Metagenome / Metatranscriptome Family F104094

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104094
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	43 residues
Representative Sequence	MEDNSIQRDKPWRPGDYLRLGPSWDEADPIEDFKPQGVPDGED
Number of Associated Samples	86
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.13 %
% of genes near scaffold ends (potentially truncated)	15.84 %
% of genes from short scaffolds (< 2000 bps)	73.27 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.752 % of family members)
Environment Ontology (ENVO)	Unclassified (37.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.347 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03951	Gln-synt_N	53.47
PF00120	Gln-synt_C	31.68
PF00106	adh_short	3.96
PF06831	H2TH	0.99
PF02308	MgtC	0.99
PF12848	ABC_tran_Xtn	0.99
PF00378	ECH_1	0.99
PF03576	Peptidase_S58	0.99
PF13147	Obsolete Pfam Family	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	53.47
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.98
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.99
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.99
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.20 %
Unclassified	root	N/A	19.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.20 %
Unclassified	root	N/A	19.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.20 %
Unclassified	root	N/A	19.80 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.53 %
Unclassified	root	N/A	19.80 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	44.55 %
Unclassified	root	N/A	19.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	35.64 %
Unclassified	root	N/A	19.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	35.64 %
Unclassified	root	N/A	19.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001086\|JGI12709J13192_1019798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300001089\|JGI12683J13190_1015533	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300001369\|JGI12701J14581_1014715	Not Available	553	Open in IMG/M
3300001545\|JGI12630J15595_10008347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2239	Open in IMG/M
3300001661\|JGI12053J15887_10010855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4989	Open in IMG/M
3300001661\|JGI12053J15887_10026361	All Organisms → cellular organisms → Bacteria	3259	Open in IMG/M
3300002245\|JGIcombinedJ26739_101609792	Not Available	547	Open in IMG/M
3300002557\|JGI25381J37097_1036786	Not Available	827	Open in IMG/M
3300002558\|JGI25385J37094_10000511	All Organisms → cellular organisms → Bacteria	10559	Open in IMG/M
3300002908\|JGI25382J43887_10040837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2521	Open in IMG/M
3300002908\|JGI25382J43887_10067383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1936	Open in IMG/M
3300002909\|JGI25388J43891_1026470	Not Available	975	Open in IMG/M
3300005167\|Ga0066672_10082023	All Organisms → cellular organisms → Bacteria	1931	Open in IMG/M
3300005174\|Ga0066680_10250895	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300005175\|Ga0066673_10293255	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005176\|Ga0066679_10804298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300005177\|Ga0066690_10084296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2015	Open in IMG/M
3300005177\|Ga0066690_10161268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1478	Open in IMG/M
3300005179\|Ga0066684_10009754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4589	Open in IMG/M
3300005445\|Ga0070708_101430634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	645	Open in IMG/M
3300005445\|Ga0070708_101677555	Not Available	591	Open in IMG/M
3300005447\|Ga0066689_10128907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1484	Open in IMG/M
3300005471\|Ga0070698_100000088	All Organisms → cellular organisms → Bacteria	72328	Open in IMG/M
3300005553\|Ga0066695_10888838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	509	Open in IMG/M
3300005555\|Ga0066692_10873103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300005559\|Ga0066700_11140574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	509	Open in IMG/M
3300005566\|Ga0066693_10161109	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005586\|Ga0066691_10269009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1003	Open in IMG/M
3300006034\|Ga0066656_11122504	Not Available	506	Open in IMG/M
3300006173\|Ga0070716_100074403	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300006797\|Ga0066659_11279212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300007255\|Ga0099791_10555329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	560	Open in IMG/M
3300007255\|Ga0099791_10638191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300007265\|Ga0099794_10055340	Not Available	1917	Open in IMG/M
3300007982\|Ga0102924_1020095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4916	Open in IMG/M
3300009012\|Ga0066710_104356973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300009038\|Ga0099829_10337694	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300009038\|Ga0099829_10381919	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300009088\|Ga0099830_10464515	Not Available	1029	Open in IMG/M
3300009088\|Ga0099830_10933623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	718	Open in IMG/M
3300009089\|Ga0099828_10196996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1797	Open in IMG/M
3300009090\|Ga0099827_10014153	All Organisms → cellular organisms → Bacteria	5294	Open in IMG/M
3300009090\|Ga0099827_10832137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300010320\|Ga0134109_10268520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300010335\|Ga0134063_10197509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	946	Open in IMG/M
3300011269\|Ga0137392_10221594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1552	Open in IMG/M
3300012198\|Ga0137364_10003174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	8439	Open in IMG/M
3300012203\|Ga0137399_10019376	All Organisms → cellular organisms → Bacteria	4411	Open in IMG/M
3300012203\|Ga0137399_10431142	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300012918\|Ga0137396_10413263	Not Available	1000	Open in IMG/M
3300012927\|Ga0137416_10433485	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300012944\|Ga0137410_10705356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	841	Open in IMG/M
3300012977\|Ga0134087_10662825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300015193\|Ga0167668_1018372	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300015245\|Ga0137409_10296087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1424	Open in IMG/M
3300018433\|Ga0066667_10596089	Not Available	921	Open in IMG/M
3300018482\|Ga0066669_10233800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1438	Open in IMG/M
3300021046\|Ga0215015_11096318	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300021307\|Ga0179585_1104498	Not Available	780	Open in IMG/M
3300022557\|Ga0212123_10109832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2224	Open in IMG/M
3300022691\|Ga0248483_165902	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300022724\|Ga0242665_10083288	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300025939\|Ga0207665_10078171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2272	Open in IMG/M
3300026277\|Ga0209350_1134732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300026296\|Ga0209235_1036085	All Organisms → cellular organisms → Bacteria	2504	Open in IMG/M
3300026310\|Ga0209239_1155981	Not Available	898	Open in IMG/M
3300026314\|Ga0209268_1015166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2955	Open in IMG/M
3300026317\|Ga0209154_1055704	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300026325\|Ga0209152_10118693	Not Available	1005	Open in IMG/M
3300026326\|Ga0209801_1005191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7214	Open in IMG/M
3300026327\|Ga0209266_1044677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2227	Open in IMG/M
3300026371\|Ga0257179_1002021	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300026548\|Ga0209161_10235207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	973	Open in IMG/M
3300026550\|Ga0209474_10377620	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300026551\|Ga0209648_10037657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4196	Open in IMG/M
3300026551\|Ga0209648_10421318	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300027181\|Ga0208997_1007247	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300027388\|Ga0208995_1011565	Not Available	1502	Open in IMG/M
3300027521\|Ga0209524_1063476	Not Available	776	Open in IMG/M
3300027535\|Ga0209734_1003242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2843	Open in IMG/M
3300027565\|Ga0209219_1109409	Not Available	678	Open in IMG/M
3300027587\|Ga0209220_1001541	All Organisms → cellular organisms → Bacteria	6395	Open in IMG/M
3300027587\|Ga0209220_1007746	All Organisms → cellular organisms → Bacteria	2865	Open in IMG/M
3300027587\|Ga0209220_1009303	All Organisms → cellular organisms → Bacteria	2625	Open in IMG/M
3300027591\|Ga0209733_1024411	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300027610\|Ga0209528_1026561	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300027645\|Ga0209117_1199048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300027651\|Ga0209217_1002738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5810	Open in IMG/M
3300027669\|Ga0208981_1140654	Not Available	614	Open in IMG/M
3300027681\|Ga0208991_1003248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4808	Open in IMG/M
3300027684\|Ga0209626_1015813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1765	Open in IMG/M
3300027727\|Ga0209328_10023999	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300027748\|Ga0209689_1149145	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300027846\|Ga0209180_10131844	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300027846\|Ga0209180_10488353	Not Available	691	Open in IMG/M
3300027862\|Ga0209701_10334467	Not Available	861	Open in IMG/M
3300027882\|Ga0209590_10008777	All Organisms → cellular organisms → Bacteria	4617	Open in IMG/M
3300028536\|Ga0137415_10519501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	999	Open in IMG/M
3300028536\|Ga0137415_11491941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300030975\|Ga0099845_1004357	Not Available	602	Open in IMG/M
3300030975\|Ga0099845_1599421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1274	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.02%
Aquatic	Environmental → Aquatic	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.02%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.31%
Loam	Environmental → Terrestrial → Soil → Loam	28.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.98%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.97%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	22.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.98%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001086	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3	Environmental	Open in IMG/M
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001369	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022691	Soil microbial communities from Calhoun CZO, South Carolina, United States - 60cm depth	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030975	Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12709J13192_10197981	3300001086	Forest Soil	MEDKSVQRDKPWRPGDYLRLGPSWDELEPVEDSKPKGVPDGED*
JGI12683J13190_10155332	3300001089	Forest Soil	MEDNSVHRDKPWRPGDYPPPGPSWDEADPSEEFKPQGVPNGED*
JGI12701J14581_10147152	3300001369	Forest Soil	MEDNSVHRDKPWRPGDYPPPGPSWDEADPIEEFKPQGVPNGED*
JGI12630J15595_100083473	3300001545	Forest Soil	MEYPVRDKPWRPGDYPPPGPSWDEDDRTQTSEPSGVPDGED*
JGI12053J15887_100108554	3300001661	Forest Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEADPIEDFKPQGVPDGED*
JGI12053J15887_100263615	3300001661	Forest Soil	MEDNSIQRDKPWRPGDYPPLGPSWDELEAVEDSKLRGVPDGED*
JGIcombinedJ26739_1016097922	3300002245	Forest Soil	MEDNSVHRDKPWRPGDYPPPGPSWDEADPXEEFKPQGVPNGED*
JGI25381J37097_10367862	3300002557	Grasslands Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEAEPIEDFKPLGVPDG
JGI25385J37094_1000051113	3300002558	Grasslands Soil	MEDNSVQRDKPWRPGDYLRLGPSWEEPEPIEDVRPIGVPDGED*
JGI25382J43887_100408372	3300002908	Grasslands Soil	MEDNSVQRDKPWRPGDYLRLGPSWEEPVPIEDVRPIGVPDGED*
JGI25382J43887_100673834	3300002908	Grasslands Soil	TQKRSTVMEDNSVQRDKPWRPGDYLRLGPSWEEAEPIEDFKPIGVPDGED*
JGI25388J43891_10264702	3300002909	Grasslands Soil	MDDNSIQRDKPWRPGDYLRLGPSWEEPQPIDDVIPLGVPDGED*
Ga0066672_100820232	3300005167	Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEAEPIEDFKPLGVPDGED*
Ga0066680_102508952	3300005174	Soil	MEDNSVQRDKPWRPGDYPRPGPSWDETGPIEDVRPQGVPNGED*
Ga0066673_102932552	3300005175	Soil	MDDNSIQRDKPWRPGDYLRLGPSWQEPPPIEDFKPLGVPDGED*
Ga0066679_108042981	3300005176	Soil	EDKSIRRDKPWRPGDYPPLGPSWDELEPVEDSKPRGVPDGED*
Ga0066690_100842961	3300005177	Soil	MEDNSVQRDKPWRPGDYPRPGPSWDETDPVDDLRPQGVPNGED*
Ga0066690_101612681	3300005177	Soil	KRSTVMEDNSIQRDKPWRPGDYLRLGPSWDEAEPIEDFKPLGVPDGED*
Ga0066684_100097543	3300005179	Soil	MDDNSIQRDKPWRPGDYLRLGPSWEEPQPIEDFKPLGVPDGED*
Ga0070708_1014306341	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEDNSIQRDKPWRPGDYPRLGPSWDETDPIEDLRPQGVPDGED*
Ga0070708_1016775551	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEDKSVPRDKPWRPGDYLRLGPSWDETDPIDDVKPLGVPDGED*
Ga0066689_101289072	3300005447	Soil	MEDNSVQRDKPWRPGDYPRPGPSWDETGPIEDLRPQGVPNGED*
Ga0070698_10000008855	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MEDNSIQRDKPWRPGDYPPLGPSWDEMDPIEDSKPQGVPDGED*
Ga0066695_108888381	3300005553	Soil	QRDKPWRPGDYLRLGPSWQEPPPIEDFKPLGVPDGED*
Ga0066692_108731032	3300005555	Soil	DNSIQRDKPWRPGDYLRLGPSWEEPQPIDDVIPLGVPDGED*
Ga0066700_111405741	3300005559	Soil	MEDKSIRRDKPWRPGDYPPLGPSWDELEPVEDSKPRGVPDGED*
Ga0066693_101611092	3300005566	Soil	MDDNSIQRDKPWRPGDYLRLGPSWEEPQPIEDFKSLGVPDGED*
Ga0066691_102690091	3300005586	Soil	RSNFMEDKSIRRDKPWRPGDYPPLGPSWDELEPVEDSKPRGVPDGED*
Ga0066656_111225041	3300006034	Soil	MDDNSIQRDKPWRPGDYLRLGPSWEEPQPIDDVIPL
Ga0070716_1000744032	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MEDKSVPRDKPWRPGDYLRLGPSWDETDPIEDVKPLGVPDGED*
Ga0066659_112792121	3300006797	Soil	TVMEDNSIQRDKPWRPGDYLRLGPSWEEPQPIDDVIPLGVPDGED*
Ga0099791_105553292	3300007255	Vadose Zone Soil	MEDNSIARDKPWRPGDYPRLGPSWDEADPIEDLKPQGVPDGED*
Ga0099791_106381911	3300007255	Vadose Zone Soil	NSVHRDKPWRPGDYPRPGPSWDEADTIEDVKPLGVPDGED*
Ga0099794_100553401	3300007265	Vadose Zone Soil	MEDNSIARDKPWRPGDYPRLGPSWDEAEPIEDSRPQGVPDGED*
Ga0102924_10200954	3300007982	Iron-Sulfur Acid Spring	MEDSSIQRDKPWRPGDYPRPGPSWDEAAPIESFKPQGVPDGED*
Ga0066710_1043569732	3300009012	Grasslands Soil	MEDNSVQRDKPWRPGDYPRPGPSWDETGPIEDLRPQGVPNGED
Ga0099829_103376942	3300009038	Vadose Zone Soil	MEDNSIQRDKPWRPGDYPRLGPSWDEADPIEDLKPKGVPDGED*
Ga0099829_103819192	3300009038	Vadose Zone Soil	MEDNSVQRDKPWRPGDYLRLGPSWDELEPVEDSKPKGVPDGED*
Ga0099830_104645152	3300009088	Vadose Zone Soil	MEDNSVQRDKPWRPGDYPRLGPSWDEGDPIEDSKPQGVPDGED*
Ga0099830_109336232	3300009088	Vadose Zone Soil	MEDNSIQRDKPWRPGDYPRLGPSWDEADPIEDLRPQGVPDGED*
Ga0099828_101969963	3300009089	Vadose Zone Soil	MEDNSIQRDKPWRPGDYPPLGPSWDELEPVEDSKLAGVPDGED*
Ga0099827_100141533	3300009090	Vadose Zone Soil	MEDNSIQRDKPWRPGDYPRLGPSWDEMDPTEDLKPQGVPDGED*
Ga0099827_108321372	3300009090	Vadose Zone Soil	MEYPVERDKPWRPGDYPRPGPSWDQADTKDSEHQGVPDGED*
Ga0134109_102685202	3300010320	Grasslands Soil	LATQKRRTVMEDNSIQRDKPWRPGDYLRLGPSWQEPPPIEDFKPLGVPDGED*
Ga0134063_101975092	3300010335	Grasslands Soil	MEDNSIQRDKPWRPGDYLRLGPSWEEPQPIDDVIPLGVPDGED*
Ga0137392_102215942	3300011269	Vadose Zone Soil	MEDNSIQRDKPWRPGDYPRLGPSWDEAEPIEDSRPQGVPDGED*
Ga0137364_100031745	3300012198	Vadose Zone Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEAQPIEDFKPLGVPDGED*
Ga0137399_100193762	3300012203	Vadose Zone Soil	MEDNSVHRDKPWRPGDYPRPGPSWDEADTIEDVKPLGVPDGED*
Ga0137399_104311422	3300012203	Vadose Zone Soil	MTAEDPKERDKPWRPGDYPRLGPSWDEADPIEDSKPKGVPDGED*
Ga0137396_104132632	3300012918	Vadose Zone Soil	MEEHPKERDKPWRPGDYPRLGPSWDEAEPIENAEHQGVPDAED*
Ga0137416_104334852	3300012927	Vadose Zone Soil	MEDTSVHRDKPRRPGDYPRPGPSWDEADTIEDVKPLGVPDGED*
Ga0137410_107053561	3300012944	Vadose Zone Soil	NVMEDNSVHRDKPWRPGDYPRPGPSWDEADTIEDVKPLGVPDGED*
Ga0134087_106628251	3300012977	Grasslands Soil	KPWRPGDYLRLGPSWEEPQPIEDFKPLGVPDGED*
Ga0167668_10183722	3300015193	Glacier Forefield Soil	MEDNSIQRDKPWRPGDYPRLGPSWDELEPVEDSKPKGVPDGED*
Ga0137409_102960871	3300015245	Vadose Zone Soil	GRGVNVMEDNSVHRDKPWRPGDYPRPGPSWDEADTIEDVKPLGVPDGED*
Ga0066667_105960892	3300018433	Grasslands Soil	MDDNSIQRDKPWRPGDYLRLGPSWDEAEPIEDFKPLGVPDGED
Ga0066669_102338002	3300018482	Grasslands Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEAQPIEDFKPLGVPDGED
Ga0215015_110963182	3300021046	Soil	MEDNSIQRDKPWRPGDYPQLGPSWDEAEPIEDSRPQGVPDGED
Ga0179585_11044982	3300021307	Vadose Zone Soil	MEDNSVQRDKPWRPGDYLRLGPSWEEAEPIEDFKPIGVPDGED
Ga0212123_101098322	3300022557	Iron-Sulfur Acid Spring	MEDSSIQRDKPWRPGDYPRPGPSWDEAAPIESFKPQGVPDGED
Ga0248483_1659022	3300022691	Soil	MADNSKRRDKPWRPGDYPPLGPSWDQADPTENAEPQGVPDAED
Ga0242665_100832882	3300022724	Soil	MEDNSVPRDKPWRPGDYPRLGPSWDDELEPIEGSKPQGVPDGED
Ga0207665_100781713	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEDKSVPRDKPWRPGDYLRLGPSWDETDPIEDVKPLGVPDGED
Ga0209350_11347322	3300026277	Grasslands Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEAEPIEDFKPLGVPDGED
Ga0209235_10360852	3300026296	Grasslands Soil	MEDNSVQRDKPWRPGDYLRLGPSWEEPEPIEDVRPIGVPDGED
Ga0209239_11559812	3300026310	Grasslands Soil	MDDNSIQRDKPWRPGDYLRLGPSWEEPQPIEDFKPLGVPDGED
Ga0209268_10151663	3300026314	Soil	MDDNSIQRDKPWRPGDYLRLGPSWQEPPPIEDFKPLGVPDGED
Ga0209154_10557042	3300026317	Soil	MEDNSVQRDKPWRPGDYPRPGPSWDETDPVDDLRPQGVPNGED
Ga0209152_101186932	3300026325	Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEAEPIEDFRPLGVPDGED
Ga0209801_10051917	3300026326	Soil	MDDNSIQRDKPWRPGDYLRLGPSWEEPQPIDDVIPLGVPDGED
Ga0209266_10446772	3300026327	Soil	MEDNSVQRDKPWRPGDYPRPGPSWDETGPIEDVRPQGVPNGED
Ga0257179_10020212	3300026371	Soil	MEDNSIARDKPWRPGDYPRLGPSWDEVEPIEDSRPEGVPDGED
Ga0209161_102352072	3300026548	Soil	SIQRDKPWRPGDYLRLGPSWEEPQPIDDVIPLGVPDGED
Ga0209474_103776202	3300026550	Soil	MDDNSIQRDKPWRPGDYLRLGPSWEEPQPIEDFKSLGVPDGED
Ga0209648_100376577	3300026551	Grasslands Soil	MEDNSIKRDKLWRPGDYPRLGPSWDEADPIEDVKPQGVPDGED
Ga0209648_104213182	3300026551	Grasslands Soil	MEDNSIARDKPWRPGDYPRLGPSWDEADPSEDSRPQGVPDGED
Ga0208997_10072471	3300027181	Forest Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEADPIEDFKPQGVPDGED
Ga0208995_10115652	3300027388	Forest Soil	MEDNSIQRDKPWRPGDYPPLGPSWDELEPVEDSKLRGVPDGED
Ga0209524_10634761	3300027521	Forest Soil	MEDSSVQRDKPWRPGDYPRLGPSWDDELEPAEDSKPKGVPDGED
Ga0209734_10032422	3300027535	Forest Soil	MEDNSVQRDKPWRPGDYPPLGPSWDEVDPIENVKPQGVPDGED
Ga0209219_11094092	3300027565	Forest Soil	MEDNSVQRDKPWRPGDYPRLGPSWDDELEPAEDSK
Ga0209220_10015411	3300027587	Forest Soil	MEDNSVQRDKPWRPGDYPRLGPSWDELEPVEDSKPKGVPDGED
Ga0209220_10077462	3300027587	Forest Soil	MEDKSVQRDKPWRPGDYLRLGPSWDELEPVEDSKPKGVPDGED
Ga0209220_10093032	3300027587	Forest Soil	MEDNSVQRDKPWRPGDYPRLGPSWDEVDPIEDVKPQGVPDGED
Ga0209733_10244112	3300027591	Forest Soil	MEDNSVQRDKPWRPGDYPRLGPSWDDELEPAEDSKPKGVPDGED
Ga0209528_10265612	3300027610	Forest Soil	MEDNSIQRDKPWRPGDYPPLGPSWDELDPIENVKPQGVPDGED
Ga0209117_11990482	3300027645	Forest Soil	MEDNSVHRDKPWRPGDYPPPGPSWDEADPSEEFKPQGVPNGED
Ga0209217_10027385	3300027651	Forest Soil	MEDNSVHRDKPWRPGDYPPPGPSWDEADPIEVFKPQGVPDGED
Ga0208981_11406541	3300027669	Forest Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEADPMEDFKPQGVPDGED
Ga0208991_10032487	3300027681	Forest Soil	MEDNSIQRDKPWRPGDYPPLGPSWDELEAVEDSKLRGVPDGED
Ga0209626_10158132	3300027684	Forest Soil	MEYPVRDKPWRPGDYPPPGPSWDEDDRTQTSEPSGVPDGED
Ga0209328_100239992	3300027727	Forest Soil	MEDNSVHRDKPWRPGDYPPPGPSWDEADPIEEFKPQGVPNGED
Ga0209689_11491452	3300027748	Soil	MEDNSIQRDKPWRPGDYLRLGPSWDEAEPIEDLKPLGVPDGED
Ga0209180_101318442	3300027846	Vadose Zone Soil	MEDNSVQRDKPWRPGDYLRLGPSWDELEPVEDSKPKGVPDGED
Ga0209180_104883532	3300027846	Vadose Zone Soil	MEDNSIQRDKPWRPGDYPRLGPSWDEADPIEDLRPQGVPDGED
Ga0209701_103344672	3300027862	Vadose Zone Soil	MEDNSVQRDKPWRPGDYPRLGPSWDEGDPIEDSKPQGVPDGED
Ga0209590_100087774	3300027882	Vadose Zone Soil	MEDNSIQRDKPWRPGDYPRLGPSWDEMDPTEDLKPQGVPDGED
Ga0137415_105195012	3300028536	Vadose Zone Soil	MEDNSVHRDKPWRPGDYPRPGPSWDEADTIEDVKPLGVPDGED
Ga0137415_114919411	3300028536	Vadose Zone Soil	MEEHPKERDKPWRPGDYPRLGPSWDEADPIENAEHQGVPDAED
Ga0099845_10043572	3300030975	Boreal Forest Soil	MEDNSVQRDKPWRPGDYPRLGPSWDDELEPVEDSKPKGVPDGED
Ga0099845_15994212	3300030975	Boreal Forest Soil	MEDNSVQRDKPWRPGDYPRLGPSWGDELEPVEDSKPKGVPDGED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104094

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences