NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104531

Metagenome Family F104531

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104531
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 120 residues
Representative Sequence MSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVHDFVKGWTLPAL
Number of Associated Samples 89
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 18.00 %
% of genes near scaffold ends (potentially truncated) 97.00 %
% of genes from short scaffolds (< 2000 bps) 93.00 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (59.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(45.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 66.90%    β-sheet: 0.00%    Coil/Unstructured: 33.10%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF07722Peptidase_C26 6.00
PF00905Transpeptidase 3.00
PF00912Transgly 2.00
PF07007LprI 2.00
PF00158Sigma54_activat 2.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0744Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidaseCell wall/membrane/envelope biogenesis [M] 2.00
COG3755Uncharacterized conserved protein YecT, DUF1311 familyFunction unknown [S] 2.00
COG4953Membrane carboxypeptidase/penicillin-binding protein PbpCCell wall/membrane/envelope biogenesis [M] 2.00
COG5009Membrane carboxypeptidase/penicillin-binding proteinCell wall/membrane/envelope biogenesis [M] 2.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.00 %
UnclassifiedrootN/A41.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459015|G14TP7Y01B50FJAll Organisms → cellular organisms → Bacteria500Open in IMG/M
2228664022|INPgaii200_c1150905All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101421725All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300000789|JGI1027J11758_12254538All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300000890|JGI11643J12802_11463322Not Available634Open in IMG/M
3300000891|JGI10214J12806_10474317All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2146Open in IMG/M
3300000955|JGI1027J12803_100289667Not Available651Open in IMG/M
3300000955|JGI1027J12803_102974993All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia793Open in IMG/M
3300002126|JGI24035J26624_1025014Not Available639Open in IMG/M
3300004479|Ga0062595_101131056Not Available688Open in IMG/M
3300004479|Ga0062595_101209729Not Available671Open in IMG/M
3300005290|Ga0065712_10308918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Alkaliphilus → Alkaliphilus peptidifermentans847Open in IMG/M
3300005293|Ga0065715_10303351All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1036Open in IMG/M
3300005293|Ga0065715_11146678Not Available509Open in IMG/M
3300005294|Ga0065705_10869379Not Available586Open in IMG/M
3300005330|Ga0070690_100183758All Organisms → cellular organisms → Bacteria1446Open in IMG/M
3300005335|Ga0070666_11166550All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005336|Ga0070680_101871609Not Available520Open in IMG/M
3300005338|Ga0068868_100927689Not Available793Open in IMG/M
3300005366|Ga0070659_100403230All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300005366|Ga0070659_100876109All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300005444|Ga0070694_101954631All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005455|Ga0070663_101154987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Alkaliphilus → Alkaliphilus peptidifermentans679Open in IMG/M
