NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F104662

Metagenome Family F104662

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104662
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 121 residues
Representative Sequence MRTLRLPVGALLVALMLGAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYAGGELVGTLDKSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL
Number of Associated Samples 86
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 68.69 %
% of genes near scaffold ends (potentially truncated) 48.00 %
% of genes from short scaffolds (< 2000 bps) 93.00 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (54.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(19.000 % of family members)
Environment Ontology (ENVO) Unclassified
(26.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 11.69%    β-sheet: 47.40%    Coil/Unstructured: 40.91%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF06348DUF1059 29.00
PF00486Trans_reg_C 16.00
PF03704BTAD 7.00
PF07883Cupin_2 6.00
PF13240zinc_ribbon_2 1.00
PF01321Creatinase_N 1.00
PF00196GerE 1.00
PF02072Orexin 1.00
PF07676PD40 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG3629DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domainTranscription [K] 7.00
COG3947Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domainsTranscription [K] 7.00
COG0006Xaa-Pro aminopeptidaseAmino acid transport and metabolism [E] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.00 %
UnclassifiedrootN/A45.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100695540Not Available520Open in IMG/M
3300000956|JGI10216J12902_100446242Not Available619Open in IMG/M
3300003321|soilH1_10101543Not Available2179Open in IMG/M
3300003990|Ga0055455_10034727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1321Open in IMG/M
3300004114|Ga0062593_103344332Not Available514Open in IMG/M
3300004156|Ga0062589_102915100Not Available500Open in IMG/M
3300004463|Ga0063356_100675951All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300004479|Ga0062595_101617152Not Available605Open in IMG/M
3300004643|Ga0062591_101392494Not Available695Open in IMG/M
3300005347|Ga0070668_101572545Not Available602Open in IMG/M
3300005356|Ga0070674_101198074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium674Open in IMG/M
3300005364|Ga0070673_102161055Not Available529Open in IMG/M
3300005441|Ga0070700_101397331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium592Open in IMG/M
3300005456|Ga0070678_101921424All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005457|Ga0070662_100792723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium805Open in IMG/M
3300005458|Ga0070681_10737973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium901Open in IMG/M
3300005459|Ga0068867_101369061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia655Open in IMG/M
3300005471|Ga0070698_100663028Not Available985Open in IMG/M
3300005529|Ga0070741_10170795All Organisms → cellular organisms → Bacteria2153Open in IMG/M
3300005546|Ga0070696_100751763Not Available799Open in IMG/M
3300005548|Ga0070665_101541539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium673Open in IMG/M
3300005549|Ga0070704_100923655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium786Open in IMG/M
3300005840|Ga0068870_11144987Not Available561Open in IMG/M
3300005844|Ga0068862_101641777Not Available650Open in IMG/M
3300005985|Ga0081539_10093467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1549Open in IMG/M
3300006058|Ga0075432_10069294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1265Open in IMG/M
3300006058|Ga0075432_10406884Not Available589Open in IMG/M
3300006844|Ga0075428_100498059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1304Open in IMG/M
3300006847|Ga0075431_100486073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1227Open in IMG/M
3300006852|Ga0075433_10972407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium740Open in IMG/M
3300006852|Ga0075433_11447834Not Available594Open in IMG/M
3300006854|Ga0075425_100277852All Organisms → cellular organisms → Bacteria1928Open in IMG/M
3300006854|Ga0075425_100378696All Organisms → cellular organisms → Bacteria1630Open in IMG/M
3300006871|Ga0075434_100250897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1789Open in IMG/M
3300006904|Ga0075424_100616507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1159Open in IMG/M
3300006904|Ga0075424_100886288All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300006954|Ga0079219_11356615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium631Open in IMG/M
3300006954|Ga0079219_12350814All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Solanales → Solanaceae → Solanoideae → Solaneae → Solanum → Solanum tuberosum516Open in IMG/M
3300007076|Ga0075435_100972817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium741Open in IMG/M
3300009081|Ga0105098_10164450Not Available1005Open in IMG/M
3300009093|Ga0105240_11749439Not Available648Open in IMG/M
3300009094|Ga0111539_10427034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1543Open in IMG/M
3300009100|Ga0075418_11170137Not Available833Open in IMG/M
3300009137|Ga0066709_101443282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium997Open in IMG/M
3300009146|Ga0105091_10142882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1118Open in IMG/M
3300009147|Ga0114129_10176904All Organisms → cellular organisms → Bacteria2906Open in IMG/M
3300009147|Ga0114129_10274792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2253Open in IMG/M
3300009156|Ga0111538_13968356Not Available511Open in IMG/M
3300009553|Ga0105249_11403010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium770Open in IMG/M
3300009800|Ga0105069_1048596Not Available530Open in IMG/M
3300010359|Ga0126376_11812066Not Available648Open in IMG/M
3300010399|Ga0134127_11802571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium688Open in IMG/M
3300011119|Ga0105246_10392885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1150Open in IMG/M
3300011422|Ga0137425_1167391Not Available548Open in IMG/M
3300011439|Ga0137432_1141769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium770Open in IMG/M
3300012204|Ga0137374_10026551All Organisms → cellular organisms → Bacteria6435Open in IMG/M
3300012507|Ga0157342_1074066Not Available523Open in IMG/M
3300012897|Ga0157285_10028036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1249Open in IMG/M
3300012912|Ga0157306_10055484All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300012943|Ga0164241_10200819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1426Open in IMG/M
3300012986|Ga0164304_10780857Not Available735Open in IMG/M
3300013308|Ga0157375_12378182Not Available632Open in IMG/M
3300014326|Ga0157380_11062131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium847Open in IMG/M
3300015200|Ga0173480_10867160Not Available583Open in IMG/M
3300015371|Ga0132258_10887243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2251Open in IMG/M
3300015374|Ga0132255_104761061Not Available575Open in IMG/M
3300015374|Ga0132255_105074000Not Available557Open in IMG/M
3300017965|Ga0190266_10987304Not Available562Open in IMG/M
3300018466|Ga0190268_11101944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300018469|Ga0190270_11466301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium730Open in IMG/M
3300018476|Ga0190274_10389061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1346Open in IMG/M
3300018476|Ga0190274_12979840Not Available568Open in IMG/M
3300018481|Ga0190271_10340540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1577Open in IMG/M
3300018481|Ga0190271_10850928Not Available1036Open in IMG/M
3300018481|Ga0190271_13752856Not Available508Open in IMG/M
3300025552|Ga0210142_1051132Not Available799Open in IMG/M
3300025899|Ga0207642_10559029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium707Open in IMG/M
3300025972|Ga0207668_11336341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300026121|Ga0207683_11043492Not Available759Open in IMG/M
(restricted) 3300027799|Ga0233416_10158722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium775Open in IMG/M
3300027907|Ga0207428_10243011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1344Open in IMG/M
3300027907|Ga0207428_10859076Not Available642Open in IMG/M
(restricted) 3300028043|Ga0233417_10348010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium676Open in IMG/M
3300028592|Ga0247822_10643637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium852Open in IMG/M
3300028596|Ga0247821_11260341Not Available504Open in IMG/M
3300028608|Ga0247819_10874501Not Available561Open in IMG/M
3300028889|Ga0247827_11114856Not Available543Open in IMG/M
3300030336|Ga0247826_10211175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1336Open in IMG/M
3300031562|Ga0310886_10977255Not Available542Open in IMG/M
3300031720|Ga0307469_11163145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium728Open in IMG/M
3300031858|Ga0310892_10276616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1048Open in IMG/M
3300031940|Ga0310901_10360335Not Available625Open in IMG/M
3300032013|Ga0310906_10485825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium833Open in IMG/M
3300032013|Ga0310906_10854284Not Available646Open in IMG/M
3300032075|Ga0310890_10352327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1077Open in IMG/M
3300032075|Ga0310890_11170847Not Available625Open in IMG/M
3300033550|Ga0247829_10835772Not Available767Open in IMG/M
3300033551|Ga0247830_10411579All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300033551|Ga0247830_11658633Not Available512Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere19.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil15.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.00%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.00%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.00%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.00%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009800Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027799 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MGEnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10069554023300000364SoilVGALLVALMLGAVLAVGASATPVAKTVATVECQGASATLLMHPGGGGKAIWDISVENVQNAPSYLIKRVEGXFYXGGXXVGTLDXSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
JGI10216J12902_10044624223300000956SoilMRAQRLPVGVLLLVALLLSAVLAVGASATPVPRTVATVECEGASARLLMHPGEGGTAIWDISVESVQNAPSYLIKRVEGTFYAGGEPVGTLDKSLGQKTGFGEPLTCAFEVHKPGIDVYGTLTLARL*
soilH1_1010154323300003321Sugarcane Root And Bulk SoilMRTLRLPVGALLVALALGAVLAVGASATPVAKTVATVECQGASATLLMHPGEGGKAIWDISVESVQDAPSYLIKRVEGSFYVSGELVGTLDKSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVRL*
Ga0055455_1003472723300003990Natural And Restored WetlandsMRMLGLPGGAILVALTLGAVLAVAASATPVPKTVATVECQGASATLLMHPGEGGKAIWDISVDSVENAPSYLIKRVEGSFYSGGELVGTLDKSVGEKTGFGEPLTCAFEVHKPGIDVYGTLTLVRL*
Ga0062593_10334433213300004114SoilMRTRRVPVVALLVGLLLSAVLAVGASATPVARTVATVECEGASATLLMHPGGGGKAIWDISLESVQNAPSYLLKRVEGTFYVEGEVVGTLDDSVGQKAGFG
Ga0062589_10291510013300004156SoilMRTLRLPLGALLAALMLGAVLAVGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVDGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDAYGTLTLVQLR*
Ga0063356_10067595133300004463Arabidopsis Thaliana RhizosphereMRTLRLPLGALLAALMLGAVLAVGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVDGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR*
Ga0062595_10161715213300004479SoilLGAVLAVGASATPVAKTVATVECQGASATLLMHPGESGKAIWDISAESVQNAPSYLIKRVEGNFFVNGELVGTLDNSVGQKTGFGQPLICAFEVHKNGFDVYGTLTLVRL*
Ga0062591_10139249413300004643SoilMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVDGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDAYGTLTLVQLR*
Ga0070668_10157254513300005347Switchgrass RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVGGVVVGTLDDSVGQKTGFGEPLTCAFEVHKNGVDVYGTLTLVGL*
Ga0070674_10119807413300005356Miscanthus RhizosphereMRTLRLPVWALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGNVFASGELVGTLDKSVGNKTGFGEPLACAFEVHRNGFDVYGTLHLVRL*
Ga0070673_10216105513300005364Switchgrass RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECQGDSATLLMHPGGGGKAIWDISLESVQNAPSYLIKRVEGRFYAGGELVGTLDDSVGQKTGFGEPLTCAFEVHKPG
Ga0070700_10139733113300005441Corn, Switchgrass And Miscanthus RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQDAPSFLIKRVEATFYVGGEPVGAIDNSVGQKTGFGEDEQ
Ga0070678_10192142413300005456Miscanthus RhizosphereMRTLRSPIAALLLTLMLGAVLAGGASATPIAKTVATVECQGASATLLMHPGEGGKAIWDISVDSVQNAPSYLIKRVEGNFYAGGELVGTLDKSVGQKTGFGEPLTCAFEVHKNGVDVYGTLTLVGL*
Ga0070662_10079272313300005457Corn RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISVESVENAPSYLIKRVEGTFYVDGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR*
Ga0070681_1073797313300005458Corn RhizosphereMRTLRLSVGALLVALMLSAVLAVGASATPVAKTVATVECQGSSATLLMHPGEGGKALWDISVESVQNAPSYLIKHIEGNFFVNGELVGTLDKSLGNKTGFGEPITCAFEVHKDGFDVYGTVQVVPL*
Ga0068867_10136906123300005459Miscanthus RhizosphereMRTLRSPIAALLLTLMLGAVLVGGASATPIAKTVATVECQDASATLLMHPGGGGTAIWDISVGSVQDAPSYLMKRVEGSFYAGGELVGTLDKSLGRKTGFGEPLTCAFEVHKPGVDAYGTLTLVRL*
Ga0070698_10066302833300005471Corn, Switchgrass And Miscanthus RhizosphereMRTLRLPAGALLVALMLSAVLAVGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYAGGELVGTLDKSAGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0070741_1017079553300005529Surface SoilMRALRLQAGALLVALMLAAVLAVGVPATPVPRTVATVACEGASATLLMHPGGGGTAIWDISVESVQDAPSYLIKRVEGTFYSGGEVVGTLDKSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVRL*
Ga0070696_10075176313300005546Corn, Switchgrass And Miscanthus RhizosphereMRTLRLSVGALLVVLMLGAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYAVGELVGTLDKSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0070665_10154153913300005548Switchgrass RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGTSATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVGGVVVGTLDNSVGQKTGFGEPLTCAFEV
Ga0070704_10092365523300005549Corn, Switchgrass And Miscanthus RhizosphereMRTLRLPVGALLVVLMSAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYADGVPVGTLDKSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0068870_1114498723300005840Miscanthus RhizosphereRSIGRDMFCDKPRAAGGDPSLVSAWARKGDRMRTRRLPVGALLVALMLSAVLAVGASATPVAKTVAMVECQGASATLLMHPGGGGKAIWDISVDSVQNAPSFLIKRVEATFYVGGEPVGAIDNSVGQKTGFGEDEQVTCEFEVHKDGVDAYGTLHLVRLR*
Ga0068862_10164177713300005844Switchgrass RhizosphereMLGAVLAVGASATPVAKTVATVECQGASATLLMHPGNGGKAIWDISLESVQNAPSYLIKRVEGTFYVGGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDAYGTLTLVQLR*
Ga0081539_1009346723300005985Tabebuia Heterophylla RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECQGAAATLLMHPGEGGKAIWDISVESVQDAPSYLIKRVEGNVYASGELVGTLDKSVGQKTGFGEPLTCAFEVHRNGFDVYGTLHLVRL*
Ga0075432_1006929423300006058Populus RhizosphereMRTLRLPVGALLVALMLGAILAVGAAATPVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNTPSYLIKRVEGNVYVSGELVGTLDKSVGNKTGLGEPLICAFEVHRNGFDVYGTLHLVRL*
Ga0075432_1040688413300006058Populus RhizosphereGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYLGGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR*
Ga0075428_10049805923300006844Populus RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNTPSYLIKRVEGNVYVSGELVGTLDKSVGNKTGFGEPLICAFEVHRNGFDVYGTLHLVRL*
Ga0075431_10048607323300006847Populus RhizosphereMRTLRLSVGALLVALMLGAVLAVGASATPVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNTPSYLIKRVEGNVYVSGELVGTLDKSVGNKTGFGEPLICAFEVHRNGFDVYGTLHLVRL*
Ga0075433_1097240713300006852Populus RhizosphereMRTLRLSVGALLVALMLGAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYAGGELVGTLDKSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0075433_1144783433300006852Populus RhizosphereVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNTPSYLIKRVEGNVYVSGELVGTLDKSVGNKTGFGEPLICAFEVHRNGFDVYGTLHLVRL*
Ga0075425_10027785243300006854Populus RhizosphereMRTLRLPVGALLVALMLGAVLAVGAAATPVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNTPSYLIKRVEGNVYVSGELVGTLDKSVGNKTGFGEPLICAFEVHRNGFDVYGTLHLVRL*
Ga0075425_10037869623300006854Populus RhizosphereMRTPRLSVGALLVALMLGAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYAGGELVGTLDKSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0075434_10025089733300006871Populus RhizosphereMRTLRLPVGALLVALMLGAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYAGGELVGTLDKSAGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0075424_10061650723300006904Populus RhizosphereMRTLRLPVGALLVALMLGAVLAVGAAATPVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNTPSYLIKRVEGNVYVSGELVGTLDKSVGNKTGFGEPLICAFEVHRNGFDVYGT
Ga0075424_10088628833300006904Populus RhizosphereMRTLRLPVGALLVALMLGAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYAGGELVGTLDKSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0079219_1135661523300006954Agricultural SoilAAPVAKTVATVECAGASATVLMHPGEGGKAIWDISAESVQNAPSYLIKRIEGNVFVGGELIATLGTSLGSKTGFGEPLTCAFEVHRDGFDVFGTLQLVRL*
Ga0079219_1235081413300006954Agricultural SoilSIGCDMFCDKPRAAGGDPSVVSAWARKGDGMRTLRLSVGALLVALMLGAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYAGGELVGTLDKSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVQL*
Ga0075435_10097281723300007076Populus RhizosphereMRTLRLPVGALLVALMLGAVLAVGAAATPVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNTPSYLIKRVEGNVYVSGELVGTLDKSVGNKTGFGEPLICAFEVHRNGFDVYGTLHL
Ga0105098_1016445023300009081Freshwater SedimentMRTLRLPVGALLVALMLGAVLAVGASATPVAKTVATVACEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVSGEVVGTLDDSVGQKTGFGEPLTCAFEVHKDGLDVYGTLHLVQLR*
Ga0105240_1174943923300009093Corn RhizosphereMQTLRFPIGAVLVALMLGAVLAVGASATPVAKTVATVECQGSSATLLMHPGEGGKALWDISVESVQNAPSYLIKHIEGNFFVNGELVGTLDKSLGNKTGFGEPITCAFEVHKDGFDVYGTVQVVPL*
Ga0111539_1042703413300009094Populus RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYLGGVVVGTLDNTVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLV
Ga0075418_1117013713300009100Populus RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYLGGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR*
Ga0066709_10144328223300009137Grasslands SoilMLGAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYAGGELVGTLDKSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0105091_1014288223300009146Freshwater SedimentMRTLRLPVGALLVALMLGAVLAVGASATPVAKTVATVACEGASATLLMHPGGGGKAIWDISVESVQNAPSYLSKRVEGTFYVSGEVVGTLDNSVGQKTGFGEPLTCAFEVHKD
Ga0114129_1017690413300009147Populus RhizosphereMLGAVLAVGAAATPVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNTPSYLIKRVEGNVYVSGELVGTLDKSVGNKTGFGEPLICAFEVHRNGFDVYGTLHLVRL*
Ga0114129_1027479223300009147Populus RhizosphereMRTLRLSVGPLLVALMLGAVLAVGASATPVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNAPSYLITRVEGNVYVSGELVGTLDKSVGNKTGFGE
Ga0105243_1043452013300009148Miscanthus RhizosphereVAARGETKKIEMRPLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECQGASATLLMHPGEGGKAIWEISAESVQNAPSYLIKRVEGTFYADGVPVGTLDKSV
Ga0111538_1396835623300009156Populus RhizosphereVAKTVATVECQGAAATLLMHPGEGGKAIWEISAESVQNAPSYLIKRVEGSFYVGGELVGTLDKSAGQKTGFGEPLACAFEVHKNGVDVYGTLTLVRL*
Ga0105249_1140301023300009553Switchgrass RhizosphereMFGDKPRAAGGDASVVSAWAQKGDRMRTLRLPVGALLVAMMLSAVLAVGASATPVAKTVATVECEGASATLLMQPGGGGKAIWDISVESVENAPSYLIKRVEGTFYVDGVVVGTLDNSVGQKTGFGEPLTCAFEVHKNGVDVYGTLTLVGL*
Ga0105069_104859623300009800Groundwater SandVAKTVATVECQGASATLLMHPGEGGKAIWDISVESVQDAPSYLIKRVEGTFFVSGVVAGTLDKSVGQKTGLGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0126376_1181206613300010359Tropical Forest SoilMRTLRLPVGVLLVALMLGAGLAVGASATPVAKTVATVECQGASATLLMHPGEGGKTIWDISDESVQNAPSYLIKRVEGNVFVGGELVGTLDKSVGNKTGFGEPLTCAFEVHRNGFDVYGTLTLAQFTRP*
Ga0134127_1180257123300010399Terrestrial SoilMRALRLPVGALLVALMLGAVLAVGASATPVARTVAEVSCEGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYVGGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDVY
Ga0105246_1039288523300011119Miscanthus RhizosphereAVLAVGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVGGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR*
Ga0137425_116739113300011422SoilMRTLRLPVGALLVALILSAVLAVGASATPVAKTVATVECQGASATLLMHPGGGGKAIWDISLESVQNAPSYLIKRVEGTFFVGGEVVGTLDNSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTL
Ga0137432_114176913300011439SoilMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVACEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEATFYAGGEVVGTLDNSVGQKTGFGEPLTCAFEV
Ga0137374_1002655123300012204Vadose Zone SoilMRTLRLPVGALLVALMLGAVLAVSASAAPVATTVATVECQGASATLLMHPGEGGKALWDISDESVQNAPSYLIKRVEGNVFASGELVGTLDKSVGQKTGFGEPLTCAFEVHRNGFDVYGTLHLVRL*
Ga0157342_107406613300012507Arabidopsis RhizosphereVALLLSAVLAVGASATPVAKTVATVECQGASATLLMHPGESGKAIWDISAESVQNAPSYLIKRVEGNFFVNGELVGTLDNSVGQKTGFGEPLICAFEVHKN
Ga0157285_1002803613300012897SoilMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVGGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR*
Ga0157306_1005548413300012912SoilMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVGGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDAYGTLTLVQLR*
Ga0164241_1020081923300012943SoilMRTLRLPVGALVVALLLGAVLAVGASATPVAKTVATVECQGASATLLMHPGESGKAIWDISAETVQDAPSYLIKRVEGNVFASGELVGTLDKSVGNKTGFGEPLICAFEVHRNGFDVYGTLTLVRF*
Ga0164304_1078085723300012986SoilMRTLRLSVGALLVAMMLSAVLAVGASATPVARTVATVECQGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYAGGELVGTLDKSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVQLR*
Ga0157375_1237818213300013308Miscanthus RhizospherePRAAGGDPSVAARGRDKEIEMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECQDASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFFVGGVVVGTLDDSVGQKTGFGEPLTCAFEVHKPGIDAYGTLTLVQLR*
Ga0157380_1106213123300014326Switchgrass RhizosphereMFCDKPRAAGGDPSVVSAWARKGDQMRTLRSPIAALLLTLMLGAVLVGGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISIESVQNAPSYLIKRVEGTFYAGGEVVGTLDDSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLVRL*
Ga0173480_1086716013300015200SoilVGVKGDEMRTLRLPLGALLAALMLGAVLAVGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVDGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDAYGTLTLVQLR*
Ga0132258_1088724323300015371Arabidopsis RhizosphereMRTLRLPVGALLVALMLGAVLAVGASATPVATTVATVECQGASATLLMHPGEGGKAIWDISDESVQNAPSYLIKRVEGTFYVSGVVVGTLDNSVGNKTGFGEDEQVTCAFEVHKDGFDVYGTLHLVRLR*
Ga0132255_10476106123300015374Arabidopsis RhizosphereAKTVATVECQGSSATLLMHPGEGGKAIWDISVESVQNAPSYLIKRVEGSFFAGGELVGTLDKSVGKKTGFGEPLTCAFEVHKPGVDVYGTLTLVRR*
Ga0132255_10507400023300015374Arabidopsis RhizosphereALMLAAVLAVGASATPVARTVAEVSCEGASATLLMHPGNGGKAIWDISLESVQNAPTYLIKRVEATFYVDGVAVGSFDNSVGQKTGFGEPLICDFEVHKPGIDAIGKLTLVQLP*
Ga0190266_1098730413300017965SoilMRTLRLSVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYAGGEVVGTLDNSVGQKTGFGEPLTCAFEVHKPGVDVYGTLTLARL
Ga0190268_1110194423300018466SoilMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECQGASATLLMHPGGGGKAIWDISVESVQDAPSFLIKRVEATFYVGGEPVGAIDNSVGQKTGFG
Ga0190270_1146630123300018469SoilMRALRLPVGALLVALMLGAVLAVGASATPVAKTVATVACQGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEATFYAGGVVVGTLDNSVGQKTGF
Ga0190274_1038906123300018476SoilMRTLRLPVGALLVALMLGAVLAVGASATPVAKTVATVACEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEVTFYVNGEVVGTADNSVGQKTGFGEPLTCAFEVHKPGIDAYGTLTLVRL
Ga0190274_1297984013300018476SoilVLAAGASATPVARTVATVQCEDTSVTLLMHPGGGGKAIWDISVESVQHAPSYLIKRVEATFYAGGEVVGTLDNSVGQKTGFGEPLTCAFEVHKNGVDVYGTLTLVGL
Ga0190271_1034054033300018481SoilMRTLRLPVGALLVALVLGAVLAVGASATPVAKTTVECEGASATLLLMHPGMGGKAIWDISVESVQDAPSYLIKRVEGIVYDPSGEPVGTLDKSAGQKTGFGEPLTCAFEVHWNDGFYVQATLHLVRL
Ga0190271_1085092833300018481SoilALMLGAVLAVGASATPVAKTVATVACEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEVTFYVNGEVVGTADNSVGQKTGFGEPLTCAFEVHKPGVDAYGTLTLVRL
Ga0190271_1375285613300018481SoilMRTLRLPVGALLVALMLGAVLAVGASATPVAKTVAMVECQGASATLLMHPGGGGKAIWDISVESVQDAPSYLIKRVEGTFYVSGEVVGTLDDSVGQKTGF
Ga0210142_105113213300025552Natural And Restored WetlandsMRMLGLPGGAILVALTLGAVLAVAASATPVPKTVATVECQGASATLLMHPGEGGKAIWDISVDSVENAPSYLIKRVEGSFYSGGELVGTLDKSVGEKTGFGEPLTCAFEVHKPGIDVYGTLTLVRL
Ga0207642_1055902923300025899Miscanthus RhizosphereMRTLRLPAGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVEAVQDTHNYLIKRVEGTFYVGGVVVGTLDNSVGQKTGFGEPLTCAFEVH
Ga0207668_1133634113300025972Switchgrass RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVDGVVVGTLDNSVGQKTGFGEPLTCA
Ga0207683_1104349213300026121Miscanthus RhizosphereMRTLRSPIAALLLTLMLGAVLAGGASATPIAKTVATVECQGASATLLMHPGEGGKAIWDISVDSVQNAPSYLIKRVEGNFYAGGELVGTLDKSVGQKTGFGEPLTCAFEVHKNGVDVYGTLTLVGL
(restricted) Ga0233416_1015872223300027799SedimentMRTLRLPVGALLVALMLGAVLAVGASATPVARTTVECQGASATLLLMHPGGGGKAVWDIESAQDAPSYLIKRVEGIVYDPNGEPVGTLDKSVGEKTGFGEPLTCEFEVHWDDGFYVRAT
Ga0207428_1024301123300027907Populus RhizosphereMRTLRLPVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATMLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYLGGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR
Ga0207428_1085907613300027907Populus RhizosphereMRTLRLPVGALLVALMLGAVLAVGAAATPVAKTVATVECQGASATLLMHPGEGGKAIWDISDESVQNTPSYLIKRVEGNVYVSGELVGTLDKSVGNKTGFGEPLICAFEVHRNGFDVYGTLHLVRL
(restricted) Ga0233417_1034801023300028043SedimentMRTLRLPVGALLVALMLGAVLAVGASATPVARTTVECQGASATLLLMHPGGGGKAVWDIESAQDAPSYLIKRVEGIVYDPNGEPVGTLDKSVGEKTGFGEPLTCEFEVHW
Ga0247822_1064363723300028592SoilMRTRRLPFGALLVALLLAAVLAVGASATPVPKTVATVECEGASATLLMHPGGGGTAIWDISVGSVQDAPSYLMKRVEGSFYAGGELVGTLDKSLGRKTGFGEPLTCAFEVHKPGVDAYGTLTLVRL
Ga0247821_1126034113300028596SoilMRALRLPVGALVVALMLGAVLAVGASATPVARTVAEVSCEGASATLLMHPGNGGKAIWDISLESVQNAPSYLIKRVEATFYVDGVAVGSFDNSVGQKTGFGEPLICDFEVHKPGIDAIGKLTLVQLP
Ga0247819_1087450123300028608SoilSAVLAVGASATPVAKTVATVECQGASATLLMHPGGSGKAIWDISDESVQNAPSYLIKRVEGSFYVSGELVGTLDKSVGQKTGFGEPLTCAFEVHKDGFDVYGTLHLVRL
Ga0247827_1111485623300028889SoilATPVPKTVATVECEGASATLLMHPGGGGTAIWDISVGSVQDAPSYLMKRVEGSFYAGGELVGTLDKSLGRKTGFGEPLTCAFEVHKPGVDAYGTLTLVRL
Ga0247826_1021117513300030336SoilMRALRLPVGALVVALMLGAVLAVGASATPVARTVAEVSCEGASATLLMHPGNGGKAIWDISLDSVQNAPSYLIKRVEATFYVAGVAVGSFDSSVGQKTGFGEPLICDFEVHKPGIDAIGKLTLVQLP
Ga0310886_1097725513300031562SoilMRTLRLSVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATLLMHPGGGGTAIWDISVGSVQDAPSYLMKRVEGSFYAGGELVGTLDKSLGRKTGFGEPLTCAFEVHKPGVDAYGTLTLVR
Ga0307469_1116314513300031720Hardwood Forest SoilMRTLRLPVGALLIALMLGAVLAAGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISTESVQNSPNYLIMRVEANFYVSGELVGTSDKSVGQKTGFGEPLTCAFEVHKDGFDVYGTLQLVRL
Ga0310892_1027661633300031858SoilLVALMLSAVLAIGASAAPVAKTVATVACEGASATLLMHPGGGGKAIWDISLESVQNAPSYLIKRVEGTFFVGGVVVGTLDDSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR
Ga0310901_1036033523300031940SoilVVSAWTREGDRMRTRRLPFGALLVALLLAAVLAVGASATPVPKTVATVECEGASATLLMHPGGGGQAIWDISVESVQNAPSYLIKRVEGTFYVGGEVVGTLDNSVGQKTGFGEALTCAFEVHKPGIDVYGTLTLVQLR
Ga0310906_1048582523300032013SoilVVALMLGAVLAVGASATPVARTVAEVSCEGASATLLMHPGNGGKAIWDISLESVQNAPSYLTKRVEATFYVDGVAVGSFDNSVGQKTGFGEPLICDFEVHKPGIDAIGKLTLVQLP
Ga0310906_1085428413300032013SoilRMRTLRLSVGALLVALMLSAVLAVGASATPVAKTVATVECEGASATLLMHPGGGGKAIWDISVESVQNAPSYLIKRVEGTFYVGGVVVGTLDNSVGQKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR
Ga0310890_1035232713300032075SoilVPKTVATVECEGASATLLMHPGGGGTAIWDISVGSVQDAPSYLMKRVEGSFYAGGELVGTLDKSLGRKTGFGEPLTCAFEVHKPGIDVYGTLTLVQLR
Ga0310890_1117084713300032075SoilGKGDRMRALRLPVGALVVALMLGAVLAVGASATPVARTVAEVSCEGASATLLMHPGNGGKAIWDISLESVQNAPSYLIKRVEATFYVDGVAVGSFDNSVGQKTGFGEPLICDFEVHKPGIDAIGKLTLVQLP
Ga0247829_1083577223300033550SoilVVALMLGAVLAVGASATPVARTVAEVSCEGASATLLMHPGNGGKAIWDISLESVQNAPSYLIKRVEATFYVDGVAVGSFDNSVGQKTGFGEPLICDFEVHKPGIDAIGKLTLVQLP
Ga0247830_1041157933300033551SoilALLVALLLAAVLAVGASATPVPKTVATVECEGASATLLMHPGGGGTAIWDISVGSVQDAPSYLMKRVEGSFYAGGELVGTLDKSLGRKTGFGEPLTCAFEVHKPGVDAYGTLTLVRL
Ga0247830_1165863313300033551SoilMRALRLPVGALVVALMLGAVLAVGASATPVARTVAEVSCEGASATLLMHPGNGGKAIWDISLESVQNAPSYLIKRVEATFYVDGVAVGSFDNSVGQKTGFGEPLICDFEVHKPGIDAIGKLTLVQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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