Metagenome Family F104700

Basic Information
Family ID	F104700
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	70 residues
Representative Sequence	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Number of Associated Samples	69
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	74.00 %
% of genes near scaffold ends (potentially truncated)	26.00 %
% of genes from short scaffolds (< 2000 bps)	70.00 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Duplodnaviria (90.000 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (23.000 % of family members)
Environment Ontology (ENVO)	Unclassified (59.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (65.000 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92 1B570J29032_1088204112 2B570J29032_1098743815 3JGI25908J49247_101003032 4Ga0049081_100071058 5Ga0049081_100112675 6Ga0049081_100407426 7Ga0049081_101071812 8Ga0049081_102204811 9Ga0049080_101038513 10Ga0049080_102045913 11Ga0049080_102606502 12Ga0075470_100469864 13Ga0075464_110974323 14Ga0102861_10064281 15Ga0102861_10891381 16Ga0102861_12358022 17Ga0102828_10014294 18Ga0102855_12057962 19Ga0105747_10046439 20Ga0105748_104206331 21Ga0114363_10070228 22Ga0114880_10223104 23Ga0114880_10859213 24Ga0114880_11065012 25Ga0114880_12743111 26Ga0114980_103404182 27Ga0114977_107644201 28Ga0114978_100844113 29Ga0114975_100417526 30Ga0105097_102822252 31Ga0114969_105082461 32Ga0114974_100444703 33Ga0114974_104611063 34Ga0114976_103089192 35Ga0133913_103685987 36Ga0139557_10014794 37Ga0153698_163920 38Ga0153698_193520 39Ga0153805_10565792 40Ga0153801_10017739 41Ga0153801_10304472 42Ga0157210_10059495 43Ga0177922_100185505 44Ga0181364_10155192 45Ga0181347_10999552 46Ga0181362_10118182 47Ga0181365_10226872 48Ga0181365_10476312 49Ga0181365_10495031 50Ga0181344_10098613 51Ga0181356_10656794 52Ga0181356_11395022 53Ga0181348_10815342 54Ga0181348_10858082 55Ga0181359_10877653 56Ga0181359_11828093 57Ga0208364_10124022 58Ga0207942_10507582 59Ga0208600_10170272 60Ga0222714_100741917 61Ga0222714_104446231 62Ga0222712_100352246 63Ga0181353_10213883 64Ga0181353_10557581 65Ga0181353_10636193 66Ga0181351_10374514 67Ga0181351_11710431 68Ga0244775_101093307 69Ga0244775_105536542 70Ga0244775_108827544 71Ga0208800_10515632 72Ga0208926_10019052 73Ga0208555_10045052 74Ga0208974_10189434 75Ga0208133_10958831 76Ga0208975_12095062 77Ga0209599_100062366 78Ga0209492_11851541 79Ga0209087_10618852 80Ga0209596_12777262 81Ga0209134_100001095 82Ga0209500_101926523 83Ga0209246_101569631 84Ga0209246_102607461 85Ga0209107_104221401 86Ga0209354_100460935 87Ga0209191_10390486 88Ga0247723_10604893 89Ga0315291_102924263 90Ga0315293_103386173 91Ga0315293_104435843 92Ga0315909_1001298721 93Ga0315909_100346798 94Ga0315274_113771342 95Ga0315274_115958581 96Ga0315905_114015342 97Ga0334987_0004917_10347_10556 98Ga0334987_0125113_1744_1926 99Ga0334995_0377524_316_525 100Ga0335036_0461472_1_204
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92 1B570J29032_1088204112 2Ga0049080_102606502 3Ga0105747_10046439 4Ga0114880_12743111 5Ga0114974_104611063 6Ga0114976_103089192 7Ga0153805_10565792 8Ga0177922_100185505 9Ga0334987_0125113_1744_1926
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92 1B570J29032_1088204112 2Ga0049080_102606502 3Ga0105747_10046439 4Ga0114880_12743111 5Ga0114974_104611063 6Ga0114976_103089192 7Ga0153805_10565792 8Ga0177922_100185505 9Ga0334987_0125113_1744_1926
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.25% β-sheet: 31.88% Coil/Unstructured: 60.87%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF02767	DNA_pol3_beta_2	6.00
PF03237	Terminase_6N	2.00
PF02592	Vut_1	1.00
PF13884	Peptidase_S74	1.00
PF13392	HNH_3	1.00
PF00182	Glyco_hydro_19	1.00
PF06378	DUF1071	1.00
PF07120	DUF1376	1.00
PF05127	Helicase_RecD	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	6.00
COG1444	tRNA(Met) C34 N-acetyltransferase TmcA	Translation, ribosomal structure and biogenesis [J]	1.00
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	1.00
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	1.00
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	1.00
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	1.00

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.00 %
Unclassified	root	N/A	2.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	7.00 %
Unclassified	root	N/A	2.00 %
Viruses	superkingdom	All Organisms → Viruses	91.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.00 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.00 %
Unclassified	root	N/A	2.00 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.00 %
Unclassified	root	N/A	2.00 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.00 %
Unclassified	root	N/A	2.00 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	90.00 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.00 %
Unclassified	root	N/A	2.00 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	86.00 %
Maxrubnervirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Maxrubnervirus	1.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.00 %
Unclassified	root	N/A	2.00 %

Name	Rank	Taxonomy	Distribution
Maxrubnervirus PMBT3	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Maxrubnervirus → Maxrubnervirus PMBT3	1.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.00 %
Unclassified	root	N/A	2.00 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	86.00 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002408\|B570J29032_108820411	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	517	Open in IMG/M
3300002408\|B570J29032_109874381	All Organisms → cellular organisms → Bacteria → Proteobacteria	1854	Open in IMG/M
3300003277\|JGI25908J49247_10100303	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	698	Open in IMG/M
3300005581\|Ga0049081_10007105	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4237	Open in IMG/M
3300005581\|Ga0049081_10011267	All Organisms → cellular organisms → Bacteria → Proteobacteria	3379	Open in IMG/M
3300005581\|Ga0049081_10040742	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1763	Open in IMG/M
3300005581\|Ga0049081_10107181	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1039	Open in IMG/M
3300005581\|Ga0049081_10220481	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	674	Open in IMG/M
3300005582\|Ga0049080_10103851	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	966	Open in IMG/M
3300005582\|Ga0049080_10204591	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	652	Open in IMG/M

Showing 1 to 10 of 100 entries

Previous1 2 3 4 5…10Next

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.00%
Terrestrial	Environmental → Terrestrial	2.00%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.00%
Freshwater	Environmental → Aquatic → Freshwater	79.00%
Marine	Environmental → Aquatic → Marine	19.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	4.00%
Ice	Environmental → Aquatic → Freshwater → Ice	2.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.00%
Lake	Environmental → Aquatic → Freshwater → Lake	30.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	39.00%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.00%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.00%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.00%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.00%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.00%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.00%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	35.00%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	25.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.00%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.00%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.00%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.00%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.00%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.00%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	4.00%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.00%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.00%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.00%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	3.00%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.00%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.00%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	1.00%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	23.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	13.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.00%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	10.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.00%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.00%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	1.00%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M

