266478723300005844Switchgrass RhizosphereMPTLVVEAECLAAVLMGSGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEMPRPEG*
Ga0075464_1028140843300006805AqueousCMAAVLVGSGNELSLLKFNGETITTNLQPSRGRLVRGKFYRVTFEKIPRPEG*
Ga0075464_1077533623300006805AqueousMAAVLMGSGQELSLLKIDSNSITTNLHPSLGKLERGERYRVTFEKLPRPEG*
Ga0075464_1109075723300006805AqueousMPALVVEAECMAAVLMGSGNELSLIKIDGETITANLQPSRGRLVRGKFYRVTFEEIEGKPQC*
Ga0105251_1022346133300009011Switchgrass RhizosphereSGWLASQLLPRLYFCGTEMPPVVVEAECLAAVLMGGGLELSLLKSGIETITVNLQPSRGRLVRGKIYRVTIEEMPRPEG*
Ga0105250_1020441823300009092Switchgrass RhizosphereMPTLVVEAECLAAVLMGSGLELILLKSGIETITVNLQPSRGRLVRGKLYRVTIEEMPRPEG*
Ga0105247_1161595613300009101Switchgrass RhizosphereVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRVT
Ga0105248_1252792623300009177Switchgrass RhizosphereVPTLVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSEP*
Ga0105249_1081169823300009553Switchgrass RhizosphereMAAVLMGSGLELSLLKSGTETITVNLQPSRGRLVRGKLYRVTIEEMPRPEG*
Ga0134124_1086439333300010397Terrestrial SoilMPPVVVEAECLAAVLMGGGLELSLLKSGIETITVNLQPSRGRLVRGKIYRVTIEEIEGPTS*
Ga0134127_1151863623300010399Terrestrial SoilVPALVVETECVAAVLMGSGNELSLLKIEGNTITTNLHPSLGRLERGELYRVTFEKISKDKPQC*
Ga0134122_1246345213300010400Terrestrial SoilVVEVECHAAVMMDSGNQLTLLKFENETITPSLNPSRGKLERGKFYRVTFEEIEGLTPC*
Ga0134121_1006148553300010401Terrestrial SoilVPVVVEAECIAAVLMGNGLHLSLLKIEGETITANLQPSRGRLERGKVYRVTFEEIPPGE*
Ga0134121_1210140823300010401Terrestrial SoilCWQSSCGTEMPPVVVEAECMAAVLMGNGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEMPRPEG*
Ga0134121_1265249513300010401Terrestrial SoilETECVVAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRVTFEKIPKD*
Ga0134123_1130746023300010403Terrestrial SoilVPALVVETECVAAVLMGSGNELSILKSEGNTITTNLHPSLGRLERGERYRVTFEKIPRPEG*
Ga0137425_100606823300011422SoilVPPIVVEAECIAAVLMGSGNELSLLKIEGETITANLQPSRGRLVRGKFYRVTFEELEGPPQC*
Ga0164302_1127689023300012961SoilVLTVVVEAECLAAVLMGGGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEMPRPEG*
Ga0172380_1030272023300014205Landfill LeachateVAALVVEAECLAAVLMGSGNELSLLKAAGESITTNLHPSRGGLVRGKFYRVTFEEIDPWEQTVIR*
Ga0172380_1053241233300014205Landfill LeachateMPALVVEAECLASVLMGSGNELSLLKFEGETITANLQPSRGRLVRGEFYRVTFEKIPRPE
Ga0172380_1053667413300014205Landfill LeachateMAAVLVGSGNELSLLKFNGETITANLQPSRGRLVRGKFYRVTFEEIEGEPQC*
Ga0172380_1062267533300014205Landfill LeachateGHFCSALTMPALVVEAECMAAVLMGSGNELSLIKIGGETITANLQPSRGRLVRGKFYRVTFEEIEGKPQC*
Ga0172380_1094918513300014205Landfill LeachateMAAGLMGSGNELSLIKIDGETITASLQPSRGRMVRGEFYRVTFEKIPRPEG*
Ga0172380_1126257913300014205Landfill LeachateMPALVVEAECMAAVLVGSGNELSLLKFNGETITASLQPSRGRLVRGKFYRVTFEEMPPP
Ga0181337_100072383300022173Freshwater LakeMAAVMINSGNELSLIKVDSEAITCSLKPSRGRLVRGKFYRVTFEEIACLSEPSSSSS
Ga0247778_1001129203300022894Plant LitterMTFVIEAECIAIVPLTDGNEMSLHKFNNESITASLQPSRGHLARGKFYRVTFEEIEGITQ
Ga0247751_100072773300023069SoilVEAECLAAVLMGSGQELSLLKIEGETITANLQPSRGRLVRGKFYRVTFEELPRPPEG
Ga0247789_100000163300023266SoilVPAVVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRVTFEKIPKD
Ga0247784_101011373300023270Plant LitterMPALVVEAECLAAVLMGSGNELSLLKINTETITANLQPSRGRLVRGRRYRVTFEEIE
Ga0247665_100210743300024219SoilMAAVLMGSGLELSLLKSGTETITVNLQPSRGRLVRGKLYRVTIEEIPRPEG
Ga0207713_119578533300025735Switchgrass RhizosphereYFCGTEMPPVVVEAECLAAVLMGGGLELSLLKSGIETITVNLQPSRGRLVRGKIYRVTIEEMPRPEG
Ga0208916_1033993023300025896AqueousMPALVVEAECMAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPKDQPQC
Ga0207642_1008640133300025899Miscanthus RhizosphereVPAIVFETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPKDQPQC
Ga0207710_10000221533300025900Switchgrass RhizosphereVAALVVEAECLAAVLMGSGNEITLLKVAGETITASLHPSRGRLQRGKFYRVTIEEIAPPP
Ga0207710_1000088993300025900Switchgrass RhizosphereVPTLVVEPIECMAAVLVGSGNELSLLKRNGNTITTNLDPSLGRLVRGKRYRVTFEEIESEEP
Ga0207684_1012048533300025910Corn, Switchgrass And Miscanthus RhizosphereMPGVVVEAECLAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGELYRVTFEKIPRPE
Ga0207646_1012416843300025922Corn, Switchgrass And Miscanthus RhizospherePGCAGDRRSDPVAALVVEAECLAAVLMGSGNEISLLKVAGETITASLHPSRGRLQRGKFYRVTIEEIAPPPG
Ga0207646_1018606343300025922Corn, Switchgrass And Miscanthus RhizosphereMPALVVEAECLAAVLMGSGNELSLLKIDGETITANLQPSRGRLVRGKFYRVTFEEMPLPE
Ga0207646_1160032223300025922Corn, Switchgrass And Miscanthus RhizosphereMPALVVETECVAAVLMGSGNELSLLKFDGNTITTNLHPSLGRLERGELYRVTFEKIPRPE
Ga0207670_1009858253300025936Switchgrass RhizosphereLLQRCYGIEVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSEP
Ga0207667_1161109423300025949Corn RhizosphereVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRVTFEKIPKD
Ga0207712_1061101233300025961Switchgrass RhizosphereMAAVLMGSGLELSLLKSGTETITVNLQPSRGRLVRGKLYRVTIEEMPRPEG
Ga0207712_1210380213300025961Switchgrass RhizospherePTLVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSE
Ga0207677_1063726023300026023Miscanthus RhizosphereVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGKVYRVTFEEMPCLSEP
Ga0207703_1040133523300026035Switchgrass RhizosphereVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRVTFEKIPKD
Ga0207703_1164591213300026035Switchgrass RhizosphereMPPVVVEAECLAAVLMGGGLELSLLKSGIETITVNLQPSRGRLVRGKIYRVTIEEIEGPT
Ga0207675_100013029113300026118Switchgrass RhizosphereMPPIVVEAECLAAVLMGSGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEIPRPE
Ga0207683_1033291513300026121Miscanthus RhizosphereLLQRCYGIEVPALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRV
Ga0256868_1004076133300027811SoilMPALVVEAECIAAVLMGSGNELSLIKTDGETITANLHPSRGRLVRGKFYRVTFEEIPCLPEPSSSSS
Ga0268265_10001525233300028380Switchgrass RhizosphereVPALVVEAECLAAVLMGSGNELSLLKRNGNTITTNLEPSLGRLTRGKRYRVTFEEIADTPGQP
Ga0268265_1001078353300028380Switchgrass RhizosphereMAAVLMGSGLELSLLKSGTETITVNLQPSRGRLVRGKLYRVTIEEIEGKPQC
Ga0268265_1003541753300028380Switchgrass RhizosphereMPPIVVEAECLAAVLMGSGLELSLLKSGIETITVNLQPSRGRLVRGKLYRVTIEEIEGPT
Ga0268265_1014231233300028380Switchgrass RhizosphereMPGVVVEAECLAAVLMDSGNELSLLKSEGNTISANLHPSLGRLERGELYRVTFEKIPRPE
Ga0268265_1017444313300028380Switchgrass RhizosphereALVVETECVAAVLMGSGNELSLLKSEGNTITTNLHPSLGRLERGERYRVTFEKIPRPEG
Ga0268265_1050989533300028380Switchgrass RhizosphereVPAPVVVMECLAAVLVGSGNELSLLKRNGNTITTNLEPSLGRLTRGKRYRVTFEEIADTPGHP
Ga0268264_1062485623300028381Switchgrass RhizosphereMPTLVVEAECLAAVLMGSGLELSLLKTGIETITVNLQPSRGRLVRGKLYRVTIEEIEGKPQC
Ga0307305_1033452033300028807SoilECVAAVMIVRSNELSLLKIDGETITASLQPSRGRLVRGKFYRVTFEELPRPEG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.