NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104383

Metagenome Family F104383

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104383
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 106 residues
Representative Sequence MSGVAVGEGLEGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Number of Associated Samples 91
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.00 %
% of genes near scaffold ends (potentially truncated) 49.00 %
% of genes from short scaffolds (< 2000 bps) 79.00 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(32.000 % of family members)
Environment Ontology (ENVO) Unclassified
(35.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 1.87%    β-sheet: 6.54%    Coil/Unstructured: 91.59%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13649Methyltransf_25 21.00
PF12973Cupin_7 14.00
PF00248Aldo_ket_red 10.00
PF08241Methyltransf_11 8.00
PF05960DUF885 5.00
PF14499DUF4437 3.00
PF07617DUF1579 2.00
PF01209Ubie_methyltran 2.00
PF07883Cupin_2 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG4805Uncharacterized conserved protein, DUF885 familyFunction unknown [S] 5.00
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 2.00
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 2.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2032320005|FACEOR_FY84VJD01D4V1HAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
2088090014|GPIPI_16709962All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1062Open in IMG/M
3300000559|F14TC_102527920All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300005171|Ga0066677_10098397All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1545Open in IMG/M
3300005171|Ga0066677_10423734All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium761Open in IMG/M
3300005175|Ga0066673_10163492All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1247Open in IMG/M
3300005177|Ga0066690_10396696All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium936Open in IMG/M
3300005177|Ga0066690_10796566All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium615Open in IMG/M
3300005179|Ga0066684_10081899All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1937Open in IMG/M
3300005181|Ga0066678_10206063All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1257Open in IMG/M
3300005184|Ga0066671_10998382All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium526Open in IMG/M
3300005187|Ga0066675_11206116All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium561Open in IMG/M
3300005290|Ga0065712_10797032All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium513Open in IMG/M
3300005293|Ga0065715_10038531All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1092Open in IMG/M
3300005294|Ga0065705_10739449All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium635Open in IMG/M
3300005331|Ga0070670_100137146All Organisms → cellular organisms → Bacteria2115Open in IMG/M
3300005434|Ga0070709_10483972All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium937Open in IMG/M
3300005435|Ga0070714_101362933All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium692Open in IMG/M
3300005454|Ga0066687_10491052All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium725Open in IMG/M
3300005455|Ga0070663_101311876All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium639Open in IMG/M
3300005536|Ga0070697_100206832All Organisms → cellular organisms → Bacteria → Proteobacteria1670Open in IMG/M
3300005543|Ga0070672_101377437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium631Open in IMG/M
3300005560|Ga0066670_10092953All Organisms → cellular organisms → Bacteria1672Open in IMG/M
3300005561|Ga0066699_10166582All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1515Open in IMG/M
3300005561|Ga0066699_10301150All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1141Open in IMG/M
3300005574|Ga0066694_10327859All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium728Open in IMG/M
3300005587|Ga0066654_10072787All Organisms → cellular organisms → Bacteria1588Open in IMG/M
3300005598|Ga0066706_10516997All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium950Open in IMG/M
3300005841|Ga0068863_100201439All Organisms → cellular organisms → Bacteria1915Open in IMG/M
3300006028|Ga0070717_10150460All Organisms → cellular organisms → Bacteria2013Open in IMG/M
3300009012|Ga0066710_103084756All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium645Open in IMG/M
3300009137|Ga0066709_104465440All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium511Open in IMG/M
3300010303|Ga0134082_10039938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1785Open in IMG/M
3300010321|Ga0134067_10466866All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium517Open in IMG/M
3300010335|Ga0134063_10063579All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1631Open in IMG/M
3300012202|Ga0137363_10179799All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1683Open in IMG/M
3300012927|Ga0137416_10087906All Organisms → cellular organisms → Bacteria2305Open in IMG/M
3300012930|Ga0137407_10084319All Organisms → cellular organisms → Bacteria2686Open in IMG/M
3300012958|Ga0164299_10258322All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1046Open in IMG/M
3300012958|Ga0164299_11479508All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium529Open in IMG/M
3300012960|Ga0164301_10627757All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium797Open in IMG/M
3300012960|Ga0164301_11342286All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium582Open in IMG/M
3300012975|Ga0134110_10170802All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium904Open in IMG/M
3300012985|Ga0164308_12019220All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium538Open in IMG/M
3300012987|Ga0164307_10376138All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1039Open in IMG/M
3300012988|Ga0164306_10521720All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium917Open in IMG/M
3300012989|Ga0164305_11365035All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium622Open in IMG/M
3300013296|Ga0157374_10328280All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1517Open in IMG/M
3300013306|Ga0163162_10803978All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1058Open in IMG/M
3300014150|Ga0134081_10153207All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium758Open in IMG/M
3300014326|Ga0157380_10950945All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium889Open in IMG/M
3300018000|Ga0184604_10000167All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus5707Open in IMG/M
3300018027|Ga0184605_10022798All Organisms → cellular organisms → Bacteria2531Open in IMG/M
3300018027|Ga0184605_10030981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2204Open in IMG/M
3300018027|Ga0184605_10431033All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium584Open in IMG/M
3300018051|Ga0184620_10024290All Organisms → cellular organisms → Bacteria1539Open in IMG/M
3300018066|Ga0184617_1022175All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1425Open in IMG/M
3300018071|Ga0184618_10022051All Organisms → cellular organisms → Bacteria → Proteobacteria2099Open in IMG/M
3300018433|Ga0066667_10273524All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300018482|Ga0066669_10261331All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1377Open in IMG/M
3300019789|Ga0137408_1122064All Organisms → cellular organisms → Bacteria3562Open in IMG/M
3300019868|Ga0193720_1011946All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1209Open in IMG/M
3300019869|Ga0193705_1052712All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium836Open in IMG/M
3300019872|Ga0193754_1020086All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium718Open in IMG/M
3300019873|Ga0193700_1006251All Organisms → cellular organisms → Bacteria1851Open in IMG/M
3300019878|Ga0193715_1000805All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus7317Open in IMG/M
3300019878|Ga0193715_1002140All Organisms → cellular organisms → Bacteria4383Open in IMG/M
3300019882|Ga0193713_1080255All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium918Open in IMG/M
3300019886|Ga0193727_1017130All Organisms → cellular organisms → Bacteria2655Open in IMG/M
3300019890|Ga0193728_1025152All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2970Open in IMG/M
3300019996|Ga0193693_1024328All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1103Open in IMG/M
3300020004|Ga0193755_1116131All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium837Open in IMG/M
3300020004|Ga0193755_1211020All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium547Open in IMG/M
3300020006|Ga0193735_1058140All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1136Open in IMG/M
3300020008|Ga0193757_1002910All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300020010|Ga0193749_1005271All Organisms → cellular organisms → Bacteria2497Open in IMG/M
3300020059|Ga0193745_1017711All Organisms → cellular organisms → Bacteria1548Open in IMG/M
3300020062|Ga0193724_1042869All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium961Open in IMG/M
3300021178|Ga0210408_10038566All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus3758Open in IMG/M
3300021432|Ga0210384_10054910All Organisms → cellular organisms → Bacteria3608Open in IMG/M
3300021478|Ga0210402_10901486All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium811Open in IMG/M
3300024288|Ga0179589_10010281All Organisms → cellular organisms → Bacteria → Proteobacteria2762Open in IMG/M
3300025939|Ga0207665_10117805All Organisms → cellular organisms → Bacteria → Proteobacteria1873Open in IMG/M
3300025972|Ga0207668_10194626All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1610Open in IMG/M
3300026088|Ga0207641_10127703All Organisms → cellular organisms → Bacteria → Proteobacteria2279Open in IMG/M
3300026300|Ga0209027_1008655All Organisms → cellular organisms → Bacteria → Proteobacteria3837Open in IMG/M
3300026309|Ga0209055_1188838All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300026310|Ga0209239_1325131All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium534Open in IMG/M
3300027903|Ga0209488_10013757All Organisms → cellular organisms → Bacteria → Proteobacteria5906Open in IMG/M
3300028713|Ga0307303_10036303All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1007Open in IMG/M
3300028718|Ga0307307_10136145All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium763Open in IMG/M
3300028778|Ga0307288_10110057All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1011Open in IMG/M
3300028784|Ga0307282_10093459All Organisms → cellular organisms → Bacteria → Proteobacteria1389Open in IMG/M
3300028791|Ga0307290_10160026All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium825Open in IMG/M
3300028793|Ga0307299_10036210All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1803Open in IMG/M
3300028799|Ga0307284_10022436All Organisms → cellular organisms → Bacteria → Proteobacteria2038Open in IMG/M
3300031057|Ga0170834_101153873All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1345Open in IMG/M
3300031128|Ga0170823_16361089All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1404Open in IMG/M
3300031474|Ga0170818_108253201All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1631Open in IMG/M
3300032205|Ga0307472_100595153All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium975Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil32.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2032320005Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-EnvironmentalOpen in IMG/M
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019868Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019872Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300019996Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020008Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACEORA_32609802032320005SoilMSGVAVGEGLEGNRDASEGGLSFSEDGTCINKSKESLAGVRDGVGTGEMASLGRDWAALFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMI
GPIPI_025108702088090014SoilVSGVPVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGCGFVAVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
F14TC_10252792013300000559SoilMSGVAVGEGLECGEDASVDGFSRNEDGACINESKESLAGVGGGVGVGEVAFSRAGVDCAFFGVASMSAEGACCSGMPICPLFFGSA
Ga0066677_1009839723300005171SoilMSGVAVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLRSSFFGSAAAEASSNLPCTIIPDSLLETL*
Ga0066677_1042373413300005171SoilGDNCTDMSGVAVGEGLEGNGDASAGGFRFNEDGTCINESSESLAGVGDGVGVAEVVFSCVGVGCDFFGVASTLEGSRRSEMSVRPFFFGSALAGTSSNLPCTIIPDLLLETM*
Ga0066673_1016349223300005175SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGERAFSWAGPGCVFFGVASMRAEGPCSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0066690_1039669623300005177SoilGDGDEAGDNCTDMSGVAVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLRSSFFGSAAAEASSNLPCTIIPDSLLETL
Ga0066690_1079656623300005177SoilMSGVAVGEGLEGNGDAPAGGFSFNEDGTCINESKESLAGVGDVGVGVGEVAFSCAGVGCGFVAVASM*VEDALDRRSEISVRSFFFGSAAADASSNLPCTIIPDSLLET
Ga0066684_1008189933300005179SoilMSGVAVGEGPAGDGDAPVGGFSFNEDGTCINESKESLAGVGDGLTVGEVICSDAGLGCDFSGFVEDSA*AEGALGRCLEMLVGSFFFDSALAGASSNLPCTIIPDTWLETT*
Ga0066678_1020606323300005181SoilMSGVAVGEGLEGNGDASAGGFRFNEDGTCINESSESLAGVGDGVGVAEVVFSCVGVGCDFFGVASTLEGSRRSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0066671_1099838213300005184SoilTDMSGVAVGEGLEGNGDASAGGFSFNEDGTCINESSESLAGVGDGVGVAEVVFSCVGVGCDFFGVASTLEGSRRSEMSVRPFFFGSALAGTSSNLPCTIIPDLLLETM*
Ga0066675_1120611613300005187SoilMSGVAVGEGPAGDGDAPVGGFSFNEDGTCINESKESLAGVGDGLTVGEVICSDAGLGCDFSGFVEDSA*AEGALGRCLEMLVRSFFFDSAPAGASSNLPCTIVPDTW
Ga0065712_1079703213300005290Miscanthus RhizosphereMSGVAVGEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIP
Ga0065715_1003853123300005293Miscanthus RhizosphereMSGVAVGEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTIIPDSRLVTM*
Ga0065705_1073944913300005294Switchgrass RhizosphereVSGVPVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGCCFVAVASMREGACSSEMSVRPFFFGSALAGACSNLPCT
Ga0070670_10013714623300005331Switchgrass RhizosphereMSGVAVGVGLEGNGDALAGGFSFNEDGTCINEFKESLAGVRVGVGAGEMAFSWAGLGCAFFGVASLGAVGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0070709_1048397223300005434Corn, Switchgrass And Miscanthus RhizosphereMSGVAVGEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAG
Ga0070714_10136293323300005435Agricultural SoilMFVFHATRLPHECARAS*N*LLVSDLSYCGDGDGDEAGDNCTDTSGVAVGEGLEGNGDASEGGLSFSEDGTRINESKESLAEVRDGVGAGEMAFSWAGLGCAFFGVASIRAEDACSSEMSVRPFFFGSALAG
Ga0066687_1049105213300005454SoilEAGDS*GDVSGVAIGEGIEGDGEAPAGGFSFNDDGTCINESKESLAGVRDGVGVDEVAFSCAGLGCGFVAAAST*EDVRCSEISLRSFFFGSAAAGASSNLPCTIIPD*RLEGM*
Ga0070663_10131187623300005455Corn RhizosphereMSGVAVGEGLEGNGDALAGGFSFNEDGTCINEFKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASLGAVGACSSEMSVRPFFFG
Ga0070697_10020683223300005536Corn, Switchgrass And Miscanthus RhizosphereMSGVAVGEGLEGNGDASAGGFSFNEDGTCINEFKESLAGVRVGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALADACSNLPCTMIPDSRLVTM*
Ga0070672_10137743713300005543Miscanthus RhizosphereMSGVAVGEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCT
Ga0066670_1009295313300005560SoilSGVAVGEGLEGNGDASAGGFSFNEDGTCINESSESLAGVGDGVGVAEVVFSCVGVGCDFFGVASTLEGSRRSEMSVRPFFFGSALAGTSSNLPCTIIPDLLLETM*
Ga0066699_1016658223300005561SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGERAFTWAGPGCVFFGVASMRAEGPCSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0066699_1030115013300005561SoilDNCTDMSGVAVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLRSSFFGSAAAEASSNLPCTIIPDSLLETL*
Ga0066694_1032785913300005574SoilAGDGAGASCSDISGVAVGEGLECGGDVAAGGFSFNEDGGCINESKESLAGVGDGVGAGEVAFSCAGVGCVFFGVASMRAEGACCSEMSVCPLFFGSALAGASSNLPCTIIPASRLITM*
Ga0066654_1007278733300005587SoilMSGVAVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLRSSFFGSAAAEASSNLPCTIIPDSLLET
Ga0066706_1051699713300005598SoilNCTDMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGERAFSWAGLGCVFFGVASMRAEGPCSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0068863_10020143933300005841Switchgrass RhizosphereGDNCTDMSGVAVGEGLEGNGDASEGGLSFSEDGTRINEFKESLAEVRDGVGAGEMAFSWAGLGCAFFGVASIRAEDACSSEMSVRPFFFGSALAGPCSNLPCTMIPDSRLVTM*
Ga0070717_1015046013300006028Corn, Switchgrass And Miscanthus RhizosphereMSGVAVGEGLEGNGDALAGGFSFNEDGTCINEFKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASLGAVGACSSEMFVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0066710_10308475613300009012Grasslands SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLRSSFFGSAAAEASSNLPCTIIPDSLLETL
Ga0066709_10446544013300009137Grasslands SoilDTSGVAVGEGLEGNGDASAGGLRFNEDGTCINESSESLAGVGDGVGVAEVVFSCVGVGCDFFGVASTLEGSRRSEMSVRPFFFGSALAGTSSNLPCTIIPDLLLETM*
Ga0134082_1003993823300010303Grasslands SoilMSGVAVGEGLEGNGDASAGGFRFNEDGTCINESSESLAGVGDGVGVAEVVFSCVGVGCDFFGVASTLEGSRRSEMSVRPFFFGSALAGTSSNLPCTIIPDLLLETM*
Ga0134067_1046686613300010321Grasslands SoilMSGVAVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSELYLRSSFFGSDAAEASSNLPCTIIPDSLLETL*
Ga0134063_1006357913300010335Grasslands SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGERAFSWAGPGCVFFGVASVRAEGPCSSEMSVRPFFFGSALAGTSSNLPCTIIPDLRL
Ga0137363_1017979923300012202Vadose Zone SoilVSGVPVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALERCSEMSLPSFFFGSAVAENSSNLPCTIIPDSLLETL*
Ga0137416_1008790633300012927Vadose Zone SoilLVSDLSYCGDGDGDEAGDNCTDMSGAAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0137407_1008431933300012930Vadose Zone SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGEMAFSWAALGCAFFGVASMRAEGPCSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0164299_1025832223300012958SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGEMAFCWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0164299_1147950813300012958SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESNESLAGVGDGVGVGEVAFSCAVLGCDFVAVASVREVAPDRCSEMSLRSFFFGSVAADGASNLPCTIIPDSLLETA*
Ga0164301_1062775713300012960SoilGDNCTDMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLLTM*
Ga0164301_1134228613300012960SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESNESLAGVGDGVGVGEVAFPCAGLGCDFVAVASVREVAPDRCSEMSLRSFFFGSVAADGSSNLLCTIIPDSLLETA*
Ga0134110_1017080223300012975Grasslands SoilMSGVAVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSKMSLRSFFFGSAAADASSNLPCTIIPDSLLETA*
Ga0164308_1201922013300012985SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFF
Ga0164307_1037613813300012987SoilMSGVAVDEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLLTM*
Ga0164306_1052172023300012988SoilMSGVAVGEGLEGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRSEGACSNLPCTMIPDS
Ga0164305_1136503513300012989SoilGVAVGEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRSEGACSNLPCTMIPDSRLVTM*
Ga0157374_1032828023300013296Miscanthus RhizosphereMSGVAVGVGLEGNGDALAGGFSFNEDGTCINEFKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASLGAVGACSSEMFVRPFFFGSALAGACSNLPCTMIPDSRLVTM*
Ga0163162_1080397823300013306Switchgrass RhizosphereMSGVAVGEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDGVGPGEMAFSRAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTIIPDSRLVTM*
Ga0134081_1015320713300014150Grasslands SoilMSGVAVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLRSSFFGSAAAEAS
Ga0157380_1095094523300014326Switchgrass RhizosphereMSGVAVGEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALADACSNLPCT
Ga0184604_1000016743300018000Groundwater SedimentMSGVAVGEGLAGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGRGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0184605_1002279823300018027Groundwater SedimentMSGVALGEGVAGNGDVPAGGFSFSDDGTCINESKEWLAGVGDGVTVAEVAFSGAGVGRGFFGVASAREEGAFLRCSETRVRSFFFGSASAGASSNLPCTIIPETRLETV
Ga0184605_1003098123300018027Groundwater SedimentMSGVAVGEGLAGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASVRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0184605_1043103323300018027Groundwater SedimentMSGVALGGGLEGSGDVPAGGFSFNEDGTCISESKESLAGVDDVVGDGVGVGEVAFSCAGVDRGFFGVASMSAEGACCSAMPICPLFFGSAPADAFS
Ga0184620_1002429013300018051Groundwater SedimentMSGVAVGEGLEGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMALSWAGRGCAFFGVASMRAEGASSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0184617_102217513300018066Groundwater SedimentMSGVAVGQGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMVFSWARLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0184618_1002205143300018071Groundwater SedimentMSGVAVGEGLAGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMACSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSR
Ga0066667_1027352423300018433Grasslands SoilMSGVAVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLRSSFFGSAAAEASSNLPCTIIPDSLLETL
Ga0066669_1026133123300018482Grasslands SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGESAFSWAGPGCVFFGVASVRAEGPCSSEMSVRPFFFGSALAGARSNLPCTMIPDSRLVTM
Ga0137408_112206423300019789Vadose Zone SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGEMAFSWAALGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193720_101194623300019868SoilMSGVAVGEGLAGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGEMVFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193705_105271213300019869SoilDLSYCGDGDGDEAGDNCTDMSGVAVGEGLAGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMALSWAGRGCAFFGVASMRAEGASSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193754_102008623300019872SoilMSGVAVGGGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGEMAFSWAGLSCAFFGVASLGAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193700_100625113300019873SoilVSDLSYCGDGDGDEAGDNCTDMSGVAVGEGLEGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGRGCAFFGVASMRAVGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193715_100080573300019878SoilVSGIAVGEGLEGNGEALEGELNFNEDGTRINESKESLAGLGVGEVTCSCAGRGCGFVAVASVRVEGALDCCSELSLRFFFFGSAAADASSNLPCTIIPDSRLETV
Ga0193715_100214053300019878SoilMSGVAVGEGLAGNGDASAGGFSFNEDGTRINESKESLDGVGDGVGAGEVGFSCAGLGCAFFGVASVRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193713_108025523300019882SoilEGDVSGVPVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLPSFFFGSAVAENSSNLPCTIIPDSLLETL
Ga0193727_101713013300019886SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLDGVGDGVGAGEVAFSCAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLP
Ga0193728_102515213300019890SoilMSGVALGEGVAGNGDVPAGGFSFSDDGTCINESKESLAGVGDGVTVAEVAFSGAGVGRGFFGVASAREEGAFLRCSETRVRSFFFGSASAGASSNLPCTIIPETRLETE
Ga0193693_102432813300019996SoilMSGVAVGEGLEGNGDASEGGLSFSEDGTCINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193755_111613113300020004SoilMSGVAVGEGLEGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193755_121102013300020004SoilVSGVPVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLPSFFFGSAVAENSSNLPCTIIPDSLLETL
Ga0193735_105814023300020006SoilDMSGVAVGEGLEGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMACSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193757_100291033300020008SoilDASAGGFSFNEDGTRINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193749_100527133300020010SoilMSGVAVGEGLAGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGACEMAFSWAGLGCAFFGVASMRAEGASSPEMSVPPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0193745_101771133300020059SoilVSGVPVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGCGFVAVASMRAEGACSSEMSVRPFFFGSALAGACSNLP
Ga0193724_104286913300020062SoilMEPENFVCSSFTRLGCRTSAQGRVELTSSSDLSYCGDGDGDEAGDNCTDMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGIRDGVGAGEMVFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0210408_1003856653300021178SoilMSGVAVGEGLEGDGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRGEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0210384_1005491033300021432SoilMSGVAVGEGLEGDGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVCPFFFDSALAGACSNLPCTMIPDSRLVTM
Ga0210402_1090148613300021478SoilSYCGDGDGDEAGDNCTDMSGVAVGEGLEGDGDASEGGLSFSEDGTCINESKESLAGVRDRVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVCPFFFDSALAGACSNLPCTMIPDSRLVTM
Ga0179589_1001028123300024288Vadose Zone SoilMSGVAVGEGLEGNGEASEGGLSFSEDGTCINESRESLGGVRDGVGAGEMAFSSAGLGCAFLGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0207665_1011780513300025939Corn, Switchgrass And Miscanthus RhizosphereDLSYCGDVDGDEAGDNCTDTSGVAVGEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0207668_1019462613300025972Switchgrass RhizosphereMSGVAVGEGLEGNRDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMFVRPFFFGSALAGPCSNLPCTMIPDSRLVTM
Ga0207641_1012770313300026088Switchgrass RhizosphereVAVGEGLEGNGDASEGGLSFSEDGTRINEFKESLAEVRDGVGAGEMAFSWAGLGCAFFGVASIRAEDACSSEMSVRPFFFGSALAGPCSNLPCTMIPDSRLVTM
Ga0209027_100865523300026300Grasslands SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLAGVRDGVGAGERAFSWAGPGCVFFGVASMRAEGPCSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0209055_118883823300026309SoilVEIAGDGAGAGCSDISGVAVGEELECGGDVSAGGFSFNEDGGCINESKELLAGVGDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFF
Ga0209239_132513113300026310Grasslands SoilMSGVAVGEGLEGNGEALVGGFSFNEDGTRINESKESLAGVGNGVGVGEVAFSCAGLGGFVAVASVRVEGALDRCSEMSLRSSFFGSAAAEASSNLPCTIIPDSLLETA
Ga0209488_1001375753300027903Vadose Zone SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLDGVGDGVGAGEVGFSCAGLGCAFLGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0307303_1003630313300028713SoilGLAGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVKM
Ga0307307_1013614513300028718SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESKESLDGVGDGVGAGEVAFSCAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGVCSNLPCTMIPDSRLVTM
Ga0307288_1011005713300028778SoilMSGVAVGEGLAGNGDASAGGFSFNEDGTRINEPKESLDGVGDGVGAGEVAFSCALGCAFFGVASMGAEGACYSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0307282_1009345923300028784SoilMSGVAVGEGLAGNGDASAGGFSFNEDGTRINESKESLDGVGDGVGAGEVGFSCAGLGCAFFGVASMRAVGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTMYCR
Ga0307290_1016002623300028791SoilMSGVAVGEGLAGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMALSWAGRGCAFFGVASMRAEGASSSEMSVRPFFFGSA
Ga0307299_1003621013300028793SoilMSGVAVGEGLAGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGACEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0307284_1002243613300028799SoilSYCGDGDGDEAGDNCTDMSGVAVGEGLAGNGDASEGGLSFSEDGTCINESKESLAGVRDGVGAGEMALSWAGRGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNLPCTMIPDSRLVTM
Ga0170834_10115387313300031057Forest SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESNESLAGVGDGVGVGEVAFSCVGLGGDFVAVASVREVAPDSCSEMSLRSFFFGSVAADGSSNLPCTIIPDS
Ga0170823_1636108913300031128Forest SoilMSGVAVGEGLEGNGDASAGGFSFNEDGTRINESNESLAGVGDGVGVGEVALSCAGLGCDFVAVASVREVAPDSCSEMSLRSFFFGSVAADGSSNLPCTIIPDSLLETA
Ga0170818_10825320113300031474Forest SoilMSGVAVGEGLEGNGDASEGGLSFSEDGTCINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALVGACSNLPCTMIPDSRLVTM
Ga0307472_10059515313300032205Hardwood Forest SoilMSGVAVGEGFEGNRDASEGGLSFSEDGTCINESKESLAGVRDRVGTGEMAFSWAGLGCAFFGVASMRAEGACSSEMSVRPFFFGSALAGACSNL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.