NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F104285

Metagenome Family F104285

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104285
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 55 residues
Representative Sequence MSQPYVDGITDTVTHNLASSLTAGQITAGQDTLTISVVCPDRWFFGDFAVVTG
Number of Associated Samples 80
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 96.97 %
% of genes near scaffold ends (potentially truncated) 90.00 %
% of genes from short scaffolds (< 2000 bps) 94.00 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (88.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(24.000 % of family members)
Environment Ontology (ENVO) Unclassified
(39.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.70%    β-sheet: 9.88%    Coil/Unstructured: 86.42%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00106adh_short 4.00
PF13336AcetylCoA_hyd_C 3.00
PF00455DeoRC 1.00
PF08240ADH_N 1.00
PF00361Proton_antipo_M 1.00
PF00296Bac_luciferase 1.00
PF03551PadR 1.00
PF12802MarR_2 1.00
PF13193AMP-binding_C 1.00
PF13560HTH_31 1.00
PF01566Nramp 1.00
PF00069Pkinase 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 4.00
COG1349DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR familyTranscription [K] 2.00
COG0120Ribose 5-phosphate isomeraseCarbohydrate transport and metabolism [G] 1.00
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 1.00
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 1.00
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.00
COG1914Mn2+ or Fe2+ transporter, NRAMP familyInorganic ion transport and metabolism [P] 1.00
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A88.00 %
All OrganismsrootAll Organisms12.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003219|JGI26341J46601_10057886Not Available1197Open in IMG/M
3300003219|JGI26341J46601_10184326Not Available571Open in IMG/M
3300003368|JGI26340J50214_10164274Not Available554Open in IMG/M
3300004091|Ga0062387_100477029Not Available864Open in IMG/M
3300004092|Ga0062389_101335580Not Available902Open in IMG/M
3300004152|Ga0062386_100948688Not Available712Open in IMG/M
3300005158|Ga0066816_1012712Not Available641Open in IMG/M
3300006059|Ga0075017_101641466Not Available508Open in IMG/M
3300009520|Ga0116214_1190456Not Available770Open in IMG/M
3300009520|Ga0116214_1378004Not Available551Open in IMG/M
3300009522|Ga0116218_1310060Not Available706Open in IMG/M
3300009524|Ga0116225_1144065Not Available1089Open in IMG/M
3300009665|Ga0116135_1373649Not Available574Open in IMG/M
3300009672|Ga0116215_1366114Not Available625Open in IMG/M
3300009683|Ga0116224_10199471Not Available958Open in IMG/M
3300009698|Ga0116216_10357903Not Available887Open in IMG/M
3300009698|Ga0116216_10677310Not Available620Open in IMG/M
3300009698|Ga0116216_10756530Not Available583Open in IMG/M
3300009700|Ga0116217_10139203Not Available1628Open in IMG/M
3300009700|Ga0116217_10713855Not Available620Open in IMG/M
3300009700|Ga0116217_10838377Not Available565Open in IMG/M
3300009764|Ga0116134_1047752All Organisms → cellular organisms → Bacteria1646Open in IMG/M
3300009839|Ga0116223_10710543Not Available577Open in IMG/M
3300010341|Ga0074045_10022145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4954Open in IMG/M
3300010341|Ga0074045_10022768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4869Open in IMG/M
3300010343|Ga0074044_10384498Not Available920Open in IMG/M
3300010379|Ga0136449_100970828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1373Open in IMG/M
3300010379|Ga0136449_101233341Not Available1174Open in IMG/M
3300010379|Ga0136449_102054218Not Available841Open in IMG/M
3300010379|Ga0136449_102191860Not Available806Open in IMG/M
3300010379|Ga0136449_104552995Not Available509Open in IMG/M
3300015372|Ga0132256_102541059Not Available613Open in IMG/M
3300016270|Ga0182036_11252058Not Available618Open in IMG/M
3300016294|Ga0182041_12195569Not Available516Open in IMG/M
3300016357|Ga0182032_10596969Not Available918Open in IMG/M
3300016422|Ga0182039_10209600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1560Open in IMG/M
3300017821|Ga0187812_1036860Not Available1666Open in IMG/M
3300017926|Ga0187807_1042267Not Available1411Open in IMG/M
3300017926|Ga0187807_1056768Not Available1215Open in IMG/M
3300017928|Ga0187806_1283073Not Available581Open in IMG/M
3300017937|Ga0187809_10065365Not Available1186Open in IMG/M
3300017942|Ga0187808_10089458Not Available1332Open in IMG/M
3300017943|Ga0187819_10183841Not Available1237Open in IMG/M
3300017943|Ga0187819_10557418Not Available651Open in IMG/M
3300017946|Ga0187879_10463050Not Available703Open in IMG/M
3300017959|Ga0187779_10103329All Organisms → cellular organisms → Bacteria1718Open in IMG/M
3300017959|Ga0187779_10245860Not Available1131Open in IMG/M
3300017966|Ga0187776_11263611Not Available556Open in IMG/M
3300017970|Ga0187783_10858292Not Available654Open in IMG/M
3300017972|Ga0187781_10442884Not Available930Open in IMG/M
3300017972|Ga0187781_11124437Not Available577Open in IMG/M
3300017973|Ga0187780_10366889Not Available1018Open in IMG/M
3300017973|Ga0187780_10829049Not Available670Open in IMG/M
3300017974|Ga0187777_10334738Not Available1039Open in IMG/M
3300017974|Ga0187777_11197641Not Available555Open in IMG/M
3300017999|Ga0187767_10254642Not Available579Open in IMG/M
3300018001|Ga0187815_10234158Not Available777Open in IMG/M
3300018012|Ga0187810_10460179Not Available540Open in IMG/M
3300018034|Ga0187863_10296243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia899Open in IMG/M
3300018034|Ga0187863_10577267Not Available632Open in IMG/M
3300018044|Ga0187890_10318515Not Available873Open in IMG/M
3300018085|Ga0187772_10051778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2524Open in IMG/M
3300018088|Ga0187771_11158718Not Available656Open in IMG/M
3300018090|Ga0187770_10491709Not Available970Open in IMG/M
3300021178|Ga0210408_10191491Not Available1625Open in IMG/M
3300021479|Ga0210410_10694406Not Available899Open in IMG/M
3300027568|Ga0208042_1168277Not Available547Open in IMG/M
3300027604|Ga0208324_1052018Not Available1191Open in IMG/M
3300027662|Ga0208565_1121979Not Available773Open in IMG/M
3300027698|Ga0209446_1107641Not Available716Open in IMG/M
3300027825|Ga0209039_10421282Not Available508Open in IMG/M
3300028759|Ga0302224_10361069Not Available588Open in IMG/M
3300028863|Ga0302218_10125941Not Available809Open in IMG/M
3300030494|Ga0310037_10079859All Organisms → cellular organisms → Bacteria1531Open in IMG/M
3300030520|Ga0311372_10072303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6478Open in IMG/M
3300031525|Ga0302326_11166757All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300031543|Ga0318516_10570464Not Available647Open in IMG/M
3300031546|Ga0318538_10284939Not Available889Open in IMG/M
3300031680|Ga0318574_10914295Not Available514Open in IMG/M
3300031724|Ga0318500_10543629Not Available586Open in IMG/M
3300031747|Ga0318502_10615405Not Available654Open in IMG/M
3300031764|Ga0318535_10417245Not Available598Open in IMG/M
3300031765|Ga0318554_10417324Not Available761Open in IMG/M
3300031771|Ga0318546_10065596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2304Open in IMG/M
3300031796|Ga0318576_10462068Not Available599Open in IMG/M
3300031799|Ga0318565_10207509Not Available953Open in IMG/M
3300031835|Ga0318517_10359632Not Available658Open in IMG/M
3300031896|Ga0318551_10385258Not Available796Open in IMG/M
3300031910|Ga0306923_11229002Not Available799Open in IMG/M
3300032044|Ga0318558_10150251Not Available1121Open in IMG/M
3300032055|Ga0318575_10534805Not Available595Open in IMG/M
3300032059|Ga0318533_10737563Not Available723Open in IMG/M
3300032160|Ga0311301_10836596Not Available1255Open in IMG/M
3300032160|Ga0311301_10954617Not Available1143Open in IMG/M
3300032770|Ga0335085_10625346Not Available1208Open in IMG/M
3300032828|Ga0335080_12014651Not Available559Open in IMG/M
3300033158|Ga0335077_11058167Not Available805Open in IMG/M
3300033158|Ga0335077_11279238Not Available714Open in IMG/M
3300034124|Ga0370483_0113351Not Available898Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil24.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland14.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment10.00%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil8.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.00%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.00%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil3.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300003368Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005158Soil and rhizosphere microbial communities from Laval, Canada - mgHAAEnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028863Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI26341J46601_1005788633300003219Bog Forest SoilMVSQLYVDGITDTVSHGIASSLTAGQIAIAVYEETLSVSVVCPDRWFP
JGI26341J46601_1018432613300003219Bog Forest SoilMVSQLYVDGITDTVSHGIASSLTAGQIAIAVYEETLSVSVVCPD
JGI26340J50214_1016427413300003368Bog Forest SoilMMAQPYVDGITDTVPHRIASSLAAGQIAADEDTISVSVVWPDRWFLGDFAVVTSRDGRAFAGEV
Ga0062387_10047702913300004091Bog Forest SoilMVSQLYVDGITDTVPHNIASSLTANQTAADEDTISIWVVCPDRWFFGDFAV
Ga0062389_10133558013300004092Bog Forest SoilMMAPSYVDGITDTVAHSIVSSLTANQIAADQDTVSVSVVWPDRWFLGDFA
Ga0062386_10094868823300004152Bog Forest SoilMISQPYVDGITDTVPHGIASILTAGQIQIAAGQDTLSVSVVSPDRWFLGDAAV
Ga0066816_101271223300005158SoilMSQPYVDGITDTVPHKFASSLTAGEIAAGEDAVSVSVVCPDRWFLGDFAVVTSRDGRVFAGE
Ga0075017_10164146623300006059WatershedsMVSQPYVDGITDTVPHGIASTLTAGQIAIAAGQDTLSVAVVCPDRWFPGD
Ga0116214_119045613300009520Peatlands SoilMAQPYVDGITDTVAHRIASSLTAVQIAADEDTVSVSVVCPDRWFLGDFAVVTSRDGLA
Ga0116214_137800413300009520Peatlands SoilMSQAYVDGITDTVPHTIASSLTAGQIPAGEDTISISVVWPDRWFLGDFAVVT
Ga0116218_131006013300009522Peatlands SoilLVSQPYVDGITDTVSHGITSILTAGQIQIAAGQDTLSVAVVSPDRWFPGD
Ga0116225_114406533300009524Peatlands SoilMLSQPYVDGITDTVTHDVASSLTVGQIADGRSTLTISVVCPDRWFHGDL
Ga0116135_137364913300009665PeatlandMSQPYVKGITDTLTHDIASSLTAGRIAADGNTLSVAVVCPDR*
Ga0116215_136611413300009672Peatlands SoilMVSPLYVDGITDTVPHNIASSLTAGQTAADEDTISIWVVCPD
Ga0116224_1019947113300009683Peatlands SoilMMAQSYVDGITDTVAHSIASSLTAVQIAADEDTVSVSVVWPDRWFLGDFAVVTSR
Ga0116216_1035790313300009698Peatlands SoilMMAQSYVDGITDTVAHSIASSLTAVQIAADEDTVSVSVVWPDRWFLGDFAVVTSRDGLA
Ga0116216_1067731013300009698Peatlands SoilMGSQLYVNGITDTVSHGIASSLTAGQIAIAVYEETLSVSVVCPDRWFPGDVAVVTS
Ga0116216_1075653013300009698Peatlands SoilMMSQPYVDGITDTVTHDLGSSLTAGQIAASQDALTVSVVCPDRWF
Ga0116217_1013920313300009700Peatlands SoilMVSQPYVDGITDTVPHSIASSLTAGQIAAGEDAASVSVVCTDRWFLGDFAVVTSRDGR
Ga0116217_1071385513300009700Peatlands SoilMLSQAYVDGITDTVTHHIASPLTAGQIAAAEDTVGVSVICPDRWFPGDFAVVTSRD
Ga0116217_1083837713300009700Peatlands SoilMSQPYVDGITDTVPHDIASSLTAGQTAADEDTISIWVVCPDRWFFGDFAVVTSRDG
Ga0116134_104775213300009764PeatlandMMAQPYVDGITDTVAHRIASSLTAGQIAADEDTVSVSVICPDRWFLGDFAVVTSRDGRAFAGEV
Ga0116223_1071054313300009839Peatlands SoilMSQTYVDGITDTVPHNIASSLTAAQIAADEDTLSISVVCPDRWF
Ga0074045_1002214513300010341Bog Forest SoilMMAQPYVDGITDTVPHRIASSLAASQIPADEDTISVRVVSPDRWFLGDFAV
Ga0074045_1002276813300010341Bog Forest SoilMVSQLYVDGITDTVPHDIASILTASQIEIAVDEDTLSVSVVCPDRWFLGDVAMVTSRDGHAFAGE
Ga0074044_1038449813300010343Bog Forest SoilMAQPYVDGITDTVAHSIASSLTAGQIAAHEDTVSVSVVCPDRWFLGDFAVVTSRDGRAFAGEV
Ga0136449_10097082823300010379Peatlands SoilMSQPYVDGITDTVTHSLARSLTVGQITAGQGTLTISVVCPDRWFFGDFAVVTRRDGR
Ga0136449_10123334113300010379Peatlands SoilMSQPYVDGITDTVTHNLANSLTAGQIAAGQDTLTISVVCPDRWFFGDFAVVTRRDGR
Ga0136449_10205421813300010379Peatlands SoilMMAQPYVDGITDTVAHSIASSLTAGEIAAYEDTISVSVVWPDRWFLGDFAVVTSRDGRAFAGEV
Ga0136449_10219186023300010379Peatlands SoilMAQPYVDGITDTVAHRIASSLTAGEIAAHEDTVNVSVVCPDRWFLGDFAVVTSRDGRAFAGEVAGM
Ga0136449_10455299513300010379Peatlands SoilMMAPSYVDGITDTVAHRIVSSLTANQIAADQDTVSVSVVWPDRWFLGDFAVVTSRDGRAFAGEVAGMD
Ga0132256_10254105913300015372Arabidopsis RhizosphereMLSQAYVDGITDTVSHHIASSLTAGQIAAAEDTVSVSVVCPDRWFLGDFAVVT
Ga0182036_1125205813300016270SoilMSQPYVDGITCPVTHNLASSLTAGQITAGQDMLIISVVCPDRWFFGDFAVVTG
Ga0182041_1219556913300016294SoilMSQPYVDGITDTVTHNLASSLTAGQITAGQDMLIISVVCPDRWFFGDFAVVTGRDGRAFACHLQHVERERRQRR
Ga0182032_1059696913300016357SoilMSQPYVDGITDTVTHNLASSLTAGQITAGQDTLTISVVCPDRWFFGDFA
Ga0182039_1020960023300016422SoilMMSQPYVDGIRDKVSHNFASSLTADQIPADEDKVTISVLCPDRWFLGDFAVV
Ga0187812_103686033300017821Freshwater SedimentMVSQLYVHGITDTVPHSIASSLTAGQIAADQDTISISVICPDRWFLGDFAVVTSRDARHP
Ga0187807_104226713300017926Freshwater SedimentMVPQPYVNGITGTVPHGIASSLTASQIGIAAGDTVSVSVVCPDRWFARRHRGGHQP
Ga0187807_105676813300017926Freshwater SedimentMSQPYVDGITDTVTHNLASSLTAGQIPAGQGTLTISVVCPDRWFFGDFAVVTRRDGHAF
Ga0187806_128307313300017928Freshwater SedimentMMSQPYVDGITDTVTHNLGSRLTVGQIAACQDTLSVSVVCPDRWFFGD
Ga0187809_1006536513300017937Freshwater SedimentMSQPYVDGITDTVTHNLARSLTAGQITAGQDTLTIAVICPDRWFFGDF
Ga0187808_1008945813300017942Freshwater SedimentMLSQPYVDGITDTVTHDIASSLTVGQIAADRSTLTISVVCPDRWFCGDLAVVTSRD
Ga0187819_1018384113300017943Freshwater SedimentMSQPYVDGITDTVTHNLASSLTAGQIPAGQGTLTISVVCPDRWFFGDFAV
Ga0187819_1055741823300017943Freshwater SedimentMLSQPYVDGITDTVTHDLGSSLTAGQIAASQDRLTVLVVCPDRWFFGDFAV
Ga0187879_1046305013300017946PeatlandMSQAYVHGITDTLTHDIASSLTAGRIAADGNTLSVAVVCPD
Ga0187779_1010332913300017959Tropical PeatlandMVSQPYVDGITETVTRSFASSLTAGQITVGEDTVSISVLCPERWLPGDVTVVTSRDGRAFAGQV
Ga0187779_1024586013300017959Tropical PeatlandMMAQPYVHGITDTVTQHIASSLTAGQIAPGQHTLSVAVVSPDRWLPGDIAVVTSRDGHAFAGQVE
Ga0187776_1126361113300017966Tropical PeatlandMVSQPYVDGITDTVSHGIASSLTAGQIAADEGTLKVSVVCPDRWFLGDV
Ga0187783_1085829213300017970Tropical PeatlandMLSQPYVEGITDTVTHSIASSLTAGQIAVAADTVSIAVISPDRWHPGDFAVVTSRDGRAFAGEVE
Ga0187781_1044288413300017972Tropical PeatlandMMSQPYVEGITDTVTHDLASNLTAGQIAAGQDTLTVSVVCPDRWSFGDFAVVTSRDGR
Ga0187781_1112443713300017972Tropical PeatlandMVSQPYVDGITDTVPHGLASSLTASQLRITAGDTLSVLVVCPDRWFPGDVAVVT
Ga0187780_1036688923300017973Tropical PeatlandMMAQPYVHGITGMVTHDIASPLTAGQIAAGDTLSAAVVCPDRWFPGDGAVITSRDGRAPA
Ga0187780_1082904923300017973Tropical PeatlandMVSQFYVDGITDTVTHDIASSLTAAQITADSTFSIWVASADRWFPGDTAVVTSR
Ga0187777_1033473823300017974Tropical PeatlandMMSQPYVDGVTDTVTHDLGSSLTVGQIAACQDTLAVSVVCPDRWFFGDFAVVTSRDGRVFAGE
Ga0187777_1119764113300017974Tropical PeatlandMMAQPYVDGITDTVTHNIVSGLTADQIAVGENTISLPVVCPDRWFPGDFAVVTSRDGRAFAGE
Ga0187767_1025464213300017999Tropical PeatlandMMAQPYVHGITDTVTQHIASSLTAGQIAPGQHTLSVAVVSPDRWLPGDIAVVT
Ga0187815_1023415833300018001Freshwater SedimentMVSQLYVHGITDTVPHSIASSLTAGQIAADQDTISISVICPDRWF
Ga0187810_1046017913300018012Freshwater SedimentMSQPYVDGITDTVTHNLASSLTAGQIPAGQGTLTISVVCPDRWF
Ga0187863_1029624313300018034PeatlandMSQAYVHGITDTLTHDIASSLTAGRIAADGNTLSVAVVCPDR
Ga0187863_1057726713300018034PeatlandMSQPYVKGITDTLTHDIASSLTAGRIAADGNTLSVAVVCPDR
Ga0187855_1020463413300018038PeatlandMAQPYVDGITDTVPHRIESSLAASQIAAGEDTIRVPVV
Ga0187890_1031851513300018044PeatlandMSQPYVDGITDTVTHNLARNLTAGQIAAGQDTLTISVVCADRWFFSDFAVVTRRDGH
Ga0187772_1005177823300018085Tropical PeatlandMVSQPYVDGITDTVSHGIASSLTAGQITADKGTVSVSVVC
Ga0187771_1115871813300018088Tropical PeatlandMAQPYVDGITDTVTHHIASSLTADQIATDDEDSLSVLVVCPDRWFPGDVAVVTSR
Ga0187770_1049170913300018090Tropical PeatlandVKMSQPYVDGITDTVTHNIVSSLTAGQFAVGQDTLTISVVCPDR
Ga0210408_1019149133300021178SoilMVSQPYIDGITDTVSHGIASTLTVGQDTLSVAVICPDRWFPATSPWSPAATATRSPAR
Ga0210410_1069440623300021479SoilMVSQPYIDGITDTVSHGIASTLTAGQDTLSVAVICPDRWFPATSPWSPAATATRSPAR
Ga0208042_116827713300027568Peatlands SoilMVSQPYVDGITDTVSHGITSTLTAGQIQIAAGQDTLSVAVVCPDRWFPGDFAVVTSRDGHAFAGEV
Ga0208324_105201813300027604Peatlands SoilMAQPYVDGITDTVAHSIASSLTAGQIPADQDTISVSVVWPDRWFLGDFAVVTS
Ga0208565_112197923300027662Peatlands SoilMISQPYVDGITDTVTHAIASSLTAGQIAAGEDTLSVAVVCPDRWFPGDGG
Ga0209446_110764113300027698Bog Forest SoilMVSQLYVDGITDTVPHNIASSLTANQTAADEDTISIWVVCPDRWFFGDFAVVTSRDGLAFAGEVE
Ga0209039_1042128213300027825Bog Forest SoilMQEGTNHGSQSYVDGITDTVPHGIASTPAAGEIAADENALSVAAVGPD
Ga0302224_1036106923300028759PalsaMTAQPYVDGITDTVPHRIASSLAASQIAADQDTISVSVVWPDRWFLGDLAVV
Ga0302218_1012594113300028863PalsaMTAQPYVDGITDTVPHRIASSLAASQIAADQDTISVSVVWPDRW
Ga0310037_1007985913300030494Peatlands SoilMAQPYVDGITDTVAHRIASSLTAGEIAAHEDTVSVSVVCPDRWFLGD
Ga0311372_1007230313300030520PalsaMMSQPYVHGITETLTHDIASSLTAGHIAADGNTLS
Ga0302326_1116675723300031525PalsaMTAQPYVDGITDTVPHRIATRLAASQIAAGEDRISVRVLWPDRWFPGDLAVVTTRDGRAFAG
Ga0318516_1057046413300031543SoilMSQPYVDGITDTVTHNLASSLTAGQITAGQDMLIISVVCPDRWFFGDFAVVTGRDGRAFA
Ga0318538_1028493913300031546SoilMSQPYVDGVTEKASHTFASSLTADLIAADEDWVTISVVCPDRWFLGDFAV
Ga0318574_1091429513300031680SoilMSQPYVDGITDTVTHNLASSLTAGQITAGQDTLTISVVCPDRWFFGDFAVVTG
Ga0318500_1054362913300031724SoilMMSQPYVDGIRDKVSHNFASSLTADQIPADEDKVTISVLCPDRWFLGDFAVVTSRDGGAFAGEVE
Ga0318502_1061540513300031747SoilMMSQPYVNGIADKVSHDFASSLRADLIAVGEDRVIISIVCPDRWFLGDFAVVTSR
Ga0318535_1041724513300031764SoilMMSQPYVDGITDKVPHDFASSLTADQIAADEDQVTISVVCPDRWFLGDFAVVTSRDGLAFAGEV
Ga0318554_1041732413300031765SoilMMSQPYVDGITDKVPHDFASSLTADQIAADEDQVTISVVCPDRWFLGDFAVVTSRDGLAFAGEVE
Ga0318546_1006559623300031771SoilMSQPYVDGITCPVTHNLASSLTAGQITAGQDTLTISVVCPDRWFFGDFAVVTGRDGRAFA
Ga0318576_1046206813300031796SoilMSQPYVDGVTEKASHTFASSLTADLIAADEDWVTISVVCPDRWFLGDFAVVTSRD
Ga0318565_1020750913300031799SoilMSQPYVDGVTEKASHTFASSLTADLIAADEDWVTISVVCPDRWFLGDFAVVTSRDGGAFAGEVA
Ga0318517_1035963223300031835SoilMSQPYVDGITDTVTHNLASSLTAGQITAGQDMLIISVVCPDRWFFGDFAVVTGRDGRAFVGEV
Ga0318551_1038525813300031896SoilMSQPYVDGITDTVTHNLASSLTAGQITAGQDMLIISVVCPDRWFFGDFAVVTGRDGRAFVGEVEA
Ga0306923_1122900213300031910SoilMSQPYVDGITDTVTHNLASSLTAGQITAGQDMLIISVVCPDRWFFGDFAVVTGRDGRAF
Ga0318558_1015025113300032044SoilMMSQPYIDGITDKVSHNIASSLTADLIEADEGWVTIAVVCPDRWFPGDFAV
Ga0318575_1053480513300032055SoilMMSQPYVDGITDKVPHDFASSLTADQIAADEDQVTISVVCPDRWFLGDFAVVTSRDGLAGEREA
Ga0318533_1073756323300032059SoilMSNPYVDGIKDKASHSFASSLIADQIAADEDRVTISVICPDRWFLDDFAVVTSRDGGAFAGKV
Ga0311301_1083659613300032160Peatlands SoilMISQPYVDGITDTVPHDIASSLTAGQIQIAAGQDTLSVAVVSPDRWFPGDFAVVTSRDGH
Ga0311301_1095461733300032160Peatlands SoilMMAQPYVDGITDTVAHSIASSLTAGEIAAYEDTISVSVVWPDRWFLG
Ga0335085_1062534623300032770SoilMISQPYVDGVTDTVAHAIASSLTVGQITAGEDTFSVAAVCPDRWFPGDVRVVTGLPHTPANR
Ga0335080_1201465113300032828SoilMVSQPYVDGITDTVPHGIASSLTAGQIEITAGGTVSVWVICPDRWFPGDLAMVTSRDGRTFAGEVA
Ga0335077_1105816713300033158SoilMVSQPYVDGITDTVPHGIASSLTAGQIAATGDTVSVWVICPDRWFPGDLAMVTSRDGRTF
Ga0335077_1127923823300033158SoilMSQPYVDGINDKVSHNFASPLTAGLIAVGEDLVAISVVCPDRWFPGDFAVVTSRDGGAFA
Ga0370483_0113351_706_8973300034124Untreated Peat SoilMMSQPYVYGITDTLTHDIASSLTAGRIAAEGNTLSVAVVCPDRWFPGDVAVITSRDAARSRPGR


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