3300005466|Ga0070685_10060356All Organisms → cellular organisms → Bacteria2217Open in IMG/M
3300005535|Ga0070684_100343024All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300005536|Ga0070697_102089268Not Available507Open in IMG/M
3300005539|Ga0068853_101805553Not Available593Open in IMG/M
3300005543|Ga0070672_101398979All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300005548|Ga0070665_100896505All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300005549|Ga0070704_101356042All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300005564|Ga0070664_101806704All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300005616|Ga0068852_102471996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Alkaliphilus → Alkaliphilus peptidifermentans540Open in IMG/M
3300005718|Ga0068866_10627147All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300005764|Ga0066903_104754128All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia722Open in IMG/M
3300007255|Ga0099791_10687739Not Available503Open in IMG/M
3300009551|Ga0105238_12763124Not Available527Open in IMG/M
3300009553|Ga0105249_11246585Not Available815Open in IMG/M
3300009792|Ga0126374_11266232All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300010046|Ga0126384_12114633Not Available540Open in IMG/M
3300010159|Ga0099796_10271019Not Available711Open in IMG/M
3300010360|Ga0126372_12000859All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300010375|Ga0105239_10515745All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1360Open in IMG/M
3300012582|Ga0137358_10168320All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300012892|Ga0157294_10073307All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia828Open in IMG/M
3300012914|Ga0157297_10109170Not Available843Open in IMG/M
3300012955|Ga0164298_10265336All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300012955|Ga0164298_10749273Not Available692Open in IMG/M
3300012955|Ga0164298_10920458Not Available638Open in IMG/M
3300012957|Ga0164303_10796522Not Available649Open in IMG/M
3300012961|Ga0164302_10035845All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2329Open in IMG/M
3300012961|Ga0164302_11523984Not Available552Open in IMG/M
3300012985|Ga0164308_11823590Not Available567Open in IMG/M
3300012986|Ga0164304_10396110All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300012988|Ga0164306_10453622All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300012989|Ga0164305_10625504All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia869Open in IMG/M
3300013102|Ga0157371_10315288All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300013105|Ga0157369_10751798All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300013503|Ga0120127_10158999All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300014325|Ga0163163_10047399All Organisms → cellular organisms → Bacteria4225Open in IMG/M
3300014325|Ga0163163_11655828All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300015261|Ga0182006_1103177All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300015373|Ga0132257_102204834Not Available713Open in IMG/M
3300015374|Ga0132255_103863354All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium636Open in IMG/M
3300018051|Ga0184620_10201471Not Available661Open in IMG/M
3300018071|Ga0184618_10380723Not Available599Open in IMG/M
3300019362|Ga0173479_10857623Not Available509Open in IMG/M
3300019873|Ga0193700_1024833All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300019882|Ga0193713_1025828All Organisms → cellular organisms → Bacteria1734Open in IMG/M
3300019883|Ga0193725_1023377All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300019996|Ga0193693_1036101All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300019997|Ga0193711_1035408Not Available619Open in IMG/M
3300020006|Ga0193735_1070813Not Available1007Open in IMG/M
3300021073|Ga0210378_10060053All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1495Open in IMG/M
3300022694|Ga0222623_10014489All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2904Open in IMG/M
3300024222|Ga0247691_1045143Not Available668Open in IMG/M
3300024232|Ga0247664_1082646All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia742Open in IMG/M
3300025271|Ga0207666_1024656All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300025315|Ga0207697_10000764All Organisms → cellular organisms → Bacteria18219Open in IMG/M
3300025315|Ga0207697_10127377All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300025898|Ga0207692_10699433All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300025901|Ga0207688_10502648Not Available759Open in IMG/M
3300025906|Ga0207699_10491771All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium885Open in IMG/M
3300025911|Ga0207654_10456917All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia896Open in IMG/M
3300025916|Ga0207663_10596259All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300025919|Ga0207657_10578752All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia877Open in IMG/M
3300025919|Ga0207657_11457122Not Available513Open in IMG/M
3300025923|Ga0207681_11658251Not Available535Open in IMG/M
3300025926|Ga0207659_11644209Not Available548Open in IMG/M
3300025930|Ga0207701_11187803All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300025931|Ga0207644_10116536All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2027Open in IMG/M
3300025937|Ga0207669_11392645Not Available597Open in IMG/M
3300025940|Ga0207691_11324747Not Available594Open in IMG/M
3300025944|Ga0207661_11726926Not Available571Open in IMG/M
3300025944|Ga0207661_12100533All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300026035|Ga0207703_10658168All Organisms → cellular organisms → Bacteria → Acidobacteria994Open in IMG/M
3300026078|Ga0207702_12186167Not Available542Open in IMG/M
3300026089|Ga0207648_10993109Not Available786Open in IMG/M
3300026118|Ga0207675_102036940Not Available591Open in IMG/M
3300031716|Ga0310813_12408608Not Available500Open in IMG/M
3300032074|Ga0308173_12177100Not Available523Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil20.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere6.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.00%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere3.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.00%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459015Litter degradation PV4EngineeredOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002126Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5Host-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019996Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300024222Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4PV_007044602170459015Switchgrass, Maize And Mischanthus LitterTSSANLTPMIWLNMPVLRSYILGLVVAHLAWLYFFTTGHLLWQSRPDNPKPAGLDTVVITSVAGMALSGFGLLLLGFAHLLNRFGLTGLLILEAAVFWLLKRDNCLSLTFWSGYFRISSKVGRFPAVCIYVLFLVLGYGNSATTPTTQ
INPgaii200_115090512228664022SoilVSVFGSYLLGLIVAHVAWFYFFTTGHLLSRRLPDDLQPIGVDTLVIXSVAGMALSGFGLLFLGFAHLLNGFGLISLLLVEAACFWLLKRDNWLSFVFW
INPhiseqgaiiFebDRAFT_10142172513300000364SoilMRCPIRANDLFTFSANLTPMIWLNMPVLRSYFLGLVVAHLVWLYFFTTGHLLWQSRPDNPKPARLDTVVITSVAGMALSGFGLLLLGFAHLLNRFGLTGLLILEVAVFWLLKGDNCLSLTFWRRILQNFVKGWTVPAFCIYVLFLXLGXPAILPPIAYDPVSYHFAYAADWANAG
JGI1027J11758_1225453813300000789SoilMRCPIRANDLFTFSANLTPMIWLNMPVLRSYFLGLVVAHLVWLYFFTXGHLLWQSRPDNPKPARLDTVVITSVAGMALSGFGLLFLGFAHLLNRFGLTGLLILEVAVFWLLKGDNCLSLTFWRRILQNFVKGWTVPAFCIYVLF
JGI11643J12802_1146332213300000890SoilMSVLWSYLLGLIVAHVAWLFFFTTGQLLWKSRPDNSKPVGLDTLVITSVAGIALSGFGLLLLGFAHLLNRFGLAGLLILEAGVFWLLKRDNWLSLIFWRRVVQDFVKGWTLPAVCIYVLFLALAIP
JGI10214J12806_1047431713300000891SoilMSVLWSYLLGLIVAHVAWLFFFTTGQLLWKSRPDNSKPVGLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAGVFWLLKRDNWLSLIFWRRVVQDFVKGWTLPAVCIYVLFLALAIPAIL
JGI1027J12803_10028966713300000955SoilMSVFGTYLLGLIVAHVGWLYFFTTGQLLWESRSENPRPVRLDTVVISSVAGMALSGFGLLLLGFGHLLNRFGFAGLLILEAAFFWLLKRDNWLSLSFWKRIVQDFVKGWTFPAFYIYVVFLALGLPAILPPTDSDPVT
JGI1027J12803_10297499323300000955SoilMSVLRSYLLGLIVAHAGWLFFFTTGRLLWKRQPDDSTPFRIDTLVITSVAGMALSGFGLLLLGFAQLLNPFGLAGLLVLEATLFRLLKGDNWLASIFWR
JGI24035J26624_102501423300002126Corn, Switchgrass And Miscanthus RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLV
Ga0062595_10113105613300004479SoilMSVFWSNLLGLIVAHVAWLFFFTTGQLLWKKPRDNSTPSRLDTLVITSVAGMALTGFGLLLLGFAHLLNPFGLAGLLVLEAALFRLLKRDNWLSLIFWRRIV
Ga0062595_10120972913300004479SoilMVVFFTTGQLLWESRSENPRPVRLDTVVISSVAGMALSGFGLLLLGFGHLLNRFGFAGLLILEAAFFWLLKRDNWLSLSFWKRIVQDFVKGWTFPAFYIYVV
Ga0065712_1030891813300005290Miscanthus RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWNCIV
Ga0065715_1030335123300005293Miscanthus RhizosphereMSLLTSYLLGLLVAHLAWLFFFTTGQLLWNRHGSDSQPFQLDTFVVTSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAALFWLLKRDKWLSLTFWKRIVRDFVKSWTLPAVCIYILFLAL
Ga0065715_1114667813300005293Miscanthus RhizosphereMSLLRSCLLGFVVVHVLWLFFFTTGQLLWKRHPDNSKPVRLDSIVITSVAGIALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFRLLKGDNWLSLIFWKRIV
Ga0065705_1086937923300005294Switchgrass RhizosphereMSVLWSYLLGLIVAHVLWLFFFTTGQLLWKSRPDNSKPVGLDTLVITSVAGIALSGFGLLLLGFAHLLNRFGLAGLLILEAGVFWLLKRDNWLSLIF
Ga0070690_10018375823300005330Switchgrass RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWNCIVRDFVESWTLPALCIYILFLALGIPAILPPTRGD
Ga0070666_1116655013300005335Switchgrass RhizosphereMIWLNMPVLRSYVLGLVVAHLVWLYFFTTGHLLWQSRPDNPKRARLDTVVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAAFWLLKRQNCLSVTFWRRILQDFVNGWTFPASCVYVLFLALGLPAIL
Ga0070680_10187160913300005336Corn RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLAGLVILNAAFFWLLKRDNWLS
Ga0068868_10092768913300005338Miscanthus RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLAGLVILNAAFFWLLKRDNWLSLTFWKRIVRDFVESWTLPALCIYILF
