NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F104302

Metagenome / Metatranscriptome Family F104302

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104302
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 90 residues
Representative Sequence MNFIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Number of Associated Samples 76
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 1.00 %
% of genes from short scaffolds (< 2000 bps) 1.00 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (97.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(26.000 % of family members)
Environment Ontology (ENVO) Unclassified
(86.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 65.83%    β-sheet: 0.00%    Coil/Unstructured: 34.17%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF05050Methyltransf_21 5.00
PF04055Radical_SAM 3.00
PF00011HSP20 3.00
PF04956TrbC 2.00
PF13358DDE_3 2.00
PF13538UvrD_C_2 1.00
PF02894GFO_IDH_MocA_C 1.00
PF13460NAD_binding_10 1.00
PF12852Cupin_6 1.00
PF07505DUF5131 1.00
PF08668HDOD 1.00
PF00271Helicase_C 1.00
PF13466STAS_2 1.00
PF01609DDE_Tnp_1 1.00
PF14196ATC_hydrolase 1.00
PF03551PadR 1.00
PF01979Amidohydro_1 1.00
PF05368NmrA 1.00
PF00662Proton_antipo_N 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 3.00
COG1009Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunitEnergy production and conversion [C] 2.00
COG3838Type IV secretory pathway, VirB2 component (pilin)Intracellular trafficking, secretion, and vesicular transport [U] 2.00
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 1.00
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 1.00
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 1.00
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.00
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 1.00
COG3293TransposaseMobilome: prophages, transposons [X] 1.00
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 1.00
COG4422Bacteriophage protein gp37Mobilome: prophages, transposons [X] 1.00
COG5421TransposaseMobilome: prophages, transposons [X] 1.00
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 1.00
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.00 %
All OrganismsrootAll Organisms3.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10004086All Organisms → cellular organisms → Bacteria10376Open in IMG/M
3300018086|Ga0187769_10842922Not Available693Open in IMG/M
3300033402|Ga0326728_10008495All Organisms → cellular organisms → Bacteria25465Open in IMG/M
3300033402|Ga0326728_10008991All Organisms → cellular organisms → Bacteria24342Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland26.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil22.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland12.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland10.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil10.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment5.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.00%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland4.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.00%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen3.00%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300004469Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 16 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004476Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009630Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009636Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011051Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 21 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011058Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011081Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011090Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016730Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018003Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300019082Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40EnvironmentalOpen in IMG/M
3300019275Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025506Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025507Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033755Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fractionEnvironmentalOpen in IMG/M
3300033982Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fractionEnvironmentalOpen in IMG/M
3300034091Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00NEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1000408683300000567Peatlands SoilMNFIPYIVVWVVLGIIVLVLAISRMRLAKREDKTLDILESESEAGQQVAMTKKITKIDRWGQVLTIVLALYGIILAGIYIYQAWQQSSKIQP*
JGI12270J11330_1003578233300000567Peatlands SoilMNFIPYIVVWVVLGIIVIVLAMSRMRLAKREDKTLDILESEREAGQQVEMTKKISKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP*
JGI12269J14319_1014758513300001356Peatlands SoilMNFIPYIVVWVVLGIIVIVLAMSRMRLAKREDKTLDILESEREAGQQVEMTKKISKIDRWGQVLTIVLVLYGIILAGIYIYQAWQ
Ga0068931_130019313300004469Peatlands SoilFIPYIVVWVVLGIIVIVLAVSRMRLAKREDKTLDILESEREAGQQIETTKKITKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0068966_143938823300004476Peatlands SoilMNFIPYIVVWVVLGIIVIVLAVSRMRLAKREDKTLDILESEREAGQQIETTKKITKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0116128_107522813300009518PeatlandMNYIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGTYIYQAWQQSSKLGFPI*
Ga0116108_105333913300009519PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0116218_112629813300009522Peatlands SoilMNFIPYIVVWVVLGIIVIVLAVSRMRLAKREDKTLDILESEREAGQQVEMTKKISKIDRWGQVLTIVLVLYGIILAGIYIYQAW
Ga0116221_105239623300009523Peatlands SoilMNFIPYIVVWVVLGIIVIVLAVSRMRLAKREDKTLDILESEREAGQQVEMTKKISKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0116114_105087513300009630PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0116102_100736943300009632PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0116112_123112413300009636PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDWWGQVLTIVLVLYGIILAGIYIYQAWQ
Ga0116118_115253713300009637PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0116110_112487313300009643PeatlandNGLTARSWRTVMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0116106_111000113300009645PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0116215_124694713300009672Peatlands SoilMNYVPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESESEAGQQVAMTKKITKIDRWGQVLTIVLALYGIILAGIYIYQAWQQSSKI
Ga0116223_1067490023300009839Peatlands SoilMNFIPYIVVWVVLGIIVIVLAVSRMRLAKREDKTLDILESEREAGQQIETTKKITKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKI
Ga0116223_1074551813300009839Peatlands SoilMNLIPFLVFWIVLAIIVLVLAISRMRLAHREDASLDVLEGDRVVEQQKEMATKLKRIDWWGQVLTVVVVLYGIILAGIHIYQAWQQSSKIQP*
Ga0074045_1094178623300010341Bog Forest SoilMNLIPFIVVWVVLGIIVIVLALSRMRLAKREDASLHVTEGERAAEQHKEMTKKLAKIDRWGQVLTVVMVLYGIILAGIHIYQVWQQTSKIQP*
Ga0136449_10089597513300010379Peatlands SoilMNLIPYLVVWIVLGIIVIVLAISRIRLAKREDASLDVLEGKREAEQQKEMAKKIGRIDWWGQVLTVVVVLYGIIL
Ga0136449_10215470523300010379Peatlands SoilMNLIPFLVFWIVLAIIVLVLAISRMRLAHREDASLDVLEGDRVVEQQKEMATKLKRIDWWGQVLTVVVVLYGIILAGIHIYQTWQQSSKIQP*
Ga0138540_15479513300011051Peatlands SoilRTVMNYVPYIVVWVVLGIIVIVLAVSRMRLAKREDKTLDILESEREAGQQIETTKKITKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0138541_109730313300011058Peatlands SoilTVMNYVPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQIETTKKITKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0138575_111425323300011081Peatlands SoilRTVMNYVPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEHEAGQQIETTKKITKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0138579_122201323300011090Peatlands SoilVMNYVPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQIETTKKITKIDRWGQVLTIVLALYGIILAGIYIYQAWQQSSKIQP*
Ga0181518_1043546813300014156BogMNYIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKISKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP*
Ga0181538_1015764523300014162BogMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKISKIDRWGQILTIVLVLYGIILAGIY
Ga0181538_1048865113300014162BogRIVMNLIPFLVLWIVFAIIVLVLAISRMRLAHREDASLDVLEGERVVEQQKEIATKLKRVDWWGQVLTVVVVLYGIILAGIHIYQTWQQSSKIQP*
Ga0182010_1011026713300014490FenMNLIPFLVGWIVLGLIVIVLLVSRIRLAKQADASLDVLESEREAKQQMEMTKKLERIDWWGQVLTV
Ga0182011_1000950743300014496FenMNLIPFLVGWIVLGLIVIVLLVSRIRLAKQADASLDVLESEREAKQQMEMTKKLERIDWWGQVLTVVVVLYGIILAGIHIYQVWQQTSKIQP*
Ga0182021_1055467213300014502FenMNLIPFLVGWIVLGLIVIVLLVSRIRLAKQADASMDVLESEREAKQQMEMTKKLERIDWWGQVLTVVVVLYGIILAGIHIYQVWQQTSKIQP*
Ga0181515_113306313300016730PeatlandRTVMNYIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKISKIDRWGQILTIVLVLYGIILAGIYIYQAWQLSSKIQP
Ga0181515_125959413300016730PeatlandVMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0181515_135558313300016730PeatlandVIELLVSRIRLAKREDASLDVLEDTNRAKEQMEMTAKLARIDWWGQVLTVVVVLYGIILAGIHIYQTWQQSSKIQP
Ga0181505_1043978213300016750PeatlandIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKISKIDRWGQVLTIVLALYGIILAGIYIYQAWQQSSKIQP
Ga0187856_120068213300017925PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187806_118987613300017928Freshwater SedimentSDSALIARSWRTDMNVIPYIVVWVVLGIIVAVLAISRMRLAKREDASLDIFESERQAGQQKEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187803_1016842813300017934Freshwater SedimentMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQVEMTKKIAKIDRWGQVLTIILVLYGIILAGIYICQAWQQSSKIQP
Ga0187848_1007040423300017935PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187854_1002356313300017938PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187850_1027228013300017941PeatlandSNGLTSRSWKTVMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187819_1056462513300017943Freshwater SedimentMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKSLDILESEREAGQQKEMTMKIATIDRWGQVLTIVLALYGIILAGIYIYQAWQQSSKIQP
Ga0187819_1081498913300017943Freshwater SedimentGIVVIVLAISRMRLAKREDASLHVLEGEREVEQQKEMTMEIAKIDLWGQILTVVVVLYGVVLAAIYIYQSWQQSSRIQP
Ga0187879_1042979213300017946PeatlandTVMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187879_1046916513300017946PeatlandTVMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187783_1102875113300017970Tropical PeatlandMNYVPYIVVWVVLGIIVVVLAVSRMRLAKREDATLDVLESEGLAAQQKEMTRKLAKVDRWGQILTIILVLYGITLAGIYVYQAWQQSSRIQP
Ga0187781_1006797323300017972Tropical PeatlandMNFIPYIVVWVVLGIIVAVLAVSRMRLAKREDATLDVLESEGVAAQQKEMTRKLAKVDRWGQVLTIILVLYGITLAGIYIYQAWQQSSRIQP
Ga0187781_1013656433300017972Tropical PeatlandMNLVPYIVVWVVVGLVVIVLAISRMRLAKREDASLHVLASEGEAAQQKAMSLKLAKIDWWGQVLTVVVVLYGIILAGIYVYHIWQESSKIQP
Ga0187781_1023978023300017972Tropical PeatlandMNLIPYIAVWVVLGIIVIVLAISRMRLAKREDASLHVLENEREAERQKAMTKKLARIDLWGQVLTVVVVLFGIILAGIYIYGAWEQAGRIQP
Ga0187782_1002803253300017975Tropical PeatlandMNFIPYIVIWVVLGIIVVVLAVSRMRLAKREDATLDVLESEGVAAQQKEMTRTLARVDRWGQVLTIILVLYGITLAGIYIYQAWQQSSRIQP
Ga0187782_1023080523300017975Tropical PeatlandMNLVPYIVVWVVVGLVVIVLAIYRMRLAKREDASLHVLASEGEAAQQKAMSLKLAKIDWWGQVLTVVVVLYGIILAGIYVYHIWQESSKIQP
Ga0187782_1088462713300017975Tropical PeatlandNFIPYIAVWVVLGVVVIVLAVSRMKLAKREDATLDVLETEGVAEQQKMMTKKLARIDRWGQILTIILVLYGITLAGIYIYQAWQQSSRIQP
Ga0181520_1000863883300017988BogMNYIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKISKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187876_122878313300018003PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187805_1001693813300018007Freshwater SedimentIVVWVVLGIIVAVLAISRMRLAKREDASLDIFESERQAGQQKEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187888_136127823300018008PeatlandMNLIPYLVVWIVLGIIVIVLLVSRIRIAKREDASLDVLEGEREAEQQKEIATKLKRIDWWGQVLTVVVVLYGIILAGIHIYQTWQQSSKIQP
Ga0187873_132567213300018013PeatlandMNYIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187860_121896413300018014PeatlandMKYIPYIAVWVVLGIIVLVLAVSRMRLAKQEDASLHVLESEREAEQHKGMTKKLGRIDWWGQVLTVVVVLYGIILAGIHIYQTWQQSSKIQP
Ga0187880_105712213300018016PeatlandMNFIPYIVVWVVLGIVVLVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSK
Ga0187882_110527013300018021PeatlandMNFIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187889_1037045113300018023PeatlandMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKSLDILKSESEAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187857_1023103213300018026PeatlandIVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187869_1034181313300018030PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSK
Ga0187883_1073962813300018037PeatlandGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187855_1049119613300018038PeatlandMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESERAAGQQVEMTKKISKIDRWGQVLTIVLALYGIILAGIYIYQ
Ga0187862_1041033213300018040PeatlandMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKSLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187862_1074404613300018040PeatlandYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILESESEAGQQIEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187858_1043806713300018057PeatlandMNFIPYIVVWVVLGIVVLVLAISRMRLAHREDASLDVLEGDRVVEQQKEIATKLKRIDWWGQVLTVVVVLYGIILAGIHIYQTWQQSSKIQP