Showing 1 to 10 of 69 entries

Previous1 2 3 4 5 6 7Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1088204112	3300002408	Freshwater	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWEQL*
B570J29032_1098743815	3300002408	Freshwater	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEKL*
JGI25908J49247_101003032	3300003277	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDKWIQL*
Ga0049081_100071058	3300005581	Freshwater Lentic	MKLEKISLCGGFNGLYMPHPLGREKFGYFLVTDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL*
Ga0049081_100112675	3300005581	Freshwater Lentic	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQM*
Ga0049081_100407426	3300005581	Freshwater Lentic	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQTPIVGEKCAIGWYTDDAQFLGYLDVDKWIQL*
Ga0049081_101071812	3300005581	Freshwater Lentic	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL*
Ga0049081_102204811	3300005581	Freshwater Lentic	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL*
Ga0049080_101038513	3300005582	Freshwater Lentic	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL*
Ga0049080_102045913	3300005582	Freshwater Lentic	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDKWEQL*
Ga0049080_102606502	3300005582	Freshwater Lentic	MKLEIISTGGGFNGLCLPHPLGKKNYGYFLITDSLGEQPPVKGQKCAIGWYTDDSEFLGYLDIDSWDGLPS*
Ga0075470_100469864	3300006030	Aqueous	MKLETISTGGGFNALYMPHPLGRKNFGYFLITNSSGEQPPIVGQKCAIGWYTDDAQFLGYLDVNQWEQM*
Ga0075464_110974323	3300006805	Aqueous	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQ
Ga0102861_10064281	3300007544	Estuarine	LETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFSGYLDVDQWEQL*
Ga0102861_10891381	3300007544	Estuarine	MNVLIIGQFLDKGQKMKLETISLCGGFNGLYMPHPLGRKKYGYFLITNSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWIQL*
Ga0102861_12358022	3300007544	Estuarine	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWIQL*
Ga0102828_10014294	3300007559	Estuarine	MKLETISLCGGFNGVYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDSQFLGYLDVDQWEQM*
Ga0102855_12057962	3300007647	Estuarine	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWEQL*
Ga0105747_10046439	3300007974	Estuary Water	MNVLIIGQFLDKGQKMKLETISLCGGFNGLYMPHPLGRKKYGYFLITNSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWI
Ga0105748_104206331	3300007992	Estuary Water	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGY
Ga0114363_10070228	3300008266	Freshwater, Plankton	MELEIISTGGGFNGLCLPHPLGRKNYGYFLITDSSGEQPPVKGQKCAIGWYTDDSEFLGYLDIDSWDGLPS*
Ga0114880_10223104	3300008450	Freshwater Lake	MKLEIISTGGGFNGLSMPHPLGKDYGYFLITDSSGEQPPINGGKAIIGWYTSDSEFLGYLDIKQWDDFSS*
Ga0114880_10859213	3300008450	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQM*
Ga0114880_11065012	3300008450	Freshwater Lake	MNVLIIGQSQDKGQRMKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL*
Ga0114880_12743111	3300008450	Freshwater Lake	GGFNGLSMPHPLGRENCGYFLITDESGEQPPINGGKAIIGWYTKDSEFLGYLDIQKWDGLPS*
Ga0114980_103404182	3300009152	Freshwater Lake	MNVLTIGQSLDKGQRMKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL*
Ga0114977_107644201	3300009158	Freshwater Lake	KLETISLCGGFNGLYMPHPLGRKKYGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL*
Ga0114978_100844113	3300009159	Freshwater Lake	MNVLIIGQSLDKGQKMKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWEEL*
Ga0114975_100417526	3300009164	Freshwater Lake	MNVLIIGQSLDKGQRMKLETISLCGGFNGLYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL*
Ga0105097_102822252	3300009169	Freshwater Sediment	MKLEIISTGGGFNGLSMPHPLGKDYGYFLITDSSGEQPPIIGGKAIIGWYTSDSEFLGYLDIQQWDGLPS*
Ga0114969_105082461	3300009181	Freshwater Lake	NGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL*
Ga0114974_100444703	3300009183	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQM*
Ga0114974_104611063	3300009183	Freshwater Lake	MELETISTCGGFNALYMPHPLGRANCGYFLITDETGEQPPVKGGRAAIGWYTDDMQFLGYLDINLWDGIPA*
Ga0114976_103089192	3300009184	Freshwater Lake	MELEVTSTGGGFNALYMPHPLGRYQFGFFLITNSLGEQPPIKGEKCIISWYTNDAEFLGTLDVDKWHGFPS*
Ga0133913_103685987	3300010885	Freshwater Lake	MELEVTSTGGGFNALYMPHPLGRYQFGFFLITNSLGEQPPIKGEKCIISWYTNDAEFLGTLDVDKWHGFPF*
Ga0139557_10014794	3300011010	Freshwater	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWE*
Ga0153698_163920	3300011335	Freshwater	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDRWIQL*
Ga0153698_193520	3300011335	Freshwater	MKLETISRGGFNGLYMTHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL*
Ga0153805_10565792	3300012013	Surface Ice	MFWLNKGFTMKISKLIDVDPSTKLETISTCGGFNALYFPHPLGREKYGYYLITDAFGEQPPVAGEKCTLGKFTDDAQFEGYMDIDKWEGL*
Ga0153801_10017739	3300012017	Freshwater	MKISKLIDVDPSTKLETISTCGGFNALYFPHPLGREKYGYYLITDAFGEQPPVAGEKCTLGKFTDDAQFEGYMDIDKWEGL*
Ga0153801_10304472	3300012017	Freshwater	LIDVDPSTKLETISTCGGFNALYFPHPLGREKYGYYLITDAFGEQPPVAGEKCTLGKYTDDAQFEGYMDIDKWEGL*
Ga0157210_10059495	3300012665	Freshwater	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWIQL*
Ga0177922_100185505	3300013372	Freshwater	STCGGFNALYFPHPLGREKYGYYLITDAFGEQPPVAGEKCTLGKYTDDAQFEGYMDIDKWEGL*
Ga0181364_10155192	3300017701	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDKWIQL
Ga0181347_10999552	3300017722	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEKL
Ga0181362_10118182	3300017723	Freshwater Lake	MKLETISLCGGFNCLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0181365_10226872	3300017736	Freshwater Lake	MKISKLIDVDPNTKLETISTCGGFNALYFPHPLGREKYGYYLITDAFGEQPPVAGEKCTLGKFTDDAQFEGYMDIEKWEGL
Ga0181365_10476312	3300017736	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQVLGYLDVDQLEQL
Ga0181365_10495031	3300017736	Freshwater Lake	MKLETISLCGGFNGLYMPHPLCREKYGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL
Ga0181344_10098613	3300017754	Freshwater Lake	MKLEIISTGGGFNGLSMPHPLGREKCGYFLITDESGEQPPINGGKAIIGWYTKDSEFLGYLDIQQWDGLPS
Ga0181356_10656794	3300017761	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDV
Ga0181356_11395022	3300017761	Freshwater Lake	MKISKLIDVDPSTELETISTCGGFNALYFPHPLGREKYGYYLITDAFGEQPPVAGEKCTLGKFTDDAQFEGYMDIDKWEGL
Ga0181348_10815342	3300017784	Freshwater Lake	MKISKLIDVDPNTKLETISTCGGFNALYFPHPLGREKYGYYLIIDAFGEQPPVTGEKCTLGKFTDDAQFEGYMDIDKWEGL
Ga0181348_10858082	3300017784	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGKQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0181359_10877653	3300019784	Freshwater Lake	MKISKLIDVDPSTELETISTCGGFNALYFPHPLGREKYGYYLITDAFGEQPPVAGEKCTLGKFTDDAQFEGYMDIEKWEGL
Ga0181359_11828093	3300019784	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDKWIQL
Ga0208364_10124022	3300020533	Freshwater	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEKL
Ga0207942_10507582	3300020549	Freshwater	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0208600_10170272	3300020550	Freshwater	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0222714_100741917	3300021961	Estuarine Water	LCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0222714_104446231	3300021961	Estuarine Water	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQ
Ga0222712_100352246	3300021963	Estuarine Water	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQM
Ga0181353_10213883	3300022179	Freshwater Lake	MKLETISTGGGFNGLSMPHPLGREKCGYFLITDESGEQPPINGGKAIIGWYTKDSEFLGYLDIQKWDGLPS
Ga0181353_10557581	3300022179	Freshwater Lake	KLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL
Ga0181353_10636193	3300022179	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL
Ga0181351_10374514	3300022407	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDKWIQL
Ga0181351_11710431	3300022407	Freshwater Lake	LNKGFTMKISKLIDVDPNTKLETISTCGGFNALYFPHPLGREKYGYYLITDAFGEQPPVAGEKCTLGKFTDDAQFEGYMDIEKWEGL
Ga0244775_101093307	3300024346	Estuarine	MKLETISFCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0244775_105536542	3300024346	Estuarine	MKLETISLCGGFNGVYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDSQFLGYLDVDQWEQM
Ga0244775_108827544	3300024346	Estuarine	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWE
Ga0208800_10515632	3300027193	Estuarine	MKLETISFCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQM
Ga0208926_10019052	3300027205	Estuarine	MNVLIIGQFLDKGQKMKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWIQL
Ga0208555_10045052	3300027213	Estuarine	MNVLIIGQFLDKGQKMKLETISLCGGFNGLYMPHPLGRKKYGYFLITNSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWIQL
Ga0208974_10189434	3300027608	Freshwater Lentic	MKLEKISLCGGFNGLYMPHPLGREKFGYFLVTDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL
Ga0208133_10958831	3300027631	Estuarine	MKLETISLCGGFNGVYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDSQFLGYLDVDQWEQL
Ga0208975_12095062	3300027659	Freshwater Lentic	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQTPIVGEKCAIGWYTDDAQFLGYLDVDKWIQL
Ga0209599_100062366	3300027710	Deep Subsurface	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWIQL
Ga0209492_11851541	3300027721	Freshwater Sediment	MKLEIISTGGGFNGLSMPHPLGKDYGYFLITDSSGEQPPIIGGKAIIGWYTSDSEFLGYLDIQQWDGLPS
Ga0209087_10618852	3300027734	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0209596_12777262	3300027754	Freshwater Lake	NGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL
Ga0209134_100001095	3300027764	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0209500_101926523	3300027782	Freshwater Lake	MNVLIIGQSLDKGQKMKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWEEL
Ga0209246_101569631	3300027785	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFL
Ga0209246_102607461	3300027785	Freshwater Lake	GFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQM
Ga0209107_104221401	3300027797	Freshwater And Sediment	TISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDKWEQL
Ga0209354_100460935	3300027808	Freshwater Lake	MKLETISLCGGFNGLYMPHPLGREKYGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWIQL
Ga0209191_10390486	3300027969	Freshwater Lake	MNVLIIGQSLDKGQRMKLETISLCGGFNGLYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0247723_10604893	3300028025	Deep Subsurface Sediment	LCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0315291_102924263	3300031707	Sediment	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDSQFLGYLDVDQWEQL
Ga0315293_103386173	3300031746	Sediment	ETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWEQL
Ga0315293_104435843	3300031746	Sediment	MKLETISLCGGFNGLYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDSQFLGYLDVDQWEQL
Ga0315909_1001298721	3300031857	Freshwater	MKLEIISTGGGFNGLSMPHPLGKDYGYFLITDSSGEQPPINGGKAIIGWYTSDSEFLGYLDIKQWDDFSS
Ga0315909_100346798	3300031857	Freshwater	MELEIISTGGGFNGLCLPHPLGRKNYGYFLITDSSGEQPPVKGQKCAIGWYTDDSEFLGYLDIDSWDGLPS
Ga0315274_113771342	3300031999	Sediment	MKLETISLCGGFNGLYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWE
Ga0315274_115958581	3300031999	Sediment	MKLETISLCGGFNGLYMPHPLGRKKYGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQ
Ga0315905_114015342	3300032092	Freshwater	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGQKCAIGWYTDDAQFLGYLDVDQWQQL
Ga0334987_0004917_10347_10556	3300034061	Freshwater	MKLETISTCGGFNALYMPHPLGRKNFGYFLITDSSGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWEKL
Ga0334987_0125113_1744_1926	3300034061	Freshwater	MKLEIISTGGGFNGLSMPHPLGKDYGYFLITDSSGEQPPIIGGKAIIGWYTSDSEFLGYL
Ga0334995_0377524_316_525	3300034062	Freshwater	MKLETISTCGGFNALYMPHPLGREKFGYFLITDSSGEQPPIVGEKCAIGWYTDDAQFLGYLDVDQWEKL
Ga0335036_0461472_1_204	3300034106	Freshwater	MKLETISLCGGFNGLYMPHPLGREKFGYFLITDSMGEQPPIVGEKCAIGWYTDDAQFLGYLDVDKWIQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104700

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences