NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104616

Metagenome Family F104616

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104616
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 76 residues
Representative Sequence MKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSDKQQAPRYKSSDYAARRAATN
Number of Associated Samples 74
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 30.30 %
% of genes near scaffold ends (potentially truncated) 27.00 %
% of genes from short scaffolds (< 2000 bps) 78.00 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (98.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(27.000 % of family members)
Environment Ontology (ENVO) Unclassified
(75.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(69.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF12705PDDEXK_1 2.00
PF03889ArfA 1.00
PF00476DNA_pol_A 1.00
PF02945Endonuclease_7 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 1.00
COG3036Stalled ribosome alternative rescue factor ArfATranslation, ribosomal structure and biogenesis [J] 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A98.00 %
All OrganismsrootAll Organisms2.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10120860Not Available1030Open in IMG/M
3300000116|DelMOSpr2010_c10153819Not Available784Open in IMG/M
3300005239|Ga0073579_1189688Not Available30619Open in IMG/M
3300006025|Ga0075474_10018071Not Available2591Open in IMG/M
3300006867|Ga0075476_10170485Not Available804Open in IMG/M
3300006874|Ga0075475_10291222Not Available676Open in IMG/M
3300006916|Ga0070750_10207113Not Available866Open in IMG/M
3300006916|Ga0070750_10261317Not Available749Open in IMG/M
3300006920|Ga0070748_1155756Not Available848Open in IMG/M
3300007345|Ga0070752_1116965Not Available1125Open in IMG/M
3300007345|Ga0070752_1266772Not Available661Open in IMG/M
3300007346|Ga0070753_1026548Not Available2514Open in IMG/M
3300007346|Ga0070753_1113541Not Available1048Open in IMG/M
3300007539|Ga0099849_1083400Not Available1290Open in IMG/M
3300007540|Ga0099847_1014954Not Available2548Open in IMG/M
3300007640|Ga0070751_1119409Not Available1076Open in IMG/M
3300007640|Ga0070751_1174313Not Available848Open in IMG/M
3300007725|Ga0102951_1062594Not Available1079Open in IMG/M
3300007778|Ga0102954_1030915Not Available1493Open in IMG/M
3300007778|Ga0102954_1131065Not Available713Open in IMG/M
3300008012|Ga0075480_10402831Not Available674Open in IMG/M
3300009000|Ga0102960_1022756Not Available2348Open in IMG/M
3300009000|Ga0102960_1078630Not Available1207Open in IMG/M
3300009001|Ga0102963_1204574Not Available786Open in IMG/M
3300009027|Ga0102957_1077499Not Available1147Open in IMG/M
3300009027|Ga0102957_1327243Not Available564Open in IMG/M
3300009076|Ga0115550_1144501Not Available836Open in IMG/M
3300009193|Ga0115551_1083090Not Available1519Open in IMG/M
3300009420|Ga0114994_10326060Not Available1021Open in IMG/M
3300009423|Ga0115548_1223193Not Available581Open in IMG/M
3300009434|Ga0115562_1106273Not Available1103Open in IMG/M
3300009434|Ga0115562_1349090Not Available501Open in IMG/M
3300009435|Ga0115546_1057569Not Available1481Open in IMG/M
3300009437|Ga0115556_1166294Not Available807Open in IMG/M
3300009438|Ga0115559_1179827Not Available772Open in IMG/M
3300009440|Ga0115561_1304779Not Available588Open in IMG/M
3300009442|Ga0115563_1023202Not Available3344Open in IMG/M
3300009443|Ga0115557_1367168Not Available534Open in IMG/M
3300009445|Ga0115553_1346771Not Available569Open in IMG/M
3300009445|Ga0115553_1353885Not Available562Open in IMG/M
3300009447|Ga0115560_1062504Not Available1609Open in IMG/M
3300009449|Ga0115558_1031693Not Available2526Open in IMG/M
3300009467|Ga0115565_10025659Not Available3067Open in IMG/M
3300009467|Ga0115565_10186630Not Available959Open in IMG/M
3300009476|Ga0115555_1091100Not Available1318Open in IMG/M
3300009507|Ga0115572_10279435Not Available950Open in IMG/M
3300009786|Ga0114999_10504529Not Available933Open in IMG/M
3300010368|Ga0129324_10023887Not Available2987Open in IMG/M
3300011118|Ga0114922_10951465Not Available698Open in IMG/M
3300020166|Ga0206128_1229513Not Available695Open in IMG/M
3300020166|Ga0206128_1231352All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria691Open in IMG/M
3300020175|Ga0206124_10404432Not Available507Open in IMG/M
3300020185|Ga0206131_10107174Not Available1583Open in IMG/M
3300020187|Ga0206130_10073404Not Available2197Open in IMG/M
3300021958|Ga0222718_10014550Not Available5660Open in IMG/M
3300021958|Ga0222718_10219466Not Available1027Open in IMG/M
3300021960|Ga0222715_10118158Not Available1688Open in IMG/M
3300021964|Ga0222719_10023298Not Available4925Open in IMG/M
(restricted) 3300023112|Ga0233411_10101438Not Available921Open in IMG/M
(restricted) 3300023112|Ga0233411_10113078Not Available873Open in IMG/M
(restricted) 3300023276|Ga0233410_10009365All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium2639Open in IMG/M
(restricted) 3300023276|Ga0233410_10024085Not Available1739Open in IMG/M
(restricted) 3300024052|Ga0255050_10109033Not Available645Open in IMG/M
(restricted) 3300024062|Ga0255039_10307408Not Available677Open in IMG/M
(restricted) 3300024519|Ga0255046_10106527Not Available1199Open in IMG/M
(restricted) 3300024520|Ga0255047_10467986Not Available634Open in IMG/M
3300025048|Ga0207905_1004280Not Available2759Open in IMG/M
3300025138|Ga0209634_1295250Not Available560Open in IMG/M
3300025543|Ga0208303_1002251Not Available7350Open in IMG/M
3300025626|Ga0209716_1020822Not Available2640Open in IMG/M
3300025632|Ga0209194_1064268Not Available1007Open in IMG/M
3300025636|Ga0209136_1042975Not Available1576Open in IMG/M
3300025641|Ga0209833_1092346Not Available893Open in IMG/M
3300025671|Ga0208898_1008640Not Available5281Open in IMG/M
3300025671|Ga0208898_1023556Not Available2653Open in IMG/M
3300025671|Ga0208898_1040566Not Available1786Open in IMG/M
3300025671|Ga0208898_1139162Not Available672Open in IMG/M
3300025671|Ga0208898_1166721Not Available574Open in IMG/M
3300025701|Ga0209771_1012680Not Available3823Open in IMG/M
3300025759|Ga0208899_1053413Not Available1716Open in IMG/M
3300025759|Ga0208899_1126553Not Available909Open in IMG/M
3300025769|Ga0208767_1108440Not Available1093Open in IMG/M
3300025818|Ga0208542_1064764Not Available1107Open in IMG/M
3300025853|Ga0208645_1141773Not Available927Open in IMG/M
3300025853|Ga0208645_1299573Not Available505Open in IMG/M
3300025894|Ga0209335_10134980Not Available1225Open in IMG/M
(restricted) 3300027868|Ga0255053_10358755Not Available705Open in IMG/M
(restricted) 3300027881|Ga0255055_10340228Not Available810Open in IMG/M
3300031519|Ga0307488_10065713Not Available2746Open in IMG/M
3300031519|Ga0307488_10242199Not Available1194Open in IMG/M
3300031519|Ga0307488_10367257Not Available901Open in IMG/M
3300031519|Ga0307488_10729505Not Available557Open in IMG/M
3300031621|Ga0302114_10126225Not Available1148Open in IMG/M
3300032251|Ga0316198_10122932Not Available1531Open in IMG/M
3300032277|Ga0316202_10229412Not Available863Open in IMG/M
3300033742|Ga0314858_003327Not Available2726Open in IMG/M
3300033742|Ga0314858_036420Not Available1156Open in IMG/M
3300033742|Ga0314858_071599Not Available862Open in IMG/M
3300033742|Ga0314858_091444Not Available768Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous27.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine22.00%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater8.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater5.00%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water5.00%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine4.00%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine4.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.00%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water3.00%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface2.00%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.00%
SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Sediment1.00%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat1.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007725Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MGEnvironmentalOpen in IMG/M
3300007778Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009434Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009442Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300023112 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MGEnvironmentalOpen in IMG/M
3300023276 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MGEnvironmentalOpen in IMG/M
3300024052 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5EnvironmentalOpen in IMG/M
3300024062 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1EnvironmentalOpen in IMG/M
3300024519 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025048Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025701Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025894Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)EnvironmentalOpen in IMG/M
3300027868 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_22EnvironmentalOpen in IMG/M
3300027881 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300032251Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxicEnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1012086033300000101MarineMKNKKKYELIDYFLFDERLSPAALKIHETWCRNNGYKPQATSGKLQATSDKLAPRYNSSDFEPRRGEKK*
DelMOSpr2010_1015381923300000116MarineMKNRKKYELIDYFLFDERLSPAALKIHEAWCRNNGYKPQASSSKRQASFNKKPQAPRYKSSDYAARRAASK*
Ga0073579_118968833300005239MarineMKNKKKYELIDYFLFDERLSPAALKIHESWCRDNGYKPQAASFKRQAPSGKLDLKKKIKLKMKAASCQLAPRYNSSDFEPRRGEKK*
Ga0075474_1001807163300006025AqueousMENTKMKNRKKYELIDYFIFDERLSPAALKIHEAWCRDNGYKPQATSNKRQASSDKQQAPRYKSSDYAARRAATNCRATK*
Ga0075476_1017048523300006867AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYQPQASNDKQQASSDKQQAPRYKSSDYAARRAATNCRATK*
Ga0075475_1029122223300006874AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSGKLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0070750_1020711333300006916AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKRQASSNKQQAPRYKSSDYAAR
Ga0070750_1026131713300006916AqueousKYKLWKTLMKNKKKYELIDYFLFDKRLSPAALKIHEAWCRDNGYKPQATSNKLQATSGKLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0070748_115575623300006920AqueousMKNKKKYELIDYFLFDERLSPAALKIHETWCRNNGYKPQASSSKRQASFNKKPQAPRYKGSDYAARRAASK*
Ga0070752_111696513300007345AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKRQASSDKQQAPRYKNSDYAARRAATN
Ga0070752_126677213300007345AqueousLMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKSQASSHKPQASSHKPQAPRYKSSDYAARRAASK*
Ga0070753_102654823300007346AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKRQASSDKQQAPRYKNSDYAARRAATNCRATK*
Ga0070753_111354123300007346AqueousRKTLMKNKKKYELIDYFLFDEKLSPAALKIHEAWCRDNGYKPQATSDKQQATSFKLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0099849_108340023300007539AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKLQANFNKKPQAPRYKGSDYAARRAASK*
Ga0099847_101495423300007540AqueousMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKSQASSHKPQASSHKPQAPRYKGSDYAARRAASK*
Ga0070751_111940913300007640AqueousYELIDYFLFDERLSPAALKIHEAWCRDNGYQPQATSNKLQATSGKLAPRYNSSDFEPRRGEKKTAAICRRTI*
Ga0070751_117431313300007640AqueousYVAFFKERKTLMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKSQASSHKPQASSHKPQAPRYKSSDYAARRAASK*
Ga0102951_106259423300007725WaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSDKQQASSDKQQAPRYKSSDYAARRAATNCRATK*
Ga0102954_103091523300007778WaterMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSDKQQAPRYKGSDYAARRAATNCRATK*
Ga0102954_113106523300007778WaterMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKLQATSNKLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0075480_1040283123300008012AqueousMKNKKKYELIDYFLFDEKLSPAALKIHEAWCRDNGYKPQATSDKQQATSFKLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0102960_102275653300009000Pond WaterMKNRKKYELIDYFLFDERLSPAALKIHEAWCRNNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKK
Ga0102960_107863033300009000Pond WaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI*
Ga0102963_120457413300009001Pond WaterMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI*
Ga0102957_107749923300009027Pond WaterMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI*
Ga0102957_132724323300009027Pond WaterMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQAASFKQQASSGKLAPRYNSSDFEPRRGEKK*
Ga0115550_114450123300009076Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKQQASSDKPQAPIYKGSDYAARRAASK*
Ga0114918_1028563223300009149Deep SubsurfaceYFLFDERLSPAALKIHEAWCRDNGYKPQAASFKQQASSSKLDLKKKIKLKMKAASSQLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0115551_108309023300009193Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI*
Ga0114994_1032606023300009420MarineMKNRKKYELIDYFLFDERLSPAALKIHESWCQDNGYKQQATSDKLQATSVKLAPRYNSSDFEPRRGEKK*
Ga0115548_122319313300009423Pelagic MarineMKNKKKYELIDYFLFDERLSTAALKIQEAWCRDNGYKPQASSHKLQATSNKLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0115562_110627323300009434Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATINKLAPRYNSSDFEPRRGEKKIAANCRRTI*
Ga0115562_134909013300009434Pelagic MarineMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKLQASFNKKPQAPRYKGSDYAAR
Ga0115546_105756923300009435Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKQQATSVKQQAPRYKSSDYAARRAATNCRATK*
Ga0115556_116629423300009437Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKQQATRVKQQAPRYKSSDYAARRAATNCRATK*
Ga0115559_117982733300009438Pelagic MarineKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSDKQQASSDKQQAPRYKSSDYAARRAATNCRATK*
Ga0115561_130477923300009440Pelagic MarineMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKHQAASFKQQASSSKLDFKKKIKPKMKAASSQLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0115563_102320263300009442Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI*
Ga0115557_136716823300009443Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLQATSNKLASRYNSSDFEPRRGEKKTAANCRRTI*
Ga0115553_134677123300009445Pelagic MarineMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQASSDKQQAPRYNSSDFEPRRGEKKIAAN
Ga0115553_135388523300009445Pelagic MarineMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI*
Ga0115560_106250423300009447Pelagic MarineMENTKMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0115558_103169323300009449Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYQLQATSDKQQASSDKQQAPRYKSSDYAARRAATNCRATK*
Ga0115565_1002565973300009467Pelagic MarineMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKLQASFNKKPQAPRYKSSDYAARRAASK*
Ga0115565_1018663033300009467Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKTAANCRRTI*
Ga0115555_109110013300009476Pelagic MarineLIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKQQASSDKQQAPRYKSSDYAARRAATNCRATK*
Ga0115572_1027943533300009507Pelagic MarineMKNKKKYELIDYFLFDERLSPAALKVHEAWCRDNGYEPQATSNKQQASSDKQQAPRYKSSDYAARRAATNCRATK*
Ga0114999_1050452913300009786MarineMENTKMKNKKKYELIDYFLFDERLSPAALKIHETWCRNNGYKPQASSSKRQASFNKKPQAPRYKGSDYAARRAASK
Ga0129324_1002388753300010368Freshwater To Marine Saline GradientMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSHKPQASSHKPQAPRYKGSDYAARRAASK*
Ga0114922_1095146523300011118Deep SubsurfaceMKNRKKYELIDYFLFDERLSPAALKIHESWCQDNGYKPQAPRYNSSDFEPRRGEKK*
Ga0206128_122951313300020166SeawaterMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKLQASFNKKPQAPRYKGSDYAARRAASK
Ga0206128_123135223300020166SeawaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKQQASSDKQQAPRYKSSDYAARRAATNCRATK
Ga0206124_1040443213300020175SeawaterMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKQQASSDKQQAPRYKSSDYAARRAATNCRATKXRRGDKPQATSDKRQAT
Ga0206131_1010717433300020185SeawaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKQQASSDKQQAPRYKSSDYAARRAATNCRATK
Ga0206130_1007340413300020187SeawaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSDKQQASSDKQQAPRYKSSDYAARRAATI
Ga0222718_1001455033300021958Estuarine WaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSDKQQASSDKQQAPRYKSSDYAARRAATNCRATK
Ga0222718_1021946623300021958Estuarine WaterMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI
Ga0222715_1011815823300021960Estuarine WaterMKNKKKYELIDYFLFDERLSPAALKIHEAWCQDNGYKPQATSNKLQATSNKLTPRYNSSDFEPRRGEKKIAANCRRTI
Ga0222719_1002329893300021964Estuarine WaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKQQASSDKQQAPRYKSSDYAARRAATNCRATK
(restricted) Ga0233411_1010143823300023112SeawaterMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSHKLKASFKKKPQAPRYKGSDYAARRAASK
(restricted) Ga0233411_1011307823300023112SeawaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKQQASSDKQQAPRYKSSD
(restricted) Ga0233410_1000936523300023276SeawaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKQQASSDKQQAPRYKGSDYAARRGEKKTAANCRRTI
(restricted) Ga0233410_1002408523300023276SeawaterMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSHKLKANFNKKPQAPRYKGSDYAARRAASK
(restricted) Ga0255050_1010903313300024052SeawaterMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDKGYKPQAASLKRQASSGKLDLKKKIKLKIKAASCQLAPRYNSSDFEPRRGEKKIAANCRRTI
(restricted) Ga0255039_1030740823300024062SeawaterMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSHKLKAGFNKKPQAPRYKGSDYAARRAASK
(restricted) Ga0255046_1010652723300024519SeawaterMESTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSHKLKANFNKKPQAPRYKGSDYAARRAASK
(restricted) Ga0255047_1046798613300024520SeawaterGFNMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSDKLQATSDKLAPRYNSSDFEPRRGEKKTAANCRRTI
Ga0207905_100428053300025048MarineMKNKKKYELIDYFLFDERLSPAALKIHETWCRDNGYKPQANFKKKPQASFNKKLQASRYKGSDYAARRAASK
Ga0209634_129525023300025138MarineMKNKKKYELIDYFLFDERLSPAALKIHETWCRDNGYKPQANFKKKPQASFNKKLQASRYK
Ga0208303_100225173300025543AqueousMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSHKPQASSHKPQAPRYKGSDYAARRAASK
Ga0209716_102082233300025626Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKTAANCRRTI
Ga0209194_106426813300025632Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSVKQQATSVKQQAPRYKSSDYAARRAATNCRATK
Ga0209136_104297523300025636MarineMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSDKQQAPRYKSSDYAARRAATN
Ga0209833_109234633300025641Pelagic MarineDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI
Ga0208898_100864093300025671AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKRQASSDKQQAPRYKNSDYAARRAATNCRATK
Ga0208898_102355643300025671AqueousMENTKMKNRKKYELIDYFIFDERLSPAALKIHEAWCRDNGYKPQATSNKRQASSDKQQAPRYKSSDYAARRAATNCRATK
Ga0208898_104056613300025671AqueousLKERKTLMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKSQASSHKPQASSHKPQAPRYKSSDYAARRAASK
Ga0208898_113916223300025671AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYQPQATSNKLQATSGKLAPRYNSSDFEPRRGEKKTAANCRRTI
Ga0208898_116672123300025671AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYQPQASNDKQQASSDKQQAPRYKSSDYAARRAATNCRATK
Ga0209771_101268013300025701MarineMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSDKQQAPRYKSSDYAARRAAT
Ga0208899_105341333300025759AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI
Ga0208899_112655313300025759AqueousMENTKMKNRKKYELIDYFIFDERLSPAALKIHEAWCRDNGYKPQATSNKRQASSDKQQAPRYKSS
Ga0208767_110844033300025769AqueousELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKTAANCRRTI
Ga0208542_106476423300025818AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSGKLAPRYNSSDFEPRRGEKKTAANCRRTI
Ga0208645_114177323300025853AqueousMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKSQASSHKPQASSHKPQAPRYKSSDYAARRAASK
Ga0208645_129957313300025853AqueousYELIDYFLFDERLSPAALKIHEAWCRDNGYQPQATSNKLQATSGKLAPRYNSSDFEPRRGEKKTAAICRRTI
Ga0209335_1013498033300025894Pelagic MarineMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKTAAICRRTI
(restricted) Ga0255053_1035875523300027868SeawaterMENTKMKNKKKYELIDYFLFDERLSPAALKIHDAWCQDNGYKLQAASLKQQASSGKLAPRYNSSDFEPRRGEKK
(restricted) Ga0255055_1034022813300027881SeawaterMENTKMKNKKKYELIDYFLFDERLSPAALKIHESWCQDNGYKLQAASLKQQASSGKLDLKKKIKLKIKAASCQLAPRYNSSDFEPRRGEKK
Ga0307488_1006571363300031519Sackhole BrineMESTKMKNKKKYELIDYFLFDERLSPAALKIHESWCQDNGYKLQAASFKQQASSGKLDLKKKIKLKIKAASCQLAPRYNSS
Ga0307488_1024219933300031519Sackhole BrineMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKLQATSVKLAPRYNSSDFEPRRGEKK
Ga0307488_1036725723300031519Sackhole BrineMKNRKKYELIDYFLFDERLSPAALKIHESWCQDNGYKLQAASLKQQASSGKLQAPRYKSSDYAARRAATK
Ga0307488_1072950523300031519Sackhole BrineMKKRKKYELIDYFLFDERLSPAALKIHEAWCQDNGYKPQASSDKPQATSFKPQAPRYKSSDYAARRAATK
Ga0302114_1012622533300031621MarineMKNKKKYELVDYFLFDERLSPAALKIHDAWCRENGYKQQATSDKLQATSVKLAPRYNSSDFEPRRGEKK
Ga0316198_1012293223300032251SedimentMENTKMKNRKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQATSNKLQATSNKLAPRYNSSDFEPRRGEKKIAANCRRTI
Ga0316202_1022941233300032277Microbial MatMKNRKKYELIDYFLFDERLSPAALKIHETWCRNNGYKPQANFKKKPQASFNKKPQAPRYKGSDYAARRAASK
Ga0314858_003327_1254_14693300033742Sea-Ice BrineMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSSKPQANFNKKLQAPRYKSSDYAARRAASK
Ga0314858_036420_69_2963300033742Sea-Ice BrineMESTKMKNKKKYELIDYFLFDERLSPAALKIHEAWCRDNGYKPQASSDKPQATSVKLQAPRYKSSDYAARRAATK
Ga0314858_071599_529_7383300033742Sea-Ice BrineMKNKKKYELIDYFLFDERLSPAALKIHETWCRNNGYKPQATSDKLQATSVKLAPRYNSSDFEPRRGEKK
Ga0314858_091444_475_7023300033742Sea-Ice BrineMENTKMKNKKKYELIDYFLFDERLSPAALKIHESWCQDNGYRPQASSSKPQASSGKPQASRYKSSDYAARRAATK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.