Ga0070659_10040323013300005366Corn RhizosphereMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLS
Ga0070659_10087610923300005366Corn RhizosphereMSVLWSYLLGLTVAHVAWLFFFTTGQLLWKSRPDNSKPVGLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAGVFWLLKRDNWLSLIFWRRVVQDFVKGWTLPAVCIYVLFLALAIPAILPPIRGDPLSYH
Ga0070694_10195463113300005444Corn, Switchgrass And Miscanthus RhizosphereMSVLSSYLLGLIVAHVAWLFFFTTGRLLRKRQSDNSIPFRIDTLVITSVAGMALSGFGLLLLGFAHLLNPFGLAGLLVLEAALFRLLKRDNWLSLIFWRRVVQDFVKGWTLPAVCIYVLFLALAIPAILPPIRG
Ga0070663_10115498713300005455Corn RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLRRDNWLSLFFWKRIVQEFIKSWTLSALGIYVLFLALGIPAILPPTHGD
Ga0070685_1006035613300005466Switchgrass RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWNCIVRDFVESWTLPALCIYILFLALGIPAILPPTRGDAVS
Ga0070684_10034302423300005535Corn RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLVFWKRIVRDFIKSWTLSALGIYVLFLALGIPAILPP
Ga0070697_10208926813300005536Corn, Switchgrass And Miscanthus RhizosphereMSLLRSCLLGFVVVHVLWLFFFTTGQLLWKRHPDNSKPVRLDSIVITSVAGIALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFRLLKGDNWLS*
Ga0068853_10180555313300005539Corn RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVHDFVK
Ga0070672_10139897913300005543Miscanthus RhizosphereMSVLRSYLLGLTVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVH
Ga0070665_10089650513300005548Switchgrass RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLVFWKRIVQEFIKSWTLSALCI
Ga0070704_10135604223300005549Corn, Switchgrass And Miscanthus RhizosphereMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVHDFVRGWTFPAVSIYVLFLALGIPAILPPTRGDP
Ga0070664_10180670413300005564Corn RhizosphereMIWLNMPVLRSYVLGLVVAHLVWLYFFTTGHLLWQSRPDNPKRARLDTVVITSVAGMALSGFGLLLLGFAHLLNRFGLTGLLILEVAVFWLLKGDNCLSLTFWRRILQNFVKGWTFPAFC
Ga0068852_10247199613300005616Corn RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWKRIVRDFVESWTLPALCIYILFLALGIPAILPPTRGDA
Ga0068866_1062714723300005718Miscanthus RhizosphereMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRQPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVHDFVQGWTLPAVSIYVLFLALGI
Ga0066903_10475412813300005764Tropical Forest SoilMSVLRSYLLGLIVAHVAWLFFFTTGQLLWKKRPDDSTAFPLDRLVITSVAGMALSGFGLLLLGFAHLLNPLGMAGLLGVEAVLFRLLKGANLLSLTFWRGLAQDFLAGWTLPAICIYVLFLALGIPAI
Ga0099791_1068773913300007255Vadose Zone SoilMSVLSSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNQFGLAGLLILEAAFFWLLKRDNWLSLIFWRCIVLDFVMGWTFQAVTIC
Ga0105238_1276312413300009551Corn RhizosphereVAHLAWLFFFTTGQLLWKRHPDNSKPFELDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWKRIVRDFVESWTLPALCIYILFLALGIPAILPPT
Ga0105249_1124658513300009553Switchgrass RhizosphereMSVLWSYLLGLIVAHVAWLFFFTTGQLLWKSRPDNSKPVGLDTLVITSVAGIALSGFGLLLLGFAHLLNRFGLAGLLILEAGVFWLLKRDNWLSLIFWRRVVQDFVKGWTLPAVCIYVL
Ga0126374_1126623213300009792Tropical Forest SoilMSVFWSYLLGLVVAHVAWLYFFTTGHLLWQSRPDNPQPVRLDILVVTSVAGMALLGFGLLFLGFVHLLNRFGFAGLLVSEATLFWLLKRDNWLSLIFWRGIVQEFVKALTFPAFCIYIVFLGLGSPAILPPTHSDPVRYHLAYA
Ga0126384_1211463313300010046Tropical Forest SoilMSILRSYLLGLIVAHVLWLFFFTTGRLLWESRPDTSKPVRLDTLLITSVAGMALSGFGLLFLGFAHCLNRFGLAGLVILEALLFRLLKRGNWLSLGFWRRVVQDFAKGW
Ga0099796_1027101913300010159Vadose Zone SoilMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNQFGLAGLLILEAAFFRVLKRDNWLSLIFWRRIVQDFVKGWTFPALFIY
Ga0126372_1200085913300010360Tropical Forest SoilMSVLRNYLLGLIVAHVAWLFFFTTGHLLWKKRPDDSTPFRLHTLVITSVAGMALSGFGLLLLGFAHLLNPFGLAGLLGVAAALFRLLKRGNWLSLTFWRRIVQDFLTGWTLPAIF
Ga0105239_1051574513300010375Corn RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLVFWKRIVRDFIKSWTLSALCVYVLFLALGIPAILPPTHGDPVSYHLA
Ga0137358_1016832013300012582Vadose Zone SoilVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNQFGLAGLLVLEAGFFWLLKRDNWLSFIFWRRIVHDFVKGWTF
Ga0157294_1007330713300012892SoilMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLRRDNWLSLVFWKRIVQEFIKSWTLSALCIYVLFLALGIPAILPPTHGDP
Ga0157297_1010917013300012914SoilVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAALFWLLKRDKWLSLTFWKRI
Ga0164298_1026533623300012955SoilMWYTRECLANVSVFGSYLLGLIVAHVAWFYFFTTGHLLLRRLPDDLQPIGVDTLVINSVAGMALSGFGLLFLGFAHLLNGFGLISLLLVEAACFWLLKRDNWLSFVFWRRIVRHFLKAWTLPAFFIYLLFLALGLPAILPPVFGDAVSYHL
Ga0164298_1074927323300012955SoilMYVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALCGFGLLLLGFAHLVNQFGLAGLLVLEAASFWWLKRDNWLSFIFWRRIVHDFFKGWTFPAVSIYVLFLA
Ga0164298_1092045813300012955SoilMSLLTSYLLGLLVAHLAWLFFFTTGQLLWNRHRSDSQPFQLDTFVVTSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAALFWLLKRDKWLSLTFWKRIVRDFVKSWTLPALCIYILF
Ga0164303_1079652213300012957SoilMAGRWLNMSVFWSYLLGLVVAHVAWLYFFTTGRLLSQNLPDNPEPARLDSLVVTSVAGMALSGFGLLFLGFAHVLNRFGFAGLLVSEAALFWLLKR
Ga0164302_1003584543300012961SoilMWYTRECLANVSVFGSYLLGLIVAHVAWFYFFTTGHLLLRRLPDDLQPIGVDTLVINSVAGMALSGFGLLFLGFAHLLNGFGLISLLLVEAACFWLLKRDNWLSFVFWRRIVRHFLKAWTLP
Ga0164302_1152398413300012961SoilMAGRWLNMSVFWSYLLGLVVAHVAWLYFFTTGRLLSQNLPDNPEPARLDSLVVTSVAGMALSGFGLLFLGFAHVLNRFGFAGLLVSEAALFWLLKRDN
Ga0164308_1182359023300012985SoilMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNQFGLAGLLVLGAAYFWLLKRDNWLSFIVWRRIVQDFVKGW
Ga0164304_1039611023300012986SoilMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRRSNNSKPFQLDTLVITSVAGMALSGFGLLLLGFSHLLNPFGLAGLLVLEAGFFWLLKRDNWLSFIFWRRIVHDFFEGWTFPAASIYVLFLALGIPAILPPTLGDPVSYHL
Ga0164306_1045362223300012988SoilMWYTRECLANVSVFGSYLLGLIVAHVAWFYFFTTGHLLLRRLPDDLQPIGVDTLVINSVAGMALSGFGLLFLGFAHLLNGFGLISLLLVEAACFWLLK
Ga0164305_1062550413300012989SoilMRQHATDTCILICRVINATPWLNMSLLRSYLLGLLVAHLAWLFFFTTGQLLWKRHRNDSQPFQLDTLVVTSVAGMALSGFGLLLLGFAHLLNAIGLGGLVILDAALFWLLKRDKWLSLTF
Ga0157371_1031528813300013102Corn RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLVFWKRIVRDFIKSWTLSALCVYV
Ga0157369_1075179813300013105Corn RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLVFWKRIVRDFIKSWTLSALGIYV
Ga0120127_1015899913300013503PermafrostVAHVVWLFFFTTGQLLWQSRPDNSKPVRLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFRVLKRDNWLSLIFWRRIVQDFVKGWTFPALFIYVLFLALGLPAILPPIGGDPVSYHFAYAADWANAGRIYVDP
Ga0163163_1004739913300014325Switchgrass RhizosphereMVWLNMPVLRSYFLGLVVIHLVWLYFFTTGHLLWQSRPDNPKPPRLDTVVITSVTGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAAFWLLKRQNCLSVTFWRQILQDFVTGWTFPASCVYVLFLALG
Ga0163163_1165582813300014325Switchgrass RhizosphereVAHLAWLFFFTTGQLLWKRHSDSPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWKRIVRDFVESWTLPALCIYILFLAVGIPAILPATRGDAVSYH
Ga0182006_110317723300015261RhizosphereMSVLRSYLLGLVVAHLAWLFFFATGHLLWKRHSDDSKPFQLDTFVTTSVAGMALSGFGLLFLGFAHWLNRFGLVGLLLVELALFWLLKRDNWLSLKFWRRMLHEFVKAWTLPACSIYVLFLALAIPAILPPARGDPVSYHFAY
Ga0132257_10220483413300015373Arabidopsis RhizosphereMSVFGNYLLGLIVAHVAWLYFFTTGQLLSRSRPDNSQSVGLDTLVITSVAGMALSGFGLLLLGFTHLLNGFGLAGLFIVEAALFRLLKRDNWLSLIFWGR
Ga0132255_10386335423300015374Arabidopsis RhizosphereYFLGLVVIHLVWLYFFTTGHLLWQSRPDNPKPPRLDTVVITSVTGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAAFWLLKRQNCLSVTFSNSSQLRRTPFKFSAGAE*
Ga0184620_1020147113300018051Groundwater SedimentMSVLRSYLLGLIVAHVVWLFFFTTGQLLWQSRPDNSKPVRLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFRMLKRDNWLSLIFWRRIVQDFVKGWTFPALFIYVLFLA
Ga0184618_1038072313300018071Groundwater SedimentMSVLRSYLLGLIVAHVVWLFFFTTGQLLWKSRPDNSKPVRLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSLIFWRRIVQDFVKGWTFPALCIYVLFLALGLPAILPPIGGDP
Ga0173479_1085762313300019362SoilMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLVFWKRIVRDFIKSWTLSALC
Ga0193700_102483323300019873SoilMSVLRSYLLGLIVVHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPFGLAGLLVLEAGFFWWLKRDNWLSFIFWRRIVH
Ga0193713_102582813300019882SoilMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSNNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNQFGLAGLLVLEAAFFWLLKRDNWLSFIFWRRIVHDFVKGWTFPAVSIYVLFLVLGIPAILPPTRGDPVSY
Ga0193725_102337733300019883SoilMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSNNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNQFGLAGLLVLEAGFFWLLKRDNWLSLIFWRRIVHDFVKGWTFPAVSIYVLFLALGIPAILPPTRGDPV
Ga0193693_103610113300019996SoilMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNQFGLAGLLVLEAGFFWLLKRDNWLSFIFWRRIVHDFVKGWTFPAVSIYVLFLALGIPAI
Ga0193711_103540823300019997SoilMSVLRSYLLGLIVAHVVWLFFFTTGQLLWKSRPDNSKPVRLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVHDFVK
Ga0193735_107081313300020006SoilMSVLRSYLLGLIVAHVVWLFFFTTGQLLWQSRPDNSKPVRLDTVVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLLLEAAFFRVLKRDNWLSLIFWRRIVQDF
Ga0210378_1006005313300021073Groundwater SedimentMSVLRSYLLGLIVAHVVWLFFFTTGQLLWKSRPDNSKPVRLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFRLLKRDNWLSLIFWRRIVQDFVK
Ga0222623_1001448933300022694Groundwater SedimentMSVLRSYLLGLIVAHVVWLFFFTTGQLLWKSRPDNSKPVRLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFRLLKRDNWLSLIFWRRIVQDFVKGWTFPALCIYVLFLALGIPAILPPIGGDPVSYHFAYAADWANAGRIYVDP
Ga0247691_104514313300024222SoilMIWLNMPVLRSYVLGLVVAHLLWLYFFTTGHLLWQSRPDNPKPAGLDTVVITSVAGMALSGFGLLLLGFAHLLNRFGLTGLLILEVAVFWLLKGDNCLSLTFWRRILQNFVKGWTFPAFCIYVLFLALGLPAILPPTAYDPVSYH
Ga0247664_108264613300024232SoilMPGAWFNMSVLRSYLLGLIVAHVAWLFFFTTGRLLRKRQSDNSIPFRLDTLVITSVAGMALSGFGLLLLGFAHLLNPFGLAGLLIVEAVLFRLLKRGNWLSLIFWRHIIQDFLTGW
Ga0207666_102465623300025271Corn, Switchgrass And Miscanthus RhizosphereMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVH
Ga0207697_1000076413300025315Corn, Switchgrass And Miscanthus RhizosphereMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVHDFVKGWTLPAL
Ga0207697_1012737713300025315Corn, Switchgrass And Miscanthus RhizosphereMIWLNMPVLRSYVLGLVVAHLVWLYFFTTGHLLWQSRPDNPKRARLDTVVITSVAGMALSGFGLLLLGFAHLLNRFGLTGLLILEVAVFWLLKGDNCLSLTFWRRILQNFVKSW
Ga0207692_1069943313300025898Corn, Switchgrass And Miscanthus RhizosphereMSVLRSYLLGLAVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGVAGLLALEAAFFWLLKRDNWLSLNFWRRIAQDFVKGWTLPAVSIYVLFLALGVPAILPPSGGDPVS
Ga0207688_1050264813300025901Corn, Switchgrass And Miscanthus RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSDNPKPFQIDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLMLEAAFFWWLKRDNWLSLTFWKRIVRDFVESWTLPALCIYILFLAVGIPAILPATNSRAH
Ga0207699_1049177123300025906Corn, Switchgrass And Miscanthus RhizosphereMPGAWFNMSVLRSYLLGLIVAHVAWLFFFTTGRLLRKRQSDNSIPFRIDTLVITSVAGMALSGFGLLLLGFAHLLNPFGLAGLLIVEAVLFRLLKRGNWLSLIFWRHIIQDFLTGWTLPAFSIYLLFLALGMPAILPPTHGDPVSYH
Ga0207654_1045691713300025911Corn RhizosphereMVWLNMPVLRSYFLGLVVIHLVWLYFFTTGHLLWQSRPDNPKPPRLDTVVITSVTGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAAFWLLKRQNCLSVTF
Ga0207663_1059625923300025916Corn, Switchgrass And Miscanthus RhizosphereMSVLRSYLLGLAVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGVAGLLALEAAFFWLLKRDNWLSLNFWRRIAQDFVKGWTLPAVSIYVLF
Ga0207657_1057875223300025919Corn RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLVFWKRIVQEFIKSWTLSALCIYVL
Ga0207657_1145712213300025919Corn RhizosphereMSVFWSYLLGLIVAHVAWLYFFTTGHLLWQSRSGNPQPVRLDTLVVTSVAGMALLGFGLLLLGFVHLLNRFGFAGLLVSEATLFWLLKRDNWLSLVFWRGIVQEFVKAWTFPAFCIY
Ga0207681_1165825113300025923Switchgrass RhizosphereMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDNSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVHDFVQ
Ga0207659_1164420913300025926Miscanthus RhizosphereMSVLRSYLLGLIVAHVAWLFFFTTGRLLRKRQSDNSIPFRIDTLVITSVAGMALSGFGLLLLGFAHLLNPFGLAGLLIVEAVLFRLLKRGNWLSLIFWRHIIQDFLTGWTLPAFSIYLLFLALGMPAILPPTHGDPVSYH
Ga0207701_1118780313300025930Corn, Switchgrass And Miscanthus RhizosphereMSVLWSYLLGLTVAHVAWLFFFTTGQLLWKSRPDNSKPVGLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAGVFWLLKRDNWLSLIFWRRVVQDFVKGWTLPAVCIYVL
Ga0207644_1011653613300025931Switchgrass RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDSPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWKRIV
Ga0207669_1139264513300025937Miscanthus RhizosphereMSVLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDDSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLAGLVILNAAFFWLLKRDNWLSLTFWKRIVRDFVKSWTLP
Ga0207691_1132474713300025940Miscanthus RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWKRIVRDFVESWTLPALCIYILFLAVGIPAILPPTRGDA
Ga0207661_1172692623300025944Corn RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWK
Ga0207661_1210053313300025944Corn RhizosphereMSALKSYLLGLIVAHVAWLFFFTTGRLLWKTRPDDSPFRLDRLVITSVAGMALSGFGLLLLGFAHLLNPFGLAALLVLEAALFWFLKGDNWLSLDFWRLVV
Ga0207703_1065816823300026035Switchgrass RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHSDSPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNLIGFAGLVILDAAFFWLLKRDNWLNSYIVVCL
Ga0207702_1218616713300026078Corn RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLVFWKRIVRDFIKSWTLSALCVYVLF
Ga0207648_1099310913300026089Miscanthus RhizosphereMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSDNPKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNPIGLGGLVILDAAFFWLLKRDNWLSLTFWKRIVRDFIKSWTLPALCIYILFLALGIPA
Ga0207675_10203694013300026118Switchgrass RhizosphereMSLLRSYLLGLIVAHLAWLFFFTTGQLLWKRHPDKSKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNRFGLAGLLILEAAFFWWLKRDNWLSFIFWRRIVHDFVKGWTLPA
Ga0310813_1240860823300031716SoilMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRHSDNRKPFQLDTLVITSVAGMALSGFGLLLLGFAHLLNQFGLAALLMLEAAFFWLLKRDNCVSLIFWRRVLQEFAKAWTLPALSIYILFLALGVPAILPPM
Ga0308173_1217710013300032074SoilMSILRSYLLGLLVAHLAWLLFFTTGQLLWKRPSNDSKPFQLDTLVITSVAGMALCGFALLLLGFAHSLNPFGLAGLVIFEAALFWLLKRDNWLSLVFWKRIVQDFIKSWTFSALG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.