Metagenome / Metatranscriptome Family F104638

Basic Information
Family ID	F104638
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	72 residues
Representative Sequence	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARITENDFEAYKRMVLNEIGDAVE
Number of Associated Samples	38
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	30.00 %
% of genes from short scaffolds (< 2000 bps)	88.00 %
Associated GOLD sequencing projects	35
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (99.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat (76.000 % of family members)
Environment Ontology (ENVO)	Unclassified (99.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (76.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 89.04% β-sheet: 0.00% Coil/Unstructured: 10.96%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF09250	Prim-Pol	11.00
PF00149	Metallophos	2.00
PF13529	Peptidase_C39_2	1.00
PF00271	Helicase_C	1.00
PF00772	DnaB	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
All Organisms	root	All Organisms	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
cellular organisms	root	All Organisms → cellular organisms	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002493\|JGI24185J35167_1073991	Not Available	616	Open in IMG/M
3300002493\|JGI24185J35167_1084534	Not Available	553	Open in IMG/M
3300002920\|Pfga_1082714	Not Available	584	Open in IMG/M
3300005452\|Ga0068706_1000492	Not Available	19218	Open in IMG/M
3300005452\|Ga0068706_1013067	Not Available	2064	Open in IMG/M
3300005452\|Ga0068706_1036871	Not Available	954	Open in IMG/M
3300005453\|Ga0068705_10059857	Not Available	1165	Open in IMG/M
3300005453\|Ga0068705_10087444	Not Available	863	Open in IMG/M
3300005453\|Ga0068705_10094131	Not Available	816	Open in IMG/M
3300005453\|Ga0068705_10163182	Not Available	548	Open in IMG/M
3300005453\|Ga0068705_10186117	Not Available	504	Open in IMG/M
3300005453\|Ga0068705_10186778	Not Available	503	Open in IMG/M
3300006849\|Ga0102029_1286670	Not Available	508	Open in IMG/M
3300010190\|Ga0124925_1154176	Not Available	653	Open in IMG/M
3300010255\|Ga0124910_1079598	Not Available	907	Open in IMG/M
3300026237\|Ga0209750_1024611	Not Available	1246	Open in IMG/M
3300026280\|Ga0209017_10006431	Not Available	4964	Open in IMG/M
3300026509\|Ga0209809_1058127	Not Available	1141	Open in IMG/M
3300026509\|Ga0209809_1060642	Not Available	1103	Open in IMG/M
3300026509\|Ga0209809_1081990	Not Available	869	Open in IMG/M
3300026509\|Ga0209809_1100517	Not Available	736	Open in IMG/M
3300026509\|Ga0209809_1111910	Not Available	674	Open in IMG/M
3300026509\|Ga0209809_1153604	Not Available	512	Open in IMG/M
3300027279\|Ga0209691_1012771	Not Available	2461	Open in IMG/M
3300031245\|Ga0308395_1009864	Not Available	3826	Open in IMG/M
3300031245\|Ga0308395_1019148	Not Available	2315	Open in IMG/M
3300031245\|Ga0308395_1053332	Not Available	1048	Open in IMG/M
3300031245\|Ga0308395_1110349	Not Available	621	Open in IMG/M
3300031508\|Ga0308394_1048813	Not Available	1000	Open in IMG/M
3300031509\|Ga0308399_1022904	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300031512\|Ga0308397_1081355	Not Available	721	Open in IMG/M
3300031513\|Ga0308412_1045760	Not Available	1547	Open in IMG/M
3300031513\|Ga0308412_1047192	Not Available	1512	Open in IMG/M
3300031513\|Ga0308412_1058037	Not Available	1300	Open in IMG/M
3300031513\|Ga0308412_1058616	Not Available	1291	Open in IMG/M
3300031513\|Ga0308412_1180946	Not Available	578	Open in IMG/M
3300031513\|Ga0308412_1187176	Not Available	565	Open in IMG/M
3300031513\|Ga0308412_1204680	Not Available	532	Open in IMG/M
3300031513\|Ga0308412_1214395	Not Available	516	Open in IMG/M
3300031514\|Ga0308390_1032995	Not Available	1505	Open in IMG/M
3300031515\|Ga0308396_1086437	Not Available	643	Open in IMG/M
3300031516\|Ga0308398_1006516	Not Available	4501	Open in IMG/M
3300031516\|Ga0308398_1016573	Not Available	2300	Open in IMG/M
3300031516\|Ga0308398_1048242	Not Available	1065	Open in IMG/M
3300031516\|Ga0308398_1086670	Not Available	701	Open in IMG/M
3300031568\|Ga0308393_1042109	Not Available	1096	Open in IMG/M
3300031767\|Ga0308401_1022638	Not Available	1391	Open in IMG/M
3300031767\|Ga0308401_1029666	Not Available	1176	Open in IMG/M
3300031776\|Ga0308415_1012430	Not Available	2716	Open in IMG/M
3300031783\|Ga0308418_1073382	Not Available	783	Open in IMG/M
3300031783\|Ga0308418_1082978	Not Available	720	Open in IMG/M
3300031812\|Ga0308411_10057140	Not Available	1717	Open in IMG/M
3300031812\|Ga0308411_10061998	Not Available	1611	Open in IMG/M
3300031812\|Ga0308411_10088093	Not Available	1227	Open in IMG/M
3300031812\|Ga0308411_10106394	Not Available	1064	Open in IMG/M
3300031812\|Ga0308411_10109549	Not Available	1041	Open in IMG/M
3300031812\|Ga0308411_10135348	Not Available	891	Open in IMG/M
3300031812\|Ga0308411_10156146	Not Available	804	Open in IMG/M
3300031812\|Ga0308411_10167444	Not Available	765	Open in IMG/M
3300031812\|Ga0308411_10180338	Not Available	726	Open in IMG/M
3300031812\|Ga0308411_10180767	Not Available	725	Open in IMG/M
3300031812\|Ga0308411_10220332	Not Available	633	Open in IMG/M
3300031812\|Ga0308411_10247108	Not Available	586	Open in IMG/M
3300031812\|Ga0308411_10252298	Not Available	578	Open in IMG/M
3300031812\|Ga0308411_10262129	Not Available	564	Open in IMG/M
3300031830\|Ga0308409_1019881	Not Available	1940	Open in IMG/M
3300031830\|Ga0308409_1081812	Not Available	740	Open in IMG/M
3300031865\|Ga0308408_1058217	Not Available	925	Open in IMG/M
3300031875\|Ga0308405_1044990	Not Available	1247	Open in IMG/M
3300031875\|Ga0308405_1106190	Not Available	677	Open in IMG/M
3300031878\|Ga0308404_1000541	Not Available	11528	Open in IMG/M
3300031948\|Ga0308406_1035949	Not Available	1182	Open in IMG/M
3300031948\|Ga0308406_1061492	Not Available	821	Open in IMG/M
3300031950\|Ga0308417_1108862	Not Available	972	Open in IMG/M
3300031950\|Ga0308417_1116880	Not Available	923	Open in IMG/M
3300031950\|Ga0308417_1128453	Not Available	861	Open in IMG/M
3300031950\|Ga0308417_1138841	Not Available	812	Open in IMG/M
3300031950\|Ga0308417_1150439	Not Available	766	Open in IMG/M
3300031950\|Ga0308417_1165993	Not Available	713	Open in IMG/M
3300031950\|Ga0308417_1175064	Not Available	686	Open in IMG/M
3300031950\|Ga0308417_1188091	Not Available	652	Open in IMG/M
3300031950\|Ga0308417_1197276	Not Available	631	Open in IMG/M
3300031958\|Ga0308410_1021604	Not Available	2600	Open in IMG/M
3300031958\|Ga0308410_1115514	Not Available	733	Open in IMG/M
3300031958\|Ga0308410_1165118	Not Available	572	Open in IMG/M
3300031958\|Ga0308410_1170327	Not Available	560	Open in IMG/M
3300032033\|Ga0308402_1046838	Not Available	867	Open in IMG/M
3300032034\|Ga0308407_1078112	Not Available	700	Open in IMG/M
3300032045\|Ga0308400_1003725	Not Available	4361	Open in IMG/M
3300032045\|Ga0308400_1047253	Not Available	970	Open in IMG/M
3300032045\|Ga0308400_1047348	Not Available	969	Open in IMG/M
3300032045\|Ga0308400_1075822	Not Available	707	Open in IMG/M
3300032045\|Ga0308400_1097725	Not Available	599	Open in IMG/M
3300032045\|Ga0308400_1098225	Not Available	597	Open in IMG/M
3300032058\|Ga0308419_1076768	Not Available	1033	Open in IMG/M
3300032058\|Ga0308419_1089179	Not Available	914	Open in IMG/M
3300032356\|Ga0308414_1120674	Not Available	880	Open in IMG/M
3300033886\|Ga0308413_141700	Not Available	569	Open in IMG/M
3300033886\|Ga0308413_158008	Not Available	528	Open in IMG/M
3300034648\|Ga0372970_010174	Not Available	1797	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Thermal Springs	Environmental → Aquatic → Thermal Springs	100.00%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	99.00%
Unclassified	Environmental → Aquatic → Thermal Springs → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	99.00%
Unclassified	Environmental → Aquatic → Thermal Springs → Unclassified → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Hot Spring Phototrophic Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat	76.00%
Anoxygenic And Chlorotrophic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic	16.00%
Anoxygenic And Chlorotrophic Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat	7.00%
Hot Springs	Environmental → Aquatic → Thermal Springs → Unclassified → Unclassified → Hot Springs	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002493	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS undermat 2012	Environmental	Open in IMG/M
3300002920	Hot springs microbial communities from Mammoth Hot Springs, Yellowstone National Park, Wyoming, USA-MHS Pond Facies_Gas lift	Environmental	Open in IMG/M
3300005452	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG	Environmental	Open in IMG/M
3300005453	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG	Environmental	Open in IMG/M
3300006849	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1600(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010190	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1400(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010255	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300026237	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012 (SPAdes)	Environmental	Open in IMG/M
3300026280	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS undermat 2012 (SPAdes)	Environmental	Open in IMG/M
3300026509	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG (SPAdes)	Environmental	Open in IMG/M
3300027279	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG (SPAdes)	Environmental	Open in IMG/M
3300031245	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_P4	Environmental	Open in IMG/M
3300031508	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_me2	Environmental	Open in IMG/M
3300031509	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-60	Environmental	Open in IMG/M
3300031512	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T8	Environmental	Open in IMG/M
3300031513	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST1-BottomLayer	Environmental	Open in IMG/M
3300031514	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_149	Environmental	Open in IMG/M
3300031515	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_Pe2	Environmental	Open in IMG/M
3300031516	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T9	Environmental	Open in IMG/M
3300031568	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_ee2	Environmental	Open in IMG/M
3300031767	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M1	Environmental	Open in IMG/M
3300031776	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS55	Environmental	Open in IMG/M
3300031783	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090729_R4cd	Environmental	Open in IMG/M
3300031812	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-BottomLayer	Environmental	Open in IMG/M
3300031830	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe4	Environmental	Open in IMG/M
3300031865	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe3	Environmental	Open in IMG/M
3300031875	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MS13	Environmental	Open in IMG/M
3300031878	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M4	Environmental	Open in IMG/M
3300031948	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe1	Environmental	Open in IMG/M
3300031950	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS65	Environmental	Open in IMG/M
3300031958	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-MatCore	Environmental	Open in IMG/M
3300032033	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M2	Environmental	Open in IMG/M
3300032034	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe2	Environmental	Open in IMG/M
3300032045	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-65	Environmental	Open in IMG/M
3300032058	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS50	Environmental	Open in IMG/M
3300032356	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS50	Environmental	Open in IMG/M
3300033886	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090729_t10cd	Environmental	Open in IMG/M
3300034648	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1000_MSt9 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24185J35167_10739911	3300002493	Anoxygenic And Chlorotrophic Microbial Mat	SDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALISYRDDFMQRAHIAENDFVAYKNMVLSEIGDAVE*
JGI24185J35167_10845341	3300002493	Anoxygenic And Chlorotrophic Microbial Mat	AIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Pfga_10827142	3300002920	Hot Springs	MNDKNDMIMAALLAIDQLAVQFAVLDEIYPDFGELSDALISYRDDFMRRARIAENDFEAYKRMVLSEIGDAVE*
Ga0068706_100049216	3300005452	Anoxygenic And Chlorotrophic	MNDKKDMILAALLTLDQLAVQFAVLDEIYPDFRALSKAFISYRDDLMRRADVSENDFEAYKRMVLNEIGDAVE*
Ga0068706_10130675	3300005452	Anoxygenic And Chlorotrophic	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE*
Ga0068706_10368712	3300005452	Anoxygenic And Chlorotrophic	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRGLSEALIGYRDDFMQRAHIAENDFAAYKRMVLNEIGDAVE*
Ga0068705_100598572	3300005453	Anoxygenic And Chlorotrophic	MSDKKDMILATLLAIDQLAVQFAVLDEIYPDFRELSEALISYRDDFMRRARITENDFEAYKRMVLNEIGDAVE*
Ga0068705_100874441	3300005453	Anoxygenic And Chlorotrophic	MSDKNDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARITENDFEAYKRMVLNEIGDAVE*
Ga0068705_100941312	3300005453	Anoxygenic And Chlorotrophic	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARIAENDFEAYKRMVLNEIGDAVERE*
Ga0068705_101631822	3300005453	Anoxygenic And Chlorotrophic	IDQLAVQFAVLDEIYPDFRELSEAFIGYRDDLIRRACITENDFEAYKRMVLNEIGYAVERE*
Ga0068705_101861171	3300005453	Anoxygenic And Chlorotrophic	MNDKNDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE*
Ga0068705_101867782	3300005453	Anoxygenic And Chlorotrophic	LLAIDQLAVQFAVLDEIYLDFRELSEALIGYRDDFMRRARITENDFEAYKRMVLNEIGDAVE*
Ga0102029_12866701	3300006849	Anoxygenic And Chlorotrophic Microbial Mat	DMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE*
Ga0124925_11541762	3300010190	Anoxygenic And Chlorotrophic Microbial Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARIAENDFVAYKNMVLNEIGNAME*
Ga0124910_10795982	3300010255	Anoxygenic And Chlorotrophic Microbial Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRDLSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE*
Ga0209750_10246112	3300026237	Anoxygenic And Chlorotrophic Microbial Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFGELSEALISYRDDLMRRARIAENDFVAYKNMVLNEIGNAME
Ga0209017_100064312	3300026280	Anoxygenic And Chlorotrophic Microbial Mat	MNDKKDMILAALLTLDQLAVQFAVLDEIYPDFRALSKAFISYRDDLMRRADVSENDFEAYKRMVLNEIGDAVE
Ga0209809_10581273	3300026509	Anoxygenic And Chlorotrophic	MNDKNDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0209809_10606423	3300026509	Anoxygenic And Chlorotrophic	MSDKNDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARITENDFEAYKRMVLNEIGDAVE
Ga0209809_10819902	3300026509	Anoxygenic And Chlorotrophic	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARIAENDFEAYKRMVLNEIGDAVERE
Ga0209809_11005171	3300026509	Anoxygenic And Chlorotrophic	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEAFIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0209809_11119102	3300026509	Anoxygenic And Chlorotrophic	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKR
Ga0209809_11536041	3300026509	Anoxygenic And Chlorotrophic	LAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAV
Ga0209691_10127713	3300027279	Anoxygenic And Chlorotrophic	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRGLSEALIGYRDDFMQRAHIAENDFAAYKRMVLNEIGDAVE
Ga0308395_10098643	3300031245	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARIAENDFVAYKNMVLNEIGNAME
Ga0308395_10191483	3300031245	Hot Spring Phototrophic Mat	MSDKDDMILAALLALDQLAVQFAVLDEIYPDFRQLSEALISYRDDLMRRARIAENDFEAYKRMVLNEIGDAVERE
Ga0308395_10533321	3300031245	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPYFRELSEALIGYRDDLMRRARIAENDFEAYKRMVLNEIGDAVERE
Ga0308395_11103492	3300031245	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308394_10488132	3300031508	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRACITENDFEAYKRMVLNEIGYAVERE
Ga0308399_10229042	3300031509	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARITENDFEAYKRMVLNEIGDAVE
Ga0308397_10813552	3300031512	Hot Spring Phototrophic Mat	DMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRACITENDFEAYKRMVLNEIGYAVERE
Ga0308412_10457602	3300031513	Hot Spring Phototrophic Mat	MSDKNDMILAALLAIDQLAVQFAVLDEIYPDFKELSEALIGYRDDFMRRARITENDFEAYKRMVLNEIGDAVE
Ga0308412_10471922	3300031513	Hot Spring Phototrophic Mat	MNDKNDMILAALLAIDQLAVQFAVLDEIYPDFGELSEALIGYRDDFMRRAGVAENNFEAYKRMVLNEIGDAVE
Ga0308412_10580371	3300031513	Hot Spring Phototrophic Mat	DEIYPDFRELSEALIGYRDDFIRRARITENDFEAYKRMVLNEIGSDAVE
Ga0308412_10586162	3300031513	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALISYRDDFMQRAHIAENDFVAYKNMVLSEIGDAVE
Ga0308412_11809461	3300031513	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRDLSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308412_11871761	3300031513	Hot Spring Phototrophic Mat	HQNHPQQMSDKKDMILAALLAIDQLAVQFAVLDEIYPDFDELSKALIGYRDDLMRRARIAENDFVAYKNMVLNEIGGDAVE
Ga0308412_12046802	3300031513	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARIEERDFVAYKNMVLSEIDNAVE
Ga0308412_12143952	3300031513	Hot Spring Phototrophic Mat	MNDKKDMILAALLVIDQLAVQFSVLDEIYPDFRELSEALIFYRDDFMQRAHIAENDFVAYKNMVLSEIGDAVE
Ga0308390_10329952	3300031514	Hot Spring Phototrophic Mat	MSDKKDMILATLLAIDQLAVQFAVLDEIYPDFRELSEALISYRDDFMRRARITENDFEAYKRMVLNEISDAVE
Ga0308396_10864371	3300031515	Hot Spring Phototrophic Mat	FAVLDEIYPDFRELSEALIGYRDDLMRRARIAENDFVAYKNMVLNEIGNAME
Ga0308398_10065162	3300031516	Hot Spring Phototrophic Mat	MNDKSDMILAALLAIDQLAVQFAVLDEIYPDFGELSEALISYRDDLMRRARIAENDFVAYKNMVLNEIGNAME
Ga0308398_10165735	3300031516	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFSGLSEALIGYRDDFMQRAHIAENDFAAYKRMVLNEIGDAVE
Ga0308398_10482421	3300031516	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPYFRELSEALIGYRDDLMRRARIAENDFEAYKRMVLNEIGDAVE
Ga0308398_10866702	3300031516	Hot Spring Phototrophic Mat	LLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRACITENDFEAYKRMVLNEIGYAVERE
Ga0308393_10421091	3300031568	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEAFIGYRDDLIRRARITENDFEAYKRMVLNEIGDAV
Ga0308401_10226383	3300031767	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVD
Ga0308401_10296662	3300031767	Hot Spring Phototrophic Mat	MSDKNDMILAALLAIDQLAVQFAVLDEIYLDFRELSEALISYRDDFMQRAHIAENDFAAYKRMVLNEIGSDAVE
Ga0308415_10124303	3300031776	Hot Spring Phototrophic Mat	MNDKKDMILATLLAIDQLAVQFAVLDEIYPDFRGLSEALISYRDDFMQRARIAENDFAAYKRMVLNEIGSDAVE
Ga0308418_10733822	3300031783	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRDLSEALIGYRDDLIRRARITENDFEAYKSMVLNEIGDAVE
Ga0308418_10829782	3300031783	Hot Spring Phototrophic Mat	DMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308411_100571403	3300031812	Hot Spring Phototrophic Mat	MSDKKDMILAALLALDQLAVQFAVLDEIYPDFDELSKALIGYRDDLMRRARIAENDFVAYKNMVLSEIGDAVE
Ga0308411_100619983	3300031812	Hot Spring Phototrophic Mat	NPQQMNDKKDMILAALLTLDQLAVQFAVLDEIYPDFRALSKAFISYRDDLMRRADVSENDFEAYKRMVLNEIGDAVE
Ga0308411_100880931	3300031812	Hot Spring Phototrophic Mat	MNDKNDMILAALLAIDQLAVQFAVLDEIYPDFRDLSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308411_101063943	3300031812	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFGELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308411_101095492	3300031812	Hot Spring Phototrophic Mat	MNDKNDMILAALLAIDQLAVQFAVLDEIYPDFDELSKALIGYRDDLMRRARIAENDFVAYKNMVLSEIGDAVE
Ga0308411_101353482	3300031812	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALISYRDDLMRRARITENDFEAYKRMVLNEIGDAVE
Ga0308411_101561462	3300031812	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDFMQRACIAENDFAAYKRMVLNEIGDAVE
Ga0308411_101674441	3300031812	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFSVLDEIYPDFRELSEALISYRDDFMQRAHIAEKDFVAYKNMVLSEIGDAVE
Ga0308411_101803382	3300031812	Hot Spring Phototrophic Mat	MSDKNDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308411_101807672	3300031812	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEMYPDFRELSEALIGYRDDFMQRARIAENDFAAYKRMVLNEIGSDAVE
Ga0308411_102203322	3300031812	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPNFRELSEALIGYRDDLMRRARIEERDFVAYKNMVLSEIDNAVE
Ga0308411_102471082	3300031812	Hot Spring Phototrophic Mat	ILAALLAIDQLAVQFAVLDEIYPDFGELSEALIGYRDDFMRRAGVAENNFEAYKRMVLNEIGDAVE
Ga0308411_102522982	3300031812	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFSVLDEIYPDFRELSEALIFYRDDFMQRAHIAENDFVAYKNMVLSEIGDAVE
Ga0308411_102621292	3300031812	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFSVLDEIYPDFRELSEALISYRDDFMRRARVEENDFVAYKNMVLSEIGDAME
Ga0308409_10198813	3300031830	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRDLSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308409_10818121	3300031830	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARIAENDFVAYKNMVLNEIG
Ga0308408_10582171	3300031865	Hot Spring Phototrophic Mat	MILAALLAIDQLAVQFAVLDEIYPDFRGLSEALIGYRDDFMQRAHIAENDFAAYKRMVLNEIGDAVE
Ga0308405_10449903	3300031875	Hot Spring Phototrophic Mat	VGGARLRHQNHPQQMSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308405_11061901	3300031875	Hot Spring Phototrophic Mat	NHQKPMNDKNDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308404_10005416	3300031878	Hot Spring Phototrophic Mat	MNDKKDMILAALLTLDQLAVQFAVLDEIYPDFRALSKALISYRDDLMRRADVSENDFEAYKRMVLNEIGDAVE
Ga0308406_10359492	3300031948	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRGLSEALIGYRDDFMQRAHIAENDFEAYKRMVLNEIGDAVE
Ga0308406_10614921	3300031948	Hot Spring Phototrophic Mat	MSDKNDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARITENDFEAYKRMVLNEIGDAV
Ga0308417_11088622	3300031950	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARIEERDFVAYKNMVLSEIDNAVE
Ga0308417_11168801	3300031950	Hot Spring Phototrophic Mat	MNDKNDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARITENDFEAYKRMVLNEIGDAVE
Ga0308417_11284531	3300031950	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDFMQRACIAENDFAAYKRMVLNEIGNAVE
Ga0308417_11388412	3300031950	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEAFIGYRDDLIRRARIAENDFVAYKNMVLSEIGDAME
Ga0308417_11504392	3300031950	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARVTENDFEAYKRMVLNEIGDAVE
Ga0308417_11659932	3300031950	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARITENDFEAYKRMVLNEIGDAVE
Ga0308417_11750641	3300031950	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKR
Ga0308417_11880912	3300031950	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALVGYRDDLIRRARITENDFEAYKRMVLNEIGDAVE
Ga0308417_11972761	3300031950	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFSVLDEIYPDFRELSEALISYRDDFMQRAHIAENDFVAYKNMVLSEIGDAVE
Ga0308410_10216041	3300031958	Hot Spring Phototrophic Mat	AWLRHQNNPQQMNDKKDMILAALLTLDQLAVQFAVLDEIYPDFRALSKAFISYRDDLMRRADVSENDFEAYKRMVLNEIGDAVE
Ga0308410_11155141	3300031958	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFSVLDEIYPDFRELSEALISYRDDFMQRAHIAENDFVAYKNMVLS
Ga0308410_11651182	3300031958	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYLDFRDLSEALIGYRDDLMRRARITENDFEAYKRMVLNEIGDAVE
Ga0308410_11703271	3300031958	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFWELSEALIGYRDDLIRRARITENDFEAYKRMVLNEIGDAV
Ga0308402_10468381	3300032033	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLIRRARITENDFEAYKRM
Ga0308407_10781122	3300032034	Hot Spring Phototrophic Mat	MNDKNDMILAALLAIDQLAVQFAVLDEIYPDFGELSEALISYRDDLMRRARIAENDFVAYKNMVLNEIGNAME
Ga0308400_10037255	3300032045	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYTDFRELSEALIGYRDDFMQRARIAENDFAAYKRMVLNEIGSDAVE
Ga0308400_10472533	3300032045	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDLMRRARIAENDFVAYKNMVLSEIGDAVE
Ga0308400_10473482	3300032045	Hot Spring Phototrophic Mat	MSDKNDMILAALLAIDQLAVQFAVLDEIYPDFRGLSEALISYRDDFMQRARIAENDFAAYKRMVLNEIGSDAVE
Ga0308400_10758222	3300032045	Hot Spring Phototrophic Mat	MNDKKDMILATLLAIDQLAVQFAVLDEIYPDFRELSEALISYRDDFMQLAHIAENDFVAYKRMVLNEIGSDAVE
Ga0308400_10977252	3300032045	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALIGYRDDFMQRARISENDFAAYKRMVLNEIGDAVE
Ga0308400_10982252	3300032045	Hot Spring Phototrophic Mat	MNDKKDMILATLLAIDQLAVQFAVLDEIYPDFRELSEALISYRDDFMQRAHIAENDFVAYKRMVLNEIGSDAVE
Ga0308419_10767681	3300032058	Hot Spring Phototrophic Mat	HSQQMSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRELSEALISYRDDFMQRAHIAENDFVAYKNMVLSEIGDAVE
Ga0308419_10891792	3300032058	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFRGLSEALIGYRDDFMQRAHIAENDFVAYKNMVLSEIGDAVE
Ga0308414_11206742	3300032356	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEIYPDFDELSKALIGYRDDLMRRARIAENDFVAYKNMVLSEIGDAVE
Ga0308413_141700_247_471	3300033886	Hot Spring Phototrophic Mat	MNDKKDMILAALLAIDQLAVQFAVLDEIYPDFRGLSEALISYRDDFMQRAHIAENDFVAYKRMVLNEIGSDAVE
Ga0308413_158008_260_481	3300033886	Hot Spring Phototrophic Mat	MSDKKDMILAALLAIDQLAVQFAVLDEMYPDFRELSEALIGYRDDFMQRARITENDFEAYKRMVLNEIGDAVE
Ga0372970_010174_1442_1663	3300034648	Hot Spring Phototrophic Mat	MNDKKDMILAVLLTLDQLAVQFAVLDEIYPDFRALSKAFISYRDDLMRRADVSENDFEAYKRMVLNEIGDAVE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104638

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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