Metagenome Family F104084

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104084
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	81 residues
Representative Sequence	MQEDLSRVRTPNSALVLGMIRRVVLSLSNAAVDKARKKNPKTKFNTKSFRQRFLSARGGRERLQALIFAQHPAVLDLEK
Number of Associated Samples	92
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.00 %
% of genes near scaffold ends (potentially truncated)	41.58 %
% of genes from short scaffolds (< 2000 bps)	66.34 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.297 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (6.931 % of family members)
Environment Ontology (ENVO)	Unclassified (23.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (47.525 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.86% β-sheet: 0.00% Coil/Unstructured: 55.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF14236	DUF4338	25.74
PF01609	DDE_Tnp_1	12.87
PF01408	GFO_IDH_MocA	1.98
PF07586	HXXSHH	0.99
PF16401	DUF5009	0.99
PF13419	HAD_2	0.99
PF00089	Trypsin	0.99
PF00474	SSF	0.99
PF00009	GTP_EFTU	0.99
PF04952	AstE_AspA	0.99
PF01895	PhoU	0.99
PF00150	Cellulase	0.99
PF01936	NYN	0.99
PF13784	Fic_N	0.99
PF16347	DUF4976	0.99
PF03739	LptF_LptG	0.99
PF14559	TPR_19	0.99
PF06782	UPF0236	0.99
PF05697	Trigger_N	0.99
PF13768	VWA_3	0.99
PF03702	AnmK	0.99
PF05717	TnpB_IS66	0.99
PF07635	PSCyt1	0.99
PF13421	Band_7_1	0.99
PF03693	ParD_antitoxin	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	12.87
COG3293	Transposase	Mobilome: prophages, transposons [X]	12.87
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	12.87
COG5421	Transposase	Mobilome: prophages, transposons [X]	12.87
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	12.87
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	12.87
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG0795	Lipopolysaccharide export LptBFGC system, permease protein LptF	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.99
COG2377	1,6-Anhydro-N-acetylmuramate kinase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.99
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.99
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.99
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.30 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.30 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.30 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	50.50 %
Unclassified	root	N/A	29.70 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	50.50 %
Unclassified	root	N/A	29.70 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	40.59 %
Unclassified	root	N/A	29.70 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	40.59 %
Unclassified	root	N/A	29.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.98 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.99 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	37.62 %
Unclassified	root	N/A	29.70 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	1.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.98 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.99 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	37.62 %
Unclassified	root	N/A	29.70 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.98 %
unclassified Syntrophobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae	0.99 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	37.62 %
Unclassified	root	N/A	29.70 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.98 %
Syntrophobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	0.99 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001396\|JGI20175J14863_1006470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1970	Open in IMG/M
3300003541\|JGI20214J51650_10140814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1653	Open in IMG/M
3300004240\|Ga0007787_10116641	Not Available	1259	Open in IMG/M
3300004776\|Ga0007800_10086817	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005451\|Ga0066681_10304632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	975	Open in IMG/M
3300005825\|Ga0074476_1565063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300007072\|Ga0073932_1001902	All Organisms → cellular organisms → Bacteria	35887	Open in IMG/M
3300007521\|Ga0105044_10644946	Not Available	876	Open in IMG/M
3300009032\|Ga0105048_10000036	All Organisms → cellular organisms → Bacteria	156614	Open in IMG/M
3300009083\|Ga0105047_10088289	Not Available	3986	Open in IMG/M
3300009111\|Ga0115026_11001685	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300009167\|Ga0113563_10192370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2018	Open in IMG/M
3300009175\|Ga0073936_10154864	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300009175\|Ga0073936_10516815	Not Available	697	Open in IMG/M
3300009430\|Ga0114938_1107478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1014	Open in IMG/M
3300009455\|Ga0114939_10106371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1189	Open in IMG/M
3300009455\|Ga0114939_10334230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	649	Open in IMG/M
3300009502\|Ga0114951_10070007	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300009617\|Ga0116123_1034216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1519	Open in IMG/M
3300009618\|Ga0116127_1171982	Not Available	534	Open in IMG/M
3300009639\|Ga0116122_1115287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	867	Open in IMG/M
3300009669\|Ga0116148_1244139	Not Available	758	Open in IMG/M
3300009693\|Ga0116141_10197457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1113	Open in IMG/M
3300009708\|Ga0116194_1051295	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300009760\|Ga0116131_1097749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	882	Open in IMG/M
3300009771\|Ga0116155_10036096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2476	Open in IMG/M
3300010339\|Ga0074046_10074622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2210	Open in IMG/M
3300010379\|Ga0136449_100487138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2147	Open in IMG/M
3300011269\|Ga0137392_10107616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2207	Open in IMG/M
3300011444\|Ga0137463_1025480	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300012211\|Ga0137377_11679138	Not Available	557	Open in IMG/M
3300012361\|Ga0137360_11848674	Not Available	510	Open in IMG/M
3300012363\|Ga0137390_11438469	Not Available	632	Open in IMG/M
3300012683\|Ga0137398_10404862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	929	Open in IMG/M
3300012927\|Ga0137416_11802731	Not Available	559	Open in IMG/M
3300012931\|Ga0153915_11325263	Not Available	841	Open in IMG/M
3300013306\|Ga0163162_13393636	Not Available	508	Open in IMG/M
3300014156\|Ga0181518_10015120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5601	Open in IMG/M
3300014160\|Ga0181517_10001128	All Organisms → cellular organisms → Bacteria	30791	Open in IMG/M
3300014160\|Ga0181517_10058638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2342	Open in IMG/M
3300014498\|Ga0182019_10054718	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300014498\|Ga0182019_10105677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1729	Open in IMG/M
3300014502\|Ga0182021_10208673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2283	Open in IMG/M
3300014502\|Ga0182021_10357178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1728	Open in IMG/M
3300014502\|Ga0182021_10468107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1500	Open in IMG/M
3300014502\|Ga0182021_13146073	Not Available	552	Open in IMG/M
3300014654\|Ga0181525_10202469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1084	Open in IMG/M
3300014658\|Ga0181519_10369299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	887	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10132122	Not Available	1701	Open in IMG/M
3300014838\|Ga0182030_10035393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8577	Open in IMG/M
3300015264\|Ga0137403_11300270	Not Available	573	Open in IMG/M
3300017947\|Ga0187785_10118600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1079	Open in IMG/M
3300017988\|Ga0181520_10002931	All Organisms → cellular organisms → Bacteria	30799	Open in IMG/M
3300018002\|Ga0187868_1054192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1701	Open in IMG/M
3300018025\|Ga0187885_10250627	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	809	Open in IMG/M
3300018038\|Ga0187855_10853550	Not Available	531	Open in IMG/M
3300018043\|Ga0187887_10063691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2245	Open in IMG/M
3300018046\|Ga0187851_10872016	Not Available	506	Open in IMG/M
3300018047\|Ga0187859_10595271	Not Available	622	Open in IMG/M
3300018062\|Ga0187784_11474864	Not Available	539	Open in IMG/M
3300020057\|Ga0163151_10058124	Not Available	2740	Open in IMG/M
3300020084\|Ga0194110_10673552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	644	Open in IMG/M
3300020163\|Ga0194039_1311733	Not Available	509	Open in IMG/M
3300021354\|Ga0194047_10274638	Not Available	650	Open in IMG/M
3300021479\|Ga0210410_10141043	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300021605\|Ga0194054_10021329	Not Available	2477	Open in IMG/M
3300022222\|Ga0226658_10327212	Not Available	690	Open in IMG/M
3300025316\|Ga0209697_10191645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1181	Open in IMG/M
3300025579\|Ga0207927_1019373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2100	Open in IMG/M
3300025708\|Ga0209201_1155421	Not Available	744	Open in IMG/M
3300025715\|Ga0209310_1013209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3663	Open in IMG/M
3300025902\|Ga0209202_1079952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1099	Open in IMG/M
3300026981\|Ga0207822_1003257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1944	Open in IMG/M
3300027819\|Ga0209514_10011838	All Organisms → cellular organisms → Bacteria	9065	Open in IMG/M
3300027823\|Ga0209490_10116840	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300027878\|Ga0209181_10010384	All Organisms → cellular organisms → Bacteria	12110	Open in IMG/M
3300027896\|Ga0209777_10140393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2004	Open in IMG/M
3300028283\|Ga0268283_1146032	Not Available	663	Open in IMG/M
3300030002\|Ga0311350_10123923	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300030294\|Ga0311349_10176205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2011	Open in IMG/M
3300031240\|Ga0265320_10043144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2231	Open in IMG/M
3300031726\|Ga0302321_100323807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1656	Open in IMG/M
3300031726\|Ga0302321_102355511	Not Available	621	Open in IMG/M
3300031813\|Ga0316217_10046352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2376	Open in IMG/M
3300031834\|Ga0315290_10237438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1589	Open in IMG/M
3300031902\|Ga0302322_100449986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1488	Open in IMG/M
3300031939\|Ga0308174_10186511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1572	Open in IMG/M
3300032160\|Ga0311301_10382343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2171	Open in IMG/M
3300032173\|Ga0315268_10506522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1191	Open in IMG/M
3300032275\|Ga0315270_10048063	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300032342\|Ga0315286_11697202	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300032397\|Ga0315287_10370834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1694	Open in IMG/M
3300032456\|Ga0335394_10661665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	793	Open in IMG/M
3300032829\|Ga0335070_10752209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	909	Open in IMG/M
3300032895\|Ga0335074_10223841	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2255	Open in IMG/M
3300032954\|Ga0335083_11292621	Not Available	562	Open in IMG/M
3300033414\|Ga0316619_11314059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300034065\|Ga0334827_076884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1150	Open in IMG/M
3300034161\|Ga0370513_021763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1809	Open in IMG/M
3300034282\|Ga0370492_0110123	Not Available	1127	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.09%
Engineered	Engineered	6.93%
Host-Associated	Host-Associated	1.98%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	54.46%
Terrestrial	Environmental → Terrestrial	36.63%
Wastewater	Engineered → Wastewater	6.93%
Plants	Host-Associated → Plants	1.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	49.50%
Soil	Environmental → Terrestrial → Soil	30.69%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	6.93%
Peat	Environmental → Terrestrial → Peat	5.94%
Sediment	Environmental → Aquatic → Sediment	1.98%
Marine	Environmental → Aquatic → Marine	0.99%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.99%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.82%
Lake	Environmental → Aquatic → Freshwater → Lake	16.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.86%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	6.93%
Ice	Environmental → Aquatic → Freshwater → Ice	5.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.94%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.99%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.99%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.99%
Loam	Environmental → Terrestrial → Soil → Loam	0.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	11.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.93%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.94%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	5.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.95%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.99%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.99%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.99%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.93%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	6.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.94%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	5.94%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.96%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.97%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	2.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.98%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.98%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.98%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.99%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.99%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.99%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.99%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.99%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.99%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.99%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.99%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.99%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.99%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.99%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001396	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004776	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005825	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.184_BBB	Environmental	Open in IMG/M
3300007072	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaG	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009032	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05	Environmental	Open in IMG/M
3300009083	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009455	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300009708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU001_MetaG	Engineered	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009771	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC032_MetaG	Engineered	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021605	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-10m	Environmental	Open in IMG/M
3300022222	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2)	Environmental	Open in IMG/M
3300025316	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC030_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025902	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC032_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027823	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes)	Environmental	Open in IMG/M
3300027878	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028283	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_36m	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032456	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly)	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M
3300034161	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_18	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20175J14863_10064702	3300001396	Arctic Peat Soil	MQEDLSRVRTPHSALVLGMIRRVILSLANAAVDKARQQNPKTKFNTKSFRQRYLTARGGRERLHALISAQMPAVLDLDQ*
JGI20214J51650_101408142	3300003541	Wetland	LDITLQEDLSRVRTPNSALVLGMLRRVVLSLSNAAVDDARKANPKSKFNTKSFRQRFLSARGGRERLHALIFAKNPAVLDLHQ*
Ga0007787_101166411	3300004240	Freshwater Lake	EDLSRVRSSNAARVLGMIRRLIVSLSNAAVDRARAKNPKTKHNTKSFRKRLLSAHGGPERLHAMIFAKHPQLCDL*
Ga0007800_100868171	3300004776	Freshwater	SALVLGMIRRVVLSLSNAAVDKARKQNPKSKFNTKSFRQRFLSARGGRERLQALILAQHPAVLDLEG*
Ga0066681_103046321	3300005451	Soil	MLEDLSRVRTPNSALVLGMLRRVVLSLSNAAVDKARKANPKSKFNTKSFRQRFLSSRGGRERLHALI
Ga0074476_15650631	3300005825	Sediment (Intertidal)	MGEDLSRVRTPRSALVLGMVRRVVLSLSNAAVDVARKTNPKTKFNTKKFQQGFRSARGGRERLQALILAKNPTVLDLRK*
Ga0073932_10019021	3300007072	Hot Spring Sediment	MTGPIQGWLVLSMFRRVVLRMANAAVDAERQANPKTKLNTKFFRQCFRSACGGRECLHGLIFAKHPAVLDLGK*
Ga0105044_106449462	3300007521	Freshwater	LQEDLSRARSANSVRVLGMIRRLIVSLANAAVDRARKKNPKTKKNTKSFRKRFTSARGGRERLHAMIFAKNPQLQNL*
Ga0105048_100000361	3300009032	Freshwater	SRVRSANSVRVLGMIRRLIVSLANAAVDRARRKNPKTKKNSKSFRKRFTSARGGRERLHAMIFAKNPQLQDL*
Ga0105047_1008828910	3300009083	Freshwater	SRVRSANSVRVLGMIRRLIVSLANAAVDRARRKNPKTKKNTKSFRKRFTSARGGRERLQAMIFAKNPQLQDL*
Ga0115026_110016851	3300009111	Wetland	SRLHHCLDITLREDQSRVRTPSAARVLGTLRRVVVSLANAAVNRARQKHPKTKCNTGTFQKRFRSARGGRERLHALIFAKSPDVLSLAD*
Ga0113563_101923702	3300009167	Freshwater Wetlands	MQEDFSRVRTPNSALVLGIIRRVVLSLSNAAVDKTRKQHPKTKFNTKSFRQRYLTARGGRERLYALIFAQSPAVLDLE*
Ga0073936_101548641	3300009175	Freshwater Lake Hypolimnion	HCLDVSMQEDLSRVRTPNSALVLGMIRRVVLSLSNAAVDKARKKNPKTKFNTKSFRQRFLSARGGRERLQALIFAQHPAVLDLEK*
Ga0073936_105168152	3300009175	Freshwater Lake Hypolimnion	VRTPNSALVLGMIRRVVLSLSNAAVDKARKKNPKSKFNTKSFRQRFLSARGGRERLQALILAQHPAVLELEG*
Ga0114938_11074781	3300009430	Groundwater	LDITLGEDLSRVRTPNAALVLGMIRRVVLSLSNAAVDRARQVHPKTKFNTKKFQQAFRTARGGRQRLQALIFAKSPAVLDLGK*
Ga0114939_101063711	3300009455	Groundwater	LDITLREDESRVRTPNAARVLGTIRRVVVSLANAAVDRARAQHPKTKHNTRTFQQRFRSARGGRERLQALLFAKRPNVLDL*
Ga0114939_103342302	3300009455	Groundwater	DITLGEDLSRVRTPNAALVLGMIRRVVLSLSNAAVDRARQVHPKTKFNTKKFQQAFRTARGGRQRLQALIFAKSPAVLDLGT*
Ga0114951_100700072	3300009502	Freshwater	MQEDLSRVRTPNSALVLGMIRRVVLSLSNAAVDKARKKNPNTKFNTKSFRQRFLSARGGRERLQALIFAQHPAVLDLEK*
Ga0116123_10342162	3300009617	Peatland	MQEDLRRVRTPNSALVLGMVRRVVLSLSNAAVDEARKQNPKSKCNTKSFRQRFLSARGGRERLQALVFAKNPAVLDLAK*
Ga0116127_11719822	3300009618	Peatland	WVIESRLHHCLDITMQEDLRRVRTPNSALVLGMVRRVVLSLSNAAVDEARKQNPKSKCNTKSFRQRFLSARGGRERLQALVFAKNPAVLDLAK*
Ga0116122_11152871	3300009639	Peatland	MQEDLSRVRTPNSALVLGMVRRVVLSLSNAAVDDARKQNPKSKCNTKSFRQRFLSARGGRERLEALIFAKNPVVLDLAK*
Ga0116148_12441392	3300009669	Anaerobic Digestor Sludge	MQATPFTRVLHEVDDDQVESRLHHCLDITLREDQSRVRTPGAARVLGTIRRVVVSLANAAVNRVRQKNPKTKSNTRSFQMRFRSARGGRQRLRALVFAKSPSLLELHD*
Ga0116141_101974572	3300009693	Anaerobic Digestor Sludge	MQATPFTRVLHEVDDDQVESRLHHCLDITLREDQSRVRTPGAARVLGTIRRVVVSLANAAVNRARQKNPKTKCNTRSFQKRFRSARGGRERLHALVFAKSPSLLDLHD*
Ga0116194_10512952	3300009708	Anaerobic Digestor Sludge	MQATPFTRVLHEVDDDQVESRLHHCLDITLREDQSRVRTPGAARVLGTIRRVVVSLANAAVNRARQKNPKTKSNTRSFQMRFRSARGGRQRLRALVFAKSPSLLELHD*
Ga0116131_10977491	3300009760	Peatland	RVRTPNSALVLGMVRRVVLSLSNAAVDEARKQNPKSKCNTKSFRQRFLSARGGRERLQALVFAKNPAVLDLAK*
Ga0116155_100360962	3300009771	Anaerobic Digestor Sludge	MQATPFTRVLHEVDDDQVESRLHHCLDITLREDQSRVRTPGAARVLGTIRRVVVSLANAAVNRVRQKNPKTKSNTRSFQMRFRSARGGRQRLRTLVFAKSPSLLELHD*
Ga0074046_100746222	3300010339	Bog Forest Soil	MQEDLSRVRTPNSALVLGMLRRVVLSLSNAAVDKARKDNPKSKFNTKGFQQRFRSARGGRERLQALIFAKNPAVLDLAE*
Ga0136449_1004871381	3300010379	Peatlands Soil	MQEDQSRVRTPNSALVLGMIRRVVLSLSNAAADKARKANPKSKFNTKSFRQRFLSARGGRERLHALTFAKYPAILDLQE*
Ga0137392_101076161	3300011269	Vadose Zone Soil	MLEDLSRVRTPNSALLLGMIRRVVLSLSNAAVDKVRKANPKSKFNTKSFRQRFLSACGGRERLHALIFAKSPAVLDLAA*
Ga0137463_10254802	3300011444	Soil	VIESRLHHCLDVTLQEDLSRVRSPKAARVLGMIRRVIVSLANAAVDRARQTQPKTKRNTKSFRQRFLSARGGRERLHALLFAKKPQVLDLQI*
Ga0137377_116791382	3300012211	Vadose Zone Soil	RVRTPNSALVLGMLRRVVLSLSNAALDKARGANPKSKFNTKSFRQRFLSARGGRDRLHALIFAKNPAVLDIAG*
Ga0137360_118486741	3300012361	Vadose Zone Soil	NSALALGMVRRVVLSLANVAVDKARKKNPKYKCNTKSFRQQFLSARGGRQRLHALIHSKHPSVLNLDE*
Ga0137390_114384691	3300012363	Vadose Zone Soil	RVRTPNSALVLGMLRRVVLSLSNAALDKVRRSNPKSKFNTKSFRQRFLSARGGRQRLHALIFAKNPAVLDIAG*
Ga0137398_104048621	3300012683	Vadose Zone Soil	VIESRLHHCLDVTMQEDLSRVRTPNSALVLGMIRRVVLSLSNAAVDKARQANPKSKFNTKSFRQRFLSARGGRERLHALIFAKNPGVLDLEL*
Ga0137416_118027312	3300012927	Vadose Zone Soil	VRTPNSALVLGMLRRVVLSLSNAALDKARGANPKSKFNTKSFRQRFLSARGGRERLHALIFAKNPAVLDIAG*
Ga0153915_113252632	3300012931	Freshwater Wetlands	MQEDLSRVRTPRSALVLGMIRRVVLSLSNAAVDRARKQNSKTKSNTKSFRQRFLSARGGRERLQALIFAQNPAVLDLEG*
Ga0163162_133936362	3300013306	Switchgrass Rhizosphere	RLDVTMGEDLSRVRTPHSALVLGMIRRVLLSLSNAAVDRARQTNPKTKFNTKKFQQSFRSASGGRERLHALIFAKSPAVLGLGK*
Ga0181518_100151203	3300014156	Bog	MQEDLSRVRTPHAALVLGMIRRVVLSLSNAAVDAARKTHPKTKFNTKRFQQSFRSARGGRERLHGLIFAKHPAVLDLGK*
Ga0181517_1000112819	3300014160	Bog	MQDGLSRLCTPDSAWGLGMIRRVVLSLSNAAVDKARKKNPKTKFNTKSFRQRYLTARGGRQRLQALIFAQNPVLLDLDL*
Ga0181517_100586382	3300014160	Bog	MQEDLSRVRTPNSALVLGMLRRVVLSLSNAAVDQARKANPKSKFNTKSFRQRFLSARGGSERLHALIFAKHPAVLDIGV*
Ga0182019_100547183	3300014498	Fen	SALVLGMIRRVVLSLSNAAVDKARKKNPKTKSNTKSFRQRFLSARGGRKRLQALILAQHPAVLDLEG*
Ga0182019_101056772	3300014498	Fen	SALVLGMIRRVVLSLSNAAVDKARKKNPKTKSNTKSFRQRFLSARGGRERLQALILAQSPAVLDLEG*
Ga0182021_102086732	3300014502	Fen	MHEDLSRVRHPNSAFVLGLVRRVVLSLANEAVARARQSNPKSKANTKSFRQHFRSARGGRQRLQSLIHAKLPALLNLES*
Ga0182021_103571781	3300014502	Fen	EDLSRVRTPNAAWVLGMIRRVVLSLSNAAVDKARLKNSKTKSNTKSFRQRFLSARGGRERLQALIFAQHPAVLDLEG*
Ga0182021_104681071	3300014502	Fen	LDVSLQEDFSRVRTPNAALVLGMIRRVVLSLSNAAVDQVRSNNPKTKFNTKSFRQRYLSARGGRERLHALIFAQNPAVLDLE*
Ga0182021_131460731	3300014502	Fen	LHHCLDVSMQEDLSRVRTPRSALVLGMIRRVVLSLSNAAVDKARKKNPKTKSNTKSFRQRFLSARGGRERLQALIFAQHPAVLDLER*
Ga0181525_102024692	3300014654	Bog	MQEDLSRVRTPNSALVLGMLRRVVLSLSNAAADQARKANPKSKFNTKSFRQRFLSARGGSERLHALIFAKHPAVLDIGV*
Ga0181519_103692991	3300014658	Bog	MQEDLSRVRTPNSALVLGMLRRVVLSLSNAAVDKARHQNPKSKFNTKSSRQRYLSARGGSERLQALIFAENPAALDLTE*
(restricted) Ga0172376_101321221	3300014720	Freshwater	QVLGMIRRLVVSLSNAAVDRSRAKNPKTKHNLKSFQKRLLSAHGGRQRLQAMIFAKHPQLRDL*
(restricted) Ga0172376_105325842	3300014720	Freshwater	LGMIRRLVVSLSNAAVDRSRAKNPKTKHNLKSFHKRLLSAHGGRQRLHAMIFAKHPQLRDL*
Ga0182030_100353931	3300014838	Bog	TPRAALVLGMIRRVVLSLANAAVDRARGRNPKTKANTKSFRQRFLSARGGRERLQALLFAQKPARLDLEE*
Ga0137403_113002702	3300015264	Vadose Zone Soil	EDLSRVRTPNAALVLGMVRRVVLSLSNAAVDKARKANPKSKFNTKSFQQRFRSARGGRERLHALIFAKDPAVLELAE*
Ga0187785_101186002	3300017947	Tropical Peatland	MQEDLSRVRTPNSALVLGMIRRVVLSLSNAAVDRARKSNPKTKSNTKSFRQRYLSARGGRERLQALIFAQNPAVLDLEE
Ga0181520_1000293118	3300017988	Bog	MQDGLSRLCTPDSAWGLGMIRRVVLSLSNAAVDKARKKNPKTKFNTKSFRQRYLTARGGRQRLQALIFAQNPVLLDLDL
Ga0187868_10541922	3300018002	Peatland	MQEDLSRVRTPNSALVLGTLRRVVLSLSNAAVDKARQQNPKSEFNTKSFQQRFRSARGGRERLHALIFAKNPAVFDLAK
Ga0187885_102506272	3300018025	Peatland	MQEDLSRVRTPNWALVLGMVRRVVLSLSNAAVDEARKQNPKSKCNTKSFRQRFLSARGGRERLQALVFAKNPAVLDLAK
Ga0187855_108535501	3300018038	Peatland	LSRVRTPHSALVLGMIRRVVLSLSNATADRARKANPKSKFNTKRFQQSFRSARGGRERLHALIFAQHPAVLDLDP
Ga0187887_100636912	3300018043	Peatland	MQEDLSRVRTPNSALVLGMLRRVVLSLSNAAVDKARHQNPKSKFNTKSSRQRYLSARGGSERLQALIFAENPAALDLTE
Ga0187851_108720162	3300018046	Peatland	EDLSRVRTPPAALVLGLIRRVVLSLSNATIDRARKSKFNTRRFQQSFRSARGGRERLHALIFAQHPAVLDLDP
Ga0187859_105952711	3300018047	Peatland	EDLSRVRTPHSALVLGMIRRVVLSLSNATADRARKANPKSKFNTKRFQQSFRSARGGRERLHALIFAQHPAVLDLDP
Ga0187784_114748641	3300018062	Tropical Peatland	MQEDLSRVRTPNSALVLGMIRRVVLSLSNAAVNIARRANPQTKFHTKSFQQRYRSARRERERLRALIFAKQPTVLELNQ
Ga0163151_100581242	3300020057	Freshwater Microbial Mat	HHCLDVTMQEDSSRVRTPNSARVPGMIRRIVLSLANAAVDQARKANPKTKANTKTFRQRFRTAQGGRERLHALIFAKHPDVLDLKK
Ga0194110_106735522	3300020084	Freshwater Lake	VESRLHHCLDITLREDESRVRTPTAARILGTIRRIVRSFANAAVNRARKNNPKSKCNTGTFQSRFKSAHGGRERLHALSHAKLPNVLDL
Ga0194039_13117331	3300020163	Anoxic Zone Freshwater	QEDLRRVRTPRSALVLGMIRRVVLSLSNAAVDKARKKNPKSKFNTKSFRQRFLSARGGRERLQALMLAQHPAVLDLEG
Ga0194047_102746381	3300021354	Anoxic Zone Freshwater	LDVSMQEDLSRVRTPNSALVLGMIRRVVLSLSNAAVDKARKKNPKTKSNTKSFRQRFLSARGGRERLQALMLAQHPAVLDLEG
Ga0210410_101410433	3300021479	Soil	MQEDLSRVRTPNSALVLGMLRRVVLRLSNAAVDKARKANPKSKFNTKSFQQPFLSARGGRERLYALIFAKNPGVLDLEK
Ga0194054_100213291	3300021605	Anoxic Zone Freshwater	LDVSMQEDLSRVRTPNSALVLGMIRRVVLSLSNAAVDKARKKNPKTKFNTKSFRQRFLSARGGRERLQALIFAQHPAVLDLEK
Ga0226658_103272121	3300022222	Freshwater Microbial Mat	CLDVTMQEDSSRVRTPNSARVPGMIRRIVLSLANAAVDQARKANPKTKANTKTFRQRFRTAQGGRERLHALIFAKHPEVLDLRK
Ga0209697_101916452	3300025316	Freshwater Lake Hypolimnion	MQEDLSRVRTPNSALVLGMIRRVVLSLSNAAVDKARKKNPKTKFNTKSFRQRFLSARGGRERLQALIFAQHPAVLDLEK
Ga0207927_10193732	3300025579	Arctic Peat Soil	MQEDLSRVRTPHSALVLGMIRRVILSLANAAVDKARQQNPKTKFNTKSFRQRYLTARGGRERLHALISAQMPAVLDLDQ
Ga0209201_11554211	3300025708	Anaerobic Digestor Sludge	MQATPFTRVLHEVDDDQVESRLHHCLDITLREDQSRVRTPGAARVLGTIRRVVVSLANAAVNRVRQKNPKTKSNTRSFQMRFRSARGGRQRLRALVFAKSPSLLELHD
Ga0209310_10132094	3300025715	Anaerobic Digestor Sludge	MQATPFTRVLHEVDDDQVESRLHHCLDITLREDQSRVRTPGAARVLGTIRRVVVSLANAAVNRARQKNPKTKCNTRSFQKRFRSARGGRERLHALVFAKSPSLLDLHD
Ga0209202_10799521	3300025902	Anaerobic Digestor Sludge	MQATPFTRVLHEVDDDQVESRLHHCLDITLREDQSRVRTPGAARVLGTIRRVVVSLANAAVNRVRQKNPKTKSNTRSFQMRFRSARGGRQRLRTLVFAKSPSLLELHD
Ga0207822_10032571	3300026981	Tropical Forest Soil	MQEDLSRVRTPRSALVLGMIRRVVLSLSNAAVDRARKRNPKTKSNTKSFRQRYLSARGGRERLRALIFAQNPAVLDLEE
Ga0209514_1001183810	3300027819	Groundwater	MHRCSRLTPYPALVLRMRRRVVLSLSNAAVDQARKANPTSKFNTKGFHQRFRSARGGRERLQALIFAKNPTVVDLKK
Ga0209490_101168403	3300027823	Freshwater	ESRLHPCLDITLGEDRSRVRTPRPARILGTLRRIVMSLANTAVDHARSLNPKSKYNTSRFQKRFRSARGGPERLHALIFSKFPNVLDL
Ga0209181_1001038410	3300027878	Freshwater	LQEDLSRARSANSVRVLGMIRRLIVSLANAAVDRARKKNPKTKKNTKSFRKRFTSARGGRERLHAMIFAKNPQLQNL
Ga0209777_101403931	3300027896	Freshwater Lake Sediment	MQEDLSRVRTPNSALVLGMLRRIVLSLSNAAVDKARQANPKSKANTKSFRQRFLSARGGRERLHALIFAKTPEVLDLEK
Ga0268283_11460322	3300028283	Saline Water	MQEDLRRVRTPRSALVLGMIRRVVLSLSNAAVDKARKQNPKSKFNTKSFRQRFLSARGGRERLQALMLAQHPAVLDLEG
Ga0311350_101239232	3300030002	Fen	MHEDLSRVRHPNSAFVLGLVRRIVLSLANEAVARARQANPKSKANTKTFRQQFRSARGGRQRLQALIHAKLPALLTLEA
Ga0311349_101762051	3300030294	Fen	VIESRLHHCLDITMHEDLSRVRHPNSAFVLGLVRRIVLSLANEAVARARQANPKSKANTKTFRQQFRSARGGRQRLQALIHAKLPALLTLEA
Ga0265320_100431442	3300031240	Rhizosphere	MQEDLSRVRTPNSALVLGMLRRVVLSLANAAVDKARQDNPKSKFNTKSFRQRFLCARGGRERLHALIFAKNPVVLNLGI
Ga0302321_1003238071	3300031726	Fen	MHEDLSRVRHPNSAFVLGLVRRIVLSLANEAVARARQANPKSKANTKTFRQQFRSARGGRQRLQALIHAKLPALLT
Ga0302321_1023555112	3300031726	Fen	TMQEDLSRVRTPNSALVLGMLRRVVLSLSNAAVDQARKDNPKSKCNTKSFRQRFLSARGGRYRLHALIFAKNPVVVDLED
Ga0316217_100463521	3300031813	Freshwater	MQEDLSRVRTPNSALVLGMLRRVVLSLSNAAVDKARCQNPKSKFNTKSSRQRYLSARGGRERLQALIFAENPAALDVTE
Ga0315290_102374382	3300031834	Sediment	LDITLREDESRVRTPNAARVLGTIRRVVVSLANAAVDGARAKNPKSKHNPRTFQQRFRSARGGRERLRALLFAKRPDILDL
Ga0302322_1004499862	3300031902	Fen	MQEDLSRVRTPRAALVLGMIRRVVLSLSNAAVDKARKQNPKTKFNTKSFRQSYLSAHGGRERLQALIFAQNPAVLDLE
Ga0308174_101865112	3300031939	Soil	MQEDLSRVRTPNCALVLGMVRRVVLSLANAAVDKARKKNLKSKFNTKSSRQRFLSARGGRERLQALIFAKQPAVLDLEI
Ga0311301_103823432	3300032160	Peatlands Soil	MQEDQSRVRTPNSALVLGMIRRVVLSLSNAAADKARKANPKSKFNTKSFRQRFLSARGGRERLHALTFAKYPAILDLQE
Ga0315268_105065221	3300032173	Sediment	VESRLHHCLDITLREDESRVRTPNAARVLGTIRRVVVSLANAAVDLARAKNPKTKHNTRTFQQRFRSARGGRERLQALIFAKAPKVLDL
Ga0315270_100480632	3300032275	Sediment	LDITLREDQSRVRNPTAARVLGTIRRVVVSLANAAVDQARRKNPKTKCNTGSFQQRFRSACGGRERLQALIFAKSPNVLDLQN
Ga0315286_116972022	3300032342	Sediment	ESRVRTPNAARVLGTIRRVVVSLANAAVDRARTKNPKTKHNTRTFQQRFRSARGGRERLQALIFAKAPQVLDL
Ga0315287_103708342	3300032397	Sediment	MQEDLSRVRTPDSALVLGILRRVVLSLSNAAVDKARQANPKSKFNTKTFRQRFLSARGGRDHLQALIFAKTPAVLEIAG
Ga0335394_106616652	3300032456	Freshwater	LHHCLDITLQEDLSRVRSANSVRVLGMIRRLIVSLANAAVDRARRKNPKTKKNTKSFRKRFTSARGGRERLQAMIFAKNPQLQDL
Ga0335070_107522092	3300032829	Soil	MQEDLSRVRTPRAALVLGMIRRVVLSLANAAVDKVRKQNPKTKFNTKSFRQRYLSARGGRERLQALIFAQNPAVLELER
Ga0335074_102238411	3300032895	Soil	MQEDLSRVRTPNCALVLGMIRRVVLSLSNAAIDHARRRNPKTKSNTKSFRQRYLSARGGRERLQALIFAQSPAVLDLDE
Ga0335083_112926211	3300032954	Soil	LDISLHEDHSRVRTPKLAWVLGIVRRVVLSLSNTAINRARQANPKTKCNTKTFRQQFLSARGGSQRLRGLIFAKTPAILDLAK
Ga0316619_113140591	3300033414	Soil	PNSALVLGMLRRVVLSLSNAAVDNARKANPKSKFNTKSFRQRFLSARGGRERLHALIFAKNPAALDLQQ
Ga0334827_076884_946_1149	3300034065	Soil	VIESRFHHCLDVSMQEDLSRVRTPRAALVLGMIRRVVLSLANAAVDRARGRNPKTKANTKSFRQRFLS
Ga0370513_021763_23_301	3300034161	Untreated Peat Soil	VIESRLHHCLDITMHEDLSRVRHPNSAFVLGLVRRVVLSLANQAVARARQANPKSKANTKSFRQHFRSARGGRQRLQSLIHAKLPALLNLES
Ga0370492_0110123_887_1123	3300034282	Untreated Peat Soil	VVFAATQADRSNTLVLGMLRRVVLSLSNAAVDQARKANPKSKFNTKSFRQRFLSARGGSKRLHALIFAKTPAVLDIEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters