NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F104559

Metagenome / Metatranscriptome Family F104559

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104559
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 64 residues
Representative Sequence MEDASDKGKITSWRQALDQGTLTSEQIAVLDEMVKEGQAENREAAASMLDWQDAIINKPEHMYGF
Number of Associated Samples 77
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.00 %
% of genes near scaffold ends (potentially truncated) 29.00 %
% of genes from short scaffolds (< 2000 bps) 90.00 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (88.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(9.000 % of family members)
Environment Ontology (ENVO) Unclassified
(42.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.63%    β-sheet: 0.00%    Coil/Unstructured: 62.37%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF07670Gate 32.00
PF14579HHH_6 13.00
PF01336tRNA_anti-codon 9.00
PF11340DUF3142 4.00
PF14534DUF4440 4.00
PF08447PAS_3 2.00
PF12804NTP_transf_3 1.00
PF13676TIR_2 1.00
PF13620CarboxypepD_reg 1.00
PF01432Peptidase_M3 1.00
PF00009GTP_EFTU 1.00
PF10090HPTransfase 1.00
PF16347DUF4976 1.00
PF11937DUF3455 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0339Zn-dependent oligopeptidase, M3 familyPosttranslational modification, protein turnover, chaperones [O] 1.00
COG1164Oligoendopeptidase FAmino acid transport and metabolism [E] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.00 %
UnclassifiedrootN/A12.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c1647758All Organisms → cellular organisms → Bacteria → Acidobacteria767Open in IMG/M
3300000891|JGI10214J12806_10832160All Organisms → cellular organisms → Bacteria3265Open in IMG/M
3300004009|Ga0055437_10255785All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300004114|Ga0062593_100235979All Organisms → cellular organisms → Bacteria → Acidobacteria1496Open in IMG/M
3300004156|Ga0062589_102531848All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300004463|Ga0063356_100990485All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1199Open in IMG/M
3300004463|Ga0063356_101587914All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300004463|Ga0063356_101842272All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae910Open in IMG/M
3300004463|Ga0063356_105705215Not Available534Open in IMG/M
3300004463|Ga0063356_106065474All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300004480|Ga0062592_100574361All Organisms → cellular organisms → Bacteria → Acidobacteria951Open in IMG/M
3300005093|Ga0062594_102744144All Organisms → cellular organisms → Bacteria → Acidobacteria546Open in IMG/M
3300005295|Ga0065707_10960162All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005332|Ga0066388_102264590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → unclassified Bauldia → Bauldia sp.982Open in IMG/M
3300005334|Ga0068869_101176267All Organisms → cellular organisms → Bacteria → Acidobacteria673Open in IMG/M
3300005347|Ga0070668_100920511All Organisms → cellular organisms → Bacteria → PVC group782Open in IMG/M
3300005347|Ga0070668_101379506Not Available642Open in IMG/M
3300005364|Ga0070673_100977840All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300005438|Ga0070701_10988663Not Available586Open in IMG/M
3300005445|Ga0070708_101601540All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300005543|Ga0070672_100201295All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300005564|Ga0070664_101893290All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300005577|Ga0068857_101222004All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300005617|Ga0068859_101751373All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300005719|Ga0068861_101119096All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium758Open in IMG/M
3300005719|Ga0068861_101743765All Organisms → cellular organisms → Bacteria → Acidobacteria617Open in IMG/M
3300005764|Ga0066903_100791324Not Available1694Open in IMG/M
3300005764|Ga0066903_101379154All Organisms → cellular organisms → Bacteria → Proteobacteria1323Open in IMG/M
3300005830|Ga0074473_10429744Not Available621Open in IMG/M
3300005836|Ga0074470_10060528All Organisms → cellular organisms → Bacteria3105Open in IMG/M
3300005840|Ga0068870_10223871All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300005840|Ga0068870_10261517All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300005843|Ga0068860_100877885All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300007004|Ga0079218_10509459Not Available1067Open in IMG/M
3300007004|Ga0079218_10610117All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium999Open in IMG/M
3300009094|Ga0111539_10332127All Organisms → cellular organisms → Bacteria1769Open in IMG/M
3300009094|Ga0111539_12004031All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300009100|Ga0075418_11052698All Organisms → cellular organisms → Bacteria → Acidobacteria881Open in IMG/M
3300009101|Ga0105247_10869260All Organisms → cellular organisms → Bacteria → Proteobacteria694Open in IMG/M
3300009156|Ga0111538_10375674Not Available1800Open in IMG/M
3300009176|Ga0105242_10165517All Organisms → cellular organisms → Bacteria → Acidobacteria1939Open in IMG/M
3300009553|Ga0105249_10503983All Organisms → cellular organisms → Bacteria → Acidobacteria1256Open in IMG/M
3300009553|Ga0105249_11101761All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Saezia → Saezia sanguinis864Open in IMG/M
3300010047|Ga0126382_10930084All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → unclassified Bauldia → Bauldia sp.755Open in IMG/M
3300010166|Ga0126306_11349394All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300010399|Ga0134127_12629172All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300010399|Ga0134127_12782544All Organisms → cellular organisms → Bacteria → Acidobacteria569Open in IMG/M
3300010401|Ga0134121_10000301All Organisms → cellular organisms → Bacteria58224Open in IMG/M
3300011445|Ga0137427_10310182Not Available664Open in IMG/M
3300012892|Ga0157294_10011034All Organisms → cellular organisms → Bacteria → Acidobacteria1577Open in IMG/M
3300012911|Ga0157301_10197514All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300012971|Ga0126369_10840041All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300013308|Ga0157375_11610698All Organisms → cellular organisms → Bacteria → Acidobacteria768Open in IMG/M
3300014326|Ga0157380_11092174All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300014745|Ga0157377_11741330All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300015371|Ga0132258_10030611All Organisms → cellular organisms → Bacteria12023Open in IMG/M
3300015371|Ga0132258_10329714All Organisms → cellular organisms → Bacteria3767Open in IMG/M
3300015371|Ga0132258_11170221Not Available1944Open in IMG/M
3300015371|Ga0132258_11264337All Organisms → cellular organisms → Bacteria1865Open in IMG/M
3300015371|Ga0132258_12427034All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300015374|Ga0132255_103238537All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300018469|Ga0190270_10826764All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium936Open in IMG/M
3300018476|Ga0190274_10031690All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3619Open in IMG/M
3300018481|Ga0190271_10791054All Organisms → cellular organisms → Bacteria → Acidobacteria1073Open in IMG/M
3300018481|Ga0190271_12248738Not Available651Open in IMG/M
3300019361|Ga0173482_10739688All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300022915|Ga0247790_10172661All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300025324|Ga0209640_11072732All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300025903|Ga0207680_10050935All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium2474Open in IMG/M
3300025908|Ga0207643_10251381All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300025908|Ga0207643_10584365All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300025918|Ga0207662_10241141All Organisms → cellular organisms → Bacteria → Acidobacteria1184Open in IMG/M
3300025923|Ga0207681_10080542All Organisms → cellular organisms → Bacteria2297Open in IMG/M
3300025923|Ga0207681_10288093All Organisms → cellular organisms → Bacteria → Acidobacteria1295Open in IMG/M
3300025923|Ga0207681_11821073Not Available508Open in IMG/M
3300025926|Ga0207659_10006582All Organisms → cellular organisms → Bacteria7132Open in IMG/M
3300025926|Ga0207659_10194006All Organisms → cellular organisms → Bacteria → Acidobacteria1618Open in IMG/M
3300025931|Ga0207644_11136956All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300025934|Ga0207686_10675790All Organisms → cellular organisms → Bacteria → Acidobacteria819Open in IMG/M
3300025936|Ga0207670_10565478All Organisms → cellular organisms → Bacteria → Acidobacteria931Open in IMG/M
3300025940|Ga0207691_10225914All Organisms → cellular organisms → Bacteria1622Open in IMG/M
3300025942|Ga0207689_10809290All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300025942|Ga0207689_11792809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria507Open in IMG/M
3300026095|Ga0207676_11546237All Organisms → cellular organisms → Bacteria → Acidobacteria661Open in IMG/M
3300026116|Ga0207674_11149134All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300027886|Ga0209486_10021036All Organisms → cellular organisms → Bacteria3049Open in IMG/M
3300027886|Ga0209486_10118948All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1423Open in IMG/M
3300028381|Ga0268264_11152277All Organisms → cellular organisms → Bacteria → Acidobacteria784Open in IMG/M
3300031538|Ga0310888_10883950All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes557Open in IMG/M
3300031854|Ga0310904_10143079All Organisms → cellular organisms → Bacteria → Acidobacteria1380Open in IMG/M
3300031858|Ga0310892_10508582All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300031908|Ga0310900_10400214All Organisms → cellular organisms → Bacteria → Acidobacteria1042Open in IMG/M
3300032013|Ga0310906_11435988Not Available507Open in IMG/M
3300032075|Ga0310890_11396039All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300032157|Ga0315912_10649507All Organisms → cellular organisms → Bacteria → Acidobacteria840Open in IMG/M
3300032179|Ga0310889_10425966All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300032211|Ga0310896_10111953All Organisms → cellular organisms → Bacteria → Acidobacteria1240Open in IMG/M
3300032421|Ga0310812_10544763All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300034147|Ga0364925_0139916All Organisms → cellular organisms → Bacteria → Acidobacteria875Open in IMG/M
3300034668|Ga0314793_112457All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2580Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere8.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere7.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere6.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.00%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.00%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)2.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.00%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005830Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBMEnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300022915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_164775813300000033SoilSWRQALDQGLLTAQQLAVLDEMVTDGQAEDRQAAASMLDWQDAIINKPEHMYGF*
JGI10214J12806_1083216023300000891SoilMEDTTGRIQSWRLALEQGILTVEQRAVLEDMVTQGEAENIEAAASMLDWQDALINKPEHMYGF*
Ga0055437_1025578523300004009Natural And Restored WetlandsMENTPKQDQFKSWRQALEQGLLTPEQKASLEDMVAQGSAENLESAASMLDWQDAIINKPEHMYGF*
Ga0062593_10023597923300004114SoilMDDTQDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF*
Ga0062589_10253184823300004156SoilMSSRMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESREAAASMLDWQDAIINKPEHMYGF*
Ga0063356_10099048523300004463Arabidopsis Thaliana RhizosphereMENTSDKGKITSWRNALDQGMLTSEQIAVLDEMVKDGQAETREAAANMLDWQDAIINKPEHMYGF
Ga0063356_10158791413300004463Arabidopsis Thaliana RhizosphereMDEAPEQGRITSWRQALDQGTLTSEQIAVLEDMVKDGEAENLQAAASMLDWQDAIINKPEHMYGF*
Ga0063356_10184227223300004463Arabidopsis Thaliana RhizosphereMADTSDTGKITSWRQALDQGSLTAQQLAVLDEMVKDGQADDRQAAASMLDWQDAIINKPEHMYGF*
Ga0063356_10570521513300004463Arabidopsis Thaliana RhizosphereMSWRDRMDFIMSDSPENPRITSWRQALDQGMLSREQIAVLEEMVKEGQAENLQSAASMLDWQDAIINKPEHMYGF*
Ga0063356_10606547423300004463Arabidopsis Thaliana RhizosphereMENKITSWRQALESGSLSAEQLAVLDEMVEQGQAADRQAAASMLDWQDAIINKPEHMYGF
Ga0062592_10057436113300004480SoilHASSATFKGFPLKRTSRDRMSSRMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESRAAAASMLDWQDAIINKPEHMYGF*
Ga0062594_10274414413300005093SoilMNDANKGRFTSWRQALDSGTLTSEQIAVLEEMVKDGQAESIQGAASMLDWQDAIINKPEHMYGF*
Ga0065707_1096016223300005295Switchgrass RhizosphereMNDAEDTGKFTSWRQALDNGTLTSKQIAVLEEMVKEGQAESIEAAASMLDWQDAIINKPEHMYGF*
Ga0066388_10226459013300005332Tropical Forest SoilMSNQEQSAIKSWRVALDQGILSKEQLAVLEEMVQKGEAQDLAGAASMLDWQDAIINKPEHMYGF*
Ga0068869_10117626723300005334Miscanthus RhizosphereMSSRMENTPDKGKFTSWRLALDQDALTSEQLAVLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF*
Ga0070668_10092051123300005347Switchgrass RhizosphereMENTPGKITSWRQALDQGLLTAQQLAVLDEMVTDGQADDRQAAASMLDWQDAIINKPEHMYGF*
Ga0070668_10137950613300005347Switchgrass RhizosphereMDNPQDQGKITSWRQALDNGVLTSQQIAVLEEMVKEGQAESIEAAASMLDWQDAIINKPEHMYGF*
Ga0070673_10097784013300005364Switchgrass RhizosphereMNDANKGRFTSWRQALDSGTLTSEQIAVLEEMVKDGQAESIQGAASMLDWQDAIINKPEH
Ga0070701_1098866313300005438Corn, Switchgrass And Miscanthus RhizosphereMDDTQDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIIN
Ga0070708_10160154013300005445Corn, Switchgrass And Miscanthus RhizosphereDEIPHMDDTQDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF*
Ga0070672_10020129513300005543Miscanthus RhizosphereMNDANKGRFTSWRQALDSGTLTSEQIAVLEEMVKDGQAESIQGAASMLDWQDA
Ga0070664_10189329023300005564Corn RhizosphereMDDTQDKGKINSWRQALDNGALSAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF*
Ga0068857_10122200423300005577Corn RhizosphereMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESRAAAASMLDWQDAIINKPEHMYGF*
Ga0068859_10175137323300005617Switchgrass RhizosphereMSSRMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF*
Ga0068861_10111909623300005719Switchgrass RhizosphereMDDTQDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAENLQAAASMLDWQDAI
Ga0068861_10174376513300005719Switchgrass RhizosphereHMDDTQDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF*
Ga0066903_10079132413300005764Tropical Forest SoilMEDARDKGKITSWRQALDQGNLSSEQIAVLDEMVKEGQAENREAAASMLDWQDAIIN
Ga0066903_10137915423300005764Tropical Forest SoilMDDAQDKGKFTSWRQALENGTLTNQQIAVLEEMVKEGQAETIEAAASMLDWQDAIINKPEHMYGF*
Ga0074473_1042974423300005830Sediment (Intertidal)MNDEGKKTISSWRQALDSGALTVEQKAVLEDMVNQGQAETLEAAASMLDWQDAIINKPEHMYGF*
Ga0074470_1006052823300005836Sediment (Intertidal)MSDDKPKAIASWRLALEAGQLTAEQRGVLEEMVSKGEAASVEAAASMLDWQDAIINKPEHMYGF*
Ga0068870_1022387123300005840Miscanthus RhizosphereMNDAQDKGKFTSWRQALDNGTLTSAQVNVLEEMVKEGQAENIQAAASMLDWQDAIINKPEHMYGF*
Ga0068870_1026151723300005840Miscanthus RhizosphereMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESREAAASMLDWQDAIINKPEHMYGF*
Ga0068860_10087788523300005843Switchgrass RhizosphereMEETKFKSWRQALDAELLTPEQLAVLDDMVKQGQAEDRQAAASMLDWQDAIINKPEHMYGF*
Ga0079218_1050945923300007004Agricultural SoilRDTIGSSMDTSPEQGKITSWRQALDQGTLTPEQTAVLEDMVKEGQAENLQAAASMLDWQDAIINKAEHMYGF*
Ga0079218_1061011713300007004Agricultural SoilMENSPEPGKITSWRQALDQGKLTSDQIAVLEGMVQEGQAENLQAAASMLDWQDAIINKPEHMYGF*
Ga0111539_1033212723300009094Populus RhizosphereMDDTPEEGKITSWRQALEQGTLTTGQIAVLDEMVKEGQAESRESAASMLDWQDAIINKPEHMYGF*
Ga0111539_1200403113300009094Populus RhizosphereKRTSRDRMSSRMENTPDKGKFTSWRLALDQDALTSEQLAVLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF*
Ga0075418_1105269813300009100Populus RhizosphereMQENKFTSWRQALDNGLLTPEQLAVLDEMVQEGHAADRQAAASMLDWQDGIINKPEHMYGF*
Ga0105247_1086926023300009101Switchgrass RhizosphereMDDTQDKGKISSGRQALDNGALTAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMY
Ga0111538_1037567423300009156Populus RhizosphereFTSWRLALDQDALTKEQLAVLDEMVSEGQAESREAAASMLDWQDAIINKPEHMYGF*
Ga0105242_1016551733300009176Miscanthus RhizosphereMESTDERPIQSWHQALVQGILTKEQLAVLEEMVKQGEAENIDAAASMLDWQDAIINKPEHMYGF*
Ga0105249_1050398323300009553Switchgrass RhizosphereMENTPDKGKFTSWRLALDQDALTSEQLAVLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF*
Ga0105249_1110176123300009553Switchgrass RhizosphereMDDTQDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAESIEAAASMRDWQDAIINKL*
Ga0126382_1093008423300010047Tropical Forest SoilMEDTSDKGKFKSWRQALEQGLLMPDQIAVLEDMVKQGQAEDLQAAASMLDWQDAIINKPEHMYGF*
Ga0126306_1134939413300010166Serpentine SoilMDALMRETPEKGKFTCWRQALDNGILSSEQIALLDDMVMEGQADTREAAASMLDWQDAIINKPEHMYGF*
Ga0134127_1262917213300010399Terrestrial SoilMESNDERPIQSWHQALEQGILTKEQLAVLEEMVKQGEAETIDAAASMLDWQDAIINKPEHMYGF*
Ga0134127_1278254423300010399Terrestrial SoilMEDTPDKGKITSWRLALEQNILTTEQIAVLDEMVAEGQAETREAAANMLDWQDAIINKPEHMYGF*
Ga0134121_10000301483300010401Terrestrial SoilMENADQPTIKSWHQALEQGILTKEQLAVLEDMVKQGKAATIDAAASMLDWQDAIINKPEHMYGF*
Ga0137427_1031018223300011445SoilMENSPEPGKITCWRQALDQGKLTSDQIAVLEGMVQEGQAENLQAAASMLDWQDAII
Ga0157294_1001103423300012892SoilMDDMQDKGKINSWRQALDNGALSAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF*
Ga0157301_1019751423300012911SoilMENTPDKGKFTSWRLALDQDALTNEQLAVLDEMVSEGQAESREAAASMLDWQDAIINKPEHMYGF*
Ga0126369_1084004123300012971Tropical Forest SoilMENQTDQGKFKSWRQALDHEQLTPEQLAVLDDMVTQGQAENRQAAASMLDWQDAIINKPEHMYGF*
Ga0157375_1161069813300013308Miscanthus RhizosphereGNCHHASSATFKGFPLKRTSRDRMSSRMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESREAAASMLDWQDAIINKPEHMYGF*
Ga0157380_1109217413300014326Switchgrass RhizosphereMESTDQPTIKSWHQALEQGILTKEQLAVLEDMVKQGEAATIDAAASMLDWQDAIINKPEHMYGF*
Ga0157377_1174133023300014745Miscanthus RhizosphereMENTPGKITSWRQALDQGLLTAQQLAVLDEMVTDGQAEDRQAAASMLDWQDAIINKPEHMYGF*
Ga0132258_10030611133300015371Arabidopsis RhizosphereMDNAEDNGRITSWRQALDQGALASEQLAVLDEMVKEGQAETREAAASMLDWQDAIINKPEHMYGF*
Ga0132258_1032971423300015371Arabidopsis RhizosphereMEETKFKSWCQALDAGLLTPEQLAVLDDMVKQGQAEDRQAAASMLDWQDAIINKPEHMYGF*
Ga0132258_1117022113300015371Arabidopsis RhizosphereMDDTQDKGKFTSWRQALDNGTLTSKQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF*
Ga0132258_1126433723300015371Arabidopsis RhizosphereMEDASDKGKITSWRQALDQGTLTSEQIAVLDEMVKEGQAENREAAASMLDWQDAIINKPEHMYGF*
Ga0132258_1242703423300015371Arabidopsis RhizosphereMESTNEGKIRSWHQALVEGTLTKEQLATLEDMVQQRQAESIDAAASMLDWQDAIINKPEHMYGF*
Ga0132255_10323853713300015374Arabidopsis RhizosphereDKGRFTSWRQALDNGTLTSEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF
Ga0190270_1082676423300018469SoilMENSPEPGKITCWRQALDQGKLTSDQIAVLEGMVQEGQAENLQAAASMLDWQDAIINKPEHMYGF
Ga0190274_1003169043300018476SoilMDTPDERPIQSWHQALEQGILTKEQLAVLEEMVKQGEAETIDAAASMLDWQDAIINKPEHMYGF
Ga0190271_1079105423300018481SoilMDSSPEKGKITSWRQALEQGELTSEQVAVLEEMVKEGQAENLHAAASMLDWQDAIINKPEHMYGF
Ga0190271_1224873813300018481SoilMNDAQDQGKITSWRQALDNGMLTTQQIAVLEEMVKEGQAESIEAAASMLDWQDAIINKPEHMYGF
Ga0173482_1073968813300019361SoilMEDTSDKGKITSWRQGLDQGMLTSEQIAVLDEMVMEGQAENREAAASMLDWQDAIINKPEHMYGF
Ga0247790_1017266123300022915SoilMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESREAAASMLDWQDAIINKPEHMYGF
Ga0209640_1107273223300025324SoilMEDTSDKGQFRSWRQALDQGTLTSKQVAVLDEMVKEGQAENREAAASMLDWQDAIINKP
Ga0207680_1005093523300025903Switchgrass RhizosphereMDDTQDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF
Ga0207643_1025138123300025908Miscanthus RhizosphereMENTPDKGKFTSWRLALDQDALTNEQLAVLDEMVSEGQAESREAAASMLDWQDAIINKPEHMYGF
Ga0207643_1058436523300025908Miscanthus RhizosphereMNDAQDKGKFTSWRQALDNGTLTSAQVNVLEEMVKEGQAENIQAAASMLDWQDAIINKPEHMYGF
Ga0207662_1024114123300025918Switchgrass RhizosphereMDNPQDQGKITSWRQALDSGTLTSEQIAVLEEMVKDGQAESIQGAASMLDWQDAIINKPEHMYGF
Ga0207681_1008054223300025923Switchgrass RhizosphereMNDANKGRFTSWRQALDSGTLTSEQIAVLEEMVKDGQAESIQGAASMLDWQDAIINKPEHMYGF
Ga0207681_1028809323300025923Switchgrass RhizosphereMENTPDKGKFTSWRLALDQDALTSEQLAVLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF
Ga0207681_1182107313300025923Switchgrass RhizosphereMDDLQDQGKITSWRQALDNGVLTSQQIAVLEEMVKEGQAESIEAAASMLDWQDAIINKPEHMYGF
Ga0207659_1000658223300025926Miscanthus RhizosphereMDNPQDQGKITSWRQALDNGVLTSQQIAVLEEMVKEGQAESIEAAASMLDWQDAIINKPEHMYGF
Ga0207659_1019400623300025926Miscanthus RhizosphereMENTPGKITSWRQALDQGLLTAQQLAVLDEMVTDGQADDRQAAASMLDWQDAIINKPEHMYGF
Ga0207644_1113695623300025931Switchgrass RhizosphereDANKGRFTSWRQALDSGTLTSEQIAVLEEMVKDGQAESIQGAASMLDWQDAIINKPEHMYGF
Ga0207686_1067579023300025934Miscanthus RhizosphereMESTDERPIQSWHQALVQGILTKEQLAVLEEMVKQGEAENIDAAASMLDWQDAIINKPEHMYGF
Ga0207670_1056547823300025936Switchgrass RhizosphereMNDANKGRFTSWRQALDSGTLTSEQIAVLEEMVKDGQAESIQGAASMLDWQDAIINK
Ga0207691_1022591423300025940Miscanthus RhizosphereMNDANKGRFTSWRQALDSGTLTSEQIAVLEEMVKDGQAESIQGAASMLDWQDAIINKPE
Ga0207689_1080929023300025942Miscanthus RhizosphereMENRITSWRQALDNGQLTAEQLAVLDEMVEQGQAVDRQAAASMLDWQDAIINKPEHMYGF
Ga0207689_1179280913300025942Miscanthus RhizosphereFKSWRQALDAELLTPEQLAVLDDMVKQGQAEDRQAAASMLDWQDAIINKPEHMYGF
Ga0207676_1154623723300026095Switchgrass RhizosphereMSSRMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESREAAASMLDWQDAIINKPEHMYGF
Ga0207674_1114913423300026116Corn RhizosphereMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESRAAAASMLDWQDAIINKPEHMYGF
Ga0209486_1002103623300027886Agricultural SoilMENSPEPGKITSWRQALDQGKLTSDQIAVLEGMVQEGQAENLQAAASMLDWQDAIINKPEHMYGF
Ga0209486_1011894823300027886Agricultural SoilMDTSPEQGKITSWRQALDQGTLTPEQTAVLEDMVKEGQAENLQAAASMLDWQDAIINKAEHMYGF
Ga0268264_1115227713300028381Switchgrass RhizosphereDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF
Ga0310888_1088395023300031538SoilMSSRMENTPDKGKFTSWRLALDQDALTSEQLAVLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF
Ga0310904_1014307923300031854SoilDRMSSRMENTPDKGKFTSWRLALDQDALKSEQLAVLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF
Ga0310892_1050858223300031858SoilRMSSRMENTPDKGKFTSWRLALDQDVLTSEQLALLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF
Ga0310900_1040021423300031908SoilMSSGMENTPDKGKFTSWRLALDQDALTSEQLAVLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF
Ga0310906_1143598813300032013SoilMDDTQDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHM
Ga0310890_1139603933300032075SoilDKGKFTSWRLALDQDALTSEQLAVLDEMVSEGQAESREAAASMLDWQDGIINKPEHMYGF
Ga0315912_1064950723300032157SoilMADQNPTPIKSWHQALLQGTLSKDQLAVLETMVRDGEAETIDAAASMLDWQDAIINKPEHMYGF
Ga0310889_1042596623300032179SoilMDDTQDKGKISSWRQALDNGALTAEQIAVLEEMVKEGQAENIQAAASMLDWQDAIINKPEHMYGF
Ga0310896_1011195323300032211SoilMSSGMENTPDKGKFTSWRLALDQDALTKEQLAVLDEMVSEGQAESREAAASMLDWQDAIINKPEHMYGF
Ga0310812_1054476323300032421SoilMDDMQDKGKINSWRQALDNGALSAEQIAVLEEMVKEGQAENLQAAASMLDWQDAIINKPEHMYGF
Ga0364925_0139916_374_5683300034147SedimentMESTDEGKIRSWHQALEQGVLTKEQLAVLEDMVQQGQAENIDAAASMLDWQDAIINKPEHMYGF
Ga0314793_112457_376_5613300034668SoilMEETKFKSWRQALDAELLTPEQLAVLDDMVKQGQAGDRQAAASMLDWQDAIINKPEHMYG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.