NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104332

Metagenome / Metatranscriptome Family F104332

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104332
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 75 residues
Representative Sequence PFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAAGVSINPITGDSGADRLVPSEPLDTQLRKSWT
Number of Associated Samples 69
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(74.000 % of family members)
Environment Ontology (ENVO) Unclassified
(90.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(81.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 23.81%    β-sheet: 0.00%    Coil/Unstructured: 76.19%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF04195Transposase_28 2.00
PF00665rve 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 1.00
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 1.00
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 1.00
COG4584TransposaseMobilome: prophages, transposons [X] 1.00

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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere74.00%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere9.00%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated7.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009973Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_222 metaGHost-AssociatedOpen in IMG/M
3300009975Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaGHost-AssociatedOpen in IMG/M
3300009981Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaGHost-AssociatedOpen in IMG/M
3300009990Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaGHost-AssociatedOpen in IMG/M
3300009994Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300015270Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015273Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015278Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015284Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015301Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015306Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015312Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015313Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015319Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015320Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015329Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015330Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015334Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015335Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015337Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015339Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015350Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017408Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017414Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017432Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017440Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017445Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017692Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017693Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017694Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028051Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028054Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028056Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028058Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028062Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028064Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028142Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028463Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028470Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300032467Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032468Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032469Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032502Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032822Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032889Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033525Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033534Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033542Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070704_10090273113300005549Corn, Switchgrass And Miscanthus RhizosphereTEGPFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSALGKPEAGLSINPIIGESGADRLVSSEPLDTQLRKSWI*
Ga0068860_10157590113300005843Switchgrass RhizosphereMEGPFDPPAPLLPAPPALEAPSVASRVWSGVSGSGSLDYLAVSTLGKLETGVSINPIMGDSGANLLVPSEPLDIQFRKS*
Ga0105248_1145111423300009177Switchgrass RhizosphereLEALSAAAGVSDVSGLGSLGFSAVSTLGKLAAGVSINPITGDSGADRLVPSEPLDTQLRKSWT*
Ga0105136_10554313300009973Switchgrass AssociatedPDPLALEAPSVAAGVCSDASGFGSLDFSAVFTFGKMAAGVSINPIIGDSGADRLVPSEPLDTQLRKC*
Ga0105129_11541113300009975Switchgrass AssociatedADAGVSDVSGLGLLGFSAVSTLGKLATEVLINPIIGESGADRLVSSEPLDTQLRKSWT*
Ga0105133_11846223300009981Switchgrass AssociatedMEGPFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGFSTMSALGKLAAGVSINPITGELGADRLVPSETLDTQLRKSWT*
Ga0105132_11214613300009990Switchgrass AssociatedMGGPFDPSTPLLPDPQALEAPSAAAGVSDVSGFGLLGFTAMFALSKLAAGVSINPITGDSGADRLVPSELLDTQLQKFGLDLSHAPKGVGS*
Ga0105132_11298023300009990Switchgrass AssociatedPTLPGLTEAWNGTNRMERPFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAAGFSINPITGESGADRLVSSEPLDTQFRKSWT*
Ga0105132_12035313300009990Switchgrass AssociatedDPPALEAPSAAAGVSDVSGLGSLGFSAVSALRKPAAGLSINPITGESGADRLVPSEPLDTQLRKSWT*
Ga0105126_102981913300009994Switchgrass AssociatedMEGPFDPSAPLIPDPPALEAPSAAAGVSDVSGLGSLGFSAVSTLGKLAAGLSINPITGESGADRLVPSETLDTQLRKSWT*
Ga0134125_1209587713300010371Terrestrial SoilGTSRTEGPFDPSAPLLGDPLALEAPSAAAGVSDVSGLGSLGFSAVSTLGQLAVGFSINPITGESVADQLASSEPLDIQLQKSWT*
Ga0134126_1060365323300010396Terrestrial SoilPDPPALEAPSAAAGVSDVSGPGSLGFSAVSALGKLAAGVSINPITRESGADRLVSSEPLDTQFRKSWT*
Ga0134127_1097638513300010399Terrestrial SoilPSAAAGVSDVSGLGSLGLSAVSALGKLAAGVSINPITRESGADRLVSSETLDTQLRKSWT
Ga0134123_1224463313300010403Terrestrial SoilRIEGPFDPSAPLLPDPPALEAPSAAAGVSDFSGLGSLGFFVVSALGKLAAGVSINPITGDSGADRLVPSEPLDTQLRKSWT*
Ga0182183_104742513300015270Switchgrass PhyllosphereWKGTNRTEGPFDPSASLLQDPPAMEALSAASRVSDFSGFGAFGFSAVSTLGKLAAGVSINPIIGESGADRLVSSEPFDTQLQKSWI*
Ga0182183_106722823300015270Switchgrass PhyllosphereMAGPFDPSAPLLPGSAALEVPSAAAGVCSKTSGFGLSDVSALGILTVGFSINPIIGDSGADRLVPSELLDN*
Ga0182102_103530013300015273Switchgrass PhyllosphereMEGPFDPSPPLLLDPPALEAPSAAAGVRLGASRVGSLGFSAVSVFGKLAAGVSINPITGDSGADRLVPSEPPDTQLRKS
Ga0182099_106152813300015278Switchgrass PhyllosphereMVSALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAAGVSINPITGDSGADRLVPFEPLDTQLQKSWT*
Ga0182100_106648213300015280Switchgrass PhyllosphereLETTSDHQTVPFPTLPGLTEAWNGTNRMEPPFDPSAPLLLDPPALEASLAAAGVSDVSGLGKLGFSAVSALGKLAAGVSINPITGDSGADRLVPSEPLDTQLRKSWT*
Ga0182101_102228113300015284Switchgrass PhyllosphereMAGPLDPSTPLLPDPPALEAPSPATGVCLDPSEFGSLDFSAVSEFGKLAAGVSINPITGDSGADQVVPFKPLDIQLRKS*
Ga0182184_106102113300015301Switchgrass PhyllospherePQALEAPSAAAGVCLVFGSLDFSAVPTFGELAAGVSINPIMGDSGADRLVPSKPLDIQFRKS*
Ga0182180_108634713300015306Switchgrass PhyllosphereMEGPFDPSASLLLDPPALEAPSAAVGVSDVSRLGSLGFSAVSALGKLAAGFSINPITGESGADRLVSSEPFDTQLRKSWT*
Ga0182182_105661423300015311Switchgrass PhyllosphereDPPALEAPLAAAGVSDVSGLGSLGFSVVSTLGQLAVGFSINPITGESGADRLASSEPLDTQLRKSWT*
Ga0182182_106852713300015311Switchgrass PhyllosphereGTSRTEGPFDPSTPLLPDPQALEAPSAAAGVSDVSRLGSLGLSAVSALGKLAAGVKINPITGESGADRLVPSETLDT*
Ga0182168_104812013300015312Switchgrass PhyllospherePFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAAGVSINPITGDSGADRLVPSEPLDTQLRKSWT*
Ga0182164_103626223300015313Switchgrass PhyllosphereMEGPFDPSASLLRDPPALEALSVATGVSDFSGLGALGFSAVSTLGKLAAGVSINPIIGELGADRLVSSEPLDTQLRKSWI*
Ga0182164_105860513300015313Switchgrass PhyllosphereNGTSRTERHFDPSTPLLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAAGFSINPIIGESRADRLVSSEPLDTQFRKSWT*
Ga0182121_111021013300015316Switchgrass PhyllosphereDWNGTSQTEGSFDPSAPLLPDPLALEAPSAAAGISDVSGLGSLGFSAVSTLGQLAVGFSINLITGESGADRLASSEPLDIQLRKSWT*
Ga0182136_112747313300015317Switchgrass PhyllosphereMEGPFDPSAPLLLDPPALEAPSAAAGVSDVSGLGSLGFSTVSALRKLAAGVSINPITGESGVDRLVPSETLDT*
Ga0182130_106075213300015319Switchgrass PhyllosphereLEAPSAAAGVSDVSGLGSLGFSAVSALGKLAAGVSINPITGDSGADRLVPSEPLDT*
Ga0182130_107552213300015319Switchgrass PhyllosphereMAGPLDPSAPLLPVPPALEVPSAAIGVCLGVLRFGSFDTSAMSAFGKSADVFSINPIIGDSGADRLVPSELLCTQLQKSSI*
Ga0182130_110590113300015319Switchgrass PhyllosphereDWNGTSRTEGPFDPSAPLLPDPPALEAPSAAEGVSDVSGLGSIGFSAVSILGQLAARFSINPITGESGADRLASSEPLDTQLRKSWT*
Ga0182165_113826713300015320Switchgrass PhyllosphereKGTNRMEGPFDPSASLLPDPPALEALSAAAGVSDFSGLGALGFSAVSTLRKLAAGVSINPIIGESGADRLVSSKPLDTQLRKSWI*
Ga0182114_113717113300015327Switchgrass PhyllosphereEGPFDPSAPLLPDPPALEAPSAAAGVCSGASRVGSLGFSAVSVLGKLAARVLINPITGDSGADRLVPSELLDTQLRKSWT*
Ga0182135_106745923300015329Switchgrass PhyllosphereDWNGTSRTEGPFDPSAPLLTDPPALEAPSAAAGVSDISGLGSLGFSAVSTLGQLAVGFSINPITGESGADRLASSEPLDT*
Ga0182135_109456613300015329Switchgrass PhyllosphereMEGPFDPSAPLLPDPPALEAPSVAAGVSDVSGPGTLGFSAVSALGKLAAGVSIYPITGASGADRLVPSEPLDTQLRKS*
Ga0182135_113672713300015329Switchgrass PhyllosphereTSRKAGPFDPSAPLLPDPAALEVPSAAAGVCSKTSGFDLFDVSVLGVLTNGFSINPIIGDSGADRLVPSELLDTQLQKS*
Ga0182135_115013413300015329Switchgrass PhyllosphereLPDPLALEAPLAATGVDSEFGSLDFSAVSTFDKLAARVSINPITSDSGADRLVSSESLDTQLRKS*
Ga0182152_111831313300015330Switchgrass PhyllosphereDWNGTSRTEGPFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAVGVSINPITGESGADRLVSSEPLDTQLRKSWI*
Ga0182152_113550613300015330Switchgrass PhyllosphereLEAPSAAAGVSDVSGLGSLGFSAVSALGKPAAGFSINPITGELGADRLVSSEPLDTQFRKSWI*
Ga0182132_101119023300015334Switchgrass PhyllosphereMKEPFDPFTPQLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAVGVSINPITGESGADRLVSSEPLDTQLRKSWI*
Ga0182116_117677913300015335Switchgrass PhyllosphereIDWNGTSRTKGPFDPSAPLLRDPPVLEPPSAAAGVSDVSGLGWLGFSAVSALGKLAAGVSINPITGDSGADRLVPSEPLDTQLRKSWT*
Ga0182150_112042213300015336Switchgrass PhyllospherePSASLLPDPPALEALSAAVGVSDFSWLGALGFSDVSTLGKLAAGVLINPIIGDSGADRLVSSEPLDTQLRKSWI*
Ga0182151_106022513300015337Switchgrass PhyllosphereMEGPFDPPAPLLLAPPALEAPSVASGVWSGVSGSGSLDFPAVSTLGKLAAGVSINPIMGDSGADRLVPSEP
Ga0182151_110077913300015337Switchgrass PhyllosphereMEGTFDPSAPLIPDPPALKAPSAAAGVSDVSGFGSLGFSVVSALGKLAAGVSINPITGELGANRLLSSEPLDTQLRKS*
Ga0182151_114938713300015337Switchgrass PhyllospherePSAAAGVSDVSGFGPLGFLAVSALRKSAAGLLINPITGESGADRLVPSEPLDTQLQKSWT
Ga0182149_111462823300015339Switchgrass PhyllosphereAAGVSNVSGLGSLGFSAVSALGKLAAGFSINPIIGESGADRLVSSEPLDTRFRKSWT*
Ga0182149_115592613300015339Switchgrass PhyllosphereAPLLPDPPALEAPSAAAGVSDVPGLGSLGFSAVSTLGKLAAGVSINPITGESGADRLVSSEPLDTQLRKSWI*
Ga0182149_116682223300015339Switchgrass PhyllosphereTVGPFDPSASLLPDPPALEAPSAATGVDSEFGSLDFLAVSTFDKLAAGVLINPITGDSGADRLVSSESLDTQLRKS*
Ga0182115_109313813300015348Switchgrass PhyllosphereMAGPLDPSAPLLPVPPALEAPSAAIGVCLGVLRFGSFDTSAMSAFGKSADVFSINPIIGDSGADRLVPSELLCTQLQKSSI*
Ga0182115_113783413300015348Switchgrass PhyllosphereLEAPSAAAGVFSGASEFGSLDFSAMFTFGKMAAWVSINPITGDSGADQPVPSEPLDTQLRKS*
Ga0182115_122161513300015348Switchgrass PhyllosphereALEAPSAAAGVSDVSRLGSLGLSAVSALGKLAAGVKINPITGESGADRLVPSETLDT*
Ga0182115_126646123300015348Switchgrass PhyllosphereDWNGTSRTEGPFDPSAPLLPDPPALEAPSAATGVSDVSGLGSLGFSAVSILRQLAVGFSINPITGESGADRLASSEPLDTQLRKSWT*
Ga0182115_127481313300015348Switchgrass PhyllosphereTRMVPEGPLDPLLLDPPSLEAPSAAAGASDVSGLGSLGFSAVSALGKLAAGFTINPIIGESRADRLVSSEPLDTQFRKSWT*
Ga0182115_130045423300015348Switchgrass PhyllospherePLLPDPPALDAPSAAAGVSDVSGLGSLGFSAVSILGQLAVGFSINPITGESGADRLAYSELLDTQLRKSWT*
Ga0182185_128352413300015349Switchgrass PhyllosphereDPSASLLPDPPALEAPSAAAGVSDVSGLGLLGLSAVSALGKLAAGVSINSIIGESRADQLVPSETLDTQLRKSWT*
Ga0182163_125036813300015350Switchgrass PhyllosphereMKEPFDPFTPQLPDPPALEALSVAAGVSDFSGLGALGFSAVSTLGKLAAGVSINPIIGESGADRLVSSEPLDTQLRKSWI*
Ga0182167_120697913300015354Switchgrass PhyllosphereDPPALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAAGVSINPITGESGADRLVPSEPLDTQLRKSWT*
Ga0182167_124770823300015354Switchgrass PhyllosphereGIDWNGTSRTEGPFDPLLPDPPALEAPSAAARVSDVSGLGSLGFSAVSTLGQLAVGFSINPITGESGADRLASSEPLDTQLRKSWT*
Ga0182167_127307113300015354Switchgrass PhyllosphereLEAPSAAAGVSDVSGLGSLGFSAVSALGKPADGLSINPITGESGADRLVPSKPLDTQLRKSWT*
Ga0182167_131503313300015354Switchgrass PhyllospherePPALEAPSAAAGVSDVSGLGSLGLSAVSALEKLVARVSINPITGESGVDRLVPSETLDTQLRKSWT*
Ga0182167_134269313300015354Switchgrass PhyllosphereAPLLPDPPALEAPSAAAGVCSGASRVGSLGFSAVSTLGKLAAGVSINPITGDSGADRLVLSEPLDIQLRKSWS*
Ga0182197_109536913300017408Switchgrass PhyllosphereTEGPFDPSAPLLPDPPALEATSAAAGVSDVSGLGSLGFSAVSALGKLAAEFSINPITGESGADQIVSSEPLDT
Ga0182195_111534323300017414Switchgrass PhyllosphereNGTSRTEGPFDPSAPLLPDPPALEAPSVAAGVSDVSGLGSLGFSAVSALGKLAVGVSINPITGESGADRLASSEPLDTKLRKSWT
Ga0182195_121807813300017414Switchgrass PhyllosphereSRTAGPLDPSAPLLPDPPALEAPSPAAGVCSDPSGFGSLDFSAVSAFGKLAAGVSINPITGDSGADRLVLSEPLDIKLRKS
Ga0182196_108828413300017432Switchgrass PhyllosphereSRTEGPFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGFLAVSALGKPTAGLSINPITGESGSDRLVPSEPLDTQLQKSWTYLSHTVKDVGS
Ga0182196_114842113300017432Switchgrass PhyllosphereWNGTSRTEGPFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAVGVSINPITGESGADRLVSSEPLDTQLRKSWI
Ga0182194_112000913300017435Switchgrass PhyllosphereGPFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGLSAVSALGKLAAGVSINPVTGESGADRLVPSETPDTQLRKSWT
Ga0182194_113910423300017435Switchgrass PhyllosphereMKGPFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSILGQLAVGFSINPITGESGADRLASSEPLDTQLRKSWT
Ga0182200_108752123300017439Switchgrass PhyllosphereALEAPSAAARVCSGALGLGSLGFLAVSTLGKLAAGVSINPITGDSGADRLVPSELLFTQLRKSWI
Ga0182200_111916213300017439Switchgrass PhyllosphereMEGPFDPSAPLLLDPLALEAPSVAAGVSNVSGLGSLGFSAVSALGKLAVGVLINPIIEESGADRLVSFQPLYTQLWKFWT
Ga0182214_105717913300017440Switchgrass PhyllosphereSAAAGVSDVSGFGPLGFLAVYALRKSAAGLLINPITGESGADRLVPSEPLDTQLRKSWT
Ga0182198_111755813300017445Switchgrass PhyllosphereGPFDPSAPLLPDPPALEAPSAAAGVSDVSGLGSLGSSAMSALGKLAPGVSINPITGDSGADRLVPFEPLDT
Ga0182198_114939013300017445Switchgrass PhyllosphereLQQQLEYDQVLQGLARLAFSAVSVLGKLAAGVSINPITGDSGADRLVPYEPLDTQLRMSW
Ga0182198_116288513300017445Switchgrass PhyllosphereDPSAPLLPDPPALEAPSAAAAVCSGASGFGSLDFSAVFTFGKMAAGVSINPITGDSGADRLVPSEPLDTQLRKS
Ga0182210_112709313300017692Switchgrass PhyllosphereAPSAAAGVSDVSGLGSLGFSVVSILGQLAVGFSINPIIGESEADRLASSEPLDTQLRKSW
Ga0182210_115999713300017692Switchgrass PhyllosphereAPSAAAGVSDLLGLGSLGLSAVSALGKLAAGVSINPITVESGANRLVPFETLDTQLRKSW
Ga0182216_109244613300017693Switchgrass PhyllosphereNGTSRMEGPFDPSAPLLLDPPALEVPSAAAGVSDVSGLGSLGFSAVSALRKPAAGLSINPITGESGADRLVPSEPLDTQLRKSWT
Ga0182211_114759413300017694Switchgrass PhyllosphereWKGTSRTVGPFNPSALLLPDPPALEASSAAAGVCSGALGFGLLDFSAVSTFGKLAAMVSINPITGDSGADRLVPSEPLDTQLRKS
Ga0207650_1041881123300025925Switchgrass RhizosphereTSRTEGPFDPSAPLLPDPPALEALSAAAGVSDVSGLGSLGFSTVSALGKLAARVLINPITGDSGADRLVPSELLDTQLRKSWT
Ga0207712_1164965513300025961Switchgrass RhizospherePSAAAGVSDVSGLGSLGFSAVSALGKLAAGFSINPITGESGADRLVPSETLDTQLRKSWT
Ga0268344_101514313300028051PhyllosphereSRTEGPFDPFAPLLPDPPALEAPSAAAGVSDVSGLGSLGFSAVSILGQLAVGFSINPITGESGADQLASSEPLNTQLRKSWT
Ga0268306_100925313300028054PhyllospherePALEAPSAAAGVSDVSGLGSLGFSAVSALGKLAAGVSINPITGDSGADRLVPSEPLDTQLRKSWT
Ga0268330_104703613300028056PhyllospherePDPLALEASSAAAGVSDVSGLGSLGFSAVSALGKLAVGVSINPITGESGADRLVSSEPLDTQLRKSWT
Ga0268332_100142823300028058PhyllosphereMAGPFDPSAPLLPGSAALEVPSAAAGVCSKTSGFGLSDVSTLGILTVGFSINPIIGDSGADRLVPSELLDN
Ga0268342_104137713300028062PhyllosphereLLPDPPALEAPSAAAGVSDVSGLGSLGFSTVSALGKLAARVSINPITGDSGADRLVPSEPLDTQLRKSWT
Ga0268340_106000013300028064PhyllosphereEAPLAAAAVSDVSGLGSLGFSAVSALGKLAAGVSINPITGESGADQQVPSEPLDTQLQKSWT
Ga0268347_103140213300028142PhyllosphereLPDPPALEAPSAAAGVSDVLGLGSLGLSAVSALGKLAAGVSINPIIGESGADRLVPSETLDTQLRKSWT
Ga0268265_1213918413300028380Switchgrass RhizosphereTSRTEGPFDPSAPLLLDPPALEAPSAAAGVSDVSGLGSLGFSAVSTLGKLAAGVSINPITGESGADRLVSSEPLDT
Ga0268325_10181413300028463PhyllosphereSDPPALEAPLAAAGVSDVSGLGSLGFSVVSTLGQLAAGFSINPITGESGADRLASSEPLDTQLRKSWT
Ga0268307_100659013300028470PhyllosphereDPSAPLLPDPPALEAPSPATGVCLDPSGFGSLDFSAVSEFGKLAAGVSINPITGDSGAGRLVLSEPLDIQLRKS
Ga0214488_106160223300032467Switchgrass PhyllosphereMAGPFDPSAPLLPVPPALEAPSAAAGVCSGASGFGSLDFSAVFTFGKMAAGVSINPITGDSGADRLVPFEPLDTQLQKS
Ga0214482_100008953300032468Switchgrass PhyllosphereMVPVKRKDLLTLLPHYSQIHQLWKAPSAATGISDVSGLGSLGFSAVSTLGQLAVGFSINPIIRESGADRLASSEPLDTQLRKSWT
Ga0214491_108998513300032469Switchgrass PhyllosphereLLHYSQTHKEAPSAAAGVCSGASRVGSLGFSAVSVLGKLAAGVSINPITGDSRADRLVPSEPLDTQLRKSRT
Ga0214490_108014013300032502Switchgrass PhyllosphereHHSAPLFSDQPALEAPSAAAGVSDISGLGSFGFSAMSTLGQLAVGFSINPITGESGADRLASSEPLDTQLWKSWTRSFHAPKDVGP
Ga0314740_106348513300032822Switchgrass PhyllosphereNYSQIHQLWKAPSAATGISDVSGLGSLGFSAVSTLGQLAVGFSINPIIRESGADRLASSEPLDTQLRKSWT
Ga0314751_100018073300032889Switchgrass PhyllosphereMAGPFDPSAPLLPDPPALEAPSAAAGVCSDASGFGSLDFSAVFTFGKMAAGASINPIIGDSGADRLVPFEPLDTQLQKS
Ga0314758_109083523300033525Switchgrass PhyllosphereLLPDPPALEAHSAAAGVFSGASRVGSLGFSAVSVLGKLTAGVSINPITGDSRADRLVPSEPLDTQLRKSWT
Ga0314757_104717223300033534Switchgrass PhyllosphereMEGPFDTSAPLLPDPPALEAPSVAAGVSDVSRLGSLGFLAVSILGQLAVGFSINPITGESGADRLASSEPLDTQLQKSWT
Ga0314769_132117613300033542Switchgrass PhyllosphereMVPVKRKDLLTLLPHYSQIHQLWKAPSAATGISDVSGLDSLGFSAVSALGKLAAGFSINPITGESGADRLVSSGQLD

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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