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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F104524 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 51 residues |
| Representative Sequence | MPRESLDALENLPKEAPGQVAFGQLEDEGPRMPDEAPAGLEQPLLQARE |
| Number of Associated Samples | 82 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 1.00 % |
| % of genes from short scaffolds (< 2000 bps) | 1.00 % |
| Associated GOLD sequencing projects | 78 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.15 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (99.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (31.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (37.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Fibrous | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.15 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF08241 | Methyltransf_11 | 3.00 |
| PF00535 | Glycos_transf_2 | 2.00 |
| PF13701 | DDE_Tnp_1_4 | 2.00 |
| PF03994 | DUF350 | 2.00 |
| PF07883 | Cupin_2 | 2.00 |
| PF07690 | MFS_1 | 2.00 |
| PF01527 | HTH_Tnp_1 | 2.00 |
| PF13384 | HTH_23 | 1.00 |
| PF10518 | TAT_signal | 1.00 |
| PF14499 | DUF4437 | 1.00 |
| PF12836 | HHH_3 | 1.00 |
| PF13683 | rve_3 | 1.00 |
| PF13649 | Methyltransf_25 | 1.00 |
| PF04453 | LptD | 1.00 |
| PF01553 | Acyltransferase | 1.00 |
| PF02738 | MoCoBD_1 | 1.00 |
| PF13676 | TIR_2 | 1.00 |
| PF00291 | PALP | 1.00 |
| PF11583 | AurF | 1.00 |
| PF13188 | PAS_8 | 1.00 |
| PF01047 | MarR | 1.00 |
| PF02776 | TPP_enzyme_N | 1.00 |
| PF01381 | HTH_3 | 1.00 |
| PF13551 | HTH_29 | 1.00 |
| PF01590 | GAF | 1.00 |
| PF00589 | Phage_integrase | 1.00 |
| PF01229 | Glyco_hydro_39 | 1.00 |
| PF00892 | EamA | 1.00 |
| PF09721 | Exosortase_EpsH | 1.00 |
| PF00775 | Dioxygenase_C | 1.00 |
| PF00873 | ACR_tran | 1.00 |
| PF13561 | adh_short_C2 | 1.00 |
| PF05368 | NmrA | 1.00 |
| PF00196 | GerE | 1.00 |
| PF03320 | FBPase_glpX | 1.00 |
| PF00072 | Response_reg | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG1452 | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA) | Cell wall/membrane/envelope biogenesis [M] | 1.00 |
| COG1494 | Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein | Carbohydrate transport and metabolism [G] | 1.00 |
| COG3485 | Protocatechuate 3,4-dioxygenase beta subunit | Secondary metabolites biosynthesis, transport and catabolism [Q] | 1.00 |
| COG3664 | Beta-xylosidase | Carbohydrate transport and metabolism [G] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 99.00 % |
| All Organisms | root | All Organisms | 1.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300011270|Ga0137391_10410330 | All Organisms → cellular organisms → Bacteria | 1156 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 26.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 9.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 7.00% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 6.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 5.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 5.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 5.00% |
| Thermal Springs | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs | 4.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 4.00% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 3.00% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.00% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 2.00% |
| Deep Subsurface Sediment | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment | 2.00% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 1.00% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment | 1.00% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 1.00% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 1.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.00% |
| Beach Aquifer Porewater | Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil | 1.00% |
| Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland | 1.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Loam → Unclassified → Soil | 1.00% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2140918007 | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300002558 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm | Environmental | Open in IMG/M |
| 3300004020 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 | Environmental | Open in IMG/M |
| 3300005180 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
| 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
| 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
| 3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
| 3300005558 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 | Environmental | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Environmental | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009444 | Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 | Environmental | Open in IMG/M |
| 3300009538 | Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - H-2W | Environmental | Open in IMG/M |
| 3300009549 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 | Environmental | Open in IMG/M |
| 3300009634 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 | Environmental | Open in IMG/M |
| 3300009802 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60 | Environmental | Open in IMG/M |
| 3300009807 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 | Environmental | Open in IMG/M |
| 3300009810 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 | Environmental | Open in IMG/M |
| 3300009837 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 | Environmental | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010336 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010391 | Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
| 3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
| 3300012396 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012918 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300014885 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D | Environmental | Open in IMG/M |
| 3300015359 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015 | Environmental | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
| 3300017659 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300017975 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
| 3300018079 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1 | Environmental | Open in IMG/M |
| 3300018090 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300021051 | Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos A1 | Environmental | Open in IMG/M |
| 3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300025149 | Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025157 | Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes) | Environmental | Open in IMG/M |
| 3300025319 | Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1 | Environmental | Open in IMG/M |
| 3300025326 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025477 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes) | Environmental | Open in IMG/M |
| 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026298 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes) | Environmental | Open in IMG/M |
| 3300026536 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes) | Environmental | Open in IMG/M |
| 3300027187 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60 (SPAdes) | Environmental | Open in IMG/M |
| 3300027379 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes) | Environmental | Open in IMG/M |
| 3300031549 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24 | Environmental | Open in IMG/M |
| 3300031561 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031763 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29 | Environmental | Open in IMG/M |
| 3300031768 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22 | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300032054 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23 | Environmental | Open in IMG/M |
| 3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
| 3300032516 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0 | Environmental | Open in IMG/M |
| 3300033814 | Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17 | Environmental | Open in IMG/M |
| 3300033977 | Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| A_all_C_01314260 | 2140918007 | Soil | MPRAALDAPEDLPTQALRHVAFGQLEDQVPRMPDETPDGLEEPLLAARQGPALDG |
| JGI1027J12803_1018896333 | 3300000955 | Soil | MPRQPLDVGKDLAKERSSQVTFGELQGEVPGVPDQPPAGLEEPLLQA |
| JGI25385J37094_101711731 | 3300002558 | Grasslands Soil | MPGESLDALENLPKEAPRQGAFGELQGEVPGMSDEPRAGLEEPLLEA |
| Ga0055440_101421071 | 3300004020 | Natural And Restored Wetlands | MPRESLDAPENLPKEALRQAAVGRAGGEVARIPDETPAASPIGWCPP |
| Ga0066685_100574866 | 3300005180 | Soil | VPREPLDALENLPKEAPRQVAFGELQGKVPGMPDEPRAGLEPLLEAR* |
| Ga0070708_1013907912 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | VPPEPLDALENLPEEAPRQVAFGELQGGVPRMPDEPRTGLEEPLLET |
| Ga0070706_10000528117 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | VPREPLDALENLSKEAPRQVAFGELQGEVPRMPDQPPARLEQALLQARQ* |
| Ga0070706_1002680702 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | VPRESLDAPEDLPKPPPRQLAFGELEREVPRVPNQPPAECEEALPFGPASQ* |
| Ga0070699_1005346063 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MPGESLDAPDDLPKQALCQVALGQLEHEVPGMSDQPPAGLEEPLLEARQGPAL |
| Ga0070696_1000236493 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | MPRQPLDALENLPKERPSQVAFGELQGEGPGVPDQPRAGLEQPLLETRERPAAAC* |
| Ga0066692_106830721 | 3300005555 | Soil | MPRESLDAPDDLPKQALCQVALGQLEHEVPGMSDQPPAGLEEPLLE |
| Ga0066698_100374721 | 3300005558 | Soil | MARESLDASENLPKESPRQVAFRKPQDEVPGMSDEAPAGLE* |
| Ga0066698_100680164 | 3300005558 | Soil | VPCESLDAPENLPKEGPRQVALGQLQDEVPGVSNQTPTGLEQPLLQARQGPA |
| Ga0066698_101183322 | 3300005558 | Soil | MPRESPDAPEDLPKEAPGQVTFGQLEDEVPSMPDEPPAGLEEPLLETRQRPALDGERQDQSA* |
| Ga0068861_1002810462 | 3300005719 | Switchgrass Rhizosphere | MPRQPLDALENLPKERPSQVAFGELQGEVSGVPDQPRAGLEQPLLETRERPAAAC* |
| Ga0066903_1059881913 | 3300005764 | Tropical Forest Soil | MPRQPLDAHEDLANEGPCQVTAGELQGEVSGVPDQPRAGL* |
| Ga0099794_100018704 | 3300007265 | Vadose Zone Soil | MPRESLDALENLPKEAPGQVAFGQLEDEGPRMPDEAPAGLEQPLLQARE* |
| Ga0066710_10004816110 | 3300009012 | Grasslands Soil | VPRESRDTPENLPKEAPRQVALGQLEYEVPRMPDQPPAGLKEPLLE |
| Ga0066710_1003699661 | 3300009012 | Grasslands Soil | PRESPDAPEDLPKEAPGQVTFGQLEDEVPSMPDEPPAGLEEPLLETRQRPALDGERQDQS |
| Ga0099829_114231681 | 3300009038 | Vadose Zone Soil | VPREPLDAPEDLPKQALRQVAFAQLQDEVPHMSDEAPAVLEQALLQSRQRPIPG* |
| Ga0099830_104868921 | 3300009088 | Vadose Zone Soil | VPRESLDAPNDLTDEAPCQGAFSQLKDEVPRMPDQAPAGLEEPVLQ |
| Ga0099828_101245203 | 3300009089 | Vadose Zone Soil | MPSESLDAPENLPKERWRQVTFGQLQDEVPGMPNEAPAGLEQALLQARPRP* |
| Ga0099828_107257753 | 3300009089 | Vadose Zone Soil | MPRESLDAPEDLPKQVSRQVALGQLEDEVPRMPDEAPAGLEEPLLEARQGP |
| Ga0099828_118031921 | 3300009089 | Vadose Zone Soil | MPRESLDALENLPKEAPGLVAFGQLEDEVPSVPDEAPAGLEEPLLEARQRPALGWQTA |
| Ga0099827_101788151 | 3300009090 | Vadose Zone Soil | MPRESLDAPENLPKEAPRQVAVGQLEHEVPCMPDQAPAGLEI* |
| Ga0099827_106662702 | 3300009090 | Vadose Zone Soil | MPRESLDAPENLPKEATGQVAFGELRGEVSGMPNEAYARPEQPPLETRQG |
| Ga0105241_106180911 | 3300009174 | Corn Rhizosphere | PLDALENLPKERPSQVAFGELQGEGPGVPDQPRAGLEQPLLETRERPAAAC* |
| Ga0114945_103784102 | 3300009444 | Thermal Springs | MPRESLDAREYLPKLAPRQAALDKLEEEVSCMPDEAPASLAEPLL* |
| Ga0114945_105568151 | 3300009444 | Thermal Springs | MPRESLDAPEDLPKQALRQVAPGQLEPEVPGMSHETPRGLEEPLL* |
| Ga0129287_100181642 | 3300009538 | Beach Aquifer Porewater | VPRESLDAPEDLPKEAPRQVALGPLEAEVPRMSDEPPAGLEEPLPDHHDQRR* |
| Ga0116137_10124581 | 3300009549 | Peatland | MPRESLDAPEALPNEAPRQVAFSKLENVMPRMPDQPPASLEEPLLEARQGAVLDGEGEGEPAQEIAEVVGD |
| Ga0116124_10353953 | 3300009634 | Peatland | MPRESLDAPEALPNEAPRQVAFSKLENVMPRMPDQPPASLEEPLLEARQGAVLDGEGEG |
| Ga0105073_10468101 | 3300009802 | Groundwater Sand | VPRESLDAPEDLPKQALCQVALGQLEDEVSRMPDETPAGLEQPLLEARQRPTLNGEGQNKSASLGS* |
| Ga0105061_10332831 | 3300009807 | Groundwater Sand | VPRESLDAPEDLPKQAPRQVALGKLQDEVPSIPDEAPACLEESLLEARQ* |
| Ga0105088_10426311 | 3300009810 | Groundwater Sand | PPLVRPRSSCPRFVCGPRSGGEPRESLDAPEDLPKQAPRQVALGKLQDEVPSIPDEAPACLEESLLEARQ* |
| Ga0105058_10256953 | 3300009837 | Groundwater Sand | VCGPRSGGEPRESLDAPEDLPKQAPRQVALGKLQDEVPSIPDEAPACLEESLLEARQ* |
| Ga0126380_112218611 | 3300010043 | Tropical Forest Soil | MPCEPFDAAENLPKEGSRQVALGRLQGEVPDMPDQPTAGLEEPLLKARERPVVDDNG* |
| Ga0126382_106325402 | 3300010047 | Tropical Forest Soil | VPRESLDAPKNLPKEGSRQVALGELQDEVPGMPDQPPAGLEEPLLQFASSVS* |
| Ga0134071_104365542 | 3300010336 | Grasslands Soil | MPRESPDAPEDLPKEAPGQVTFGQLKDEVPSMPDEPPAGLEESLLETRQRPALDGERQD |
| Ga0134071_105274662 | 3300010336 | Grasslands Soil | MPCEPLDALKNLTKEVPRQVAFGKLQGEVPGMPDEASARPEQPLLEARE |
| Ga0126379_118180371 | 3300010366 | Tropical Forest Soil | SFDAPKDLREQTRRQVALGELQDEVPGMPDEASAGLEEPLLEARQ* |
| Ga0136847_114559892 | 3300010391 | Freshwater Sediment | MPRESLDALENLTKEVPRQVAFGELQGEVPGMLDEASARPEQPLLEAREGPALD |
| Ga0126383_136890171 | 3300010398 | Tropical Forest Soil | MPREWLDTAENLPKERRRQVGFGQLEDEVSGVSEQPPPGLEQPLLQT |
| Ga0134121_100801613 | 3300010401 | Terrestrial Soil | MPRQPLAALEILPKERPSQVAFGELQGEGPGVPDQPRAGLEQPLLETRERPAAAC* |
| Ga0137391_101950701 | 3300011270 | Vadose Zone Soil | MPRESLDAPEDLPKHVSRQVALGQLEDEVPRMPDEAPAGLEEPLLEARQGPALDGERQ |
| Ga0137391_104103302 | 3300011270 | Vadose Zone Soil | MPRESLDAPENLPKEFPRQVAPGELEHEVPGIADQASTGLEEPLLE |
| Ga0137393_113019192 | 3300011271 | Vadose Zone Soil | VPREPLDALENLPKEAPRQVALRELQDEVPGMSDGPRAGLEEPLLEARQGP |
| Ga0137388_101557691 | 3300012189 | Vadose Zone Soil | MPRESLDAPEDLLKHVSRQVALGQLEDEVPRMPDEAPAGLEEPLLEARQGPALD |
| Ga0137388_101681293 | 3300012189 | Vadose Zone Soil | MPRESRNVPEDLPKERRCQVALGQLEDEVPGMADEATAGLEQPLLEAREGPALDGERQ |
| Ga0137388_103127554 | 3300012189 | Vadose Zone Soil | MPREALDAPDDLPKQALCQVALGQLEHEVPGMPDQAPAGLEQPLLEARQ* |
| Ga0137363_102347931 | 3300012202 | Vadose Zone Soil | VPRESLDGPENLPEEGPRQAALSQLQDEEPRVPDEAAAGLEESLLEARQGPALDGTG* |
| Ga0137363_104787261 | 3300012202 | Vadose Zone Soil | MPRESLDALENLPKEAPGQVAFGQLEEEGPRMQDEAPAGLEQPLLQARE* |
| Ga0137363_112197902 | 3300012202 | Vadose Zone Soil | VPREPLDALENLPQEAPRQVTFGELQGEVPGMPDEPRAGLEPLLEAR* |
| Ga0137381_112707051 | 3300012207 | Vadose Zone Soil | MPRQSLDAPKDLPKQTSRQVAFGQLEDEVSRMPDEAPAGLEKSLLEARQRPVLNGQG |
| Ga0137378_117651462 | 3300012210 | Vadose Zone Soil | MPRELLDAAKDLPKEAPRQVAFGQLEHEVPRISDEAPAGFEQPLLRARE* |
| Ga0137377_105493311 | 3300012211 | Vadose Zone Soil | VPREPLDALENLPKEAPRQVAFGELQGEVPGMPDQPPARLKQALLQARE* |
| Ga0137377_107945452 | 3300012211 | Vadose Zone Soil | MARESLDASENLPKESPRQVAFRKPQDEVPGMSDEAPAGLE |
| Ga0137360_108108741 | 3300012361 | Vadose Zone Soil | VPPESLDAPDDLPEEAPCQVAFSQLKDEVPRMPDEAATSLEEPLLETRQGPAL |
| Ga0137361_107423811 | 3300012362 | Vadose Zone Soil | PLDALENLPKEAPRQVAFGELEGEVPGMSDAAPALLEQPLLDGS* |
| Ga0137390_114862593 | 3300012363 | Vadose Zone Soil | MPCESVDAPENLPEQARRQVAVGQLQDEVPRMPDETSAGLEESLLGTRQRPAFDGTGQG |
| Ga0134057_10083281 | 3300012396 | Grasslands Soil | PKEAPRQVTFGELQGEVPGIPDERRAGLEEPLLEAR* |
| Ga0137396_102512812 | 3300012918 | Vadose Zone Soil | VPCESLDARVDLPKEEPCQVAFGKVQGEVPSMPDEASARLEEPLL |
| Ga0126375_114568572 | 3300012948 | Tropical Forest Soil | MPRQPLDAPENLPKEAGCQMALGQLEDEAPRMSNEAPAGLEEPLLET |
| Ga0180063_10147241 | 3300014885 | Soil | MPREPLDSVENPPKEAPCQVALGQPEHEVPSMPDKAPAGLEQPLLET |
| Ga0134085_102005913 | 3300015359 | Grasslands Soil | MPSESLDAPENLPKEAPRQVALGQLKDEVPRMPDQAPTGLEQPLLETRQGPAVDGDGPP |
| Ga0132257_1004847342 | 3300015373 | Arabidopsis Rhizosphere | VPRQLLDACENLTKEGASQVTFGKLQGEVPRKPDQPSARLE* |
| Ga0182032_111027611 | 3300016357 | Soil | MPRESLDAPENLPEEAPRQVALGKLQDEVPGMPDQASAGLERSLLQ |
| Ga0134083_106018181 | 3300017659 | Grasslands Soil | MPRESLDALENLPKEAPRQVAFGQLEDEVPRMPDEAPAGFEQPLLHRAGE |
| Ga0187782_114250281 | 3300017975 | Tropical Peatland | MPREALDAPKDLPEEASRQVAFGQLQDEVPGMPDKSPAGLEYPLLQARQ |
| Ga0184627_102133571 | 3300018079 | Groundwater Sediment | MPREPLDAVENLPKEAPRQVALGQLEHEEPSMPDKAPASLEQPLLEI |
| Ga0187770_103021581 | 3300018090 | Tropical Peatland | MPREALDASKDLPEEASRQVAFGQLQDEVPGMPDKPPAGLEYPLLQARQ |
| Ga0206224_10178912 | 3300021051 | Deep Subsurface Sediment | MPREPLDAVENPPKEAPCQVALGQLEHEVPSMPDEAPAGLEQPLLEMREG |
| Ga0206224_10229442 | 3300021051 | Deep Subsurface Sediment | MPRDSLDAPKNLPNKGPRQVALGQLEHEVPCMPDQLPVGLEEPLLEARQGPS |
| Ga0179596_104866531 | 3300021086 | Vadose Zone Soil | MPRESLDALENLPKEAPGQVAFGQLEDEGPRMPDEAPAGLEQPLLQARE |
| Ga0209827_108688372 | 3300025149 | Thermal Springs | MPRESLDAREYLPKLAPRQAALDKLEEEVSCMPDEAPASLAEPLL |
| Ga0209399_100700621 | 3300025157 | Thermal Springs | MPRESLDAPEHLSKEALCQVAFSKLEDVVPGGPDEAPAGLEQSLLEARQG |
| Ga0209520_100250772 | 3300025319 | Soil | MPRESLDPPENLPTQAVRQVAFGRLEDEVPRMPDEAPAGLE |
| Ga0209342_107536561 | 3300025326 | Soil | MPCELLDAPQDLAKEALCQVAFGKLEDEVSRMPDEAPAGLEEPLLEARQ |
| Ga0208192_10285883 | 3300025477 | Peatland | MPRESLDAPEALPNEAPRQVAFSKLENVMPRMPDQPPASLEEPLLEARQGAVLDGEGEGEPA |
| Ga0207646_106260552 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | VPREPLDALENLSKEAPRQVAFGELQGEVPRMPDQPPARLEQALLQARQ |
| Ga0207646_109578401 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MPCEALDAVENPPKEAPGQVARAQLEHEVPRMPDQLPAGLEQPLLET |
| Ga0207681_103040131 | 3300025923 | Switchgrass Rhizosphere | MPRQPLDALENLPKERPSQVAFGELQGEVSGVPDQPRAGLEQPLLETRERPAAAC |
| Ga0209236_11118712 | 3300026298 | Grasslands Soil | VPREPLDALENLPKEAPRQVAFGELQGEVPGMPDEPRAGLEPLLEAR |
| Ga0209158_12393212 | 3300026333 | Soil | VPREPLDALENLPQEAPRQVTFGELQGEVPGMPDEPRAGLEPLLEAR |
| Ga0209158_12638931 | 3300026333 | Soil | PLDALENLPKEAPRQVAFGELQGKVPGMPDEPRAGLEPLLEAR |
| Ga0209058_10438135 | 3300026536 | Soil | MARESLDASENLPKESPRQVAFRKPQDEVPGMSDEAPAG |
| Ga0209869_10449371 | 3300027187 | Groundwater Sand | LPDALENLPEEAPRQVAFSELEGEAPCMPDQPSARLEQALLQA |
| Ga0209842_10346253 | 3300027379 | Groundwater Sand | VCGPRSGGEPRESLDAPEDLPKQAPRQVALGKLQDEVPSIPDEAPACLEESLLEARQ |
| Ga0318571_101555072 | 3300031549 | Soil | MPRESLDAPENLPEEAPRQVALGKLQDEVPGMPDQASAGLERSLLQTGQ |
| Ga0318528_102228622 | 3300031561 | Soil | MPRESLDAPENLPEEAPRQVALGKLQDEVPGMPDQASAGLEQSLLQTGQ |
| Ga0307469_100693572 | 3300031720 | Hardwood Forest Soil | VRRESLDAPEDLPKERWRQVAFGQLQDEVPRVSNEAPAGLEQALLEARQILRDARRGEEP |
| Ga0307468_1019345121 | 3300031740 | Hardwood Forest Soil | VRRESLDAPEDLPKERWRQVAFGQLQDEVPRVSNEAPAGLEQVLLEARQILRDARRGEEP |
| Ga0318537_103213632 | 3300031763 | Soil | MPRESLDTPKDLPKEAPRQVALGQLEHEVPRMPDQPPAGLEEPLLE |
| Ga0318509_108624191 | 3300031768 | Soil | MPRESLDAAENLLEEAPRQVALGELQDEVPAMPDEASAGLEESLLEARQG |
| Ga0306921_123971031 | 3300031912 | Soil | MPRESLDAPENLPEEAPRQVALGKLQDEVPGMPDQASAGLERSLLQT |
| Ga0318570_100760302 | 3300032054 | Soil | MPRESLDAPENLPEEAPRQVALGKLQDEVPGMPDQVSAGLERSLLQTGQ |
| Ga0307470_111903962 | 3300032174 | Hardwood Forest Soil | MPPQPLDVGKDLAKERSSQVTFGELQGEVPGVADQPPAGLEEPLLQARERPVLDGDGQHQPTE |
| Ga0315273_121116812 | 3300032516 | Sediment | MPRQPLDPVENPPKEAPCQVALGQLEHEVPSMPDEAPAGLEQPLL |
| Ga0364930_0231872_2_193 | 3300033814 | Sediment | MPREPLDAPENLPKQALRQVAFGQLEDTVPRMPDEAPAGGDEPRLEARQGPALDGERQDSRRRR |
| Ga0314861_0104052_961_1110 | 3300033977 | Peatland | MPREALDASKDLPEEASRQVAFGQLQDEVPGMPDKSPAGLEYPLLQARQ |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |