NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104482

Metagenome / Metatranscriptome Family F104482

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104482
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 74 residues
Representative Sequence MTSEEFEKAMKAQGRLVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Number of Associated Samples 67
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.00 %
% of genes near scaffold ends (potentially truncated) 17.00 %
% of genes from short scaffolds (< 2000 bps) 56.00 %
Associated GOLD sequencing projects 61
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (82.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(32.000 % of family members)
Environment Ontology (ENVO) Unclassified
(83.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(94.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 38.03%    β-sheet: 29.58%    Coil/Unstructured: 32.39%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF05496RuvB_N 14.00
PF00383dCMP_cyt_deam_1 6.00
PF01068DNA_ligase_A_M 3.00
PF067253D 2.00
PF13224DUF4032 1.00
PF00268Ribonuc_red_sm 1.00
PF05050Methyltransf_21 1.00
PF13847Methyltransf_31 1.00
PF10504DUF2452 1.00
PF03567Sulfotransfer_2 1.00
PF05491RuvB_C 1.00
PF12951PATR 1.00
PF00085Thioredoxin 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2255Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvBReplication, recombination and repair [L] 15.00
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 3.00
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 3.00
COG0208Ribonucleotide reductase beta subunit, ferritin-like domainNucleotide transport and metabolism [F] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.00 %
All OrganismsrootAll Organisms18.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000736|JGI12547J11936_1018017Not Available1724Open in IMG/M
3300000736|JGI12547J11936_1061510Not Available734Open in IMG/M
3300000736|JGI12547J11936_1067822Not Available685Open in IMG/M
3300002835|B570J40625_100006962All Organisms → cellular organisms → Bacteria20895Open in IMG/M
3300003277|JGI25908J49247_10078639Not Available816Open in IMG/M
3300003490|JGI25926J51410_1006116Not Available2506Open in IMG/M
3300003493|JGI25923J51411_1010504All Organisms → Viruses → Predicted Viral2005Open in IMG/M
3300004460|Ga0066222_1232792Not Available699Open in IMG/M
3300004792|Ga0007761_11367868Not Available513Open in IMG/M
3300004810|Ga0007757_11507120Not Available1112Open in IMG/M
3300005581|Ga0049081_10197694Not Available722Open in IMG/M
3300005582|Ga0049080_10127449Not Available858Open in IMG/M
3300007735|Ga0104988_10971Not Available52305Open in IMG/M
3300008119|Ga0114354_1126519Not Available981Open in IMG/M
3300008258|Ga0114840_1000392All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium9664Open in IMG/M
3300009068|Ga0114973_10018909Not Available4307Open in IMG/M
3300009068|Ga0114973_10127988Not Available1425Open in IMG/M
3300009149|Ga0114918_10241455Not Available1031Open in IMG/M
3300009151|Ga0114962_10508779Not Available636Open in IMG/M
3300009152|Ga0114980_10008172Not Available6824Open in IMG/M
3300009154|Ga0114963_10145449Not Available1411Open in IMG/M
3300009154|Ga0114963_10145933Not Available1408Open in IMG/M
3300009155|Ga0114968_10011714All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium6271Open in IMG/M
3300009159|Ga0114978_10434302Not Available781Open in IMG/M
3300009160|Ga0114981_10582074Not Available595Open in IMG/M
3300009180|Ga0114979_10195611Not Available1226Open in IMG/M
3300009183|Ga0114974_10682547Not Available559Open in IMG/M
3300009187|Ga0114972_10050594Not Available2854Open in IMG/M
3300010158|Ga0114960_10089721Not Available1730Open in IMG/M
3300010885|Ga0133913_10346645All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium3930Open in IMG/M
3300010885|Ga0133913_13322829All Organisms → Viruses → Predicted Viral1057Open in IMG/M
3300011010|Ga0139557_1005029Not Available2785Open in IMG/M
3300012000|Ga0119951_1139382Not Available535Open in IMG/M
3300012013|Ga0153805_1004810Not Available2403Open in IMG/M
3300012017|Ga0153801_1001525Not Available4836Open in IMG/M
3300012666|Ga0157498_1001720All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium3859Open in IMG/M
3300013006|Ga0164294_10011271Not Available7438Open in IMG/M
3300013006|Ga0164294_10272329All Organisms → Viruses → Predicted Viral1180Open in IMG/M
3300013006|Ga0164294_11178426Not Available514Open in IMG/M
3300013372|Ga0177922_10072372Not Available596Open in IMG/M
3300013372|Ga0177922_10193951Not Available961Open in IMG/M
3300014050|Ga0119952_1060176Not Available994Open in IMG/M
3300014819|Ga0119954_1008324All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium2479Open in IMG/M
3300017701|Ga0181364_1036543Not Available789Open in IMG/M
3300017701|Ga0181364_1048870Not Available665Open in IMG/M
3300017774|Ga0181358_1150806Not Available794Open in IMG/M
3300017774|Ga0181358_1216840Not Available618Open in IMG/M
3300017785|Ga0181355_1141045Not Available977Open in IMG/M
3300019784|Ga0181359_1002328Not Available5472Open in IMG/M
3300019784|Ga0181359_1017010Not Available2709Open in IMG/M
3300019784|Ga0181359_1264905Not Available513Open in IMG/M
3300020205|Ga0211731_10526196Not Available1043Open in IMG/M
3300020498|Ga0208050_1026066Not Available591Open in IMG/M
3300021962|Ga0222713_10543088Not Available688Open in IMG/M
3300022190|Ga0181354_1014683All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium2391Open in IMG/M
3300022190|Ga0181354_1113109Not Available877Open in IMG/M
3300022190|Ga0181354_1209026Not Available577Open in IMG/M
3300022752|Ga0214917_10015037All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium6748Open in IMG/M
3300022752|Ga0214917_10019198Not Available5690Open in IMG/M
3300022752|Ga0214917_10019409All Organisms → cellular organisms → Bacteria5651Open in IMG/M
3300022752|Ga0214917_10028756Not Available4240Open in IMG/M
3300023174|Ga0214921_10000448Not Available76758Open in IMG/M
3300023174|Ga0214921_10003014Not Available26485Open in IMG/M
3300023174|Ga0214921_10004461Not Available20579Open in IMG/M
3300023174|Ga0214921_10005036Not Available18945Open in IMG/M
3300023174|Ga0214921_10008347Not Available13452Open in IMG/M
3300023174|Ga0214921_10011626Not Available10660Open in IMG/M
3300023174|Ga0214921_10013722All Organisms → cellular organisms → Bacteria9486Open in IMG/M
3300023174|Ga0214921_10023107Not Available6496Open in IMG/M
3300023174|Ga0214921_10193334Not Available1285Open in IMG/M
3300023174|Ga0214921_10333168Not Available820Open in IMG/M
3300023179|Ga0214923_10002636Not Available23573Open in IMG/M
3300023184|Ga0214919_10006795Not Available15606Open in IMG/M
3300023184|Ga0214919_10026633Not Available6189Open in IMG/M
3300023184|Ga0214919_10057147All Organisms → Viruses → Predicted Viral3654Open in IMG/M
3300027712|Ga0209499_1002704Not Available11198Open in IMG/M
3300027720|Ga0209617_10000027Not Available47296Open in IMG/M
(restricted) 3300027728|Ga0247836_1132261Not Available1118Open in IMG/M
(restricted) 3300027728|Ga0247836_1151049Not Available1003Open in IMG/M
(restricted) 3300027730|Ga0247833_1059740All Organisms → Viruses → Predicted Viral1958Open in IMG/M
3300027747|Ga0209189_1000016Not Available173884Open in IMG/M
3300027754|Ga0209596_1347094Not Available573Open in IMG/M
3300027759|Ga0209296_1065417Not Available1841Open in IMG/M
3300027763|Ga0209088_10000011All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales188747Open in IMG/M
3300027763|Ga0209088_10000013All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales171916Open in IMG/M
3300027763|Ga0209088_10234515Not Available769Open in IMG/M
3300027808|Ga0209354_10306411Not Available631Open in IMG/M
(restricted) 3300027970|Ga0247837_1046553Not Available2660Open in IMG/M
3300027971|Ga0209401_1005171Not Available7930Open in IMG/M
3300027973|Ga0209298_10002773Not Available10795Open in IMG/M
(restricted) 3300027977|Ga0247834_1072017Not Available1687Open in IMG/M
3300028392|Ga0304729_1227025Not Available569Open in IMG/M
(restricted) 3300028569|Ga0247843_1023695All Organisms → Viruses → Predicted Viral4652Open in IMG/M
(restricted) 3300028569|Ga0247843_1154837Not Available934Open in IMG/M
(restricted) 3300029268|Ga0247842_10346120Not Available784Open in IMG/M
(restricted) 3300029286|Ga0247841_10459979Not Available821Open in IMG/M
(restricted) 3300029286|Ga0247841_10649884Not Available645Open in IMG/M
3300031952|Ga0315294_10372608Not Available1346Open in IMG/M
3300032092|Ga0315905_10275166Not Available1625Open in IMG/M
3300033978|Ga0334977_0524802Not Available537Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater32.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake25.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake17.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater8.00%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment4.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater2.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.00%
Freshwater, Surface IceEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice1.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.00%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater1.00%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000736Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300003493Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SNEnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004792Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004810Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300007735Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea ? 2014OctEnvironmentalOpen in IMG/M
3300008119Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NAEnvironmentalOpen in IMG/M
3300008258Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NAEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009187Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaGEnvironmentalOpen in IMG/M
3300010158Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaGEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300012000Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007AEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300012017Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300012666Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2EnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300014819Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011AEnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020498Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300027712Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027720Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027728 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14mEnvironmentalOpen in IMG/M
3300027730 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8mEnvironmentalOpen in IMG/M
3300027747Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027970 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14.5mEnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027977 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12mEnvironmentalOpen in IMG/M
3300028392Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300029268 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19mEnvironmentalOpen in IMG/M
3300029286 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18mEnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300033978Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI12547J11936_101801753300000736Freshwater And SedimentMKKIKKWKKEVTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNSKYFTECGFNWLGWIFEFQWSR*
JGI12547J11936_106151033300000736Freshwater And SedimentMKKKKKRMTSEEFEKAMKAQGRLVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
JGI12547J11936_106782223300000736Freshwater And SedimentMKKKKKRMTSEEFEKTMKAQGRLVSKVYYRITFKGVGLYILNSFQFKLLPNFFYMNGKYFTECGFNWFGWIFEFQWNR*
B570J40625_100006962673300002835FreshwaterMKKQKKRMTSEEFEKAMKAQGRLISKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
JGI25908J49247_1007863913300003277Freshwater LakeMKKIKKWKKEVTSEEFEKEMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWI
JGI25926J51410_100611613300003490Freshwater LakeMKKQKNKMTSEEFEKAMKAQGRLVSKVYYRITFKGVGLYILNSFQFKLLPKFFYMNGKYFTEFGFNWLGWIFEFQWNR*
JGI25923J51411_101050473300003493Freshwater LakeGRLVSKVYYRITFKGVGLYILNSFQFKLLPKFFYMNGKYFTEFGFNWLGWIFEFQWNR*
Ga0066222_123279233300004460MarineKKMKKQKKEMTSEEFEKEMKAQGRFVSKVYYRITFKGVGVYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0007761_1136786823300004792Freshwater LakeLKKMKKQKNKMTSEEFEKAMKAQGRLVSKVYYRITFKGVGLYILNSFQFKLLPKFFYMNGKYFTEFGFNWLGWIFEFQWNR*
Ga0007757_1150712013300004810Freshwater LakeMKKQKNKMTSEEFEKAMKAQGRLVSKVYYRITFKGVGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0049081_1019769423300005581Freshwater LenticMTSEEFEKAMKAQGRLVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0049080_1012744933300005582Freshwater LenticMTSEEFEKAMKAQGRLVSRVYCRFTFKGIGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGW
Ga0104988_10971533300007735FreshwaterMTSEEFEKAMKAQGRLISKVYYRITFKGMGLYILNSFKFKLFPKFFYINGKYFTECGFNWLGWIFEFQWNR*
Ga0114354_112651923300008119Freshwater, PlanktonMTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFDFQWNR*
Ga0114840_1000392353300008258Freshwater, PlanktonMTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0114973_1001890953300009068Freshwater LakeMTSEEFEKEMKAQGCFVSRVYYRITFKGMGLYILNSFKYRLFPKFFYMSGKYFTECGFHWLGWIFEFQWNR*
Ga0114973_1012798813300009068Freshwater LakeMKKKKERMTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0114918_1024145523300009149Deep SubsurfaceMKKQKNKMTSEEFRKEMKAQGRFVSEVYYRITFKGMGLYILNSFKFKLFPKFFCMNSKYYLECGVNWLGWILEFQWNK*
Ga0114962_1050877923300009151Freshwater LakeMKKKKKRMTSEEFEKTMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFHWLGWIFEFQWNR*
Ga0114980_10008172103300009152Freshwater LakeMTSEEFEKAMKAEGRLISKVCYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0114963_1014544923300009154Freshwater LakeMTSEEFEKTMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFHWLGWIFEFQWNR*
Ga0114963_1014593323300009154Freshwater LakeMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMSGKYFTECGFHWLGWIFEFQWNR*
Ga0114968_10011714233300009155Freshwater LakeMKKIKKWKKEVTSEEFEKEMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0114978_1043430223300009159Freshwater LakeMKKKKKRMTSEEFEKAMKAQGRLVSKVYYRITFKGVGLYILNSFKFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0114981_1058207423300009160Freshwater LakeMKKKKKRMTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0114979_1019561133300009180Freshwater LakeMTSEEFEKDMKAQGCFVSKVYYRITFKGMGLYILNSFKFRLFPKFFYMNGKYFTECGFHWLSWIFEFQWNR*
Ga0114974_1068254723300009183Freshwater LakeMKKKKKRMTSEEFEKAMKAQGRFISKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0114972_1005059493300009187Freshwater LakeMTSEEFEKEMKAQGCFVSRVYYRITFKGMGLYILNSFKYRLFPKFFYMSGKYFTECGFHWLGWIFE
Ga0114960_1008972133300010158Freshwater LakeMKKKKKRMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMSGKYFTECGFHWLGWIFEFQWNR*
Ga0133913_1034664533300010885Freshwater LakeMTSEEFEKEMKAQGRFVSKVYYRITFKGVGVYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0133913_1332282933300010885Freshwater LakeMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFKFRLFPKFFYMNGKYFTECGFHWLSWIFEFQWNR*
Ga0139557_100502933300011010FreshwaterMTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTEFGFNWLGWIFEFQWNR*
Ga0119951_113938233300012000FreshwaterMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0153805_100481013300012013Surface IceMTSEEFEKAMKAQGRLVSRVYCRFTFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0153801_1001525123300012017FreshwaterMKKKKKRMTSEEFEKAMKAQGRLVSKVYYRITFKGVGLYILNSFQFKLLPNFFYMNGKYFTECGFNWFGWIFEFQWNR*
Ga0157498_100172083300012666Freshwater, Surface IceMTSEEFEKAMKAQGRLVSKVYYRITFKGVGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0164294_10011271253300013006FreshwaterMTSEEFEKAMKAQGRLVSKVYYRITFKGMGLYILNSFKFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0164294_1027232933300013006FreshwaterMTSEEFEKAMKAQGRLVSKVYYRITFKGMGLYILNSFQFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0164294_1117842623300013006FreshwaterMKKIKKSKKEVTSEEFEKEMKAQGRFVSKVYYRLIYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIF
Ga0177922_1007237233300013372FreshwaterMTSEEFEKTMKAQGRLVSKVYYRITFKGVGLYILNSFQFKLLPNFFYMNGKYFTECGFNWFGWIFEFQWNR*
Ga0177922_1019395123300013372FreshwaterMTSEEFEKAMKAQGRLISKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0119952_106017623300014050FreshwaterMKKKKKRMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0119954_100832433300014819FreshwaterMTSEEFEKEMKAQGRFVSKVYYRIRFKGMGLYILNSFKFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR*
Ga0181364_103654323300017701Freshwater LakeMKKKKERMTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFKFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0181364_104887033300017701Freshwater LakeMKKKKKRMTSEEFEKAMKAQGRLVSRVYCRFTFKGIGLYILNSFQFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0181358_115080613300017774Freshwater LakeMKKKKKRMTSEEFEKAMKAQGRLVSRVYCRFTFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0181358_121684033300017774Freshwater LakeMTSEEFEKAMKAQGRLVSRVYCRFTFKGIGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0181355_114104533300017785Freshwater LakeMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0181359_100232893300019784Freshwater LakeMKKIKKWKKEVTSEEFEKAMKAQGRLVSKVYYRIRYKDMGLYILNSFKFKLFPKFFYMNGKYFTECGLNWLGWIFEFQWNR
Ga0181359_101701043300019784Freshwater LakeMKKQKNKMTSEEFEKAMKAQGRLVSKVYYRITFKGVGLYILNSFQFKLLPKFFYMNGKYFTEFGFNWLGWIFEFQWNR
Ga0181359_126490523300019784Freshwater LakeMTSEEFEKAMKAQGRLISKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0211731_1052619633300020205FreshwaterMKKQKKKMTSEEFEKAMKAQGRLISKVYYRITFKGMGLYILNSFKFKLFPKFFCMNSKYYVECGVNWLGWILEFQWNK
Ga0208050_102606633300020498FreshwaterLKKMKKQKKRMTSEEFEKAMKAQGRLISKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0222713_1054308813300021962Estuarine WaterMTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0181354_101468333300022190Freshwater LakeMKKKKERMTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0181354_111310923300022190Freshwater LakeMKKKKKRMTSEEFEKAMKAQGRLVSKVYYRITFKGMGLYILNSFKFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0181354_120902613300022190Freshwater LakeKKKKKRMTSEEFEKAMKAQGRLVSRVYCRFTFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214917_10015037193300022752FreshwaterMTSEEFEKAMKAQGRLVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214917_10019198143300022752FreshwaterMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMSGKYFTECGFHWLGWIFEFQWNR
Ga0214917_1001940963300022752FreshwaterMKNRKKKMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMSGKYFTECGFHWLGWIFEFQWNR
Ga0214917_10028756123300022752FreshwaterMKKKKKRMTSEEFEKTMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMSGKYFTECGFHWLGWIFEFQWNR
Ga0214921_10000448133300023174FreshwaterMKKKKERMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMSGKYFTECGFHWLGWIFEFQWNR
Ga0214921_10003014713300023174FreshwaterMKKKKKRMTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214921_10004461263300023174FreshwaterMKKQKNKMTSEEFEKAMKDQGRLVSRVYCRFTFKGMGLYILNSFKFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214921_10005036133300023174FreshwaterMKKQKNKMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMSGKYFTECGFHWLGWIFEFQWNR
Ga0214921_10008347343300023174FreshwaterMKKIKKWKKEVTSEEFEKEMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214921_10011626123300023174FreshwaterMKKIKKWKKEVTSEEFEKEMKAQGRLVSKVYYRITFKGMGLYILNSFKFKLFPKFFYMNSKYFTECGFNWLGWIFEFQWNR
Ga0214921_10013722263300023174FreshwaterMKKQKKKMTSEEFEKAMKAQGRLVSKVYYRITFKGMGIYILNSFKFKLFPKFFCMNTKYYIECGVNWLGWILEFQWNK
Ga0214921_10023107133300023174FreshwaterMKNRKKKMTSEEFEKAMKAQGRLVSKVYYRVTFKGMGLYILNSFKFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214921_1019333453300023174FreshwaterMKKKKKRMTSEQFEKAMKAQGRLVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214921_1033316823300023174FreshwaterMKKKKKRMTSEEFEKAMKSQGRLVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214923_10002636473300023179FreshwaterMTSEQYEKWANENDIFISKVYYRITFKGMGLYILNSFKFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214919_10006795393300023184FreshwaterMKKKKKRMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMSGKYFTECGFHWLGWIFEFQWNR
Ga0214919_10026633133300023184FreshwaterMTSEEFEKVMKAQGRLISKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0214919_1005714763300023184FreshwaterMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFKFRLFPKFFYMNGKYFTECGFHWLGWIFEFQWNR
Ga0209499_1002704183300027712Freshwater LakeMKKKKKRMTSEEFEKTMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFHWLGWIFEFQWNR
Ga0209617_10000027203300027720Freshwater And SedimentMKKIKKWKKEVTSEEFEKAMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNSKYFTECGFNWLGWIFEFQWSR
(restricted) Ga0247836_113226133300027728FreshwaterMTSEEFEKTMKAQDRLISKVYYRIRYKDMGLYILNSFKFKLFPNFFCMNSKYHLECGVNWLGWILEFQWNK
(restricted) Ga0247836_115104943300027728FreshwaterMTSEEFEKTMKAQDKLISKVYYRIRYKDMGLYILNSFKFKLFPNFFCMNSKYHLECGVNWLGWILEFQWNK
(restricted) Ga0247833_105974053300027730FreshwaterMKKQKNKMTSEEFEKTMKAQDRLISKVYYRIRYKDMGLYILNSFKFKLFPNFFCMNSKYHLECGVNWLGWILEFQWNK
Ga0209189_10000162123300027747Freshwater LakeMTSEEFEKTMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFHWLGWIFEFQWNR
Ga0209596_134709423300027754Freshwater LakeSEEFEKEMKAQGCFVSRVYYRITFKGMGLYILNSFKYRLFPKFFYMSGKYFTECGFHWLGWIFEFQWNR
Ga0209296_106541753300027759Freshwater LakeMTSEEFEKAMKAEGRLISKVCYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0209088_10000011583300027763Freshwater LakeMKKIKKRKKEVTSEEFEKEMKAQGRFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0209088_100000131123300027763Freshwater LakeMTSEEFEKAMKAQGRLVSKVYYRITFKGVGLYILNSFKFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0209088_1023451523300027763Freshwater LakeMTSEEFEKDMKAQGCFVSKVYYRITFKGMGLYILNSFKFRLFPKFFYMNGKYFTECGFHWLSWIFEFQWNR
Ga0209354_1030641113300027808Freshwater LakeMKKIKKWKKEVTSEEFEKEMKAQGRFVSKVYYRIRYKDMGLYILNSFQFKLLPKFFYMNGKYFTEC
(restricted) Ga0247837_104655373300027970FreshwaterMKKQKNKMTSEEFEKTMKAQDKLISKVYYRIRYKDMGLYILNSFKFKLFPKFFCMNSKYHLECGVNWLGWILEFQWNK
Ga0209401_1005171153300027971Freshwater LakeMKKKKKKMTSEEFEKEMKAQGCFVSRVYYRITFKGMGLYILNSFKYRLFPKFFYMSGKYFTECGFHWLGWIFEFQWNR
Ga0209298_10002773123300027973Freshwater LakeMKKQKNKMTSEEFEKAMKAEGRLISKVCYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
(restricted) Ga0247834_107201733300027977FreshwaterMTSEEFEKTMKAQDKLISKVYYRIRYKDMGLYILNSFKFKLFPKFFCMNSKYHLECGVNWLGWILEFQWNK
Ga0304729_122702513300028392Freshwater LakeMTSEEFEKAMKAQGCFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMSGKYFTECGFHWLGW
(restricted) Ga0247843_102369593300028569FreshwaterMKKQKNKMTSEEFEKTMKAQDRLISKVYYRIRYKDMGLYILNSFKFKLFPKFFCMNSKYHLECGVNWLGWILEFQWNK
(restricted) Ga0247843_115483733300028569FreshwaterEEFEKTMKAQDRLISKVYYRIRYKDMGLYILNSFKFKLFPNFFCMNSKYHLECGVNWLGWILEFQWNK
(restricted) Ga0247842_1034612033300029268FreshwaterEEFEKTMKAQDKLISKVYYRIRYKDMGLYILNSFKFKLFPKFFCMNSKYHLECGVNWLGWILEFQWNK
(restricted) Ga0247841_1045997943300029286FreshwaterKMTSEEFKKTMKAQDRLISKVYYRIRYKDMGLYILNSFKFKLFPNFFCMNSKYHLECGVNWLGWILEFQWNK
(restricted) Ga0247841_1064988413300029286FreshwaterKKMKKQKNKMTSEEFEKTMKAQDRLISKVYYRIRYKDMGLYILNSFKFKLFPNFFCMNSKYHLECGVNWLGWILEFQWNK
Ga0315294_1037260823300031952SedimentMKKIKKWKKEVTSEEFEKEMKAQGRFVSKVYYRITFKGMGLYILNSFQFKLFPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0315905_1027516653300032092FreshwaterMTSEEFEKAMKAQGRFVSKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR
Ga0334977_0524802_297_5333300033978FreshwaterMKKKKKRMTSEEFEKAMKAQGRLISKVYYRITFKGMGLYILNSFQFKLLPKFFYMNGKYFTECGFNWLGWIFEFQWNR


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