Ga0187858_1056770613300018057PeatlandVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187784_1006650343300018062Tropical PeatlandMNFIPYIVVWVVLGIIVVVLAVSRMRLAKREDATLDVLESEGVAAQQKEMTRTLARVDRWGQVLTIILVLYGITLAGIYIYQAWQQSSRIQP
Ga0187784_1037648723300018062Tropical PeatlandMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187784_1080169913300018062Tropical PeatlandMNYVPYIVVWVVLGIIVVVLAVSRMRLAKREDATLDVLESEGLAAQQKEMTRKLAKVDRWGQVLTIILVLYGITLAGIYVYQAWQQSSRIQP
Ga0187769_1084292223300018086Tropical PeatlandMNFIPYIVVWVVLGIIVVVLAVSRMRLAKREDATLDVLESEGVAAQQKEMTRTLARVDRWGQVLTIILVLYGITLAGIY
Ga0187771_1047662223300018088Tropical PeatlandSAAFQSFCLLDSVVQRRSNGLTARSWGTVMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQIEMTKKIARIDRWGQILTIVLVLYGISLAGIYIYQAWQQSSKIQ
Ga0187852_127121223300019082PeatlandMNLIPYFVVWVVLGIIVIVLAVSRMRIAKREDASLDILESEREAEQQKDMNKELAKIDLWGRVLTVVVVLYGIILAGIYIYQTWQQSSKIQP
Ga0187798_117325113300019275PeatlandWGTVMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187800_109107413300019278PeatlandVMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0187800_159845013300019278PeatlandMNFIPYIVVWVVLGVVVIMLAISRMRLAKREDATLDVLETEGVAEQQKTMTKKLARIDRWGQILTIILVLYGIALAGIYIYQAWQQSSRIQP
Ga0187797_170543013300019284PeatlandGTVMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0208937_112490613300025506PeatlandMNFIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIARIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0208188_106280113300025507PeatlandMNYIPYIVVWVVLGIVVIVLAISRMRLAKREDKTLDILEGESEAGQQIEMTKKIAKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSK
Ga0208044_103854023300027625Peatlands SoilMNFIPYIVVWVVLGIIVLVLAISRMRLAKREDKTLDILESESEAGQQVAMTKKITKIDRWGQVLTIVLALYGIILAGIYIYQAWQQSSKIQP
Ga0209517_1004911833300027854Peatlands SoilMNFIPYIVVWVVLGIIVIVLAMSRMRLAKREDKTLDILESEREAGQQVEMTKKISKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0209415_1016465433300027905Peatlands SoilMNFIPYIVVWVVLGIIVIVLAMSRMRLAKREDKTLDILESEREAGQQVEMTKKISKIDRWGQVLTIVLVLYGIILAGIYIY
Ga0209415_1023393313300027905Peatlands SoilMNFIPYIVVWVVLGIIVIVLAVSRMRLAKREDKTLDILESEREAGQQIETTKKITKIDRWGQVLTIVLVLYGIILAGIYIY
Ga0316363_1001057363300030659Peatlands SoilMNFIPYIVVWVVLGIIVIVLAVSRMRLAKREDKTLDILESEREAGQQIETTKKITKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0316363_1022046113300030659Peatlands SoilVMNFIPYIVVWVVLGIIVIVLAMSRMRLAKREDKTLDILESEREAGQQVEMTKKISKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0335078_1047503313300032805SoilMNYIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQIEMTKKITKIDRWGQILTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0335081_1175515923300032892SoilMNYIPYIVVWVVLGIIVIVLAVSRMRLAKREDKTLDILEGEREAGQQKEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQLSSKIQP
Ga0335077_1100104113300033158SoilMKFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESERQAGQQKEMTKKIAKIDRWGQVLTIVLALYGIILAGIYIYQAWQQSSKIQP
Ga0326728_10002986113300033402Peat SoilMNFIPYIVVWVVLGIIVIVLAVSRMSLAKREDATIHVLENEREVERQKELTQKIAKIDLWGQALTVVLVLYGIILGGIYTYHAWLQSSKAP
Ga0326728_10008495143300033402Peat SoilMNFIPYIVVWVVLGIMVIVLAISRMRLAKREDKSLDILESEREAGQQMEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQTSKIQP
Ga0326728_1000899133300033402Peat SoilMNYIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILEGEREAGQQVEMTKKISKIDRWGQILTIVLVLYGIILAGIYIYQSWQLSSKIQP
Ga0326728_1072684213300033402Peat SoilMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQKEMTKKIAKIDRWGQVLTIVLALYGIILAGIYIYQAWQQSSKIQP
Ga0326727_1075877513300033405Peat SoilMNLIPFLVLWIVLAIIVLVLAISRMRLAHREDASLDVLEGERVVEQQKEIATKLKRIDWWGQVLTVVVVLYGIILAGIHIYQAWQQSSKIQP
Ga0326727_1077095113300033405Peat SoilMNFIPYIVVWVVLGIIVIVLAISRMRLAKREDKTLDILESEREAGQQVEMTKKISKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQSSKIQP
Ga0326727_1127793113300033405Peat SoilRIMNLVPYIVVWVVLGIIVIVLAVFRMRLVRQEDKTLDVLENERVAEEQKQITAKIKKIDRWGQALTVVVVLYGIILAGTYIYHLWQLSSRIQP
Ga0371489_0000798_10212_105713300033755Peat SoilMLGEAYRGPVVEFVNCNTTLIARFWRTVMNFIPYIVVWVVLGIIVIVLAVSRMSLAKREDATIHVLENEREVERQKELTQKIAKIDLWGQALTVVLVLYGIILGGIYTYHAWLQSSKAP
Ga0371487_0193843_27_2573300033982Peat SoilVIVLAISRMRLAKREDKTLDILEGEREAGQQVEMTKKISKIDRWGQILTIVLVLYGIILAGIYIYQSWQLSSKIQP
Ga0326724_0011101_1_2613300034091Peat SoilMNFIPYIVVWVVLGIMVIVLAISRMRLAKREDKSLDILESEREAGQQMEMTKKIAKIDRWGQVLTIVLVLYGIILAGIYIYQAWQQT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.