Metagenome / Metatranscriptome Family F104152

Overview

Basic Information

• Family ID: F104152
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 100
• Average Sequence Length: 51 residues
• Representative Sequence: MKQFSLLEIISTAVLLAIVVVDLLESSMLLTQLHFKLPTGAHLLLMEC
• Number of Associated Samples: 10
• Number of Associated Scaffolds: 100

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 65.43 %
• % of genes near scaffold ends (potentially truncated): 31.00 %
• % of genes from short scaffolds (< 2000 bps): 63.00 %
• Associated GOLD sequencing projects: 9
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (84.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat (98.000 % of family members)
• Environment Ontology (ENVO): Unclassified (98.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Surface (non-saline) (98.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 53.95%
  β-sheet: 0.00%
  Coil/Unstructured: 46.05%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF13359	DDE_Tnp_4	3.00
PF00069	Pkinase	1.00
PF00134	Cyclin_N	1.00
PF00156	Pribosyltran	1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	4.00

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
All Organisms	root	All Organisms	16.00 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
cellular organisms	root	All Organisms → cellular organisms	12.00 %
Viruses	superkingdom	All Organisms → Viruses	4.00 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	10.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.00 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	10.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.00 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	10.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.00 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	10.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.00 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	10.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.00 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	5.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.00 %
Bacillariophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae	2.00 %
Fragilariophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae	1.00 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.00 %
Bacillariophycidae	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae	2.00 %
Chaetocerotophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Chaetocerotophycidae	1.00 %
Rhizosoleniophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae	1.00 %
Fragilariophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae	1.00 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	2.00 %
Rhabdonematales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae → Rhabdonematales	1.00 %
Leptocylindrales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Chaetocerotophycidae → Leptocylindrales	1.00 %
Naviculales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales	1.00 %
Bacillariales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales	1.00 %
Rhizosoleniales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales	1.00 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2.00 %
Grammatophoraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae → Rhabdonematales → Grammatophoraceae	1.00 %
Leptocylindraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Chaetocerotophycidae → Leptocylindrales → Leptocylindraceae	1.00 %
Naviculaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae	1.00 %
Bacillariaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	1.00 %
Rhizosoleniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae	1.00 %

Level 12

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2.00 %
Fistulifera	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera	1.00 %
Proboscia	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia	1.00 %
Grammatophora	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae → Rhabdonematales → Grammatophoraceae → Grammatophora	1.00 %
Leptocylindrus	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Chaetocerotophycidae → Leptocylindrales → Leptocylindraceae → Leptocylindrus	1.00 %
Bacillariaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	1.00 %

Level 13

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2.00 %
Fistulifera solaris	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris	1.00 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1.00 %
Grammatophora oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae → Rhabdonematales → Grammatophoraceae → Grammatophora → Grammatophora oceanica	1.00 %
Leptocylindrus danicus	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Chaetocerotophycidae → Leptocylindrales → Leptocylindraceae → Leptocylindrus → Leptocylindrus danicus	1.00 %
Bacillariaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	1.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005830|Ga0074473_11012265	Not Available	695
3300015360|Ga0163144_10059353	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	6637
3300015360|Ga0163144_10059874	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	6597
3300015360|Ga0163144_10103421	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	4502
3300015360|Ga0163144_10112085	Not Available	4250
3300015360|Ga0163144_10210551	Not Available	2677
3300015360|Ga0163144_10258753	Not Available	2291
3300015360|Ga0163144_10374493	Not Available	1726
3300015360|Ga0163144_10376280	Not Available	1720
3300015360|Ga0163144_10576989	Not Available	1230
3300015360|Ga0163144_10583362	Not Available	1219
3300015360|Ga0163144_10771898	Not Available	978
3300015360|Ga0163144_10776006	Not Available	974
3300015360|Ga0163144_11200587	Not Available	697
3300015360|Ga0163144_11240058	Not Available	680
3300015360|Ga0163144_11257634	Not Available	673
3300015360|Ga0163144_11401411	Not Available	622
3300015360|Ga0163144_11695438	Not Available	542
3300020057|Ga0163151_10109826	Not Available	1781
3300020057|Ga0163151_10147946	All Organisms → Viruses → Predicted Viral	1450
3300020057|Ga0163151_10236164	All Organisms → Viruses → Predicted Viral	1038
3300020057|Ga0163151_10303597	Not Available	862
3300020057|Ga0163151_10429349	Not Available	662
3300020057|Ga0163151_10439828	Not Available	650
3300020057|Ga0163151_10505946	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	582
3300020057|Ga0163151_10526589	Not Available	564
3300020057|Ga0163151_10555077	Not Available	541
3300020192|Ga0163147_10164048	All Organisms → Viruses → Predicted Viral	1342
3300020192|Ga0163147_10167852	Not Available	1320
3300020192|Ga0163147_10208761	Not Available	1123
3300020192|Ga0163147_10219240	Not Available	1083
3300020192|Ga0163147_10345344	Not Available	768
3300020192|Ga0163147_10430791	Not Available	646
3300020192|Ga0163147_10442083	Not Available	634
3300020192|Ga0163147_10475576	Not Available	598
3300020192|Ga0163147_10483136	Not Available	590
3300020201|Ga0163154_10141089	Not Available	1372
3300020201|Ga0163154_10339974	Not Available	704
3300020201|Ga0163154_10475767	Not Available	545
3300020203|Ga0163148_10011441	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	7710
3300020203|Ga0163148_10024077	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	4766
3300020203|Ga0163148_10035512	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	3733
3300020203|Ga0163148_10044495	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Chaetocerotophycidae → Leptocylindrales → Leptocylindraceae → Leptocylindrus → Leptocylindrus danicus	3224
3300020203|Ga0163148_10054063	Not Available	2833
3300020203|Ga0163148_10069263	Not Available	2396
3300020203|Ga0163148_10084325	Not Available	2096
3300020203|Ga0163148_10089964	Not Available	2002
3300020203|Ga0163148_10091503	Not Available	1979
3300020203|Ga0163148_10105158	Not Available	1793
3300020203|Ga0163148_10153521	Not Available	1364
3300020203|Ga0163148_10217493	Not Available	1054
3300020203|Ga0163148_10219344	Not Available	1047
3300020203|Ga0163148_10227701	Not Available	1018
3300020203|Ga0163148_10229908	Not Available	1011
3300020203|Ga0163148_10264518	Not Available	910
3300020203|Ga0163148_10314985	Not Available	797
3300020203|Ga0163148_10413264	Not Available	647
3300020203|Ga0163148_10486019	Not Available	570
3300020203|Ga0163148_10535176	Not Available	528
3300020219|Ga0163146_10093742	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	2112
3300020219|Ga0163146_10115485	Not Available	1836
3300020219|Ga0163146_10126395	Not Available	1728
3300020219|Ga0163146_10142887	Not Available	1591
3300020219|Ga0163146_10194019	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae → Rhabdonematales → Grammatophoraceae → Grammatophora → Grammatophora oceanica	1287
3300020219|Ga0163146_10194554	Not Available	1285
3300020219|Ga0163146_10455655	Not Available	687
3300020219|Ga0163146_10667671	Not Available	511
3300020596|Ga0163149_10015720	Not Available	6817
3300020596|Ga0163149_10031247	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	4384
3300020596|Ga0163149_10046374	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris	3395
3300020596|Ga0163149_10111823	Not Available	1890
3300020596|Ga0163149_10123422	All Organisms → Viruses → Predicted Viral	1766
3300020596|Ga0163149_10133811	Not Available	1668
3300020596|Ga0163149_10139008	Not Available	1624
3300020596|Ga0163149_10251699	Not Available	1049
3300020596|Ga0163149_10374652	Not Available	768
3300020596|Ga0163149_10417001	Not Available	704
3300020596|Ga0163149_10464407	Not Available	645
3300020596|Ga0163149_10595740	Not Available	523
3300022222|Ga0226658_10418591	Not Available	599
3300022373|Ga0210319_1035181	Not Available	500

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	98.00%
Marine	Environmental → Aquatic → Marine	1.00%
Sediment	Environmental → Aquatic → Sediment	1.00%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	98.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.00%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	98.00%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.00%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	98.00%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.00%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.00%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental
3300020192	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP6.G1	Environmental
3300020201	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP9.P1	Environmental
3300020203	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP7.P2	Environmental
3300020219	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP7.G1	Environmental
3300020596	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.G1	Environmental
3300022222	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2)	Environmental
3300022373	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.180 (Metagenome Metatranscriptome)	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0074473_110122652	3300005830	Sediment (Intertidal)	AYLMKQFSLIEIISTAVLLAILVVDLLESSMLLTQLHFNLFTGAHLLLMEY*
Ga0163144_100460422	3300015360	Freshwater Microbial Mat	MKQFSLLEVVSTVVLHASCVVVDLLESSMLLTQLHFKPPTAAHLLLMEC*
Ga0163144_100593533	3300015360	Freshwater Microbial Mat	VMKQFSLIEIISTCSAASYVVVDLSRESSMLLTELHFNVPTGAHLPLMEC*
Ga0163144_100598743	3300015360	Freshwater Microbial Mat	VKQISLLEIVSTAALLAMVVVVVVDLLESSMLLTQLHFKLPTGAHMPLMEH*
Ga0163144_1010342110	3300015360	Freshwater Microbial Mat	MKQFSLLEIISTAVLLANVVVVDLLESSMLLTQLHFNLLTGAHLLLMEC*
Ga0163144_101120855	3300015360	Freshwater Microbial Mat	MKQFSLLEIISTVVLLAIVVVDLLESSMPLTQLHFKLPTGAHLLLMEY*
Ga0163144_102105513	3300015360	Freshwater Microbial Mat	VMKQFSLLEIISTVVLLAIVVVDLLESSMPLTQLHFKLPTGSPLLLMEY*
Ga0163144_102276551	3300015360	Freshwater Microbial Mat	MRDLLVVQKISLIEITSTAVLLANVVVVVVDLLEPSMSLTQLHFKLPTGAHLLLVEC*
Ga0163144_102587534	3300015360	Freshwater Microbial Mat	MKQFSLLEIICTAVLLAIVVVDLLESSMLLTKLHFKLPTGAHLLLMEC*
Ga0163144_103744931	3300015360	Freshwater Microbial Mat	MRDLLVMKQFSLLEIISTAVLLANVVVVVDLLESSMLLTQLHFNLLTGAHLLLMEY*
Ga0163144_103762801	3300015360	Freshwater Microbial Mat	MKQFSLLEIISTVVLLAVVVVDLLESSMLLTQLHFKLLTGAHLLLME
Ga0163144_105769892	3300015360	Freshwater Microbial Mat	MRQFSLIENISTVVLLAIVVVDLLESSMLLTQLHFKLPTGAHLLLMEC*
Ga0163144_105833621	3300015360	Freshwater Microbial Mat	MEQFSLLEIISTVVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLMEY*
Ga0163144_107718981	3300015360	Freshwater Microbial Mat	MKQFSLIEIVSTAVLLAILVVDLPESSMLLTQLHFTGAHLLLMEHWL
Ga0163144_107760061	3300015360	Freshwater Microbial Mat	YLMKQFNLIEIISTVVLLLAMVVDLLESSMLLTQLHFHLFIGAHLPLMEH*
Ga0163144_110556151	3300015360	Freshwater Microbial Mat	MLDEETCLMKQFSLLEITSAVVLLAVLLLLLQIFLESSMSLTQLHFKLPTGAHMPL
Ga0163144_111703822	3300015360	Freshwater Microbial Mat	VVQKISLLEIISTVVLLAMVVESSMLLAKLHFKLPTGAHLLL
Ga0163144_112005871	3300015360	Freshwater Microbial Mat	MIRDLLVVQKISLLEIISTAVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLMEH
Ga0163144_112400582	3300015360	Freshwater Microbial Mat	QFSLLEIASTAVLPANVVVVVVDLLESSMLLTQLHFNLPTGAHMPLMEH*
Ga0163144_112576341	3300015360	Freshwater Microbial Mat	LLVMKQFSLLEIISTVVLLAIVVVDLLESSMLLTQLHFKLPTGAHMPLMEY*
Ga0163144_114014111	3300015360	Freshwater Microbial Mat	MLCDNCWRRDLLVVQKISYVEIISTTVLLATVVVDLSRVFQLLTQLHFNLLTGAHLLLMEH*
Ga0163144_116954381	3300015360	Freshwater Microbial Mat	EIISTTVLLATVVVDLSRVFQLLTQLHFNLLTGAHLLLMEC*
Ga0163144_117962281	3300015360	Freshwater Microbial Mat	MIKRPACLLKQFSSLEIVSTAALLANVVVVVADLLESSMLLTQLHFKLPTGAHMPL
Ga0163151_101098261	3300020057	Freshwater Microbial Mat	MKQFSLLEIISTAVLLANVVVVVVDLLESSTLLTQLHFNVLTGAHLLLMEYQLHQLHFQQ
Ga0163151_101479463	3300020057	Freshwater Microbial Mat	VMKQFSLIEIISTCSAASYVVVDLSRESSMLLTELHFNVPTGAHLPLMEC
Ga0163151_102361642	3300020057	Freshwater Microbial Mat	FSLIEIISTAVLLANVVVDLLESSMLLTQLHFKLLTGAHMPFMEC
Ga0163151_103035971	3300020057	Freshwater Microbial Mat	VMKQFSLLEIIGTVVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLIEY
Ga0163151_104293492	3300020057	Freshwater Microbial Mat	MIKRSICLLKQISYVDDISTVVLLATVVVDLLESSMLLTQLHFNLFTGAHLPLVEC
Ga0163151_104398282	3300020057	Freshwater Microbial Mat	MKQSSLLEIVSTAVLLANVVVVVVDLPESSMLLTQLHFKLPTGAHMPLMEC
Ga0163151_105059462	3300020057	Freshwater Microbial Mat	MRDLLVMKQFSLLEIISTAVLLANVVVVDLLESSMLLTQLHFNLLTGAHLLLMEY
Ga0163151_105104201	3300020057	Freshwater Microbial Mat	VVQKINLLEIISTVVLLTMVVESSMLLAKLHFKLPTGAHLLLMEC
Ga0163151_105265891	3300020057	Freshwater Microbial Mat	MKQFSLIEIISTAVLLANVVVDLLESSMLLTQLHFKLLTGAHMPFMEC
Ga0163151_105550772	3300020057	Freshwater Microbial Mat	MKQFSLLEIVSAVVLLANVVVVVVDLPESSMPLTQLHFKLPTGAHMPLMEC
Ga0163147_101640484	3300020192	Freshwater Microbial Mat	MKQFSLIEIISTCSAASYVVVDLSRESSMLLTELHFNVPTGAHLPLMEC
Ga0163147_101678521	3300020192	Freshwater Microbial Mat	MEQFSLLEIISTVVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLMEY
Ga0163147_102087612	3300020192	Freshwater Microbial Mat	VVQKISLLEIISTAVLLANVVVVDLLESSMLLTQLHFKLPTGAHMPLMEH
Ga0163147_102192401	3300020192	Freshwater Microbial Mat	MKQFSLLEIISTVVLLAIVVVDLLESSMLLTQLHFKLLTGAHLLLMQY
Ga0163147_102435361	3300020192	Freshwater Microbial Mat	VVQKISLIEIISTVVLLAMVVESSMLLAKLHFKLPTGAHLLLMEY
Ga0163147_103453442	3300020192	Freshwater Microbial Mat	LVMKQFSLLEIISTVVLLAIVVVDLLESSMPLTQLHFKLPTGAHLLLMEY
Ga0163147_104307911	3300020192	Freshwater Microbial Mat	MLERSICLLKQISLIEIISTVVLLAMVVESSMLLAKLHFKLPTGAHLLLMEY
Ga0163147_104420831	3300020192	Freshwater Microbial Mat	MIKRSICLLKQISYVDDISTAVLLATVVVDLLESSMLLTQLHFNLFTGAHLPLMEC
Ga0163147_104755761	3300020192	Freshwater Microbial Mat	MLCDNCWRRDLLVVQKISYVEIISTTVLLATVVVDLSRVFQLLTQLHFNLLTGAHLLLME
Ga0163147_104831362	3300020192	Freshwater Microbial Mat	IISTTVLLANVVVVVVVDLLESSMLLTQLHFNLLTGAHLLLMEC
Ga0163154_101410891	3300020201	Freshwater Microbial Mat	VMKQFSLIEIISTAVLLANVVVDLLESSMLLTQLHFKLLTGAHMPFMEC
Ga0163154_103399742	3300020201	Freshwater Microbial Mat	GLRDLLVVQKISLLEIMSTAVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLMEH
Ga0163154_104757671	3300020201	Freshwater Microbial Mat	MIRDLLVVQKISLLEIISTTVLLANVVVVVVDLLESSMLLTQLHFNLLTGAHLLLMEC
Ga0163148_100114418	3300020203	Freshwater Microbial Mat	MKQFSLLEIISTAVLLAIVVVDLLESSMLLTQLHFKLPTGAHLLLMEC
Ga0163148_100240771	3300020203	Freshwater Microbial Mat	LEIVSTVVLLANVVVVVVDLPESSMLLTQLHFKLPTGAHLLLMEH
Ga0163148_100355121	3300020203	Freshwater Microbial Mat	MKQFSLLEIISTAVLLANVVVVDLLESSMLLTQLHFNLLTGAHLLLMEC
Ga0163148_100373665	3300020203	Freshwater Microbial Mat	VVKQISSLEIISTAALLANVVVVVALQIFLESSMSLTQLHFKLPTGAHMPLVEC
Ga0163148_100444954	3300020203	Freshwater Microbial Mat	MKQFSLLEIISTVVLLAIVVVDLLESSMPLTQLHFKLPTGSPLLLMEY
Ga0163148_100540632	3300020203	Freshwater Microbial Mat	MKQFSLLEIICTAVLLAIVVVDLLESSMLLTKLHFKLPTGAHLLLMEC
Ga0163148_100648614	3300020203	Freshwater Microbial Mat	MLDEETCLMKQFSLLEITSAVVLLAVLLLLLQIFLESSMSLTQLHFKLPTGAHMPLLEC
Ga0163148_100692633	3300020203	Freshwater Microbial Mat	VMKQFSLLEIISTAVLLANVVVVVDLLESSMLLTQLHFNLLTGAHLLLMEY
Ga0163148_100843252	3300020203	Freshwater Microbial Mat	VMKQFSLIEIISTAVLLANVVVDLLESSMLLTQLHFKLLTGAHMPFMEY
Ga0163148_100899644	3300020203	Freshwater Microbial Mat	VVQKISLLEIVSTAVLLANVVVVVVDLLESSMLLTQLHFKLPIGAHMPLAEC
Ga0163148_100915031	3300020203	Freshwater Microbial Mat	LLVVQKISLLEIISTVVLLANVVVVVADLLESSMLLTQLHFKLPAGAHMPLMEY
Ga0163148_101051583	3300020203	Freshwater Microbial Mat	MMRDLLVMKQFSLIEIISTATVLLAMVVESSRVFHAAVLTQLHFKLLTGAHLLLMEC
Ga0163148_101535212	3300020203	Freshwater Microbial Mat	VVQKISLIEIVSTAVLLANVVVVVVDLPESSMSLTQLHFKLPTGAHMPLMEC
Ga0163148_101647721	3300020203	Freshwater Microbial Mat	ITSTAVLLANVVVVVVDLLEPSMSLTQLHFKLPTGAHLLLVEC
Ga0163148_102174932	3300020203	Freshwater Microbial Mat	MLDEETCLLMKQFSLLEIASTAVLPANVVVVVVDLLESSMLLTQLHFNLPTGAHMPLMEH
Ga0163148_102193441	3300020203	Freshwater Microbial Mat	VMKQFSLLEIISTVVLLAIVVVDLLESSMPLTQLHFKLPTGSPLLLM
Ga0163148_102227981	3300020203	Freshwater Microbial Mat	MVVIPGTISVKCWMRDLLVVQKISLTEITSTAVLLANVVVVVVDLTEPSMSLTQLHFKPPTGAHLLLVEH
Ga0163148_102277013	3300020203	Freshwater Microbial Mat	MKQFSLLEIISTVVLLANVVVVVVDLLESSMLLTQLHFKLPTGAH
Ga0163148_102299081	3300020203	Freshwater Microbial Mat	IISTAVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLMEY
Ga0163148_102645181	3300020203	Freshwater Microbial Mat	MKQFSLIEIISTAVLLANVVVDLLESSMLLTQLHFKLLTGAHMPLMEY
Ga0163148_103149852	3300020203	Freshwater Microbial Mat	MKQFSLLEIISTVVLLAIVVVDLLESSMLLTQLHFKLPTGAHMPLMEY
Ga0163148_104132641	3300020203	Freshwater Microbial Mat	MVNIKRPAYLMKQFNLIEIISTVVLLLAMVVDLLESSMLLTQLHFHLFIGAHLPLMEH
Ga0163148_104860191	3300020203	Freshwater Microbial Mat	LLEIISTVVLLANVVVAVVDLLESSMLLTQLHFKLPTGAHMPLMEC
Ga0163148_105351761	3300020203	Freshwater Microbial Mat	IISTAVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLMEC
Ga0163146_100937422	3300020219	Freshwater Microbial Mat	VMKQFSLLEIISTAVLLANVVVVDLLESSMLLTQLHFNLLTGAHLLLMEY
Ga0163146_101154852	3300020219	Freshwater Microbial Mat	MIRDLLVVQKISLLEIISTAVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLMEC
Ga0163146_101263952	3300020219	Freshwater Microbial Mat	VVQKISLTEIISAVVLLANVVVVVVDLLESSMLLTQLCFNLLTGAHLLLMEH
Ga0163146_101428871	3300020219	Freshwater Microbial Mat	MRDLLVMKQFSLLEIISTAVLLANVVVVVDLLESSMLLTQLHFNLLTGAHLLLMEY
Ga0163146_101940192	3300020219	Freshwater Microbial Mat	VVQKISLLEIVSTAVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLMEC
Ga0163146_101945542	3300020219	Freshwater Microbial Mat	MKQFSSMEITSTVVLLAVVVVDLPESSMLLTQLHFKSLTGAHLLLVEC
Ga0163146_104249551	3300020219	Freshwater Microbial Mat	VKQISSLEIVSTVVLLANVVVVVADLLESSMLLTQLHFKLPTGAHLLLVEH
Ga0163146_104312081	3300020219	Freshwater Microbial Mat	MLDERDLLVVQKISLLEIISTVVLLAMVVESSMLLAKLHFKLPTGAHLLLMEC
Ga0163146_104556552	3300020219	Freshwater Microbial Mat	MVQKISLIEIISTAVLLANVVVVVVDLLESSMLLTQLHFNLLTGAHLLLMEH
Ga0163146_105492351	3300020219	Freshwater Microbial Mat	MIRDLLVVQKISLLEIISTVVLLANVVVVVADLLESSMLLTQLHFKLPAGAHMPLMEY
Ga0163146_106184851	3300020219	Freshwater Microbial Mat	MKRSICLVKQISLLEIVSTAAVLLAMVVESLESSMLLAKLHFKLPTGAHLLLME
Ga0163146_106676711	3300020219	Freshwater Microbial Mat	MKQISLLEIISTAVLLANVGVVVVDLLESSMLLTQLHFKLLTGAHLLLMEC
Ga0163149_100157207	3300020596	Freshwater Microbial Mat	MKQFSLLEIISTVVLLAIVVVDLLESSMPLTQLHFKLPTGAHLLLMEY
Ga0163149_100233285	3300020596	Freshwater Microbial Mat	MKQFSLLEVVSTVVLHASCVVVDLLESSMLLTQLHFKPPTAAHLLLMEC
Ga0163149_100312471	3300020596	Freshwater Microbial Mat	MKQFSLLEIISTAVLLAIVVVDLLESSMLLTQLHFKLPTGAHLL
Ga0163149_100463745	3300020596	Freshwater Microbial Mat	MKQFSLIEIISIAVPLAIVVVDLLESSMLLTQLHFNLPP
Ga0163149_100536983	3300020596	Freshwater Microbial Mat	MKRSICLVKQISLLEIVSTAAVLLAMVVESLESSMLLAKLHFKLPTGAHLLLMEH
Ga0163149_101118232	3300020596	Freshwater Microbial Mat	MKQFSLLEIASTAVLPANVVVVVVDLLESSMLLTQLHFNLPTGAHMPLMEH
Ga0163149_101234222	3300020596	Freshwater Microbial Mat	VMRQFSLIENISTVVLLAIVVVDLLESSMLLTQLHFKLPTGAHLLLMEC
Ga0163149_101338112	3300020596	Freshwater Microbial Mat	VMKQFSLLEIISTVVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLIEY
Ga0163149_101390081	3300020596	Freshwater Microbial Mat	LKRPAYLMKQFSLLEIICTAVLLAIVVVDLLESSMLLTKLHFKLPTGAHLLLMEC
Ga0163149_102516992	3300020596	Freshwater Microbial Mat	VVQKISLIEIISTAVLLANVVVVVVDLPESSMPLTQLHFKLPTGAHMPLVEH
Ga0163149_102690832	3300020596	Freshwater Microbial Mat	SLLLSGDNFYMTLERDLLVVQKISHVEIVSTAVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMPLVEC
Ga0163149_103746523	3300020596	Freshwater Microbial Mat	VVQKISYIEIISTTVLLATVVVDLSRVFQLLTQLHFNLLTGAHLLLME
Ga0163149_104170011	3300020596	Freshwater Microbial Mat	VVQKISLLEIMSTAVLLANVVVVVVDLLESSMLLTQLHFKLPTGAHMP
Ga0163149_104413282	3300020596	Freshwater Microbial Mat	MRDLLVVQKISLIEITSTAVLLANVVVVVVDLLEPSMSLTQLHFKLPTGAHLLLVEC
Ga0163149_104644071	3300020596	Freshwater Microbial Mat	MIKRSICLLKQISLLEIISTVVLLANVVVVVVDLLESSMLLTQLHFNLFTGAHLPLMEH
Ga0163149_105957401	3300020596	Freshwater Microbial Mat	ADKCWVKRPPCLMKQFSLLEIKSAAVLLAIVVADLLESSMMQTQPHFELPTAEHLLLMEC
Ga0226658_104185911	3300022222	Freshwater Microbial Mat	MKQFSLLEIISTVVLLAIVVVDLLESSMLLTQLHFKLPTGAHL
Ga0210319_10351811	3300022373	Estuarine	MERSIGLLQKISLIEIISTVVLLAIVVVVDLLESSMLLIQLHFNLFAGAHLPLMEY